View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4419_low_24 (Length: 308)

Name: NF4419_low_24
Description: NF4419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4419_low_24
NF4419_low_24
[»] chr8 (72 HSPs)
chr8 (59-283)||(37985850-37986077)
chr8 (61-283)||(14128907-14129128)
chr8 (60-283)||(17841645-17841872)
chr8 (62-283)||(20091598-20091823)
chr8 (59-283)||(40779923-40780151)
chr8 (60-283)||(6108028-6108255)
chr8 (62-283)||(34665425-34665649)
chr8 (59-283)||(15187603-15187831)
chr8 (58-283)||(1645757-1645987)
chr8 (60-283)||(3596836-3597063)
chr8 (59-283)||(26041907-26042138)
chr8 (60-283)||(25581034-25581261)
chr8 (59-283)||(32064788-32065017)
chr8 (60-283)||(42754837-42755064)
chr8 (71-283)||(39772608-39772823)
chr8 (72-283)||(32393901-32394114)
chr8 (72-283)||(35353084-35353299)
chr8 (58-283)||(31347569-31347804)
chr8 (60-279)||(10044390-10044618)
chr8 (85-283)||(8453877-8454078)
chr8 (59-283)||(30834849-30835069)
chr8 (62-160)||(24211169-24211267)
chr8 (59-154)||(1503637-1503732)
chr8 (58-283)||(7022021-7022251)
chr8 (62-201)||(38017062-38017201)
chr8 (63-283)||(3890412-3890638)
chr8 (91-283)||(41819594-41819800)
chr8 (60-228)||(30055615-30055786)
chr8 (60-283)||(24844655-24844880)
chr8 (170-283)||(7017771-7017887)
chr8 (170-283)||(24211459-24211575)
chr8 (62-159)||(37132477-37132575)
chr8 (208-280)||(27782064-27782136)
chr8 (208-283)||(15972824-15972899)
chr8 (170-283)||(27835359-27835475)
chr8 (58-150)||(7017651-7017743)
chr8 (64-136)||(27782105-27782178)
chr8 (64-136)||(32064749-32064822)
chr8 (64-136)||(34665386-34665459)
chr8 (64-136)||(17841838-17841911)
chr8 (64-136)||(20091789-20091862)
chr8 (64-136)||(31347770-31347843)
chr8 (64-136)||(40780117-40780190)
chr8 (72-136)||(42755030-42755095)
chr8 (65-136)||(25581227-25581299)
chr8 (72-122)||(1886621-1886672)
chr8 (63-136)||(24844847-24844920)
chr8 (64-136)||(7017853-7017926)
chr8 (72-136)||(7021990-7022055)
chr8 (64-136)||(8453838-8453911)
chr8 (64-136)||(14128868-14128941)
chr8 (64-136)||(15187564-15187637)
chr8 (64-136)||(26042104-26042177)
chr8 (170-254)||(30797114-30797200)
chr8 (64-136)||(32393862-32393935)
chr8 (64-136)||(35353045-35353118)
chr8 (64-136)||(37986043-37986116)
chr8 (72-136)||(30835035-30835099)
chr8 (72-127)||(38016983-38017039)
chr8 (245-283)||(3817914-3817952)
chr8 (91-129)||(3890611-3890649)
chr8 (249-283)||(20091638-20091672)
chr8 (249-283)||(34665575-34665609)
chr8 (91-136)||(3597029-3597074)
chr8 (72-136)||(6108221-6108286)
chr8 (91-136)||(15972865-15972910)
chr8 (64-136)||(27835441-27835514)
chr8 (249-286)||(30834890-30834927)
chr8 (250-283)||(38017014-38017047)
chr8 (99-136)||(39772789-39772826)
chr8 (247-283)||(3890452-3890488)
chr8 (247-283)||(30055708-30055744)
[»] chr3 (49 HSPs)
chr3 (58-280)||(22426138-22426363)
chr3 (58-283)||(33113836-33114066)
chr3 (58-283)||(3137207-3137436)
chr3 (58-283)||(6041927-6042149)
chr3 (58-283)||(3456107-3456336)
chr3 (60-283)||(3574321-3574549)
chr3 (55-283)||(19650690-19650922)
chr3 (60-283)||(3089460-3089689)
chr3 (58-283)||(37216846-37217075)
chr3 (60-283)||(2754760-2754989)
chr3 (54-283)||(48160948-48161182)
chr3 (62-283)||(33145755-33145980)
chr3 (58-283)||(36864825-36865049)
chr3 (60-283)||(37522096-37522323)
chr3 (61-283)||(8320378-8320606)
chr3 (60-201)||(30385529-30385670)
chr3 (58-160)||(34482681-34482783)
chr3 (58-283)||(8361832-8362067)
chr3 (60-283)||(47738148-47738382)
chr3 (60-283)||(9796824-9797051)
chr3 (60-270)||(42297920-42298122)
chr3 (72-283)||(33839574-33839794)
chr3 (58-254)||(40327897-40328104)
chr3 (59-283)||(41224276-41224505)
chr3 (75-283)||(41883031-41883245)
chr3 (170-280)||(30385057-30385170)
chr3 (170-283)||(11347311-11347427)
chr3 (61-269)||(46918959-46919164)
chr3 (60-274)||(24343599-24343820)
chr3 (60-160)||(26612916-26613017)
chr3 (170-283)||(42297396-42297513)
chr3 (208-283)||(34482857-34482932)
chr3 (62-160)||(42921295-42921394)
chr3 (208-283)||(42921186-42921261)
chr3 (64-136)||(2754721-2754794)
chr3 (64-136)||(3137402-3137475)
chr3 (64-136)||(3574515-3574588)
chr3 (64-136)||(6041888-6041961)
chr3 (72-136)||(9797017-9797082)
chr3 (72-136)||(47738117-47738182)
chr3 (64-136)||(33145717-33145789)
chr3 (221-283)||(26612828-26612890)
chr3 (91-136)||(8362033-8362078)
chr3 (64-136)||(11347272-11347345)
chr3 (64-136)||(37217041-37217114)
chr3 (72-136)||(19650888-19650953)
chr3 (64-136)||(30385015-30385088)
chr3 (64-136)||(34482898-34482971)
chr3 (91-136)||(41883211-41883256)
[»] chr7 (41 HSPs)
chr7 (59-283)||(45637755-45637982)
chr7 (57-283)||(3962022-3962251)
chr7 (59-283)||(42611854-42612082)
chr7 (60-283)||(24395015-24395241)
chr7 (59-283)||(48880721-48880949)
chr7 (60-283)||(34482878-34483108)
chr7 (62-283)||(4974532-4974757)
chr7 (60-283)||(30848612-30848839)
chr7 (58-283)||(15329316-15329546)
chr7 (60-283)||(25167651-25167872)
chr7 (58-283)||(15577640-15577872)
chr7 (58-283)||(18037021-18037249)
chr7 (61-283)||(37476876-37477102)
chr7 (50-283)||(42696126-42696364)
chr7 (62-283)||(20009895-20010119)
chr7 (59-160)||(35445567-35445668)
chr7 (69-283)||(29737182-29737406)
chr7 (59-283)||(15238425-15238655)
chr7 (60-160)||(35876414-35876514)
chr7 (208-283)||(35444601-35444676)
chr7 (208-283)||(36790413-36790488)
chr7 (208-283)||(40880739-40880814)
chr7 (64-136)||(4974723-4974796)
chr7 (64-136)||(42611815-42611888)
chr7 (64-136)||(45637716-45637789)
chr7 (64-133)||(15577841-15577911)
chr7 (60-126)||(40880641-40880706)
chr7 (64-136)||(15329277-15329350)
chr7 (64-136)||(34482839-34482912)
chr7 (60-124)||(36790271-36790336)
chr7 (64-136)||(48880915-48880988)
chr7 (91-136)||(15238414-15238459)
chr7 (64-136)||(24394976-24395049)
chr7 (64-136)||(35444562-35444635)
chr7 (249-283)||(4974572-4974606)
chr7 (64-125)||(37477079-37477141)
chr7 (64-136)||(3961983-3962056)
chr7 (72-136)||(18036990-18037055)
chr7 (64-136)||(25167838-25167911)
chr7 (64-136)||(29737143-29737216)
chr7 (64-136)||(36790454-36790527)
[»] chr6 (39 HSPs)
chr6 (58-283)||(33696739-33696969)
chr6 (60-283)||(18365369-18365595)
chr6 (60-283)||(18370633-18370859)
chr6 (60-283)||(17175816-17176043)
chr6 (60-283)||(33695121-33695349)
chr6 (58-283)||(17705262-17705487)
chr6 (57-283)||(32702248-32702478)
chr6 (58-283)||(23290874-23291106)
chr6 (60-283)||(2309218-2309445)
chr6 (54-283)||(28675191-28675424)
chr6 (62-283)||(6031537-6031763)
chr6 (46-283)||(11548370-11548610)
chr6 (101-283)||(6127318-6127506)
chr6 (128-283)||(9752109-9752267)
chr6 (170-283)||(25986973-25987089)
chr6 (91-201)||(18889470-18889580)
chr6 (94-283)||(8515556-8515747)
chr6 (58-160)||(29693615-29693718)
chr6 (61-126)||(34238883-34238948)
chr6 (64-136)||(33695315-33695388)
chr6 (64-136)||(33696700-33696773)
chr6 (60-138)||(582522-582602)
chr6 (64-136)||(6127279-6127352)
chr6 (64-136)||(23291072-23291145)
chr6 (60-114)||(2121004-2121059)
chr6 (64-126)||(8515723-8515786)
chr6 (66-136)||(11548576-11548647)
chr6 (64-126)||(25986934-25986997)
chr6 (64-136)||(17176009-17176082)
chr6 (64-136)||(17705453-17705526)
chr6 (64-136)||(18365561-18365634)
chr6 (64-136)||(18370825-18370898)
chr6 (64-136)||(28675152-28675225)
chr6 (247-283)||(18889683-18889719)
chr6 (64-136)||(18889685-18889757)
chr6 (249-283)||(2309260-2309294)
chr6 (249-283)||(11548426-11548460)
chr6 (249-283)||(29693639-29693673)
chr6 (91-136)||(9752233-9752278)
[»] scaffold0085 (2 HSPs)
scaffold0085 (60-283)||(47893-48119)
scaffold0085 (64-136)||(47854-47927)
[»] chr1 (47 HSPs)
chr1 (58-283)||(44094741-44094969)
chr1 (61-283)||(40215031-40215257)
chr1 (57-283)||(36966500-36966730)
chr1 (60-283)||(25463719-25463946)
chr1 (59-283)||(19015447-19015675)
chr1 (60-283)||(6883530-6883757)
chr1 (60-283)||(25973457-25973677)
chr1 (58-283)||(41876235-41876464)
chr1 (60-283)||(37821629-37821856)
chr1 (58-283)||(51737548-51737777)
chr1 (60-283)||(3559660-3559887)
chr1 (58-283)||(18404485-18404720)
chr1 (60-283)||(9910086-9910315)
chr1 (58-253)||(20304923-20305123)
chr1 (60-283)||(32000061-32000289)
chr1 (58-283)||(27523048-27523277)
chr1 (58-283)||(33786424-33786657)
chr1 (62-283)||(40273745-40273976)
chr1 (62-283)||(44690818-44691051)
chr1 (60-136)||(19722894-19722970)
chr1 (209-283)||(16045746-16045820)
chr1 (58-283)||(10167443-10167672)
chr1 (63-136)||(33786623-33786696)
chr1 (61-132)||(52064373-52064445)
chr1 (210-269)||(34519815-34519874)
chr1 (170-254)||(51621002-51621085)
chr1 (64-136)||(16045786-16045859)
chr1 (64-136)||(40214992-40215065)
chr1 (64-136)||(40273706-40273779)
chr1 (64-136)||(18404446-18404519)
chr1 (64-136)||(25463680-25463753)
chr1 (64-136)||(44094702-44094775)
chr1 (64-136)||(6883491-6883564)
chr1 (64-136)||(9910281-9910354)
chr1 (64-136)||(19015408-19015481)
chr1 (64-136)||(32000255-32000328)
chr1 (64-136)||(36966696-36966769)
chr1 (64-136)||(37821822-37821895)
chr1 (250-283)||(44690859-44690892)
chr1 (97-141)||(52329464-52329508)
chr1 (249-283)||(32000103-32000137)
chr1 (249-283)||(33786468-33786502)
chr1 (249-283)||(40273902-40273936)
chr1 (249-283)||(52329469-52329503)
chr1 (64-136)||(3559621-3559694)
chr1 (72-136)||(44691017-44691082)
chr1 (60-152)||(22157333-22157425)
[»] chr5 (40 HSPs)
chr5 (59-283)||(4892245-4892473)
chr5 (59-283)||(14138711-14138938)
chr5 (60-283)||(8145418-8145643)
chr5 (58-283)||(25398281-25398510)
chr5 (60-283)||(33584124-33584351)
chr5 (59-283)||(37321587-37321815)
chr5 (59-280)||(3521801-3522025)
chr5 (60-283)||(6043307-6043533)
chr5 (60-283)||(2477679-2477906)
chr5 (63-280)||(12850847-12851069)
chr5 (61-283)||(3362821-3363048)
chr5 (81-283)||(11360947-11361153)
chr5 (60-283)||(38899520-38899748)
chr5 (60-283)||(22912852-22913076)
chr5 (102-283)||(4433845-4434029)
chr5 (59-283)||(12614531-12614755)
chr5 (91-283)||(31640767-31640962)
chr5 (59-283)||(17545476-17545707)
chr5 (77-283)||(27481869-27482077)
chr5 (64-136)||(12614721-12614794)
chr5 (64-136)||(22913042-22913115)
chr5 (64-136)||(2477640-2477713)
chr5 (64-136)||(6043499-6043572)
chr5 (72-136)||(8145387-8145452)
chr5 (64-136)||(11361119-11361192)
chr5 (72-131)||(10458409-10458469)
chr5 (64-136)||(3362782-3362855)
chr5 (64-136)||(4433995-4434068)
chr5 (64-136)||(4892206-4892279)
chr5 (91-136)||(17545673-17545718)
chr5 (64-136)||(25398242-25398315)
chr5 (91-136)||(31640928-31640973)
chr5 (64-136)||(38899714-38899787)
chr5 (97-153)||(13664736-13664792)
chr5 (205-236)||(36880267-36880298)
chr5 (249-283)||(22912894-22912928)
chr5 (72-136)||(3521994-3522059)
chr5 (64-136)||(12850805-12850878)
chr5 (64-136)||(33584317-33584390)
chr5 (62-90)||(12614483-12614511)
[»] chr4 (57 HSPs)
chr4 (58-283)||(53123074-53123303)
chr4 (58-283)||(46441887-46442116)
chr4 (59-283)||(21802114-21802344)
chr4 (60-283)||(36073393-36073619)
chr4 (62-283)||(9088913-9089138)
chr4 (58-283)||(31078612-31078841)
chr4 (58-283)||(47290109-47290338)
chr4 (59-283)||(7744906-7745134)
chr4 (59-283)||(10442581-10442811)
chr4 (58-283)||(49387680-49387910)
chr4 (58-283)||(22199304-22199531)
chr4 (59-283)||(44893007-44893235)
chr4 (60-283)||(44893469-44893696)
chr4 (58-283)||(36072990-36073223)
chr4 (58-283)||(4751489-4751719)
chr4 (62-283)||(24128282-24128507)
chr4 (58-283)||(2624880-2625109)
chr4 (59-283)||(50156373-50156600)
chr4 (60-283)||(33530479-33530710)
chr4 (62-283)||(17655473-17655699)
chr4 (70-283)||(23964269-23964487)
chr4 (60-283)||(42671712-42671939)
chr4 (59-283)||(37934735-37934963)
chr4 (62-283)||(24392710-24392942)
chr4 (58-280)||(37219671-37219904)
chr4 (91-280)||(30563255-30563448)
chr4 (57-282)||(11314043-11314255)
chr4 (61-280)||(44744481-44744698)
chr4 (60-126)||(25063369-25063436)
chr4 (171-283)||(36073650-36073765)
chr4 (64-136)||(33530676-33530749)
chr4 (64-136)||(10442777-10442850)
chr4 (64-136)||(31078807-31078880)
chr4 (64-136)||(49387876-49387949)
chr4 (64-136)||(2624841-2624914)
chr4 (64-136)||(7745100-7745173)
chr4 (64-136)||(21802310-21802383)
chr4 (64-136)||(22199265-22199338)
chr4 (64-136)||(24392671-24392744)
chr4 (64-136)||(36072951-36073024)
chr4 (60-152)||(36073256-36073349)
chr4 (64-136)||(46441848-46441921)
chr4 (64-136)||(47290070-47290143)
chr4 (73-136)||(36073731-36073795)
chr4 (64-136)||(53123034-53123108)
chr4 (64-136)||(4751450-4751523)
chr4 (178-254)||(9111337-9111416)
chr4 (64-136)||(24128243-24128316)
chr4 (64-136)||(36073354-36073427)
chr4 (64-136)||(44893430-44893503)
chr4 (66-136)||(42671675-42671746)
chr4 (90-136)||(17655461-17655507)
chr4 (249-283)||(37219825-37219859)
chr4 (99-136)||(9088910-9088947)
chr4 (72-136)||(23964453-23964518)
chr4 (99-136)||(44893201-44893238)
chr4 (64-136)||(50156566-50156639)
[»] scaffold0096 (2 HSPs)
scaffold0096 (60-283)||(41054-41280)
scaffold0096 (64-136)||(41015-41088)
[»] chr2 (41 HSPs)
chr2 (60-283)||(23267857-23268084)
chr2 (63-283)||(31174633-31174856)
chr2 (60-283)||(33380250-33380477)
chr2 (60-283)||(35160800-35161029)
chr2 (60-283)||(9293370-9293598)
chr2 (64-283)||(3989119-3989342)
chr2 (60-283)||(10661930-10662158)
chr2 (58-283)||(13354889-13355120)
chr2 (60-283)||(7475303-7475530)
chr2 (59-283)||(43330955-43331183)
chr2 (91-283)||(21936124-21936321)
chr2 (60-283)||(9723448-9723677)
chr2 (62-283)||(21393483-21393710)
chr2 (100-283)||(14941199-14941388)
chr2 (58-160)||(22592880-22592985)
chr2 (170-283)||(27847675-27847791)
chr2 (172-283)||(22591525-22591639)
chr2 (91-269)||(16767288-16767480)
chr2 (64-136)||(14941354-14941427)
chr2 (58-150)||(34320961-34321042)
chr2 (210-283)||(37335756-37335829)
chr2 (58-254)||(40262529-40262729)
chr2 (64-136)||(9293564-9293637)
chr2 (81-150)||(37335824-37335894)
chr2 (64-136)||(10661891-10661964)
chr2 (64-136)||(21936085-21936158)
chr2 (64-136)||(23268050-23268123)
chr2 (72-136)||(27847644-27847709)
chr2 (72-136)||(31174822-31174887)
chr2 (64-136)||(35160761-35160834)
chr2 (90-135)||(37335744-37335789)
chr2 (60-105)||(39819272-39819317)
chr2 (64-136)||(43330916-43330989)
chr2 (64-136)||(9723409-9723482)
chr2 (16-52)||(3205768-3205804)
chr2 (58-99)||(27847791-27847833)
chr2 (249-283)||(34320994-34321028)
chr2 (64-136)||(7475496-7475569)
chr2 (72-136)||(13354858-13354923)
chr2 (64-136)||(21393676-21393749)
chr2 (64-136)||(33380211-33380284)
[»] scaffold0228 (6 HSPs)
scaffold0228 (58-283)||(25979-26208)
scaffold0228 (58-283)||(16027-16256)
scaffold0228 (127-283)||(8445-8605)
scaffold0228 (72-136)||(8414-8479)
scaffold0228 (72-136)||(15996-16061)
scaffold0228 (72-136)||(25948-26013)
[»] scaffold0204 (2 HSPs)
scaffold0204 (60-283)||(4439-4666)
scaffold0204 (64-136)||(4400-4473)
[»] scaffold0471 (2 HSPs)
scaffold0471 (62-283)||(12885-13110)
scaffold0471 (64-136)||(12846-12919)
[»] scaffold0178 (2 HSPs)
scaffold0178 (60-283)||(11664-11891)
scaffold0178 (64-136)||(11625-11698)
[»] scaffold0665 (2 HSPs)
scaffold0665 (170-283)||(3111-3222)
scaffold0665 (64-136)||(3072-3145)
[»] scaffold0041 (2 HSPs)
scaffold0041 (208-283)||(85469-85544)
scaffold0041 (60-126)||(85577-85642)


Alignment Details
Target: chr8 (Bit Score: 162; Significance: 2e-86; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 59 - 283
Target Start/End: Original strand, 37985850 - 37986077
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37985850 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcccatttattaatctttc 37985949  T
Q  159 atnnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaatcta 255  Q
    ||         ||||||||||||| ||||||||||||||||| | ||  || ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37985950 ataaaaaaaaatacataacacccaccaccccatgatttccggccagactgagattttattggctagcattaatttcaggactatttcttgataaaatcta 37986049  T
Q  256 agggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||    
T  37986050 agggtgattattctgccatgtcattctt 37986077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 61 - 283
Target Start/End: Complemental strand, 14129128 - 14128907
Alignment:
Q  61 gaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat 160  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14129128 gaaaatgctagatatcaagaatgattttataagaaatattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 14129029  T
Q  161 -nnnnnnnnntacataacacccatcaccccatgatttccggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaaggg 259  Q
              ||||||||||||| ||||| ||||||| ||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14129028 aaaaaaaaaatacataacacccaccaccctatgattttcggctgag--attttattggctaacattaatttcaagactatttcttgataaaatctaaggg 14128931  T
Q  260 tgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||    
T  14128930 tgattattctgccatgtcattctt 14128907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 17841645 - 17841872
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17841645 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 17841744  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |          ||||||||||||| |||||||||||||||     |||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  17841745 taaaaaaaagatacataacacccaccaccccatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaatc 17841842  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||    
T  17841843 taagggtgattattctgccatgtcattctt 17841872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 62 - 283
Target Start/End: Original strand, 20091598 - 20091823
Alignment:
Q  62 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat- 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||     
T  20091598 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcata 20091697  T
Q  161 nnnnnnnnntacataacacccatcaccccatgatttccggct---gagaaattttattggctaacattaatttcaggactatttcttgataaaatctaag 257  Q
             ||||||||||||| |||||||||||||||||||     || ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20091698 aaaaaaaaatacataacacccaccaccccatgatttccggctaggctgagattttattggctaacattaatttcaggacgatttcttgataaaatctaag 20091797  T
Q  258 ggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||    
T  20091798 ggtgattattctgccatgtcattctt 20091823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 59 - 283
Target Start/End: Original strand, 40779923 - 40780151
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40779923 aggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 40780022  T
Q  159 at-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    ||          ||||||||| ||| |||||||||||||||     |||||||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  40780023 ataaaaaaaagatacataacatccaccaccccatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaat 40780120  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||||    
T  40780121 ctaagggtgattattctgccatgtcattctt 40780151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 6108028 - 6108255
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  6108028 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 6108127  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |          ||||||||||||| |||||||||||||||     |||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  6108128 taaaaagaagatacataacacccaccaccccatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaatc 6108225  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||    
T  6108226 taagggtgattattctgccatgtcattctt 6108255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 62 - 283
Target Start/End: Complemental strand, 34665649 - 34665425
Alignment:
Q  62 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcatn 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||     
T  34665649 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcata 34665550  T
Q  162 nnnnnnnntacataacacccatcaccccatgatttccggctga---gaaattttattggctaacattaatttcaggactatttcttgataaaatctaagg 258  Q
            ||||||||||||| ||| ||||||||| ||||  |   || ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34665549 aaaaaaaatacataacacccaccactccatgattttcggccaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagg 34665450  T
Q  259 gtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||    
T  34665449 gtgattattctgccatgtcattctt 34665425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 59 - 283
Target Start/End: Complemental strand, 15187831 - 15187603
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  15187831 aggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttc 15187732  T
Q  159 atnnnnnnnnntacataacacccatcaccccatgatttccggc----tgagaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
    ||         ||||||||||||| ||| ||||||||||||||      ||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  15187731 ataaaaaaaaatacataacacccaccactccatgatttccggccaggctagagattttattggctaacattaatttcaagactatttcttgataaaatct 15187632  T
Q  255 aagggtgattattctgccatgtcattctt 283  Q
    |||||| ||||||||||||| ||||||||    
T  15187631 aagggtaattattctgccatatcattctt 15187603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 58 - 283
Target Start/End: Original strand, 1645757 - 1645987
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1645757 aaggaaaatgctagatatcaagaatgattttataagaaagaaccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 1645856  T
Q  158 cat--nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaa 250  Q
    |||           ||||||||||||| |||||||||||||||     |||||||  |||||||| |||||||||||||||| |||||||||||||||||    
T  1645857 cataaaaaaaaaaatacataacacccaccaccccatgatttccgaccaggctgag--attttattagctaacattaatttcaagactatttcttgataaa 1645954  T
Q  251 atctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||| |||||    
T  1645955 atctaagggtgattattctgccatgtctttctt 1645987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 3596836 - 3597063
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3596836 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgatatggcacaataatcacctttagatttcagtctcatttattaatctttca 3596935  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |          ||||||||||||| |||||||||||||||     |||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  3596936 taaaaaaaagatacataacacccaccaccccatgatttccggtcaggctgag--attttattggttaacattaatttcaggactatttcttgataaaatc 3597033  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||| ||||||||||||||||||||||    
T  3597034 taagggtaattattctgccatgtcattctt 3597063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 59 - 283
Target Start/End: Original strand, 26041907 - 26042138
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26041907 aggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 26042006  T
Q  159 at-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgat---aa 249  Q
    ||          ||||||||||||| |||||||||||||||     |||||||  |||||||||| |||||||||||||||||||||||||||||   ||    
T  26042007 ataaaaaaaagatacataacacccaccaccccatgatttccggtcaggctgag--attttattggttaacattaatttcaggactatttcttgataaaaa 26042104  T
Q  250 aatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||| ||||||||||||    
T  26042105 aatctaagggtgattattctgtcatgtcattctt 26042138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 25581034 - 25581261
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  25581034 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacataacacaataatcacctttagatttcagtctcatttattaatctttca 25581133  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |          ||||||||||||| |||||||||||||||     |||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  25581134 taaaaaaaagatacataacacccaccaccccatgatttccggtcaggctgag--attttattggttaacattaatttcaggactatttcttgataaaatc 25581231  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||| |||||||||| |||||||||||||||    
T  25581232 taaaggtgattattttgccatgtcattctt 25581261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 59 - 283
Target Start/End: Complemental strand, 32065017 - 32064788
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  32065017 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttc 32064918  T
Q  159 at--nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaa 251  Q
    ||           |||||||||||||||| ||||||||||||     |||||||  |||||||||| ||||||||||||||| | |||||||||||||||    
T  32064917 ataaaaaaaaagatacataacacccatcagcccatgatttccggccaggctgag--attttattggttaacattaatttcagaattatttcttgataaaa 32064820  T
Q  252 tctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||||    
T  32064819 tctaagggtgattattctgccatgtcattctt 32064788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 42754837 - 42755064
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  42754837 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttca 42754936  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgattt-----ccggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |          ||||||||||||| || ||||||||||     | |||||||  |||||||||| |||||||||||||| ||||||||||||||||||||    
T  42754937 taaaaaaaaaatacataacacccaccatcccatgattttcggccaggctgag--attttattggttaacattaatttcatgactatttcttgataaaatc 42755034  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||    
T  42755035 taagggtgattattctgccatgtcattctt 42755064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 71 - 283
Target Start/End: Original strand, 39772608 - 39772823
Alignment:
Q  71 gatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcatnnnnnnnnn- 169  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  | ||||||||||||||||              
T  39772608 gatatcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtttcgtttattaatctttcataaaaaaaaaa 39772707  T
Q  170 tacataacacccatcaccccatgatttccggctga--gaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattatt 267  Q
    ||||||||||||| || |||||||||||||||||   || ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  39772708 tacataacacccaccatcccatgatttccggctggctgagattttattggctaacattaatttcaagactattttttgataaaatctaagggtgattatt 39772807  T
Q  268 ctgccatgtcattctt 283  Q
    ||||||||||||||||    
T  39772808 ctgccatgtcattctt 39772823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 72 - 283
Target Start/End: Complemental strand, 32394114 - 32393901
Alignment:
Q  72 atatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcatnnnnnnnnnta 171  Q
    ||||||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||         ||    
T  32394114 atatcaagaatgattttataaaaaatatttaagaatgacatg-cacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaata 32394016  T
Q  172 cataacacccatcaccccatgatttccggct-ga--gaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattc 268  Q
    ||||||||| | ||||||||||||| ||||| ||  || ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  32394015 cataacacctaccaccccatgattttcggctagactgagattttattggctaacattaatttcaagactatttcttgataaaatttaagggtgattattc 32393916  T
Q  269 tgccatgtcattctt 283  Q
    |||||||||||||||    
T  32393915 tgccatgtcattctt 32393901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 72 - 283
Target Start/End: Complemental strand, 35353299 - 35353084
Alignment:
Q  72 atatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat-nnnnnnnnnt 170  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| | || ||||||||||||||||||          |    
T  35353299 atatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttaaattttaatctcatttattaatctttcataaaaaaaagat 35353200  T
Q  171 acataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgatta 265  Q
    |||||||||||| |||| ||||||||||     |||||||  |||||||||| |||||||||||||| || |||||||||||||||||||||||||||||    
T  35353199 acataacacccaccacctcatgatttccggccaggctgag--attttattggttaacattaatttcatgattatttcttgataaaatctaagggtgatta 35353102  T
Q  266 ttctgccatgtcattctt 283  Q
    ||||||||||||||||||    
T  35353101 ttctgccatgtcattctt 35353084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 58 - 283
Target Start/End: Original strand, 31347569 - 31347804
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacattt-attaat--c 154  Q
    ||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||  |    
T  31347569 aaggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttaatttattcc 31347668  T
Q  155 tttcat----nnnnnnnnntacataacacccatcaccccatgatttccggc---tgagaaattttattggctaacattaatttcaggactatttcttgat 247  Q
    ||||||             |||||||||||||  ||||||||||||| |||     ||| ||||||||||||||||||||||||||||| ||||||||||    
T  31347669 tttcataaaaaaaaaaaaatacataacacccactaccccatgatttctggcccgacagagattttattggctaacattaatttcaggacaatttcttgat 31347768  T
Q  248 aaaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  31347769 aaaatctaagggtgattattctgccatgtcattctt 31347804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 60 - 279
Target Start/End: Complemental strand, 10044618 - 10044390
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  10044618 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttca 10044519  T
Q  160 t------nnnnnnnnntacataacacccatcaccccatgatttccg-gctga--gaaattttattggctaacattaatttcaggactatttcttgataaa 250  Q
    |               ||||||||| ||| ||| ||||||||||||  | ||  || |||||||||||||||||||||| ||  ||||||||||||||||    
T  10044518 taaaaaaaaaaaaaaatacataacaaccaccactccatgatttccgaccagattgagattttattggctaacattaattccaaaactatttcttgataaa 10044419  T
Q  251 atctaagggtgattattctgccatgtcat 279  Q
    || ||||| ||||||||||| ||||||||    
T  10044418 atttaaggatgattattctgtcatgtcat 10044390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 85 - 283
Target Start/End: Complemental strand, 8454078 - 8453877
Alignment:
Q  85 ttttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcatnnnnnnnnntacataacacccatc 184  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||         ||||||||||||| |    
T  8454078 ttttataagaagaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaagatacataacacccacc 8453979  T
Q  185 accccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcat 279  Q
    || |||| ||||||     |||||||  |||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  8453978 acaccataatttccggccaggctgag--attttattgtgttacattaatttcaggactatttcttgataaaatctaagggtgattattttgtcatgtcat 8453881  T
Q  280 tctt 283  Q
    ||||    
T  8453880 tctt 8453877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 59 - 283
Target Start/End: Original strand, 30834849 - 30835069
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||| |||||||||||||||||||||| |||||||||| |||||||||||| || ||||| |||| ||||||||||||   |||| | ||  |||    
T  30834849 aggaaaatgatagatatcaagaatgattttatcaagaaagattaaagaatgacatgacagaataaccacccttagatttcagtgttatttttcaactttt 30834948  T
Q  158 catnnnnnnnnntacataacacccatcaccccatgatttccggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaag 257  Q
     ||         ||||||||||||| |||||||||||||||   |||||  |||||||| ||||||||||||||||||| |||||||||||||||| |||    
T  30834949 gataaaataaaatacataacacccaccaccccatgatttcc---tgaga--ttttattgactaacattaatttcaggacaatttcttgataaaatcaaag 30835043  T
Q  258 ggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||    
T  30835044 ggtgattattctgccatgtcattctt 30835069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 24211169 - 24211267
Alignment:
Q  62 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat 160  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24211169 aaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 24211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 1503637 - 1503732
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatc 154  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1503637 aggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatc 1503732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 7022251 - 7022021
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||| ||||||||   ||||||||||||||||||||| | |||||||||| || ||||||||||||| ||||||||   ||||    
T  7022251 aaggaaaatgctagatatcaacaatgatttatcaagaaagattcaagaatgacaagtcacaataatcgcccttagatttcagtctcatttattc--cttt 7022154  T
Q  158 catnnnnnnnnn----tacataacacccatcaccccatgatttccggctg---agaaattttattggctaacattaatttcaggactatttcttgataaa 250  Q
    |||             ||||||||||||| ||||||||||||||||||     | | |||||||||||||||||||||||| | || |||||||||||||    
T  7022153 cataaaaaaaaaaaaatacataacacccaccaccccatgatttccggcccgacatagattttattggctaacattaatttcggtacaatttcttgataaa 7022054  T
Q  251 atctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||| ||||||||    
T  7022053 atctaagggtgattattctgccatatcattctt 7022021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 62 - 201
Target Start/End: Complemental strand, 38017201 - 38017062
Alignment:
Q  62 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataa-tcacctttagatttcagtcacatttattaatctttcat 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||| |||||||||||||||||     
T  38017201 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatttacctttagatttcagtctcatttattaatctttca- 38017103  T
Q  161 nnnnnnnnntacataacacccatcaccccatgatttccggc 201  Q
             ||||||||||||| ||||||||||||||||||    
T  38017102 aaaaaaaaatacataacacccaccaccccatgatttccggc 38017062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 63 - 283
Target Start/End: Original strand, 3890412 - 3890638
Alignment:
Q  63 aaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctt----t 157  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||| |||||||| | ||  ||||||||| |||    |    
T  3890412 aaatgctagatatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatcaccattagattttaatcttatttattaaccttaattt 3890511  T
Q  158 catnnnnnnnnntacataacacccatcaccccatgatttccggc--tga-gaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
     ||         ||||||||||||| ||||||||||||| | ||  ||| || ||||||||||||||||||||||||  ||| |||||||||||||||||    
T  3890512 tataaaaaaaa-tacataacacccaccaccccatgattttcagccatgatgagattttattggctaacattaatttcgagacaatttcttgataaaatct 3890610  T
Q  255 aagggtgattattctgccatgtcattctt 283  Q
    || ||||||||||||||||||||||||||    
T  3890611 aa-ggtgattattctgccatgtcattctt 3890638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 91 - 283
Target Start/End: Original strand, 41819594 - 41819800
Alignment:
Q  91 aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcatnnnnnnnnn-----------tacataacac 179  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||| || ||||                    ||||||||||    
T  41819594 aagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacctatcataaaaaaaaaaaaaaaaaaaatacataacac 41819693  T
Q  180 ccatcaccccatgatttccggctgag---aaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgt 276  Q
     || |||||||||||||||||| | |   | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  41819694 acaccaccccatgatttccggccgggctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatat 41819793  T
Q  277 cattctt 283  Q
    |||||||    
T  41819794 cattctt 41819800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 60 - 228
Target Start/End: Complemental strand, 30055786 - 30055615
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||| |||||||||| ||||||    
T  30055786 ggaaaatgctagatattaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagattttagtctcatttattaacctttca 30055687  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgatttccg----gctgagaaattttattggctaacattaat 228  Q
    |          ||||||||| ||| ||||||||||||||||    ||||||  |||||||||||||||||||||    
T  30055686 taaaaaaaaaatacataacatccaccaccccatgatttccggccagctgag--attttattggctaacattaat 30055615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 24844655 - 24844880
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    |||||||| |||||||||| ||||||||||| |||||||||| ||||||| ||||||| |||||||||  |||||||| | ||  | ||||||| |||||    
T  24844655 ggaaaatgttagatatcaataatgattttatcaagaaagatttaagaatggcatggcaaaataatcactcttagattttaatcttaattattaacctttc 24844754  T
Q  159 atnnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    ||         ||||||||||||| ||||| |||||||||     || |||||  ||||||||||||||||||||||| |||| ||||||||||||||||    
T  24844755 ataaaaaaaa-tacataacacccaccaccctatgatttccaatcaggatgaga--ttttattggctaacattaatttcgggacaatttcttgataaaatc 24844851  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||| || ||||||||||||    
T  24844852 taagggtgattatt-tgtcatgtcattctt 24844880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 170 - 283
Target Start/End: Original strand, 7017771 - 7017887
Alignment:
Q  170 tacataacacccatcaccccatgatttccggctg---agaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattat 266  Q
    ||||||||||||| ||||||||||||||||||     ||| ||||||||||||||||||||||| || || ||||||||||||||||||||| |||||||    
T  7017771 tacataacacccaccaccccatgatttccggcccgacagagattttattggctaacattaattttagtacaatttcttgataaaatctaaggatgattat 7017870  T
Q  267 tctgccatgtcattctt 283  Q
    |||||||||||||||||    
T  7017871 tctgccatgtcattctt 7017887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 283
Target Start/End: Original strand, 24211459 - 24211575
Alignment:
Q  170 tacataacacccatcaccccatgatttccggc-----tgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgatt 264  Q
    ||||||||||||| ||||||||||||||||||     |||||  ||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||    
T  24211459 tacataacacccaccaccccatgatttccggccaggctgaga--ttttattggttaacattaatttcaagactatttcttgataaaatttaagggtgatt 24211556  T
Q  265 attctgccatgtcattctt 283  Q
    ||||||||||| |||||||    
T  24211557 attctgccatgccattctt 24211575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 37132477 - 37132575
Alignment:
Q  62 aaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||| |||||||||||||  ||||||||| ||||||    
T  37132477 aaaatgctagatatcaagaatgattttatcaagaaagattcatgaatgacatgacacaataatcacccttagatttcagtcttatttattaacctttca 37132575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 208 - 280
Target Start/End: Original strand, 27782064 - 27782136
Alignment:
Q  208 attttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcatt 280  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  27782064 attttattggctaacattaatttcaagacaatttcttgataaaatctaagggtgattattctgccatgtcatt 27782136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 15972824 - 15972899
Alignment:
Q  208 attttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||    
T  15972824 attttattggctaacattaaattcagaacaatttcttgataaaatctaagggtgattattctgtcatgtcattctt 15972899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 283
Target Start/End: Original strand, 27835359 - 27835475
Alignment:
Q  170 tacataacacccatcaccccatgatttccg-----gctgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgatt 264  Q
    ||||||||||||| || |||||||||||||     |||||||  |||||||||||||||||||||| | ||| |||| || ||||||||||||| |||||    
T  27835359 tacataacacccaccatcccatgatttccgtctaggctgaga--ttttattggctaacattaatttgaagacaattttttaataaaatctaaggatgatt 27835456  T
Q  265 attctgccatgtcattctt 283  Q
    ||| | |||||||||||||    
T  27835457 attttaccatgtcattctt 27835475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 7017651 - 7017743
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttatt 150  Q
    ||||||||||||||||||||||||||||||   |||||| ||| |||||||||||   | |||||||| | ||||||||||||| ||||||||    
T  7017651 aaggaaaatgctagatatcaagaatgatttatcaagaaatatttaagaatgacattttataataatcatccttagatttcagtctcatttatt 7017743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 27782178 - 27782105
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| ||||||||||  ||||||| ||||||||||||| |||||||||||| |||||||||| ||||||||    
T  27782178 aatgctatatatcaagaaatattttatcaagaaagattcaataatgacatggcagaataatcacccttagattt 27782105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 32064749 - 32064822
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  32064749 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 32064822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 34665386 - 34665459
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  34665386 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 34665459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 17841911 - 17841838
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  17841911 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 17841838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 20091862 - 20091789
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| ||||||||||  ||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  20091862 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 20091789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 31347843 - 31347770
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| ||||||||||  ||||| | |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  31347843 aatgctatatatcaagaaatattttctcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 31347770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 40780190 - 40780117
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  40780190 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 40780117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 42755095 - 42755030
Alignment:
Q  72 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  42755095 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 42755030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 25581299 - 25581227
Alignment:
Q  65 atgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||| |||||||||| | |||||  ||||||  |||||||||||||||||| |||||||||||||||||||    
T  25581299 atgctatatatcaagaaagtttttacgaagaaaatttcaagaatgacatggcaaaataatcacctttagattt 25581227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 1886672 - 1886621
Alignment:
Q  72 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataa 122  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| |||||    
T  1886672 atatcaagaatgattttatcaagaaagattcaagaatgacgtggcagaataa 1886621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 24844920 - 24844847
Alignment:
Q  63 aaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||| ||||||||||  ||||||| |||||| |||||||||||||||| || |||||||||| ||||||||    
T  24844920 aaatgctacatatcaagaaatattttattaagaaaaattcaagaatgacatgaca-aataatcacccttagattt 24844847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 7017926 - 7017853
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||| ||| |||||| | |||||| ||||||||||||||||||| |||||||| | ||||||||    
T  7017926 aatgctatatatcatgaaagattttcttaagaaaaattcaagaatgacatggcagaataatcatccttagattt 7017853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 7021990 - 7022055
Alignment:
Q  72 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||| |||||| | |||||| |||||||||||| |||||| |||||||||| ||||||||    
T  7021990 atatcaagaaagattttctcaagaaaaattcaagaatgatatggcagaataatcacccttagattt 7022055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 8453838 - 8453911
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||||||| || |||||||||| ||||||||    
T  8453838 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgacaaaataatcacccttagattt 8453911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 14128868 - 14128941
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| || |||  || ||||||||||||||| |||||||||| ||||||||    
T  14128868 aatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatcacccttagattt 14128941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 15187564 - 15187637
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||| |||||| |||||| ||| ||||||||    
T  15187564 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataattacccttagattt 15187637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 26042177 - 26042104
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||| ||||| |||||||| ||||||  ||||||||||||||| || |||||||||| ||||||||    
T  26042177 aatgctatatattaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 26042104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 254
Target Start/End: Complemental strand, 30797200 - 30797114
Alignment:
Q  170 tacataacacccatcaccccatgatttccggct---gagaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
    ||||||| ||||| ||||| ||||||||||| |   |||||||||||||||||||||| ||||||  |||||||| || |||||||||    
T  30797200 tacataagacccaccaccc-atgatttccggttagggagaaattttattggctaacatcaatttcgagactattttttaataaaatct 30797114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 32393862 - 32393935
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||| ||||    
T  32393862 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 32393935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 35353045 - 35353118
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  35353045 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 35353118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 37986116 - 37986043
Alignment:
Q  64 aatgctagatatcaagaatgattttataagaaagattc-aagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| | ||| |||  ||||||||||||||| |||||||||| ||||||||    
T  37986116 aatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttagattt 37986043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 30835099 - 30835035
Alignment:
Q  72 atatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||| ||||||||   ||| ||||||||||||||||||| |||||||||| || |||||    
T  30835099 atatcaagaaagattttatcgaaaaaattcaagaatgacatggcagaataatcaccctttgattt 30835035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 38016983 - 38017039
Alignment:
Q  72 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacc 127  Q
    |||||||||| |||||||| ||||||  |||||||||||||||||| ||||||||||    
T  38016983 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacc 38017039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 283
Target Start/End: Original strand, 3817914 - 3817952
Alignment:
Q  245 gataaaatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||| ||||| ||||||    
T  3817914 gataaaatctaagggtgattattctgtcatgtaattctt 3817952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 3890649 - 3890611
Alignment:
Q  91 aagaaagattcaagaatgacatggcacaataatcacctt 129  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  3890649 aagaaaaattcaagaatgacatggcagaataatcacctt 3890611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 20091672 - 20091638
Alignment:
Q  249 aaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||| |||||||||||||||    
T  20091672 aaatctaagggtgattattgtgccatgtcattctt 20091638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 34665575 - 34665609
Alignment:
Q  249 aaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||| |||||||||||||||    
T  34665575 aaatctaagggtgattattgtgccatgtcattctt 34665609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 3597074 - 3597029
Alignment:
Q  91 aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||||||||||| |||||| ||| ||||||||    
T  3597074 aagaaagtttcaagaatgacatggcagaataattacccttagattt 3597029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 6108286 - 6108221
Alignment:
Q  72 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||| |||||| | ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  6108286 atatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatcacccttagattt 6108221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 15972910 - 15972865
Alignment:
Q  91 aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||| |||||||||||| || |||||||||| ||||||||    
T  15972910 aagaaagattgaagaatgacatgacagaataatcacccttagattt 15972865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 27835514 - 27835441
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| ||||||| || ||| |||| |||||| ||||||||||||||||| | |||||||| | ||||||||    
T  27835514 aatgctatatatcaataaagatcttattaagaaaaattcaagaatgacatggtaaaataatcatccttagattt 27835441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 286
Target Start/End: Complemental strand, 30834927 - 30834890
Alignment:
Q  249 aaatctaagggtgattattctgccatgtcattctttaa 286  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  30834927 aaatctaagggtggttattctgtcatgtcattctttaa 30834890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 38017047 - 38017014
Alignment:
Q  250 aatctaagggtgattattctgccatgtcattctt 283  Q
    |||| |||||||||||||||||||||||||||||    
T  38017047 aatccaagggtgattattctgccatgtcattctt 38017014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 39772826 - 39772789
Alignment:
Q  99 ttcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  39772826 ttcaagaatgacatggcagaataatcacccttagattt 39772789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 3890488 - 3890452
Alignment:
Q  247 taaaatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||| ||||||||||||||||| ||||||||    
T  3890488 taaaatctaatggtgattattctgccatatcattctt 3890452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 283
Target Start/End: Original strand, 30055708 - 30055744
Alignment:
Q  247 taaaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||| || ||||||||||||    
T  30055708 taaaatctaagggtgattattgtgtcatgtcattctt 30055744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 160; Significance: 3e-85; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 58 - 280
Target Start/End: Original strand, 22426138 - 22426363
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  22426138 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacatttagatttcagtctcatttattaatcttt 22426237  T
Q  158 catnnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
    |||         ||||||||||||| ||||||||||||||||| | ||  |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22426238 cataaaaaaaaatacataacacccaccaccccatgatttccggccagactgaaattttattggctaacattaatttcaagactatttcttgataaaatct 22426337  T
Q  255 aagggtgattattctgccatgtcatt 280  Q
    ||||||||||||||||||||||||||    
T  22426338 aagggtgattattctgccatgtcatt 22426363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 33114066 - 33113836
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  33114066 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatcttt 33113967  T
Q  158 cat--nnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    |||           ||||||||||||| ||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33113966 cataaaaaaaaaaatacataacacccaccaccccatgatttccggccagactgaaattttattggctaacattaatttcaggactatttcttgataaaat 33113867  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||| ||||||    
T  33113866 ctaagggtgattattctgccatgtaattctt 33113836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 58 - 283
Target Start/End: Original strand, 3137207 - 3137436
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3137207 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 3137306  T
Q  158 cat-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaa 251  Q
    |||          |||||||||||||||||||||||||||||     |||||||  |||||||||| |||||||||||||||||||||||||||||||||    
T  3137307 catacaaaaaagatacataacacccatcaccccatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaa 3137404  T
Q  252 tctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||| |||||||||||||||    
T  3137405 tctaagggtgattattttgccatgtcattctt 3137436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 6042149 - 6041927
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  6042149 aaggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaattttt 6042050  T
Q  158 catnnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    |||          | |||||| ||| |||||||||||||||     |||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  6042049 cataaaa------aaataacaaccaccaccccatgatttccggtcaggctgag--attttattggctaacattaatttcaggactatttcttgataaaat 6041958  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||| ||||||||||||    
T  6041957 ctaagggtgattattctgtcatgtcattctt 6041927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 3456336 - 3456107
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||| |||||||||||||||    
T  3456336 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacactaatcatctttagatttcagtctcatttattaatcttt 3456237  T
Q  158 cat-nnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |||          ||||||||||||| ||||||||||||||||| | ||  || |||||||||| ||||||||||| |||||||||||||||||||||||    
T  3456236 cataaaaaaaaaatacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaattccaggactatttcttgataaaatc 3456137  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||| ||||||||    
T  3456136 taagggtgattattctgccatatcattctt 3456107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 3574321 - 3574549
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||    
T  3574321 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctctagatttcagtctcatttattaatctttca 3574420  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgatttccggctga---gaaattttattggctaacattaa-tttcaggactatttcttgataaaatct 254  Q
    |          ||||||||||||| ||||||||||||||||||  |   || |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  3574421 taaaaaaaaaatacataacacccaccaccccatgatttccggccaagctgagattttattggctaacattaattttcaagactatttcttgataaaatct 3574520  T
Q  255 aagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||    
T  3574521 aagggtgattattctgccatgtcattctt 3574549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 55 - 283
Target Start/End: Original strand, 19650690 - 19650922
Alignment:
Q  55 ttgaaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatc 154  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  19650690 ttgatggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatc 19650789  T
Q  155 tttcatnnnnnnnnntacataacacccatcaccccatgatttccggctga---gaaattttattggctaacattaa-tttcaggactatttcttgataaa 250  Q
    ||||||         ||||||||||||| ||||||||||||||||||  |   || ||||||| |||||||||||| ||||| |||| ||||||||||||    
T  19650790 tttcataaaaaaaaatacataacacccaccaccccatgatttccggccaagctgagattttatcggctaacattaattttcaagactgtttcttgataaa 19650889  T
Q  251 atctaagggtgattattctgccatgtcattctt 283  Q
    |||||| ||||||||||||||||||||||||||    
T  19650890 atctaatggtgattattctgccatgtcattctt 19650922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 3089689 - 3089460
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3089689 ggaaaatgctagatatcaagaatgattttataagaaagatctaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 3089590  T
Q  160 t---nnnnnnnnntacataacacccatcaccccatgatttccggctga---gaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |            |||||| |||||| ||||||||||||||||||  |   || ||||||||||||||||||||||||| || |||||||||||||||||    
T  3089589 taaaaaaaaataatacatagcacccaccaccccatgatttccggccaagctgagattttattggctaacattaatttcaagaatatttcttgataaaatc 3089490  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||    
T  3089489 taagggtgattattctgccatgtcattctt 3089460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 58 - 283
Target Start/End: Original strand, 37216846 - 37217075
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  37216846 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatcttt 37216945  T
Q  158 cat-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaa 251  Q
    |||          ||||||||||||| ||||| ||||||| |     |||||||  |||||||||| |||||||||||||| ||||||||||||||||||    
T  37216946 cataaaaaaaaaatacataacacccaccaccctatgattttcagcaaggctgag--attttattggttaacattaatttcatgactatttcttgataaaa 37217043  T
Q  252 tctaagggtgattattctgccatgtcattctt 283  Q
    | ||||||||||||||||||||||||||||||    
T  37217044 tttaagggtgattattctgccatgtcattctt 37217075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 2754989 - 2754760
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  2754989 ggaaaatgctagatatcaagaatcattttataagaaagatttaagaatgacatggcacaataatcacctttaaatttcagtctcatttattaatctttca 2754890  T
Q  160 t---nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaa 251  Q
    |            |||||||||||||  ||||||||||||||     |||||||  |||||||||| |||||||||||||||||||||||||||||||||    
T  2754889 taaaaaaaaaaaatacataacacccactaccccatgatttccggtcaggctgag--attttattggttaacattaatttcaggactatttcttgataaaa 2754792  T
Q  252 tctaagggtgattattctgccatgtcattctt 283  Q
    ||||| ||||||||||||||||||||||||||    
T  2754791 tctaaaggtgattattctgccatgtcattctt 2754760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 54 - 283
Target Start/End: Complemental strand, 48161182 - 48160948
Alignment:
Q  54 tttgaaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaat 153  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||||||||||||| |||||||||||    
T  48161182 tttgaaggaaaatgctagatatcaagaatgattttataagaaatatccaagaacgacatgacacaataatcacctttagatttcagtctcatttattaat 48161083  T
Q  154 ctttcat--nnnnnnnnntacataacacccatcaccccatgatttccggct---gagaaattttattggctaacattaatttcaggactatttcttgata 248  Q
     ||||||           ||||||||||||| ||||||||| |||||||||     || |||||||||||||| |||||||||| |||||||||||||||    
T  48161082 ttttcataaaaaaaaaaatacataacacccaccaccccatggtttccggctaggctgagattttattggctaatattaatttcaagactatttcttgata 48160983  T
Q  249 aaatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||| ||||||||    
T  48160982 aaatctaagggtgattattctgccatatcattctt 48160948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 62 - 283
Target Start/End: Complemental strand, 33145980 - 33145755
Alignment:
Q  62 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat- 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||  ||||||||| |||||||     
T  33145980 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtcttatttattaacctttcata 33145881  T
Q  161 nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatcta 255  Q
             |||||| |||||| |||| ||| ||||||     |||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33145880 aaaaaaaaatacataccacccaccacctcataatttccggtcaggctgag--attttattggctaacattaatttcaggacaatttcttgataaaatcta 33145783  T
Q  256 agggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||    
T  33145782 agggtgattattctgccatgtcattctt 33145755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 58 - 283
Target Start/End: Original strand, 36864825 - 36865049
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctt 156  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||  ||    
T  36864825 aaggaaaatgctagatatcaagaatgattttatcaaaaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacatt 36864924  T
Q  157 tcatnnnnnnnnntacataacacccatcaccccatgatttccgg-ctgagaaattttattggctaacattaatttcaggactatttcttgataaaatcta 255  Q
    ||||         ||||||||||||| || |||||||||||||| |||||  ||| |||||||||||||||||||||||||||||| ||||||||| |||    
T  36864925 tcat-ataaaaaatacataacacccaccatcccatgatttccggcctgag--attctattggctaacattaatttcaggactattttttgataaaaccta 36865021  T
Q  256 agggtgattattctgccatgtcattctt 283  Q
    |||||||||||||| |||||||||||||    
T  36865022 agggtgattattctaccatgtcattctt 36865049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 37522323 - 37522096
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  37522323 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcataataatcacctttagatttcagtctcatttattaatctttca 37522224  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgatttccggc-----tgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |          ||||||||||||| |||||||| |||||||||     ||||  |||||||||| |||||||||||||| ||||||||||| ||||||||    
T  37522223 taaaaaaaagatacataacacccaccaccccataatttccggccaggttgag--attttattggttaacattaatttcatgactatttctttataaaatc 37522126  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    | ||||||||||||||| ||||||||||||    
T  37522125 ttagggtgattattctgtcatgtcattctt 37522096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 61 - 283
Target Start/End: Original strand, 8320378 - 8320606
Alignment:
Q  61 gaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat 160  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8320378 gaaaatgctagatatcaataatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 8320477  T
Q  161 --nnnnnnnnntacataacaccca-tcaccccatgattt-----ccggctgagaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
               ||||||||||||| |  |||||||||||     | |||||||  ||||||||||||||||||||||||| |||||||||||||||||||    
T  8320478 aaaaaaaaaaatacataacacccactacccccatgatttctggccaggctgag--attttattggctaacattaatttcaagactatttcttgataaaat 8320575  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
     |||||||||||||| |||||| ||||||||    
T  8320576 ttaagggtgattattttgccatatcattctt 8320606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 30385670 - 30385529
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30385670 ggaaaatgctaaatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 30385571  T
Q  160 tnnnnnnnnntacataacacccatcaccccatgatttccggc 201  Q
    |         ||||||||||||| ||||||||||||||||||    
T  30385570 taaaaataaatacataacacccaccaccccatgatttccggc 30385529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 58 - 160
Target Start/End: Original strand, 34482681 - 34482783
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34482681 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 34482780  T
Q  158 cat 160  Q
    |||    
T  34482781 cat 34482783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 58 - 283
Target Start/End: Original strand, 8361832 - 8362067
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||||||||   |||||| |||||||||||||||| ||||||||||||| ||||||||||||| |||||||| ||  ||    
T  8361832 aaggaaaatgctagatatcaagaatgatttatcaagaaatattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattcat--tt 8361929  T
Q  158 catnnnnnnnnn---------tacataacacccatcaccccatgatttccggctg---agaaattttattggctaacattaatttcaggactatttcttg 245  Q
    |||                  ||||| ||||||| ||||||||||||||||||     ||| |||||||||||||||||||||||||| || ||||||||    
T  8361930 cataaaaaaaaaaaaaaaaaatacatgacacccaccaccccatgatttccggcccgacagagattttattggctaacattaatttcagtacaatttcttg 8362029  T
Q  246 ataaaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8362030 ataaaatctaagggtgattattctgccatgtcattctt 8362067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 47738382 - 47738148
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||| |||||    
T  47738382 ggaaaatgttagatatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatcatccttagatttcagtctcatttattaacctttc 47738283  T
Q  159 -------atnnnnnnnnntacataacacccatcaccccatgatt-----tccggctgagaaattttattggctaacattaatttcaggactatttcttga 246  Q
           ||         ||||||||||||| ||||||||||||     || |||||||  ||||||||||||||||||||||||||||| |||| || |    
T  47738282 ataaaaaataaaaaaaaatacataacacccaccaccccatgatttctggtcaggctgag--attttattggctaacattaatttcaggacaattttttta 47738185  T
Q  247 taaaatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||| ||| ||||||||||||| ||||||||    
T  47738184 taaaatctaaaggtaattattctgccatatcattctt 47738148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 9796824 - 9797051
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||   ||||||    
T  9796824 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatgtcacaataatcactcttagatttcagtctcatttatt--cctttca 9796921  T
Q  160 t---nnnnnnnnntacataacacccatcaccccatgatttccggc---tgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |            ||||||| ||||| ||||||||||||| ||||     ||| ||||||||||||||||||||||| || || ||||||||||||||||    
T  9796922 taaaaaagaaaaatacataagacccaccaccccatgattttcggcccgacagagattttattggctaacattaatttaagtacaatttcttgataaaatc 9797021  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||| ||||||||||||||||||||||||||    
T  9797022 taatggtgattattctgccatgtcattctt 9797051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 60 - 270
Target Start/End: Complemental strand, 42298122 - 42297920
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||| |||||||||||||||||||          ||||||||||||| |||||||| |||| ||||||||||||| |||||||||| ||||||    
T  42298122 ggaaaatgctaaatatcaagaatgattttat----------caagaatgacatgacacaataaccacccttagatttcagtctcatttattaacctttca 42298033  T
Q  160 tnnnnnnnnntacataacacccatcaccccatgatttccggct-ga--gaaattttattggctaacattaatttcaggactatttcttgataaaatctaa 256  Q
    |         ||||||||| | | ||||||||||||||||||  ||  || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42298032 taaaaaaaa-tacataacatctaccaccccatgatttccggccagactgagattttattggctaacattaatttcaggactatttcttgataaaatctaa 42297934  T
Q  257 gggtgattattctg 270  Q
    ||||||||||||||    
T  42297933 gggtgattattctg 42297920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 283
Target Start/End: Complemental strand, 33839794 - 33839574
Alignment:
Q  72 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat-----nnnnn 165  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| ||||||||| |||||||||| |||||||              
T  33839794 atatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttaaatttcagtctcatttattaacctttcataaaaaaagaa 33839695  T
Q  166 nnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtga 262  Q
        ||||||||||| | ||||||||||||| ||| | ||  || |||||||||||||||||||||||||  || ||||||||||||||||||| |||||    
T  33839694 aaaatacataacacctaccaccccatgatttacggccagattgagattttattggctaacattaatttcaaaacaatttcttgataaaatctaatggtga 33839595  T
Q  263 ttattctgccatgtcattctt 283  Q
    |||||||| ||||| ||||||    
T  33839594 ttattctgtcatgttattctt 33839574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 58 - 254
Target Start/End: Complemental strand, 40328104 - 40327897
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctt 156  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||  ||||||| | |||    
T  40328104 aaggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttcagtcttatttatttacctt 40328005  T
Q  157 tcat-------nnnnnnnnntacataacacccatcaccccatgatttccggc-----tgagaaattttattggctaacattaatttcaggactatttctt 244  Q
    | ||                ||||||||||||| ||||| ||||||||||||     ||||  ||||||||||||||||||||||||||||| |||||||    
T  40328004 tgataaaaataaaaataaaatacataacacccaccaccctatgatttccggccaggttgag--attttattggctaacattaatttcaggacaatttctt 40327907  T
Q  245 gataaaatct 254  Q
    ||||||||||    
T  40327906 gataaaatct 40327897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 59 - 283
Target Start/End: Complemental strand, 41224505 - 41224276
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    |||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||| ||| |||||| || ||||||||  ||||||    
T  41224505 aggaaaatgctagatatcaagaatgatttatcaagaaatattcaagaatgacatggcacaataatcacccttaaatttcaatctcatttatt--tctttc 41224408  T
Q  159 at----nnnnnnnnntacataacacccatcaccccatgatttccggc---tgagaaattttattggctaacattaatttcaggactatttcttgataaaa 251  Q
    ||             ||||||||||||| |||||||||||||||| |     ||| |||||||| ||||||||||||||||  || ||||||| ||||||    
T  41224407 ataaaaaaaaaaaaatacataacacccaccaccccatgatttccgacccaacagagattttattagctaacattaatttcaatacaatttcttaataaaa 41224308  T
Q  252 tctaagggtgattattctgccatgtcattctt 283  Q
    |  ||||||||| ||||| |||||||||||||    
T  41224307 ttcaagggtgataattctaccatgtcattctt 41224276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 283
Target Start/End: Original strand, 41883031 - 41883245
Alignment:
Q  75 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcatnnnnnnnnn--ta 171  Q
    |||| ||||||||||| |||||||||||||||||||||||| | |||||||| |||| ||||||||||  |||||| || |||| ||           ||    
T  41883031 tcaaaaatgattttatgaagaaagattcaagaatgacatggtaaaataatcatctttggatttcagtcttatttatcaaccttttataaaaaaaaaaata 41883130  T
Q  172 cataacacccatcaccccatgatttccggc---tgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattc 268  Q
    ||||||||||| ||||||||||||||  ||   |  || ||||||||| |||||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  41883131 cataacacccaccaccccatgatttctagccagtctgagattttattgactaacattaatttcgggacaatttcttgataaaatttaagggtgattattc 41883230  T
Q  269 tgccatgtcattctt 283  Q
    |||||||||||||||    
T  41883231 tgccatgtcattctt 41883245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 170 - 280
Target Start/End: Complemental strand, 30385170 - 30385057
Alignment:
Q  170 tacataacacccatcaccccatgatttccggc-----tgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgatt 264  Q
    ||||||||||||| ||||||||||||||||||     |||||  ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  30385170 tacataacacccaccaccccatgatttccggccaggctgaga--ttttattggttaacattaatttcaggactatttcttgataaaatataagggtgatt 30385073  T
Q  265 attctgccatgtcatt 280  Q
    ||||||||||||||||    
T  30385072 attctgccatgtcatt 30385057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 170 - 283
Target Start/End: Complemental strand, 11347427 - 11347311
Alignment:
Q  170 tacataacacccatcaccccatgatttccggc---tgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattat 266  Q
    ||||||||||||| ||||||||||||||  ||   |  || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  11347427 tacataacacccaccaccccatgatttctagccactctgagattttattggctaacattaatttcaggactatttcctgataaaatctaagggttattat 11347328  T
Q  267 tctgccatgtcattctt 283  Q
    |||||||||||||||||    
T  11347327 tctgccatgtcattctt 11347311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 61 - 269
Target Start/End: Complemental strand, 46919164 - 46918959
Alignment:
Q  61 gaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||| |||||||||||||||||||||| || |||||||||| |||||||||||| ||||||||||| |||||||| |||  |||||||||||| |||    
T  46919164 gaaaatgttagatatcaagaatgattttatcaaaaaagattcaataatgacatggcagaataatcacctctagatttcggtcttatttattaatctatca 46919065  T
Q  160 tnnnnnnnnntacataacacccatcaccccatgatttccggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaaggg 259  Q
    |         || |||||| ||| ||||||||||||||| ||    | |||||||| |||||||||||||||  ||| ||||||||||||||||||| ||    
T  46919064 t--aaatatatatataacatccaccaccccatgatttccagc--caacattttatttgctaacattaatttcgagacaatttcttgataaaatctaaagg 46918969  T
Q  260 tgattattct 269  Q
    | ||||||||    
T  46918968 taattattct 46918959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 60 - 274
Target Start/End: Complemental strand, 24343820 - 24343599
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    |||||||| |||||||||||||||||||||| || ||||||||||||||||||||  |  ||||||||| |||||||||||||  ||||||||| |||||    
T  24343820 ggaaaatgttagatatcaagaatgattttatcaaaaaagattcaagaatgacatgatatgataatcacccttagatttcagtcttatttattaacctttc 24343721  T
Q  159 ---atnnnnnnnnntacataacacccatcaccccatgatttccgg-ctg--agaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
       |          ||||||||||||| ||||| ||||||| ||| | |   || |||||||||||||||||||||||| | || |||||||||||||||    
T  24343720 aaaaaaaaaaaaaatacataacacccaccacccgatgattttcggtcaggatgagattttattggctaacattaatttcggaacaatttcttgataaaat 24343621  T
Q  253 ctaagggtgattattctgccat 274  Q
    ||||| ||||||||||||||||    
T  24343620 ctaagagtgattattctgccat 24343599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 26613017 - 26612916
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||| |||||    
T  26613017 ggaaaatgttagatatcaataatgattttattaagaaagattcaagaataacatggcacaataatcacccttagatttcagtctcatttattaacctttc 26612918  T
Q  159 at 160  Q
    ||    
T  26612917 at 26612916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 170 - 283
Target Start/End: Complemental strand, 42297513 - 42297396
Alignment:
Q  170 tacataacacccatcaccccatgatttccgg-----ctgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgatt 264  Q
    ||||||||| ||| |||||||||||||||||     ||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42297513 tacataacatccaccaccccatgatttccggtcaggctgaga--ttttattggctaacattaatttcagaactatttcttgataaaatctaagggtgatt 42297416  T
Q  265 attct-gccatgtcattctt 283  Q
    ||||| | ||||||||||||    
T  42297415 attctagtcatgtcattctt 42297396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 34482857 - 34482932
Alignment:
Q  208 attttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  34482857 attttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctaccatatcattctt 34482932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 42921394 - 42921295
Alignment:
Q  62 aaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat 160  Q
    |||||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||| ||||||| ||| ||||||||| |||||||||| |||||||    
T  42921394 aaaatgctagatattaagaatgattttatcaagaaatatttaagaatgacatggcacaacaatcacccttaaatttcagtctcatttattaacctttcat 42921295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 42921261 - 42921186
Alignment:
Q  208 attttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||| ||  || |||| | ||||||||||||    
T  42921261 attttattggctaacattaaattcaggacaatttcttgataaaatctaaaggcaatcattcggtcatgtcattctt 42921186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 2754721 - 2754794
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||||||||||||||    
T  2754721 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacctttagattt 2754794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 3137475 - 3137402
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  3137475 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcaaaataatcacccttagattt 3137402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 3574588 - 3574515
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  3574588 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 3574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 6041888 - 6041961
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||||| ||||||||    
T  6041888 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 6041961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 9797082 - 9797017
Alignment:
Q  72 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||| |||||| | |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  9797082 atatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcaccattagattt 9797017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 47738117 - 47738182
Alignment:
Q  72 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||| |||||||| |||||| |||||||||||| |||||| |||||| ||||||||||||    
T  47738117 atatcaagaaagattttatcaagaaatattcaagaatgatatggcagaataattacctttagattt 47738182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 33145717 - 33145789
Alignment:
Q  64 aatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| | |||  || ||||||||||||||| |||||||||| ||||||||    
T  33145717 aatgctatatatcaagaaagattttattaaaaaattttaagaatgacatggcagaataatcacccttagattt 33145789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 26612890 - 26612828
Alignment:
Q  221 acattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||| |||||||||| || |||||||||||   || |||||||||||||||||||||    
T  26612890 acattaatttaaggactattttttaataaaatctaaaaatggttattctgccatgtcattctt 26612828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 8362078 - 8362033
Alignment:
Q  91 aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  8362078 aagaaaaattcaagaatgacatggcagaataatcacccttagattt 8362033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 11347272 - 11347345
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||| ||| ||||||||    
T  11347272 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataataacccttagattt 11347345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 37217114 - 37217041
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||| ||||    
T  37217114 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 37217041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 19650953 - 19650888
Alignment:
Q  72 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||| ||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  19650953 atattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcaccattagattt 19650888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 30385015 - 30385088
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||  ||||||||| |||||||| ||||||  ||||| |||||||||||| |||||||||| ||| ||||    
T  30385015 aatgctatttatcaagaaagattttatcaagaaaatttcaaaaatgacatggcagaataatcacccttatattt 30385088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 34482971 - 34482898
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||| |||| | |||||||||| ||||||||    
T  34482971 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggtagaataatcacccttagattt 34482898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 41883256 - 41883211
Alignment:
Q  91 aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||| ||||||||||||||||||| |||||||||| ||| ||||    
T  41883256 aagaaaaattcaagaatgacatggcagaataatcacccttaaattt 41883211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 1e-81; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 59 - 283
Target Start/End: Complemental strand, 45637982 - 45637755
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45637982 aggaaaatgctagatattaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 45637883  T
Q  159 atnnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaatcta 255  Q
    ||         ||||||||| ||| ||||||||||||||||| | ||  || ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45637882 ataaaaaaaaatacataacatccaccaccccatgatttccggccagactgagattttattggctagcattaatttcaggactatttcttgataaaatcta 45637783  T
Q  256 agggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||    
T  45637782 agggtgattattctgccatgtcattctt 45637755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 57 - 283
Target Start/End: Complemental strand, 3962251 - 3962022
Alignment:
Q  57 gaaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctt 156  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3962251 gaaggaaaatgctagatatcaagaatgattttataagaaatatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 3962152  T
Q  157 tcatnnnnnnnnntacataacacccatcaccccatgatttccggctga---gaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    ||||         ||||||||||||| ||||||||||||||||||  |   || ||||||||||||||||||||||||| |||||||||||||||||||     
T  3962151 tcataaaaaaaaatacataacacccaccaccccatgatttccggccaagctgagattttattggctaacattaatttcaagactatttcttgataaaatt 3962052  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||| ||||||||||||    
T  3962051 taagggtgattattctgtcatgtcattctt 3962022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 59 - 283
Target Start/End: Complemental strand, 42612082 - 42611854
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  42612082 aggaaaatgctagatatcaagaatgattttataagaaagatctaagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttc 42611983  T
Q  159 at-nnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
    ||          ||||||||||||| ||||||||||||||||| | ||  |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42611982 ataaaaaaaaaatacataacacccaccaccccatgatttccggtcagactgaaattttattggctaacattaatttcaagactatttcttgataaaatct 42611883  T
Q  255 aagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||    
T  42611882 aagggtgattattctgccatgtcattctt 42611854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 24395241 - 24395015
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24395241 ggaaaatgctagatatcaagaatgattttataaaaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 24395142  T
Q  160 tnnnnnnnnntacataacacccatcaccccatgatttccggc-----tgagaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
    |         ||||||||||||| ||||||||||||||||||     ||||  |||||||||||||||||||||||||| ||||||| ||||||||||||    
T  24395141 taaaaataaatacataacacccaccaccccatgatttccggccaggttgag--attttattggctaacattaatttcagaactattttttgataaaatct 24395044  T
Q  255 aagggtgattattctgccatgtcattctt 283  Q
    || |||  |||||||||||||||||||||    
T  24395043 aaaggttgttattctgccatgtcattctt 24395015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 59 - 283
Target Start/End: Original strand, 48880721 - 48880949
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||    
T  48880721 aggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacatttagatttcagtttcatttattaatctttc 48880820  T
Q  159 at-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    ||          ||||||||||||| |||||||||||||||     |||||||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  48880821 ataaaaaaaagatacataacacccaccaccccatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaat 48880918  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||| ||||||||||||    
T  48880919 ctaagggtgattattctgtcatgtcattctt 48880949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 34483108 - 34482878
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  34483108 ggaaaatgttagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttca 34483009  T
Q  160 t-----nnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaa 251  Q
    |              ||||||||||||| || |||||||||||||| | ||  || ||||||||||||||||||||||||||||||||||||||||||||    
T  34483008 taaaaataaaaaaaatacataacacccacca-cccatgatttccggccagactgagattttattggctaacattaatttcaggactatttcttgataaaa 34482910  T
Q  252 tctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||||    
T  34482909 tctaagggtgattattctgccatgtcattctt 34482878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 62 - 283
Target Start/End: Original strand, 4974532 - 4974757
Alignment:
Q  62 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat- 160  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||     
T  4974532 aaaatgctagatatcaagaatgattttataaaaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcata 4974631  T
Q  161 nnnnnnnnntacataacacccatcaccccatgatttccggctga---gaaattttattggctaacattaatttcaggactatttcttgataaaatctaag 257  Q
             ||||||||||||| |||| |||||||||||||  |   || ||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  4974632 aaaaaaaaatacataacacccaccacctcatgatttccggccaaactgagattttattggctaacattaatttcaggataatttcttgataaaatctaag 4974731  T
Q  258 ggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||    
T  4974732 ggtgattattctgccatgtcattctt 4974757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 30848839 - 30848612
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  30848839 ggaaaatgctagatatcaagaatgcttttataagaaaaattcaagaatgacatggcacaataatcacctttaaatttcagtctcatttattaatctttca 30848740  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaatcta 255  Q
    |          |||||||||||||  | |||||||||||||| | ||  || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  30848739 taaaaaaaagatacataacacccactatcccatgatttccggccagactgagattttattggttaacattaatttcaggactatttcttgataaaatcta 30848640  T
Q  256 agggtgattattctgccatgtcattctt 283  Q
    ||| ||||||||||||||||||||||||    
T  30848639 aggatgattattctgccatgtcattctt 30848612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 15329546 - 15329316
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  15329546 aaggaaaatgctagatataaagaatgattttataagaaatattcaagaatgacatggcacaataatcacttttagatttcagtctcatttattaatcttt 15329447  T
Q  158 cat--nnnnnnnnntacataacacccatcaccccatgatttccggc---tgagaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    |||            | ||||||| || ||||||||||||||||||   |  || ||||||||| ||||||||||||||| |||||||||||||||||||    
T  15329446 cataaaaaataaaaaaaataacactcaccaccccatgatttccggccagtctgagattttattgactaacattaatttcaagactatttcttgataaaat 15329347  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||| ||||||||||||    
T  15329346 ctaagggtgattattctgtcatgtcattctt 15329316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 25167651 - 25167872
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||      |||||||||    
T  25167651 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctca------aatctttca 25167744  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaatcta 255  Q
    |          ||||||||||||||||||||||||||||||| | ||  || |||||||||| ||||||||||||||| |||||||||||||||||||||    
T  25167745 taaaaaaaagatacataacacccatcaccccatgatttccggccagactgagattttattggttaacattaatttcagaactatttcttgataaaatcta 25167844  T
Q  256 agggtgattattctgccatgtcattctt 283  Q
    ||| ||||||||||||||||||||||||    
T  25167845 aggatgattattctgccatgtcattctt 25167872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 58 - 283
Target Start/End: Original strand, 15577640 - 15577872
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  15577640 aaggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatgtcacaataatcacctttagatttcagtctcatttattaatcttt 15577739  T
Q  158 cat----nnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaa 250  Q
     ||             ||||||||||||| || |||||||||||||| | ||  || ||| ||||||||||||||||||||| |||| ||||||||||||    
T  15577740 tataaaaaaaaaaaaatacataacacccaccaacccatgatttccggccagactgagattatattggctaacattaatttcaagactttttcttgataaa 15577839  T
Q  251 atctaagggtgattattctgccatgtcattctt 283  Q
     ||||||||||||||||||||||||||||||||    
T  15577840 gtctaagggtgattattctgccatgtcattctt 15577872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 18037249 - 18037021
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||| ||||||||   |||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||  |||      
T  18037249 aaggaaaatgctagatatcaacaatgatttatcaagaaagatttaagaatgacatggtacaataatcacccttagatttcagtcacatttattcctctca 18037150  T
Q  158 catnnnnnnnnntacataacacccatcaccccatgatttccggc---tgagaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
     |          ||||||||||||| |||||||||||||| |||     ||| |||||||||||||||||||||||||| || |||| |||||||||| |    
T  18037149 taaaaaaaaaaatacataacacccaccaccccatgatttctggcccgacagagattttattggctaacattaatttcagtacaattttttgataaaattt 18037050  T
Q  255 aagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||    
T  18037049 aagggtgattattctgccatgtcattctt 18037021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 61 - 283
Target Start/End: Original strand, 37476876 - 37477102
Alignment:
Q  61 gaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctt-tca 159  Q
    |||||||||||||||||||||||||||   |||||||||| || ||||||||||||||||||||||| ||||||||||||| |||||||| || || |      
T  37476876 gaaaatgctagatatcaagaatgatttatcaagaaagatttaataatgacatggcacaataatcacccttagatttcagtctcatttattcattttatac 37476975  T
Q  160 tnnnnnnnnntacataacacccatcaccccatgatttccggc---tgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaa 256  Q
              ||||||||||||| ||||||||||||||||||     ||| |||||||||||||||||||||||||| || ||||||||||||||| |||    
T  37476976 agaaaaaaaatacataacacccaccaccccatgatttccggcccgacagagattttattggctaacattaatttcagtacaatttcttgataaaatttaa 37477075  T
Q  257 gggtgattattctgccatgtcattctt 283  Q
    || ||||||||||||||||||||||||    
T  37477076 ggatgattattctgccatgtcattctt 37477102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 50 - 283
Target Start/End: Complemental strand, 42696364 - 42696126
Alignment:
Q  50 tttgtttgaaggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacattta 148  Q
    |||||||  ||||||||| |||||||||| ||||||||||| || ||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||    
T  42696364 tttgtttttaggaaaatgttagatatcaataatgattttatcaaaaaaaattcaagaatgacatggtacaataatcacccttagatttcagtctcattta 42696265  T
Q  149 ttaatctttcatnnnnnnnnn-tacataacacccatcaccccatgatttccggc-----tgagaaattttattggctaacattaatttcaggactatttc 242  Q
    ||||  ||||||          ||||||||| ||| |||||| |||||||||||     |||||  |||||||| ||||||||||||||||||| |||||    
T  42696264 ttaacttttcataaaaaaaaaatacataacatccaccaccccttgatttccggccaggttgaga--ttttattgactaacattaatttcaggacaatttc 42696167  T
Q  243 ttgataaaatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  42696166 ttgataaaatataagggtgattattctgctatgtcattctt 42696126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 62 - 283
Target Start/End: Original strand, 20009895 - 20010119
Alignment:
Q  62 aaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat 160  Q
    |||||| ||||||||| |||||||||||| || |||||||||||||||||||| |||||||||||   |||||||| |||| |||||||||| |||| ||    
T  20009895 aaaatgatagatatcatgaatgattttatcaaaaaagattcaagaatgacatgacacaataatcatacttagattttagtctcatttattaacctttaat 20009994  T
Q  161 nnnnnnnnntacataacacccatcaccccatgatttccggc-----tgagaaattttattggctaacattaatttcaggactatttcttgataaaatcta 255  Q
             |||||||||||||| ||||||| |||||||||     |||||  |||||||||||||||||||||||||||| |||| |||||||||||||    
T  20009995 aagaaaaaatacataacacccataaccccataatttccggccaggttgaga--ttttattggctaacattaatttcaggacaattttttgataaaatcta 20010092  T
Q  256 agggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||  |||||||||||    
T  20010093 agggtgattattctg-tatgtcattctt 20010119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 35445668 - 35445567
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  35445668 aggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgatatgacacaataatcacctttagatttcagtctcatttattaatctttc 35445569  T
Q  159 at 160  Q
    ||    
T  35445568 at 35445567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 69 - 283
Target Start/End: Complemental strand, 29737406 - 29737182
Alignment:
Q  69 tagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat------n 161  Q
    |||||||||||||||||||||| |||||||||| |||||| ||||| ||||||||||||| ||||||||||||| |||||||||| |||||||           
T  29737406 tagatatcaagaatgattttatcaagaaagatttaagaataacatgtcacaataatcacccttagatttcagtctcatttattaacctttcatagaaaga 29737307  T
Q  162 nnnnnnnntacataacacccatcaccccatgatttccgg-ctg--agaaattttattggctaacattaatttcaggactatttcttgataaaatctaagg 258  Q
            |||||||| ||||  |||||||||||||||| | |   || |||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  29737306 aaaaaaaatacataactcccactaccccatgatttccggtcaggttgagattttattggctaacattaatttcgggacaatttcttaataaaatctaagg 29737207  T
Q  259 gtgattattctgccatgtcattctt 283  Q
    ||||||||||| |||||||||||||    
T  29737206 gtgattattctaccatgtcattctt 29737182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 59 - 283
Target Start/End: Complemental strand, 15238655 - 15238425
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    |||||||||||||||||||||||||||||   || ||| ||| |||||||||||| ||||||||||| | ||||||||||||| ||||||||   |||||    
T  15238655 aggaaaatgctagatatcaagaatgatttatcaaaaaatatttaagaatgacatgacacaataatcatccttagatttcagtctcatttattc--ctttc 15238558  T
Q  159 atnnnnnnnnn-----tacataacacccatcaccccatgatttccggctg---agaaattttattggctaacattaatttcaggactatttcttgataaa 250  Q
    ||              || |||||||||| ||||||||||||||||||     ||| ||||||||| |||||||||||||||| || |||||||||||||    
T  15238557 ataaaaaaaataaaaataaataacacccaccaccccatgatttccggcccgacagagattttattgactaacattaatttcagtacaatttcttgataaa 15238458  T
Q  251 atctaagggtgattattctgccatgtcattctt 283  Q
    |||||| ||||||||||||||||||||||||||    
T  15238457 atctaatggtgattattctgccatgtcattctt 15238425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 35876514 - 35876414
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35876514 ggaaaatgctagatatcaagaatgattttataagaaatatctaaaaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 35876415  T
Q  160 t 160  Q
    |    
T  35876414 t 35876414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 35444676 - 35444601
Alignment:
Q  208 attttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35444676 attttattggttaacattaatttcagaactatttcttgataaaatctaagggtgattattctgccatgtcattctt 35444601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 36790413 - 36790488
Alignment:
Q  208 attttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||| || ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  36790413 attttattggctaacattaatttcagaacaatttcttgataaaatttaagggtaattattctgccatgtcattctt 36790488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 40880739 - 40880814
Alignment:
Q  208 attttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  40880739 attttattggctaacattaatttcaggataatttcttcataaaatttaaggatgattattctgccatgtcattctt 40880814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 4974796 - 4974723
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  4974796 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 4974723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 42611815 - 42611888
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  42611815 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 42611888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 45637716 - 45637789
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  45637716 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 45637789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 133
Target Start/End: Complemental strand, 15577911 - 15577841
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttaga 133  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| |||||    
T  15577911 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttaga 15577841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 126
Target Start/End: Original strand, 40880641 - 40880706
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcac 126  Q
    |||||||||||||||||||||||||||| ||  |||||||| || ||| ||||||||||||||||||    
T  40880641 ggaaaatgctagatatcaagaatgatttgat-tgaaagattaaaaaataacatggcacaataatcac 40880706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 15329277 - 15329350
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||||| ||||||||    
T  15329277 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 15329350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 34482839 - 34482912
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  34482839 aatgctatatatcaagaaagattttattaagaaaattttaagaatgacatggcagaataatcacccttagattt 34482912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 36790271 - 36790336
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 124  Q
    ||||||||||| ||||||| |||| |||||| || |||||||||||||||||||| ||||||||||    
T  36790271 ggaaaatgctaaatatcaataatggttttatcaacaaagattcaagaatgacatgacacaataatc 36790336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 48880988 - 48880915
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||||| ||||||||    
T  48880988 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 48880915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 15238414 - 15238459
Alignment:
Q  91 aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  15238414 aagaaaaattcaagaatgacatggcagaataatcaccattagattt 15238459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 24394976 - 24395049
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||  ||||||||||||    
T  24394976 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataacaacctttagattt 24395049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 35444562 - 35444635
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||| ||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  35444562 aatgctatatattaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 35444635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 4974606 - 4974572
Alignment:
Q  249 aaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||| |||||||||||||||    
T  4974606 aaatctaagggtgattattgtgccatgtcattctt 4974572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 37477141 - 37477079
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatca 125  Q
    ||||||| |||||||||| |||||| | |||||| ||| ||||||||||||||| ||||||||    
T  37477141 aatgctatatatcaagaaagattttctcaagaaaaatttaagaatgacatggcagaataatca 37477079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 3961983 - 3962056
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  || |||||||||||| || |||||||||| ||| ||||    
T  3961983 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatcacccttaaattt 3962056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 18036990 - 18037055
Alignment:
Q  72 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||| |||||| | |||||| ||| ||||||||||||||| |||||||||| ||| ||||    
T  18036990 atatcaagaaagattttttcaagaaaaatttaagaatgacatggcagaataatcacccttaaattt 18037055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 25167911 - 25167838
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  || ||||||||||||||| |||||||| | ||||||||    
T  25167911 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatcatccttagattt 25167838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 29737143 - 29737216
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  || ||||||||||||| | |||||||||| ||||||||    
T  29737143 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggtagaataatcacccttagattt 29737216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 36790527 - 36790454
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| | |||||| |||||| ||| ||||||||||||||| |||||| ||| ||| ||||    
T  36790527 aatgctatatatcaagaaagtttttatcaagaaaaatttaagaatgacatggcagaataattacccttaaattt 36790454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 152; Significance: 2e-80; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 33696969 - 33696739
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33696969 aaggaaaatgctagatatcaagaatgattttataagaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 33696870  T
Q  158 cat--nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaa 250  Q
    |||           ||||||||||||| |||||||||||||||     |||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  33696869 cataaaaaaaaaattacataacacccaccaccccatgatttccggccaggctgag--attttattggctaacattaatttcaggactatttcttgataaa 33696772  T
Q  251 atctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||||||    
T  33696771 atctaagggtgattattctgccatgtcattctt 33696739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 18365369 - 18365595
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  18365369 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttca 18365468  T
Q  160 tnnnnnnnnntacataacacccatcaccccatgatttccggc--tga-gaaattttattggctaacattaatttcaggactatttcttgataaaatctaa 256  Q
    |         |||||||||||||  |||||||||||||||||   || || ||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  18365469 taaaaaaaaatacataacacccactaccccatgatttccggccaggatgagattttattggctaacattaatttcaagactatttcttgataaaatttaa 18365568  T
Q  257 gggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||    
T  18365569 gggtgattattctgccatgtcattctt 18365595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 18370633 - 18370859
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  18370633 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttca 18370732  T
Q  160 tnnnnnnnnntacataacacccatcaccccatgatttccggc--tga-gaaattttattggctaacattaatttcaggactatttcttgataaaatctaa 256  Q
    |         |||||||||||||  |||||||||||||||||   || || ||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  18370733 taaaaaaaaatacataacacccactaccccatgatttccggccaggatgagattttattggctaacattaatttcaagactatttcttgataaaatttaa 18370832  T
Q  257 gggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||    
T  18370833 gggtgattattctgccatgtcattctt 18370859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 17175816 - 17176043
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  17175816 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttca 17175915  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |          ||||||||||||| |||||||||||||||     |||||||  ||||||||||||||||||||||||| || |||||||||||||||||    
T  17175916 taaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgag--attttattggctaacattaatttcatgattatttcttgataaaatc 17176013  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||| ||||||||||||    
T  17176014 taagggtgattattctgtcatgtcattctt 17176043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 33695121 - 33695349
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  33695121 ggaaaatgctagatatcaagaatgattttataagaaatatttaagaatgatatgtcacaataatcacctttagatttcagtctcatttattaatctttca 33695220  T
Q  160 t--nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    |           ||||||||||||| |||||||||||||||     |||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  33695221 taaaaaaaaaattacataacacccaccaccccatgatttccggccaggctgag--attttattggctaacattaatttcaggactatttcttgataaaat 33695318  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||||    
T  33695319 ctaagggtgattattctgccatgtcattctt 33695349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 58 - 283
Target Start/End: Original strand, 17705262 - 17705487
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||| ||||    
T  17705262 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacc-ttagatttcagtctcatttattaaccttt 17705360  T
Q  158 catnnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
    |||         ||||||||||||| || |||||||||||||| | ||  || ||||||||||||||||||||||||||||| |||||||||||||||||    
T  17705361 cat--aaaaaattacataacacccaccatcccatgatttccggccagactgagattttattggctaacattaatttcaggacaatttcttgataaaatct 17705458  T
Q  255 aagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||| ||||||||||||    
T  17705459 aagggtgattattctgtcatgtcattctt 17705487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 57 - 283
Target Start/End: Complemental strand, 32702478 - 32702248
Alignment:
Q  57 gaaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctt 156  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||    
T  32702478 gaaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctt 32702379  T
Q  157 tcat-nnnnnnnnntacataacacccatcaccccatgatttccggct-ga--gaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    ||||          ||||||| ||||| ||||||||||||||||||| ||   | |||||||||| ||| ||||||||||||||||||||||||||||||    
T  32702378 tcataaaaaaaagatacataagacccaccaccccatgatttccggctagactcagattttattggttaatattaatttcaggactatttcttgataaaat 32702279  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||| ||||||||    
T  32702278 ctaagggtgattattctgccatatcattctt 32702248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 58 - 283
Target Start/End: Original strand, 23290874 - 23291106
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||    
T  23290874 aaggaaaatgctagatatcaaaaatgattttataagaaagattcaagaatgatatggcacaataattacctttagatttcagtctcatttattaatcttt 23290973  T
Q  158 cat----nnnnnnnnntacataacacccatcaccccatgattt-----ccggctgagaaattttattggctaacattaatttcaggactatttcttgata 248  Q
    |||             |||||||||||||||||||||||||||     | |||||||  |||||||||| ||||||||||||||| ||||||||||||||    
T  23290974 cataaaaaaaagaaaatacataacacccatcaccccatgatttctggccaggctgag--attttattggttaacattaatttcagaactatttcttgata 23291071  T
Q  249 aaatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||||||||    
T  23291072 aaatctaagggtgattattctgccatgtcattctt 23291106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 2309218 - 2309445
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||    
T  2309218 ggaaaatgctagatatcaacgatgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 2309317  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgatttccggctga---gaaattttattggctaacattaatttcaggactatttcttgataaaatcta 255  Q
    |          |||||||||||||  |||||||||||||||||  |   || ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2309318 taaaaaaaaaatacataacacccacaaccccatgatttccggccaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 2309417  T
Q  256 agggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||| |||||||    
T  2309418 agggtgattattctgccatgccattctt 2309445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 54 - 283
Target Start/End: Complemental strand, 28675424 - 28675191
Alignment:
Q  54 tttgaaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaat 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||     
T  28675424 tttgaaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaac 28675325  T
Q  154 ctttcat-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgat 247  Q
    |||||||          |||||||| |||| |||||||||||||||     |||||||  |||||||| |||||||||||||||||||| ||||||||||    
T  28675324 ctttcataaataaaaaatacataacccccaccaccccatgatttccggccaggctgag--attttattagctaacattaatttcaggacaatttcttgat 28675227  T
Q  248 aaaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||| | ||||||||||||    
T  28675226 aaaatctaagggtgattattccgacatgtcattctt 28675191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 62 - 283
Target Start/End: Original strand, 6031537 - 6031763
Alignment:
Q  62 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat- 160  Q
    ||||| || |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||     
T  6031537 aaaatactggatatcaagaatgattttataaaaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttttata 6031636  T
Q  161 -nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
              ||||||||||||| |||||||||||||||     ||||| |  |||||||||| |||||||||||||| ||||||||||||||||||| |    
T  6031637 aaaaaaaaaatacataacacccaccaccccatgatttccggccaggctggg--attttattggttaacattaatttcaagactatttcttgataaaattt 6031734  T
Q  255 aagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||| ||||||||||||    
T  6031735 aagggtgattattctgtcatgtcattctt 6031763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 46 - 283
Target Start/End: Original strand, 11548370 - 11548610
Alignment:
Q  46 aatatttgtttgaaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacat 145  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||   ||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  11548370 aatattttttttaagaaaaatgctagatatcaagaatgatttatcaagaacgattcaagaatgacatggcacaataatcacccttagatttcagtctcat 11548469  T
Q  146 ttattaatctttcat---nnnnnnnnntacataacacccatcaccccatgatttccggc---tgagaaattttattggctaacattaatttcaggactat 239  Q
    |||||   |||||||            ||||||||||||| ||||||||||||||||||     ||| ||||||||||||||||||||| |||| || ||    
T  11548470 ttatt--cctttcataaaaaagaaaaatacataacaccca-caccccatgatttccggcccgacagagattttattggctaacattaatatcagtacaat 11548566  T
Q  240 ttcttgataaaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  11548567 ttcttgataaaatctaagggtgattattctgccatgtcattctt 11548610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 101 - 283
Target Start/End: Complemental strand, 6127506 - 6127318
Alignment:
Q  101 caagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcatnnnnnnnnn--tacataacacccatcaccccatgatttcc 198  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||           ||||||||||||| ||||||||||||||     
T  6127506 caagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttcatataaaaaaaaatacataacacccaccaccccatgatttct 6127407  T
Q  199 ggctga---gaaattttattggctaacattaattt-caggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 283  Q
    |||  |   || ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6127406 ggccaaactgatattttattggctaacattaattttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattctt 6127318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 128 - 283
Target Start/End: Original strand, 9752109 - 9752267
Alignment:
Q  128 tttagatttcagtcacatttattaatctttcatnnnnnnnnntacataacacccatcaccccatgatttccggc-----tgagaaattttattggctaac 222  Q
    |||||||||||||| |||||||||| |||||||         ||||||||||||||||||||||||||||||||     |||||  ||||||||||||||    
T  9752109 tttagatttcagtctcatttattaacctttcataaaaaaaaatacataacacccatcaccccatgatttccggccaggctgaga--ttttattggctaac 9752206  T
Q  223 attaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||    
T  9752207 attaatttcaggacaatttcttaataaaatctaagggtgattattctgccatatcattctt 9752267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 170 - 283
Target Start/End: Complemental strand, 25987089 - 25986973
Alignment:
Q  170 tacataacacccatcaccccatgatttccggct-ga--gaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattat 266  Q
    ||||||||||||| ||||||||||||||||||  ||  || |||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||    
T  25987089 tacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatttcaggactatttcttgataaaatttaagagtgattat 25986990  T
Q  267 tctgccatgtcattctt 283  Q
    | |||||||||||||||    
T  25986989 tttgccatgtcattctt 25986973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 91 - 201
Target Start/End: Original strand, 18889470 - 18889580
Alignment:
Q  91 aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcatnnnnnnnnntacataacacccatcacccca 190  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||         ||||||| ||||| |||||||    
T  18889470 aagaatgattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaatacataaaacccaccacccca 18889569  T
Q  191 tgatttccggc 201  Q
    |||||||||||    
T  18889570 tgatttccggc 18889580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 283
Target Start/End: Original strand, 8515556 - 8515747
Alignment:
Q  94 aaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcatnnnnnnnnntacataacacccatcaccccatga 193  Q
    ||||||| || |||||||||| | |||||||||  |||||||||||||  |||||||||  ||||||         ||||||||| ||| ||||||||||    
T  8515556 aaagatttaaaaatgacatggtagaataatcactcttagatttcagtcttatttattaacatttcataaaaaaaaatacataacatccaccaccccatga 8515655  T
Q  194 tttccg-----gctgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||     |||||||  ||||||||||||||||||||||| |||| |||||||||||||||| ||  |||||||||||||||||||||||||    
T  8515656 tttccgatcaggctgaga--ttttattggctaacattaatttcgggacaatttcttgataaaatc-aaatgtgattattctgccatgtcattctt 8515747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 58 - 160
Target Start/End: Complemental strand, 29693718 - 29693615
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctt 156  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||| |||||||||||||  ||||||||  |||    
T  29693718 aaggaaaatgctagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatgacccttagatttcagtcttatttattatcctt 29693619  T
Q  157 tcat 160  Q
    ||||    
T  29693618 tcat 29693615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 34238883 - 34238948
Alignment:
Q  61 gaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcac 126  Q
    |||||||||||||||||||||||||||||| |  ||||||||||||||||||| ||||||||||||    
T  34238883 gaaaatgctagatatcaagaatgattttatcaagaagattcaagaatgacatgacacaataatcac 34238948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 33695388 - 33695315
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  33695388 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 33695315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 33696700 - 33696773
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  33696700 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 33696773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 582522 - 582602
Alignment:
Q  60 ggaaaatgctagatatcaagaatgatttta-taagaaagattcaagaatgacat-ggcacaataatcacctttagatttca 138  Q
    |||||||| ||||||||||||||||||||| ||||||| ||| |||||||| || |||| |||||||||| ||||||||||    
T  582522 ggaaaatgttagatatcaagaatgattttattaagaaaaatttaagaatgatatgggcagaataatcaccattagatttca 582602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 6127279 - 6127352
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  6127279 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 6127352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 23291145 - 23291072
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  23291145 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 23291072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 2121004 - 2121059
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgg 114  Q
    |||||||| |||||||||| ||||||||||| || |||||||||||||||||||||    
T  2121004 ggaaaatgttagatatcaaaaatgattttataaaaaaagattcaagaatgacatgg 2121059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 8515786 - 8515723
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcac 126  Q
    ||||||| |||||||||| |||||||| |||| ||||| ||||||||||||||| |||||||||    
T  8515786 aatgctatatatcaagaaagattttatcaagacagatttaagaatgacatggcagaataatcac 8515723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 136
Target Start/End: Complemental strand, 11548647 - 11548576
Alignment:
Q  66 tgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||| ||||||||||  ||||| | |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  11548647 tgctatatatcaagaaaaattttctcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 11548576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 25986934 - 25986997
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcac 126  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||    
T  25986934 aatgctatatatcaagaaagattttattaagaaaatttcaagaatgacatggcaaaataatcac 25986997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 17176082 - 17176009
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| || |||  ||||||||||||||| || |||||||||| ||||||||    
T  17176082 aatgctatatatcaagaaagattttatcaataaaatttcaagaatgacatgacagaataatcacccttagattt 17176009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 17705526 - 17705453
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  || |||||||||||| || |||||||||| ||||||||    
T  17705526 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatcacccttagattt 17705453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 18365634 - 18365561
Alignment:
Q  64 aatgctagatatcaagaatgattttataagaaagatt-caagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| | ||| ||| |||||||||||||||| |||||||||| ||| ||||    
T  18365634 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaattt 18365561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 18370898 - 18370825
Alignment:
Q  64 aatgctagatatcaagaatgattttataagaaagatt-caagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| | ||| ||| |||||||||||||||| |||||||||| ||| ||||    
T  18370898 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaattt 18370825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 28675152 - 28675225
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| |  |||||||||| ||||||||    
T  28675152 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgtcggaataatcacccttagattt 28675225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 283
Target Start/End: Original strand, 18889683 - 18889719
Alignment:
Q  247 taaaatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||| ||||||||||||||||||||||    
T  18889683 taaaatctaagggttattattctgccatgtcattctt 18889719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 18889757 - 18889685
Alignment:
Q  64 aatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||   ||||||  |||||||||||||||||| |||||| ||| ||||||||    
T  18889757 aatgctatatatcaagaaagatttatcaagaaaatttcaagaatgacatggcagaataataacccttagattt 18889685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 2309294 - 2309260
Alignment:
Q  249 aaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||| |||||||||||||||    
T  2309294 aaatctaagggtgattattgtgccatgtcattctt 2309260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 11548460 - 11548426
Alignment:
Q  249 aaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||| |||||||||||||||    
T  11548460 aaatctaagggtgattattgtgccatgtcattctt 11548426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 29693639 - 29693673
Alignment:
Q  249 aaatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||| ||||||||||||||||||||||    
T  29693639 aaatctaagggtcattattctgccatgtcattctt 29693673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 9752278 - 9752233
Alignment:
Q  91 aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||| |||||||||||| |||||| |||||||||| ||||||||    
T  9752278 aagaaaaattcaagaatgatatggcagaataatcacccttagattt 9752233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 151; Significance: 7e-80; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 48119 - 47893
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||    
T  48119 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatagcacaataatcatctttagatttcagtctcatttattaatctttca 48020  T
Q  160 tnnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
    |         ||||||||||||| |||||||||||||||     |||||||  |||||||||| ||||||||||||||||||||||||||||||||||||    
T  48019 taaaaataaatacataacacccaccaccccatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaatct 47922  T
Q  255 aagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||    
T  47921 aagggtgattattctgccatgtcattctt 47893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 47854 - 47927
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||  ||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  47854 aatgctatttatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 47927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 7e-80; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 44094969 - 44094741
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  44094969 aaggaaaatgctagatatcaagaattattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatcttt 44094870  T
Q  158 catnnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
    |||         ||||||||||||| ||||||||||||||||| | ||  || |||||||||||||||||||||||||||| ||||||||||||||||||    
T  44094869 cataaagaaaaatacataacacccaccaccccatgatttccggccagactgagattttattggctaacattaatttcaggattatttcttgataaaatct 44094770  T
Q  255 aagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||    
T  44094769 aagggtgattattctgccatgtcattctt 44094741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 61 - 283
Target Start/End: Complemental strand, 40215257 - 40215031
Alignment:
Q  61 gaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  40215257 gaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatatttcat 40215158  T
Q  161 -nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
              ||||||||||||| |||||||||||||||     |||||||  ||||||||||||||||||||||||| |||||||||||||||||||||    
T  40215157 aaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgag--attttattggctaacattaatttcaagactatttcttgataaaatct 40215060  T
Q  255 aagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||    
T  40215059 aagggtgattattctgccatgtcattctt 40215031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 57 - 283
Target Start/End: Original strand, 36966500 - 36966730
Alignment:
Q  57 gaaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctt 156  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36966500 gaaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaataacatggcacaataatcacctttagatttcagtctcatttattaatctt 36966599  T
Q  157 tcat-nnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    ||||          ||||||||||||| ||||||||||||||||| | ||  || |||||||||| ||||||||||||||||||||||||||||||||||    
T  36966600 tcataaaaaaaagatacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatttcaggactatttcttgataaaat 36966699  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||| ||||||||    
T  36966700 ctaagggtgattattctgccatatcattctt 36966730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 25463946 - 25463719
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  25463946 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttaagtctcatttattaatctttca 25463847  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |          ||||||||||||| |||||||||||||||     |||||||  ||||||||||||||||||||||||| ||||||||||||||||||||    
T  25463846 taaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgag--attttattggctaacattaatttcaagactatttcttgataaaatc 25463749  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||    
T  25463748 taagggtgattattctgccatgtcattctt 25463719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 59 - 283
Target Start/End: Complemental strand, 19015675 - 19015447
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19015675 aggaaaatgctacatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 19015576  T
Q  159 at-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    ||          ||||||||||||| |||||||||||||||     |||||||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  19015575 atacaaaaaagatacataacacccaccaccccatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaat 19015478  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||| ||||||||    
T  19015477 ctaagggtgattattctgccatatcattctt 19015447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 6883757 - 6883530
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||    
T  6883757 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcataatattcacctttagatttcagtctcatttattaatctttca 6883658  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |          ||||||||||||| |||||||||||||||     |||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  6883657 taaaaaaaagatacataacacccaccaccccatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaatc 6883560  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||    
T  6883559 taagggtgattattctgccatgtcattctt 6883530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 25973677 - 25973457
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||    
T  25973677 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttaaatttcagtctcatttattaatctttca 25973578  T
Q  160 tnnnnnnnnntacataacacccatcaccccatgatttccggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaaggg 259  Q
    |         ||||||||||||| ||||||||||||| ||||  ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25973577 t-aaaaaaaatacataacacccaccaccccatgattttcggc-cagagattttattggctaacattaatttcaggattatttcttgataaaatctaaggg 25973480  T
Q  260 tgattattctgccatgtcattctt 283  Q
    ||||||||||||| ||||||||||    
T  25973479 tgattattctgcc-tgtcattctt 25973457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 58 - 283
Target Start/End: Original strand, 41876235 - 41876464
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  41876235 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatcttt 41876334  T
Q  158 cat-nnnnnnnnntacataacacccatcaccccatgattt-----ccggctgagaaattttattggctaacattaatttcaggactatttcttgataaaa 251  Q
    |||          ||||||||||||| |||||||||||||     | |||||||  |||||||||| |||||||||||||||||||||||||||||||||    
T  41876335 cataaaaaaaagatacataacacccaccaccccatgattttcggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaa 41876432  T
Q  252 tctaagggtgattattctgccatgtcattctt 283  Q
     |||||||||||||||||||||||||||||||    
T  41876433 cctaagggtgattattctgccatgtcattctt 41876464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 37821629 - 37821856
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  37821629 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 37821728  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgattt-----ccggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |          ||||||||||||| |||||||||||||     | |||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  37821729 taaaaaaaagatacataacacccaacaccccatgattttcggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaatc 37821826  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||| ||||||||    
T  37821827 taagggtgattattctgccatatcattctt 37821856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 51737777 - 51737548
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  51737777 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 51737678  T
Q  158 cat-nnnnnnnnntacataacacccatcaccccatgatt-----tccggctgagaaattttattggctaacattaatttcaggactatttcttgataaaa 251  Q
    |||          ||||||||||||| ||||||||||||     || |||||||  |||||||||| |||||||||||||||||||||||||||||||||    
T  51737677 cataaaaaaaagatacataacacccaccaccccatgattttcggtcaggctgag--attttattggttaacattaatttcaggactatttcttgataaaa 51737580  T
Q  252 tctaagggtgattattctgccatgtcattctt 283  Q
    | ||||||||||||||||||| | ||||||||    
T  51737579 tttaagggtgattattctgccttatcattctt 51737548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 3559887 - 3559660
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||| ||||||||| |||||||||||||||||    
T  3559887 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgatatgacacaataatcacctttatatttcagtctcatttattaatctttca 3559788  T
Q  160 tnnnnnnnnntaca-taacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |         |||| ||||||||| |||||||||||||||     |||||||  ||||||||||||||||||||||||| |||||||||||||||||||     
T  3559787 taaaaaaaaatacattaacacccaccaccccatgatttccgcccaggctgag--attttattggctaacattaatttcaagactatttcttgataaaatt 3559690  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||    
T  3559689 taagggtgattattctgccatgtcattctt 3559660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 18404720 - 18404485
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  18404720 aaggaaaatgctagatatcaagaatgattttataagaaagatttaagaatgacatggcacaataatcacatttagatttcagtctcatttattaatcttt 18404621  T
Q  158 cat-------nnnnnnnnntacataacacccatcaccccatgatttccggctga---gaaattttattggctaacattaatttcaggactatttcttgat 247  Q
    |||                ||||||||||||| ||||| |||||||||| |  |   || ||||||||||||||||||||||||||||||||||||||||    
T  18404620 cataaaataaaataaaaaatacataacacccaccaccctatgatttccgaccaaactgagattttattggctaacattaatttcaggactatttcttgat 18404521  T
Q  248 aaaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||| |||||||||||| |||||||||||||    
T  18404520 aaaatctaaaggtgattattctaccatgtcattctt 18404485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 9910086 - 9910315
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  9910086 ggaaaatgttagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagacttatttattaatctttca 9910185  T
Q  160 t---nnnnnnnnntacataacacccatcaccccatgatttccgg-----ctgagaaattttattggctaacattaatttcaggactatttcttgataaaa 251  Q
    |            | ||||||||||| |||||||||||||||||     |||||  |||||||||| |||||||||||||||||||||||||||||||||    
T  9910186 taaaaaaaaaagatgcataacacccaccaccccatgatttccggccatactgag--attttattggttaacattaatttcaggactatttcttgataaaa 9910283  T
Q  252 tctaagggtgattattctgccatgtcattctt 283  Q
    ||||||| ||||||||||||||||||||||||    
T  9910284 tctaaggttgattattctgccatgtcattctt 9910315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 58 - 253
Target Start/End: Original strand, 20304923 - 20305123
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  20304923 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatcaatcttt 20305022  T
Q  158 cat--nnnnnnnnntacataacacccatcaccccatgatttccggctga---gaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    |||           ||||||||||||| || |||||||||| ||||  |   || |||||||||||||||||||||||||||| ||||||||||||||||    
T  20305023 cataaaaaaaaaaatacataacacccaccatcccatgattttcggccaagctgagattttattggctaacattaatttcaggattatttcttgataaaat 20305122  T
Q  253 c 253  Q
    |    
T  20305123 c 20305123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 32000061 - 32000289
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |  |||||    
T  32000061 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattca--tttca 32000158  T
Q  160 t----nnnnnnnnntacataacacccatcaccccatgatttccggct---gagaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    |             ||||||||||||| |||||||||||||||||||    | | |||||||||||||||||||||||||| || |||||||||||||||    
T  32000159 taaaaaataaaaaatacataacacccaccaccccatgatttccggctcgacatagattttattggctaacattaatttcagtacaatttcttgataaaat 32000258  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||| |||||||| ||||||||||||    
T  32000259 ctaagggtggttattctgtcatgtcattctt 32000289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 58 - 283
Target Start/End: Original strand, 27523048 - 27523277
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctt 156  Q
    |||||||||| || ||||||||||||||||||| |||||||||||||||||   |||||| | |||||||| || ||||| ||||  |||||||||  ||    
T  27523048 aaggaaaatgttatatatcaagaatgattttatcaagaaagattcaagaatcgtatggcagattaatcaccctttgattttagtcttatttattaacttt 27523147  T
Q  157 tcatnnnnnnnnntacataacacccatcaccccatgatttccggct--ga-gaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    ||||         ||||||||||||||||||||||||||||||||   || || |||||||||||||||||||||||| |||| |||||||||||||||     
T  27523148 tcataaaaaaaaatacataacacccatcaccccatgatttccggccaggatgagattttattggctaacattaatttcgggacaatttcttgataaaatt 27523247  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||| ||||||||||||    
T  27523248 taagggtgattattctgtcatgtcattctt 27523277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 58 - 283
Target Start/End: Original strand, 33786424 - 33786657
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||   ||||    
T  33786424 aaggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt--ccttt 33786521  T
Q  158 cat-------nnnnnnnnntacataacacccatcaccccatgatttccggc---tgagaaattttattggctaacattaatttcaggactatttcttgat 247  Q
    |||                | ||||||| ||| ||||||||||||||||||     ||| |||||||||||||||||||||||||| || ||||||||||    
T  33786522 cataaaaaaaaaaaaaaaatgcataacatccaccaccccatgatttccggcccgacagagattttattggctaacattaatttcagtacaatttcttgat 33786621  T
Q  248 aaaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||| |||||||||||||| |||||||||||||||    
T  33786622 aaaatttaagggtgattattgtgccatgtcattctt 33786657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 62 - 283
Target Start/End: Complemental strand, 40273976 - 40273745
Alignment:
Q  62 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat- 160  Q
    ||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||   |||||||     
T  40273976 aaaatgctagatatcaagaatgatttatcaagaaatattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt--cctttcata 40273879  T
Q  161 --------nnnnnnnnntacataacacccatcaccccatgatttccggc---tgagaaattttattggctaacattaatttcaggactatttcttgataa 249  Q
                     ||||||||||||| ||||||||||||||||||     ||| |||||||||||||||||||||||||| || ||||||| ||||    
T  40273878 aaaaaaaaaaaaaataatacataacacccaccaccccatgatttccggcccgacagagattttattggctaacattaatttcagtacaatttcttaataa 40273779  T
Q  250 aatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||| || ||||||||||||    
T  40273778 aatctaagggtgattattttgacatgtcattctt 40273745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 62 - 283
Target Start/End: Original strand, 44690818 - 44691051
Alignment:
Q  62 aaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat 160  Q
    |||||| |||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||| |||||  |||||||||||||| ||    
T  44690818 aaaatgttagatatcaataatgattttatcaagaaagattcaagaatgacatggcagaataatcacccttagattccagtcttatttattaatcttttat 44690917  T
Q  161 --------nnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataa 249  Q
                     ||||||||||||| ||||||||||||||||| | ||  || |||||||||||||||||||||||  |||  ||||||||||||    
T  44690918 aaaaaataaaaaataaatacataacacccaacaccccatgatttccggccagactgagattttattggctaacattaattttgggataatttcttgataa 44691017  T
Q  250 aatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||| || ||||||||||||||| ||||||    
T  44691018 aatctaagagttattattctgccatgtaattctt 44691051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 60 - 136
Target Start/End: Original strand, 19722894 - 19722970
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19722894 ggaaaatgttagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacctttagattt 19722970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 209 - 283
Target Start/End: Original strand, 16045746 - 16045820
Alignment:
Q  209 ttttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  16045746 ttttattggctaacattaatttcaagaatatttcttgataaaatctaagggtgattattctgccatgtcattctt 16045820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 10167672 - 10167443
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaag-attcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctt 156  Q
    |||||||||| || |||| |||||||||||||||| |||  ||| |||||| | |||  ||||||||||||||||||||||||||  |||||||||| ||    
T  10167672 aaggaaaatgttacatattaagaatgattttataaaaaaatatttaagaataatatgatacaataatcacctttagatttcagtcttatttattaatttt 10167573  T
Q  157 tcatnnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    ||||         |||| ||||| || ||  |||| |||||||| | ||   ||||||||||||||||||||||||| | ||| |||| |||||||||||    
T  10167572 tcataaaaaaaaatacacaacacacaccaaaccataatttccggtcagaccaaaattttattggctaacattaatttaaagacaattttttgataaaatc 10167473  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    |||   ||||||||||  ||||||||||||    
T  10167472 taaaaatgattattctatcatgtcattctt 10167443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 33786696 - 33786623
Alignment:
Q  63 aaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  33786696 aaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttaaattt 33786623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 52064373 - 52064445
Alignment:
Q  61 gaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttag 132  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| || |||| ||||| ||||    
T  52064373 gaaaatgctagatatcaaaaatgattttatcaagaaagattcaagaatgacatgacagaatattcacccttag 52064445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 34519874 - 34519815
Alignment:
Q  210 tttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattct 269  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||  |||||||||    
T  34519874 tttattggctaacattaatttcaggacaattttttgataaaatctaaggtcgattattct 34519815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 254
Target Start/End: Complemental strand, 51621085 - 51621002
Alignment:
Q  170 tacataacacccatcaccccatgatttccgg-ctgagaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
    ||||||||| ||| ||||||||||||||||  ||||||  |||||||| |||||||||||||| |||||||||||| |||||||||    
T  51621085 tacataacatccaccaccccatgatttccgatctgaga--ttttattgactaacattaatttctggactatttcttaataaaatct 51621002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 16045859 - 16045786
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  16045859 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 16045786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 40214992 - 40215065
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  40214992 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 40215065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 40273706 - 40273779
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||||||||||| |||||| | |||||| |||||||||||||||| || |||||||||| ||||||||    
T  40273706 aatgctagatatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatcacccttagattt 40273779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 18404446 - 18404519
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||| | |||||||||||||||||||    
T  18404446 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatcacctttagattt 18404519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 25463680 - 25463753
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  25463680 aatgctatatatcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatcacccttagattt 25463753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 44094702 - 44094775
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| ||||||||||  ||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  44094702 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 44094775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 6883491 - 6883564
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||| ||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  6883491 aatgctatatattaagaaagatttttttaagaaaatttcaagaatgacatggcagaataatcacccttagattt 6883564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 9910354 - 9910281
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||| | ||||||||    
T  9910354 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcaaccttagattt 9910281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 19015408 - 19015481
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||| |||||| |||||||||| ||||||||    
T  19015408 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 19015481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 32000328 - 32000255
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | |||||| |||||||||||||||| || ||||| |||| ||||||||    
T  32000328 aatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatgacagaataaccacccttagattt 32000255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 36966769 - 36966696
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||| |||||| |||||||||| ||||||||    
T  36966769 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 36966696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 37821895 - 37821822
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||| |||||| |||||||||| ||||||||    
T  37821895 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 37821822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 44690892 - 44690859
Alignment:
Q  250 aatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||||||    
T  44690892 aatctaagggtgattattctgccatgtcattctt 44690859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 52329508 - 52329464
Alignment:
Q  97 gattcaagaatgacatggcacaataatcacctttagatttcagtc 141  Q
    |||||||||||||||| ||| |||||||||| |||||||||||||    
T  52329508 gattcaagaatgacatagcagaataatcacccttagatttcagtc 52329464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 32000137 - 32000103
Alignment:
Q  249 aaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||| |||||||||||||||    
T  32000137 aaatctaagggtgattattgtgccatgtcattctt 32000103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 33786502 - 33786468
Alignment:
Q  249 aaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||| |||||||||||||||    
T  33786502 aaatctaagggtgattattgtgccatgtcattctt 33786468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 40273902 - 40273936
Alignment:
Q  249 aaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||| |||||||||||||||    
T  40273902 aaatctaagggtgattattgtgccatgtcattctt 40273936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 52329469 - 52329503
Alignment:
Q  249 aaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||| |||||||||||    
T  52329469 aaatctaagggtgattattctgctatgtcattctt 52329503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 3559621 - 3559694
Alignment:
Q  64 aatgctagatatcaagaatgattttataagaaagattc-aagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| | ||| |||  ||||||||||||||| |||||||||| ||| ||||    
T  3559621 aatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttaaattt 3559694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 44691082 - 44691017
Alignment:
Q  72 atatcaagaatgattttataagaaa-gattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||| |||||||||| ||| ||||||||||| |||||||| |||||| ||  ||||||||    
T  44691082 atatcaagaaagattttataaaaaaagattcaagaattacatggcagaataataactcttagattt 44691017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 152
Target Start/End: Original strand, 22157333 - 22157425
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaa 152  Q
    ||||||||||||||||||| ||||| ||  || ||  |||| ||||||||||||| | |||||||||  ||| |||||| ||  |||||||||    
T  22157333 ggaaaatgctagatatcaaaaatgaattcttatgatggatttaagaatgacatgggagaataatcacacttaaatttcaatcttatttattaa 22157425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 149; Significance: 1e-78; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 59 - 283
Target Start/End: Complemental strand, 4892473 - 4892245
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4892473 aggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 4892374  T
Q  159 a-tnnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    | |         ||||||||||||| |||||||||||||||     |||||||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  4892373 attaaaagaagatacataacacccaccaccccatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaat 4892276  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||||    
T  4892275 ctaagggtgattattctgccatgtcattctt 4892245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 59 - 283
Target Start/End: Complemental strand, 14138938 - 14138711
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  14138938 aggaaaatgctagatattaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttc 14138839  T
Q  159 atnnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    ||         ||||||||||||| |||||||||||||||     |||||||  |||||||||||||||||||||||||||||||||||||||||||||     
T  14138838 ataaaaaaaaatacataacacccaccaccccatgatttccgatcaggctgag--attttattggctaacattaatttcaggactatttcttgataaaatt 14138741  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||| ||||||    
T  14138740 taagggtgattattctgccatgtaattctt 14138711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 8145643 - 8145418
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8145643 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 8145544  T
Q  160 tnnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
    |         ||||||||||||| || ||||||||||||     |||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||    
T  8145543 taaaaaaaaatacataacacccacca-cccatgatttccgaccaggctgag--attttattggctaacattagtttcaagactatttcttgataaaatct 8145447  T
Q  255 aagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||    
T  8145446 aagggtgattattctgccatgtcattctt 8145418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 25398510 - 25398281
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25398510 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaacaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 25398411  T
Q  158 cat-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaa 251  Q
    |||          ||||||||||||| |||||||||||||||     |||||||  |||||||||| |||||||||||||||||||||||||||||||||    
T  25398410 cataaaaaaaagatacataacacccaccaccccatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaa 25398313  T
Q  252 tctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||||    
T  25398312 tctaagggtgattattctgccatgtcattctt 25398281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 33584124 - 33584351
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33584124 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 33584223  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |          ||||||||||||| |||||||||||||||     |||||||  |||||||||| ||||||||||||||||||||||||||||||||||     
T  33584224 taaaaaaaagatacataacacccaccaccccatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaatt 33584321  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||    
T  33584322 taagggtgattattctgccatgtcattctt 33584351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 59 - 283
Target Start/End: Original strand, 37321587 - 37321815
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37321587 aggaaaatgctagatatcaagaatgattttataagaaatattcaagaatgaaatggcacaataatcacctttagatttcagtctcatttattaatctttc 37321686  T
Q  159 at-nnnnnnnnntacataacacccatcaccccatgatttccggct-ga--gaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
    ||          ||||||||||||| ||||||||||||||||||| ||  || ||||||||||||||||||||||||| |||||||| |||||||||| |    
T  37321687 ataaataaaaaatacataacacccaccaccccatgatttccggctagactgagattttattggctaacattaatttcaagactatttattgataaaattt 37321786  T
Q  255 aagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||    
T  37321787 aagggtgattattctgccatgtcattctt 37321815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 59 - 280
Target Start/End: Original strand, 3521801 - 3522025
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3521801 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 3521900  T
Q  159 atnnnnnnnnntacataacacccatcaccccatgatttccggctga---gaaattttattggctaacattaatttcaggactatttcttgataaaatcta 255  Q
    ||         ||||||||||||| ||||||||||||||||||  |    | |||||||||| ||||||||||||||| |||||||||||||||||||||    
T  3521901 ataaaaaaagatacataacacccaccaccccatgatttccggccaaactaagattttattggttaacattaatttcagaactatttcttgataaaatcta 3522000  T
Q  256 agggtgattattctgccatgtcatt 280  Q
    | |||||||||||||||||||||||    
T  3522001 atggtgattattctgccatgtcatt 3522025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 6043307 - 6043533
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6043307 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 6043406  T
Q  160 tnnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
    |         ||||||||||||| |||||||||||||||     |||||||  |||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  6043407 taaaaaaaaatacataacacccaacaccccatgatttccggccaggctgag--attttattggttaatattaatttcagcactatttcttgataaaatct 6043504  T
Q  255 aagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||| |||||||||||||    
T  6043505 aagggtgattattcttccatgtcattctt 6043533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 2477906 - 2477679
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  2477906 ggaaaatgctagatatcaagaatgattttataagaaagatctaagaatgacatggcacaatgatcacctttagatttcagtcttatttattaatctttca 2477807  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgatttccggc---tgagaaattttattggctaacattaatttcaggactatttcttgataaaatcta 255  Q
    |          ||||||||||||| ||||||||||||||||||      |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  2477806 taaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgaaattttattgactaacattaatttcaagactatttcttgataaaatcta 2477707  T
Q  256 agggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||    
T  2477706 agggtgattattctgccatgtcattctt 2477679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 63 - 280
Target Start/End: Complemental strand, 12851069 - 12850847
Alignment:
Q  63 aaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat-- 160  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||      
T  12851069 aaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcataa 12850970  T
Q  161 nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatcta 255  Q
             ||||||||||||| |||||||||||||||     |||||||  |||||||||| |||||||||||||||||||||||||||||||||||||    
T  12850969 aaaagaaaatacataacacccaccaccccatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaatcta 12850872  T
Q  256 agggtgattattctgccatgtcatt 280  Q
    |||||| ||||||||||||||||||    
T  12850871 agggtggttattctgccatgtcatt 12850847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 61 - 283
Target Start/End: Complemental strand, 3363048 - 3362821
Alignment:
Q  61 gaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat 160  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||    
T  3363048 gaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataaccacctttagatttcagtctcatttattaatctttcat 3362949  T
Q  161 --nnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaatcta 255  Q
               ||||||||||||| ||||||||||||||||| | ||  || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  3362948 aaaaaaaaagatacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatttcaggactatttcttgataaaatcta 3362849  T
Q  256 agggtgattattctgccatgtcattctt 283  Q
    |||||| |||||||||||||||||||||    
T  3362848 agggtggttattctgccatgtcattctt 3362821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 81 - 283
Target Start/End: Original strand, 11360947 - 11361153
Alignment:
Q  81 atgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcatnnnnnnnnn-tacataacac 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||  |||||||||||||||||          ||||||||||    
T  11360947 atgattttataagaaagattcaagaatgacatggcacaataatcatctttagatttcaatctaatttattaatctttcatacaaaaaaaatacataacac 11361046  T
Q  180 ccatcaccccatgatttccggc-----tgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccat 274  Q
    ||| ||||||||||||||||||     |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11361047 ccaccaccccatgatttccggccaggctgaga--ttttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccat 11361144  T
Q  275 gtcattctt 283  Q
    |||||||||    
T  11361145 gtcattctt 11361153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 38899520 - 38899748
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaaga-ttcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  38899520 ggaaaatgctagatatcaagaatgattttataaaaaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttc 38899619  T
Q  159 at-nnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
    ||          || |||||||||| ||||||||||||| ||| | ||  || |||||||||| ||||||||||||||||||||||||||||||||||||    
T  38899620 ataaaaaaaagatatataacacccaccaccccatgattttcggccagactgagattttattggttaacattaatttcaggactatttcttgataaaatct 38899719  T
Q  255 aagggtgattattctgccatgtcattctt 283  Q
    ||||||| |||||||||||||||||||||    
T  38899720 aagggtggttattctgccatgtcattctt 38899748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 22912852 - 22913076
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||  ||| |||    
T  22912852 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt--tctctca 22912949  T
Q  160 tnnnnnnnnntacataacacccatcaccccatgatttccggc---tgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaa 256  Q
    |         ||||||||| ||| |||||||||||||| |||     ||| |||||||||||||||||||||||||| || |||||||||||||||||||    
T  22912950 taaaaaaaaatacataacatccaccaccccatgatttctggcccgacagagattttattggctaacattaatttcagtacaatttcttgataaaatctaa 22913049  T
Q  257 gggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||    
T  22913050 gggtgattattctgccatgtcattctt 22913076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 4433845 - 4434029
Alignment:
Q  102 aagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcatnnnnnnnnntacataacacccatcaccccatgatttccggc 201  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||         ||||||||||||| || |||||||||||||||    
T  4433845 aagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttcataaaaaaaaatacataacacccaccatcccatgatttccggc 4433944  T
Q  202 t-ga--gaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 283  Q
      ||  || |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4433945 cagactgagattttattggttaacattaatttcagaactatttcttgataaaatctaagggtgattattctgccatatcattctt 4434029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 59 - 283
Target Start/End: Original strand, 12614531 - 12614755
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||| |||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  12614531 aggaaaatgctagatatcaagtatgattttatcaaaaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaaccttt 12614630  T
Q  158 cat---nnnnnnnnntacataacacccatcaccccatgatttccggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
    |||             | |||||||||| || ||||| |   | |||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  12614631 cataaaaaaaaaaaaaaaataacacccaccatcccataa--acaggctgag--attttattggctaacattaatttcaggacaatttcttgataaaatct 12614726  T
Q  255 aagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||| || ||||||||||||    
T  12614727 aagggtgattattatgtcatgtcattctt 12614755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 91 - 283
Target Start/End: Original strand, 31640767 - 31640962
Alignment:
Q  91 aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcatnnnnnnnnntacataacacccatcacccca 190  Q
    |||||||||||||||||||||||||| |||||||  |||||||||    ||  ||||||||| |||||||         ||||||||||||| |||||||    
T  31640767 aagaaagattcaagaatgacatggcagaataatcgactttagattgatatcttatttattaacctttcataaaaaaaaatacataacacccaccacccca 31640866  T
Q  191 tgatttccggc-----tgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||     |||||  |||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  31640867 tgatttccggccaggctgaga--ttttattggctaacattaatttcatgacaatttcttgataaaatctaagggtggttattctgccatgtcattctt 31640962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 59 - 283
Target Start/End: Original strand, 17545476 - 17545707
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    |||||||||||||||||||||||||||||   || ||| ||| |||||||||||| ||||||||||| | ||||||||||||| ||||||||   |||||    
T  17545476 aggaaaatgctagatatcaagaatgatttatcaaaaaatatttaagaatgacatgacacaataatcatccttagatttcagtctcatttattc--ctttc 17545573  T
Q  159 atnnnnnnnnntaca------taacacccatcaccccatgatttccggctg---agaaattttattggctaacattaatttcaggactatttcttgataa 249  Q
    |          || |      ||||||||| ||||||||||||||||||     ||| ||||||||| |||||||||||||||| || ||||||||||||    
T  17545574 aataaaaaaaataaaaataaataacacccaccaccccatgatttccggcccgacagagattttattgactaacattaatttcagtacaatttcttgataa 17545673  T
Q  250 aatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  17545674 aatctaatggtgattattctgccatgtcattctt 17545707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 77 - 283
Target Start/End: Complemental strand, 27482077 - 27481869
Alignment:
Q  77 aagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttc-agtcacatttattaatctttcatnnnnnnnnn-taca 173  Q
    |||||||||||||| || |||||||||||||||||||  || |||||||||||||||||||  | ||  ||||||||| |||| ||          ||||    
T  27482077 aagaatgattttatcaaaaaagattcaagaatgacataacagaataatcacctttagatttttaatcttatttattaaccttttataaaaaaaaaataca 27481978  T
Q  174 taacacccatcaccccatgatttccggct--ga-gaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctg 270  Q
    ||||||||| |||||||||||||||| ||  || |||||||||||||||||||||||||||  ||| ||||||| |||||| ||||  |||||||||       
T  27481977 taacacccaccaccccatgatttccgactaggatgaaattttattggctaacattaatttcgtgacaatttcttcataaaa-ctaaatgtgattatt--- 27481882  T
Q  271 ccatgtcattctt 283  Q
    |||||||||||||    
T  27481881 ccatgtcattctt 27481869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 12614794 - 12614721
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||||| ||||||||    
T  12614794 aatgctatatatcaagaaatattttatcaagaaagattcaagaatgacatgacataataatcacccttagattt 12614721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 22913115 - 22913042
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  22913115 aatgctatatatcaagaaagattttttcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 22913042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 2477640 - 2477713
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  2477640 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 2477713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 6043572 - 6043499
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||| | |||||||||| ||||||||    
T  6043572 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggaagaataatcacccttagattt 6043499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 8145387 - 8145452
Alignment:
Q  72 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  8145387 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 8145452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 11361192 - 11361119
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  11361192 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 11361119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 10458409 - 10458469
Alignment:
Q  72 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcaccttta 131  Q
    ||||||||||  ||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  10458409 atatcaagaaaaattttatcaagaaaaattcaagaatgacatggcaaaataatcaccttta 10458469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 3362782 - 3362855
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  | |||||||||||||||| ||||| |||| ||||||||    
T  3362782 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 3362855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 4434068 - 4433995
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||| |||||| |||||||||| ||||||||    
T  4434068 aatgctatatatcaagaaagatttttttaagaaaatttcaagaatgatatggcagaataatcacccttagattt 4433995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 4892206 - 4892279
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  4892206 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 4892279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 17545718 - 17545673
Alignment:
Q  91 aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  17545718 aagaaaaattcaagaatgacatggcagaataatcaccattagattt 17545673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 25398242 - 25398315
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  25398242 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 25398315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 31640973 - 31640928
Alignment:
Q  91 aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||||||||||||||||||| ||||| |||| ||||||||    
T  31640973 aagaaagattcaagaatgacatggcagaataaccacccttagattt 31640928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 38899787 - 38899714
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  | |||||||||||||||| ||||| |||| ||||||||    
T  38899787 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 38899714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 13664792 - 13664736
Alignment:
Q  97 gattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaat 153  Q
    |||||||||||||||||  | |||||||||| |||||||||||||  ||||||||||    
T  13664792 gattcaagaatgacatgatagaataatcacccttagatttcagtcttatttattaat 13664736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 236
Target Start/End: Original strand, 36880267 - 36880298
Alignment:
Q  205 gaaattttattggctaacattaatttcaggac 236  Q
    ||||||||||||||||||||||||||||||||    
T  36880267 gaaattttattggctaacattaatttcaggac 36880298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 22912928 - 22912894
Alignment:
Q  249 aaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||| |||||||||||||||    
T  22912928 aaatctaagggtgattattgtgccatgtcattctt 22912894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 3522059 - 3521994
Alignment:
Q  72 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||| |||||| | ||||||  ||||| |||||||||||| |||||||||| ||||||||    
T  3522059 atatcaagaaagattttttcaagaaaatttcaaaaatgacatggcagaataatcaccattagattt 3521994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 12850805 - 12850878
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  | ||| |||||||||||| ||||| |||| ||||||||    
T  12850805 aatgctatatatcaagaaagattttatcaagaaaattccaaaaatgacatggcagaataaccacccttagattt 12850878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 33584390 - 33584317
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  || ||||||||||||||| |||||||||| ||| ||||    
T  33584390 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 33584317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 90
Target Start/End: Complemental strand, 12614511 - 12614483
Alignment:
Q  62 aaaatgctagatatcaagaatgattttat 90  Q
    |||||||||||||||||||||||||||||    
T  12614511 aaaatgctagatatcaagaatgattttat 12614483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 148; Significance: 4e-78; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 53123303 - 53123074
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  53123303 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatcttt 53123204  T
Q  158 cat-nnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |||          ||||||||||||| ||||||||||||||||| | ||  || |||||||||| |||||||||||||||||||||||||||||||||||    
T  53123203 catacaaaaaagatacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatttcaggactatttcttgataaaatc 53123104  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||    
T  53123103 taagggtgattattctgccatgtcattctt 53123074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 46442116 - 46441887
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  46442116 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 46442017  T
Q  158 cat-nnnnnnnnntacataacacccatcaccccatgatttccggc-----tgagaaattttattggctaacattaatttcaggactatttcttgataaaa 251  Q
    |||          ||||||||||||| ||||||||||||||||||     ||||  |||||||||| |||||||||||||||||||||||||||||||||    
T  46442016 cataaaaaaaagatacataacacccaccaccccatgatttccggccaggttgag--attttattggttaacattaatttcaggactatttcttgataaaa 46441919  T
Q  252 tctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||| |||||||||||||||    
T  46441918 tctaagggtgattattttgccatgtcattctt 46441887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 59 - 283
Target Start/End: Original strand, 21802114 - 21802344
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||    
T  21802114 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaatctttc 21802213  T
Q  159 atnnnnnnnnntacataacac---ccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    ||         ||||||||||   ||| ||||||||||||||||| | ||  || ||||||||||||||||||||||||||||| |||||||||||||||    
T  21802214 ataaaaaaaaatacataacacccaccaccaccccatgatttccggccagactgagattttattggctaacattaatttcaggacaatttcttgataaaat 21802313  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||||    
T  21802314 ctaagggtgattattctgccatgtcattctt 21802344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 36073619 - 36073393
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36073619 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 36073520  T
Q  160 tnnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
    |         ||||||||||||| |||||||||||||||     |||||||  |||||||||| |||||||||||||| || |||||||||||||||| |    
T  36073519 taaaaaaagatacataacacccaccaccccatgatttccggtcaggctgag--attttattggttaacattaatttcatgaatatttcttgataaaattt 36073422  T
Q  255 aagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||    
T  36073421 aagggtgattattctgccatgtcattctt 36073393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 62 - 283
Target Start/End: Complemental strand, 9089138 - 9088913
Alignment:
Q  62 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat- 160  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||     
T  9089138 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttcata 9089039  T
Q  161 nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatcta 255  Q
             ||||||||||||| |||||||||||||||     |||||||  |||||||||| |||||||||||||||||||||||||||||||||||||    
T  9089038 caaaaaagatacataacacccaccaccccatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaatcta 9088941  T
Q  256 agggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||    
T  9088940 agggtgattattctgccatgtcattctt 9088913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 58 - 283
Target Start/End: Original strand, 31078612 - 31078841
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||    
T  31078612 aaggaaaatgctagatatcaagaatgattttataaaaaaaattcaagaatgacatggcacaataatcatctttagatttcaatctcatttattaatcttt 31078711  T
Q  158 cat-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaa 251  Q
    |||          |||||||||||||||||||||||||||||     |||||||  |||||||||| |||||||||||||||||||||||||||||||||    
T  31078712 cataaaaaaaagatacataacacccatcaccccatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaa 31078809  T
Q  252 tctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||||    
T  31078810 tctaagggtgattattctgccatgtcattctt 31078841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 47290338 - 47290109
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||    
T  47290338 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattattcttt 47290239  T
Q  158 cat-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaa 251  Q
    |||          ||||||||||||| |||||||||||||||     |||||||  |||||||||| |||||||||||||||||||||||||||||||||    
T  47290238 cataaaaaaaagatacataacacccaccaccccatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaa 47290141  T
Q  252 tctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||||    
T  47290140 tctaagggtgattattctgccatgtcattctt 47290109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 59 - 283
Target Start/End: Original strand, 7744906 - 7745134
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||    
T  7744906 aggaaaatgttagatatcaagaatgattttataagaaagattcaagaatgacattgcacaataatcacctttagatttcaatctcatttattaatatttc 7745005  T
Q  159 at-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    ||          ||||||||||||| |||||||||||||||     |||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  7745006 ataaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgag--attttattggctaacattaatttcaggactatttcttgataaaat 7745103  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||||    
T  7745104 ctaagggtgattattctgccatgtcattctt 7745134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 59 - 283
Target Start/End: Original strand, 10442581 - 10442811
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacattta-ttaatcttt 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  10442581 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatttaatcttt 10442680  T
Q  158 c--atnnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaa 250  Q
    |  |           |||||||||||| |||||||||||||||     |||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  10442681 caaaaaaaaaaaaaaacataacacccaccaccccatgatttccggccaggctgag--attttattggctaacattaatttcaggactatttcttgataaa 10442778  T
Q  251 atctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||||||    
T  10442779 atctaagggtgattattctgccatgtcattctt 10442811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 58 - 283
Target Start/End: Original strand, 49387680 - 49387910
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    |||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  49387680 aaggaaaatgttagatatcaaggatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 49387779  T
Q  158 cat--nnnnnnnnntacataacacccatcaccccatgatttccggct---gagaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    |||           ||||||||| ||| |||||||||||||||||||     || |||||||||| ||||||||||||||||||||||||||||||||||    
T  49387780 cataaaaaaaaagatacataacatccaccaccccatgatttccggctaggctgagattttattggttaacattaatttcaggactatttcttgataaaat 49387879  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||||    
T  49387880 ctaagggtgattattctgccatgtcattctt 49387910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 22199531 - 22199304
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22199531 aaggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 22199432  T
Q  158 catnnnnnnnnntacataacacccatcaccccatgattt-----ccggctgagaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    |||         ||||||||||||| || ||||||||||     | |||||||  ||||||||||||||||||| ||||| |||||||||||||||||||    
T  22199431 cataaaaaaaaatacataacacccacca-cccatgatttctggccaggctgag--attttattggctaacattagtttcaagactatttcttgataaaat 22199335  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    |||||| ||||||||||||||||||||||||    
T  22199334 ctaaggctgattattctgccatgtcattctt 22199304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 59 - 283
Target Start/End: Original strand, 44893007 - 44893235
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44893007 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 44893106  T
Q  159 at-nnnnnnnnntacataacacccatcaccccatgattt-----ccggctgagaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    ||          ||||||||||||| || ||||||||||     | |||||||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  44893107 ataaaaaaaagatacataacacccaccatcccatgattttcggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaat 44893204  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||||    
T  44893205 ctaagggtgattattctgccatgtcattctt 44893235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 44893696 - 44893469
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  44893696 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 44893597  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgattt-----ccggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |          ||||||||||||| || ||||||||||     | |||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  44893596 taaaaaaaagatacataacacccaccatcccatgattttcggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaatc 44893499  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||    
T  44893498 taagggtgattattctgccatgtcattctt 44893469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 36073223 - 36072990
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  36073223 aaggaaaatgctagatatcaaaaatgattttataagaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatcttt 36073124  T
Q  158 cat-----nnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataa 249  Q
    |||              ||||||||||||| ||||||||||||||||| | ||  || |||||||||| |||||||||||||||||||||||||||||||    
T  36073123 cataaaaaaaaaaaagatacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatttcaggactatttcttgataa 36073024  T
Q  250 aatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||| |||||||||||||||||||||    
T  36073023 aatctaagggtggttattctgccatgtcattctt 36072990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 4751719 - 4751489
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  4751719 aaggaaaatgctagatatcaagaataattttataagaaaaatttaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatcttt 4751620  T
Q  158 cat--nnnnnnnnntacataacacccatcaccccatgatttccg-gctga--gaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    |||           ||||||||||||| ||||||||||||||||  | ||  || |||||||||| ||||||||||||||||||||||||||||||||||    
T  4751619 cataaaaaagaaaatacataacacccaccaccccatgatttccgaccagactgagattttattggttaacattaatttcaggactatttcttgataaaat 4751520  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||| |||||||||||||||||||||    
T  4751519 ctaagggtggttattctgccatgtcattctt 4751489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 62 - 283
Target Start/End: Complemental strand, 24128507 - 24128282
Alignment:
Q  62 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat- 160  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||     
T  24128507 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttcata 24128408  T
Q  161 nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatcta 255  Q
             ||||||||| ||| |||||||||||||||     |||||||  |||||||||| |||||||||||||||||||||||||||||||||||||    
T  24128407 aaaaaaagatacataacatccaccaccccatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaatcta 24128310  T
Q  256 agggtgattattctgccatgtcattctt 283  Q
    ||| ||||||||||||||||||||||||    
T  24128309 aggatgattattctgccatgtcattctt 24128282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 2625109 - 2624880
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  2625109 aaggaaaatgttagatatcaagaatgattttataagaaagattcaaaaatgacatagcacaataatcacctttagatttcagtctcatttattaatcttt 2625010  T
Q  158 cat-nnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |||          ||||||||||||| ||| ||||||||||||| | ||  || |||||||||  |||||||||||||| || |||||||||||||||||    
T  2625009 cataaaaaaaaaatacataacacccaccactccatgatttccggccagactgagattttattgattaacattaatttcatgattatttcttgataaaatc 2624910  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||| ||||||||    
T  2624909 taagggtgattattctgccatttcattctt 2624880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 59 - 283
Target Start/End: Original strand, 50156373 - 50156600
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||| || |||||||||| ||||||||||||| ||||||||||||||||    
T  50156373 aggaaaatgttagatatcaagaatgattttataagaaaaattcaagaatgacatgacataataatcacc-ttagatttcagtctcatttattaatctttc 50156471  T
Q  159 at-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    ||          ||||||||||||| |||||||||||||||     |||||||  |||||||||| |||||||||||| | |||||||||||||||||||    
T  50156472 ataaaaaaaagatacataacacccaccaccccatgatttccggccaggctgag--attttattggttaacattaattttatgactatttcttgataaaat 50156569  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||||    
T  50156570 ctaagggtgattattctgccatgtcattctt 50156600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 33530479 - 33530710
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  33530479 ggaaaatgctagatatcaagaatgattttataaaaaagatccaagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttca 33530578  T
Q  160 t------nnnnnnnnntacataacacccatcaccccatgatttccggc---tgagaaattttattggctaacattaatttcaggactatttcttgataaa 250  Q
    |                |||||||||||| || |||||||||||||||      |||||||||||||||||||||| ||||| |||||||||||||||||    
T  33530579 taaaaaaaataaaaaaaacataacacccacca-cccatgatttccggccaggctgaaattttattggctaacattagtttcaagactatttcttgataaa 33530677  T
Q  251 atctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||||||    
T  33530678 atctaagggtgattattctgccatgtcattctt 33530710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 62 - 283
Target Start/End: Complemental strand, 17655699 - 17655473
Alignment:
Q  62 aaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat 160  Q
    |||||||||||||| |||||||||||||| |||||||||| |||||||||||| || |||||| ||||||||||||||||| |||||||||| |||||||    
T  17655699 aaaatgctagatattaagaatgattttatcaagaaagatttaagaatgacatgacataataattacctttagatttcagtctcatttattaacctttcat 17655600  T
Q  161 nnnnnnnnntacata--acacccatcaccccatgatttccggc-----tgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
             ||||||  |||||||||| |||||||||||||||     |||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  17655599 aaaaaaaa-tacatataacacccatcatcccatgatttccggccaggctgaga--ttttattggctaacattaatttcaggactatttcttgataaaatc 17655503  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||    
T  17655502 taagggtgattattctgccatgtcattctt 17655473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 70 - 283
Target Start/End: Original strand, 23964269 - 23964487
Alignment:
Q  70 agatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat--nnnnnnn 167  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||| || ||||||||||||||||||             
T  23964269 agatatcaagaatgattttataagaaagatttaagaatgacatggcataataatcatctttagatttcaatctcatttattaatctttcataaaaaaaaa 23964368  T
Q  168 nntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtga 262  Q
      ||||||||||||| |||| ||||||||||     |||||||  ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  23964369 aatacataacacccaccaccgcatgatttccggtcaggctgag--attttattgactaacattaatttcaagactatttcttgataaaatctaagggtga 23964466  T
Q  263 ttattctgccatgtcattctt 283  Q
    |||||||||||||||||||||    
T  23964467 ttattctgccatgtcattctt 23964487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 42671939 - 42671712
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||   |||||||| |||| ||||| |||| |||||    
T  42671939 ggaaaatgttagatatcaagaatgattttatcaagaaagattcaagaatgacatgacataataatcattcttagatttgagtctcatttgttaacctttc 42671840  T
Q  159 atnnnnnnnnntacataacacccatcaccccatgatttccggctga---gaaattttattggctaacattaatttcaggactatttcttgataaaatcta 255  Q
     |          ||||||||| ||||||||||| |||||||||  |   || |||||||||| |||||||||||| ||||| ||||||||||||||||||    
T  42671839 gtaaaaaaaaaaacataacactcatcaccccataatttccggccaaattgagattttattggttaacattaattttaggacaatttcttgataaaatcta 42671740  T
Q  256 agggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||    
T  42671739 agggtgattattctgccatgtcattctt 42671712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 283
Target Start/End: Original strand, 37934735 - 37934963
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||| ||||||| | || ||||||||| ||||||||||||| ||||| ||| ||||||||||||| |||||||||| || |||||||||| ||||    
T  37934735 aggaaaatgttagatattatgactgattttattaagaaagattcaataatgatatgacacaataatcacccttagatttcaatctcatttattaaccttt 37934834  T
Q  158 catnnnnnnnnntacataacacccatcaccccatgatttccggct-ga--gaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
    |||         ||||||||| ||| || ||||| ||||||| |  ||  || |||||||||| |||||||||||||||||  |||||||||||||||||    
T  37934835 cataaaaaaaaatacataacaaccaccatcccataatttccgaccagactgagattttattggttaacattaatttcaggataatttcttgataaaatct 37934934  T
Q  255 aagggtgattattctgccatgtcattctt 283  Q
    |||||||| |||||| |||||||||||||    
T  37934935 aagggtgagtattctaccatgtcattctt 37934963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 62 - 283
Target Start/End: Complemental strand, 24392942 - 24392710
Alignment:
Q  62 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcatn 161  Q
    ||||||||||||||||||||||||||   |||||| ||| ||||||||||| |||||||||||| | ||||||||||||| ||||||||   |||||||     
T  24392942 aaaatgctagatatcaagaatgatttatcaagaaatatttaagaatgacatagcacaataatcatccttagatttcagtctcatttattc--ctttcata 24392845  T
Q  162 nnnnnnnn----------tacataacacccatcaccccatgatttccggctg---agaaattttattggctaacattaatttcaggactatttcttgata 248  Q
                      ||||||||||||||||||||||||||||||||     ||| ||||||||| |||||||||||||||| || |||||||||||    
T  24392844 aaaaaaataaaaaaaaaatacataacacccatcaccccatgatttccggcccgacagagattttattgactaacattaatttcagtacaatttcttgata 24392745  T
Q  249 aaatctaagggtgattattctgccatgtcattctt 283  Q
    |||| ||||||||||||||||||||||||||||||    
T  24392744 aaatttaagggtgattattctgccatgtcattctt 24392710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 58 - 280
Target Start/End: Complemental strand, 37219904 - 37219671
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctt 156  Q
    |||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||| | |||||||||| ||  ||||||||| |||    
T  37219904 aaggaaaatgttagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatcatccttagatttcaatcttatttattaacctt 37219805  T
Q  157 tc-------atnnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttga 246  Q
    ||       ||         ||||||||| ||||||||| ||||||||||| | ||  || ||||||||| ||||||||||||||||||| |||||||||    
T  37219804 tcataaaaaataaaaaaaaatacataacatccatcacccaatgatttccggccagactgagattttattgactaacattaatttcaggacaatttcttga 37219705  T
Q  247 taaaatctaagggtgattattctgccatgtcatt 280  Q
    |||||| |||| ||||||||| | ||||||||||    
T  37219704 taaaatttaagagtgattattttaccatgtcatt 37219671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 91 - 280
Target Start/End: Complemental strand, 30563448 - 30563255
Alignment:
Q  91 aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat-nnnnnnnnntacataacacccatcacccc 189  Q
    ||||||||||||||||||||||| ||||||||||||  |||||||||||||  ||||||||| |||||||          ||||||||||||| ||||||    
T  30563448 aagaaagattcaagaatgacatgacacaataatcacacttagatttcagtcttatttattaacctttcataaaaaaaaaatacataacacccaccacccc 30563349  T
Q  190 atgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcatt 280  Q
    |||||||||     |||||||  ||||||||||| |||||||||| |||||  ||||||||||||||||||| | ||| ||||||||| |||||||    
T  30563348 atgatttccggccaggctgag--attttattggccaacattaattgcaggataatttcttgataaaatctaaagatgactattctgccgtgtcatt 30563255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 57 - 282
Target Start/End: Original strand, 11314043 - 11314255
Alignment:
Q  57 gaaggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatct 155  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||| |||||||  ||||  ||||||||| ||    
T  11314043 gaaggaaaatgctagatatcaagaatgattttatcaagaaagatgcaagaatgacatgacacaataatcacccttagattatagtcttatttattaacct 11314142  T
Q  156 ttcatnnnnnnnnntacataacacccatcaccccatgatttccggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatcta 255  Q
    || |          |||||||       ||||||||||||| ||||     ||  ||||||||||||||||||||||| || ||||||||||| ||||||    
T  11314143 ttta---aaaaaagtacataa-------caccccatgattttcggc----caagcttattggctaacattaatttcagaacaatttcttgatataatcta 11314228  T
Q  256 agggtgattattctgccatgtcattct 282  Q
    ||| ||||||||||| |||||||||||    
T  11314229 aggatgattattctgtcatgtcattct 11314255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 280
Target Start/End: Complemental strand, 44744698 - 44744481
Alignment:
Q  61 gaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat 160  Q
    ||||||| |||||||||| ||||||||||| |   |||||||||||||||||| | ||||||| | | |||||||||||||  ||||||||| || | |     
T  44744698 gaaaatgttagatatcaaaaatgattttatca---agattcaagaatgacatgactcaataattatccttagatttcagtcttatttattaacctat-ac 44744603  T
Q  161 nnnnnnnnntacataacacccatcaccccatgatttccggctgaga---aattttattggctaacattaatttcaggactatttcttgataaaatctaag 257  Q
             ||||||||||||| ||||| ||||||||||||  |||   |||||||| | ||||||| ||||||||||| |||| |||||||||| ||||    
T  44744602 aaaaaaaaatacataacacccaccaccctatgatttccggcc-agactgaattttatcgactaacatcaatttcaggacaattttttgataaaatttaag 44744504  T
Q  258 ggtgattattctgccatgtcatt 280  Q
    |||||||||||| ||||||||||    
T  44744503 ggtgattattctaccatgtcatt 44744481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 60 - 126
Target Start/End: Original strand, 25063369 - 25063436
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcac 126  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  25063369 ggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatggtagaataatcac 25063436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 283
Target Start/End: Original strand, 36073650 - 36073765
Alignment:
Q  171 acataacacccatcaccccatgatttccggctga---gaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattatt 267  Q
    ||||||||| || ||||||||||||||||||  |   || |||||||||||||| |||||||| ||||| ||||||| |||||||||||  |||||||||    
T  36073650 acataacacgcaccaccccatgatttccggccaaactgagattttattggctaatattaattttaggacaatttcttcataaaatctaaaagtgattatt 36073749  T
Q  268 ctgccatgtcattctt 283  Q
     || ||||||||||||    
T  36073750 ttgtcatgtcattctt 36073765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 33530749 - 33530676
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  33530749 aatgctatatatcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 33530676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 10442850 - 10442777
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  10442850 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 10442777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 31078880 - 31078807
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  31078880 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 31078807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 49387949 - 49387876
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  49387949 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 49387876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 2624841 - 2624914
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||| |||||| |||||||||| ||||||||    
T  2624841 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgaaatggcagaataatcacccttagattt 2624914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 7745173 - 7745100
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  7745173 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 7745100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 21802383 - 21802310
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| ||||||||||  ||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  21802383 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 21802310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 22199265 - 22199338
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||| | ||||||||    
T  22199265 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcagccttagattt 22199338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 24392671 - 24392744
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | |||||| ||||||||||||||||||| |||||||||| ||| ||||    
T  24392671 aatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcacccttaaattt 24392744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 36072951 - 36073024
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| ||||| |||| ||||||||    
T  36072951 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataaccacccttagattt 36073024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 152
Target Start/End: Original strand, 36073256 - 36073349
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaa 152  Q
    |||||||||||||||  || ||||||||||| |||||||||| |||||||| ||| || |||||| ||  |||||||||||||  |||||||||    
T  36073256 ggaaaatgctagatactaaaaatgattttatcaagaaagatttaagaatgatatgccagaataattactcttagatttcagtcttatttattaa 36073349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 46441848 - 46441921
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  46441848 aatgctatatatcaagaaagatttttttaagaaaatttcaagaatgacatggcaaaataatcacccttagattt 46441921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 47290070 - 47290143
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  47290070 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 47290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 136
Target Start/End: Complemental strand, 36073795 - 36073731
Alignment:
Q  73 tatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||||| |||||||| |||||||||| |||||||||||| || ||||||||| |||||||||    
T  36073795 tatcaagaaagattttatgaagaaagatttaagaatgacatgacaaaataatcacttttagattt 36073731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 53123034 - 53123108
Alignment:
Q  64 aatgctagatatcaagaatgattttat--aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| |  ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  53123034 aatgctatatatcaagaaagattttttcaaagaaaatttcaagaatgacatggcagaataatcacccttagattt 53123108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 4751450 - 4751523
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  | |||||||||||||||| ||||| |||| ||||||||    
T  4751450 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 4751523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 9111416 - 9111337
Alignment:
Q  178 acccatcaccccatgatttccggctg---agaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
    ||||||||||||||||||| ||||     |||||||||||||| |||| ||||||||  ||| |||||||||||||||||    
T  9111416 acccatcaccccatgattttcggccaggtagaaattttattggttaactttaatttcgagacaatttcttgataaaatct 9111337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 24128243 - 24128316
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||| | ||||||||    
T  24128243 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcatccttagattt 24128316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 36073354 - 36073427
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||| ||||    
T  36073354 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttaaattt 36073427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 44893430 - 44893503
Alignment:
Q  64 aatgctagatatcaagaatgattttataagaaagatt-caagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | | ||| ||| |||||||||||||||| |||||||||| ||||||||    
T  44893430 aatgctatatatcaagaaagattttttcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 44893503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 136
Target Start/End: Original strand, 42671675 - 42671746
Alignment:
Q  66 tgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||| ||||||| || |||||||| || ||| ||| ||||||||||||||| |||||||||| ||||||||    
T  42671675 tgctatatatcaataaagattttatcaaaaaaaatttaagaatgacatggcagaataatcacccttagattt 42671746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 17655461 - 17655507
Alignment:
Q  90 taagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||    
T  17655461 taagaaaatttcaagaatgacatggcagaataatcacccttagattt 17655507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 37219825 - 37219859
Alignment:
Q  249 aaatctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||| ||||||||||||||||||||||||    
T  37219825 aaatctaaggatgattattctgccatgtcattctt 37219859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 9088910 - 9088947
Alignment:
Q  99 ttcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  9088910 ttcaagaatgacatggcagaataatcacccttagattt 9088947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 23964518 - 23964453
Alignment:
Q  72 atatcaagaatgattttataagaaagattc-aagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||| |||||||| | ||| |||  ||||||||||||||| |||||||||| ||||||||    
T  23964518 atatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttagattt 23964453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 44893238 - 44893201
Alignment:
Q  99 ttcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  44893238 ttcaagaatgacatggcagaataatcacccttagattt 44893201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 50156639 - 50156566
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||| ||||| |||||| | ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  50156639 aatgctatatattaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 50156566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 147; Significance: 2e-77; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 41280 - 41054
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  41280 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgatatggtacaataatcacctttagatttcagtctcatttattaatctttca 41181  T
Q  160 tnnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
    |         ||||||||||||| |||||||||||||||     |||||||  ||||||||||||||||||||||||| |||||||||||||||||||||    
T  41180 taaaaaaaaatacataacacccaccaccccatgatttccggccaggctgag--attttattggctaacattaatttcaagactatttcttgataaaatct 41083  T
Q  255 aagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||    
T  41082 aagggtgattattctgccatgtcattctt 41054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 41015 - 41088
Alignment:
Q  64 aatgctagatatcaagaatgattttataagaaagatt-caagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| | ||| ||| |||||||||||||||| |||||||||| ||||||||    
T  41015 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 41088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 146; Significance: 6e-77; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 23267857 - 23268084
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23267857 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 23267956  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaatcta 255  Q
    |          ||||||||||||| ||||||||||||||||| | ||  || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  23267957 taaaaaaaagatacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatttcaggactatttcttgataaaatcta 23268056  T
Q  256 agggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||    
T  23268057 agggtgattattctgccatgtcattctt 23268084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 63 - 283
Target Start/End: Original strand, 31174633 - 31174856
Alignment:
Q  63 aaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcatnn 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||| || ||||||||||||||||||      
T  31174633 aaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataaactcctttagatttcaatctcatttattaatctttcataa 31174732  T
Q  163 nnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaatctaaggg 259  Q
           ||||||||||||| ||||||||||||||||| | ||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31174733 aaaaaaatacataacacccaccaccccatgatttccggtcagactgagattttattggctaacattaatttcaggactatttcttgataaaatctaaggg 31174832  T
Q  260 tgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||    
T  31174833 tgattattctgccatgtcattctt 31174856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 33380477 - 33380250
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33380477 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 33380378  T
Q  160 -tnnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
     |         ||||||||||||| |||||||||||||||     |||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  33380377 ttaaaaaaagatacataacacccaccaccccatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaatc 33380280  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||| ||||||||||||||    
T  33380279 taagggtgattattcagccatgtcattctt 33380250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 35161029 - 35160800
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35161029 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 35160930  T
Q  160 t---nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaa 251  Q
    |            ||||||||||||| |||||||||||||||     |||||||  |||||||||| |||||||||||||||||||||||||||||||||    
T  35160929 taaaaaaaaaagatacataacacccaccaccccatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaa 35160832  T
Q  252 tctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||||    
T  35160831 tctaagggtgattattctgccatgtcattctt 35160800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 9293370 - 9293598
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||    
T  9293370 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaatctttca 9293469  T
Q  160 t--nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    |           ||||||||||||| |||||||||||||||     |||||||  ||||||||||||||||||||||||||||| |||||||||||||||    
T  9293470 taaaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgag--attttattggctaacattaatttcaggacaatttcttgataaaat 9293567  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||||    
T  9293568 ctaagggtgattattctgccatgtcattctt 9293598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 64 - 283
Target Start/End: Complemental strand, 3989342 - 3989119
Alignment:
Q  64 aatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat-nn 162  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||       
T  3989342 aatgctagatatcaagaatgattttataagaaagatccaagaatgacatgacacaataataacctttagatttcagtctcatttattaatctttcataaa 3989243  T
Q  163 nnnnnnntacataacacccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaatctaaggg 259  Q
           ||||||||||||| ||||||||||||||||| | ||  || ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3989242 aaaaaaatacataacacccaccaccccatgatttccggccagactgagattttattggctaacattaatttcaagactatttcttgataaaatctaaggg 3989143  T
Q  260 tgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||    
T  3989142 tgattattctgccatgtcattctt 3989119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 10662158 - 10661930
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  10662158 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 10662059  T
Q  160 t--nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    |           ||||||||||||| ||||| |||||||||     |||||||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  10662058 taaaaaaaaagatacataacacccaccaccctatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaat 10661961  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||||    
T  10661960 ctaagggtgattattctgccatgtcattctt 10661930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 13355120 - 13354889
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  13355120 aaggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacttttagatttcagtctcatttattaatcttt 13355021  T
Q  158 cat--nnnnnnnnntacataacacccatcaccccatgatttccggc----tgagaaattttattggctaacattaatttcaggactatttcttgataaaa 251  Q
    |||           ||||||||||||| ||| ||||||||||||||      ||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  13355020 cataaaaaaaaaaatacataacacccaccactccatgatttccggccaggctagagattttattggctaacattaatttcaagactatttcttgataaaa 13354921  T
Q  252 tctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||| ||||||||||||| ||||||||    
T  13354920 tctaagggtaattattctgccatatcattctt 13354889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 60 - 283
Target Start/End: Original strand, 7475303 - 7475530
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| || |||||||||||||||||||||||| |||||||||||||||||    
T  7475303 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgatatgacataataatcacctttagatttcagtctcatttattaatctttca 7475402  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |          ||||||||||||| |||||||||||||||     |||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  7475403 taaaaaaaagatacataacacccaccaccccatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaatc 7475500  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||  ||||||||||||    
T  7475501 taagggtgattattctatcatgtcattctt 7475530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 59 - 283
Target Start/End: Complemental strand, 43331183 - 43330955
Alignment:
Q  59 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctt-t 157  Q
    |||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||  |||  |    
T  43331183 aggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattcctctcat 43331084  T
Q  158 catnnnnnnnnntacataacacccatcaccccatgatttccggctg---agaaattttattggctaacattaatttcaggactatttcttgataaaatct 254  Q
     |          ||||||||||||| ||||||||||||||||||     |||||||||||||||||||||||||||||| || |||||||||||||||||    
T  43331083 aaaaaaaaaaaatacataacacccaccaccccatgatttccggcccgacagaaattttattggctaacattaatttcagtacaatttcttgataaaatct 43330984  T
Q  255 aagggtgattattctgccatgtcattctt 283  Q
    |||||||||||||||||||||||||||||    
T  43330983 aagggtgattattctgccatgtcattctt 43330955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 91 - 283
Target Start/End: Complemental strand, 21936321 - 21936124
Alignment:
Q  91 aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcatnnnnnnnnn-tacataacacccatcacccc 189  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||          ||||||||||||| ||||||    
T  21936321 aagaatgatccaagaatgacatggcacaataatcacctttagatttcagtttcatttattaatctttcataaaaaaaaaatacataacacccaccacccc 21936222  T
Q  190 atgatttccggctg----agaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||      ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21936221 atgatttccggccaggctagagattttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatatcattctt 21936124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 9723677 - 9723448
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttc 158  Q
    |||||||| ||||||||||||||||||| || |||||| ||| |||||||||||| || ||||||||||||||||||||||||  ||||||| |  ||||    
T  9723677 ggaaaatgttagatatcaagaatgatttgatcaagaaatatttaagaatgacatgacagaataatcacctttagatttcagtcttatttattcacttttc 9723578  T
Q  159 atnnnnnnnnn--tacataacacccatcaccccatgatttccggctgag----aaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
    ||           ||||||||||||| ||||||||||||||||| ||||    | |||||||| ||||||||||||||| |||| |||||||||||||||    
T  9723577 ataaaaaaaaaaatacataacacccaccaccccatgatttccgg-tgaggctgagattttattagctaacattaatttcgggacaatttcttgataaaat 9723479  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
     ||||||||||||||||| ||||||||||||    
T  9723478 ttaagggtgattattctgtcatgtcattctt 9723448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 62 - 283
Target Start/End: Original strand, 21393483 - 21393710
Alignment:
Q  62 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcatn 161  Q
    ||||||||||||||||||||||||||   |||||| |||||||||||||||| ||||||||||||| ||| ||||||||| ||||||||   |||||||     
T  21393483 aaaatgctagatatcaagaatgatttatcaagaaa-attcaagaatgacatgacacaataatcacccttaaatttcagtctcatttattc--ctttcata 21393579  T
Q  162 nnnnnnnn------tacataacacccatcaccccatgatttccggctg---agaaattttattggctaacattaatttcaggactatttcttgataaaat 252  Q
                  ||||||||||||| ||||||||||||||||||     | | |||||||||| ||||||||||||||| || |||||||||||||||    
T  21393580 aaaaaaataaaaaatacataacacccaccaccccatgatttccggcccgacatagattttattggttaacattaatttcagtacaatttcttgataaaat 21393679  T
Q  253 ctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||| |||||||||||||    
T  21393680 ctaagggtgattattctaccatgtcattctt 21393710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 100 - 283
Target Start/End: Original strand, 14941199 - 14941388
Alignment:
Q  100 tcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcatnnnnnnnnn----tacataacacccatcaccccatgatt 195  Q
    |||||||||||||| ||||||||||| | |||||||||| ||  ||||||||| |||||||             ||||||||||||| |||| |||||||    
T  14941199 tcaagaatgacatgacacaataatcatccttagatttcaatcttatttattaacctttcataaaataaaaaaaatacataacacccaccacctcatgatt 14941298  T
Q  196 tccggc-----tgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 283  Q
    || |||     |||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14941299 tctggccaggctgaga---tttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattctt 14941388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 58 - 160
Target Start/End: Complemental strand, 22592985 - 22592880
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttaga--tttcagtcacatttattaatc 154  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||  ||||||||  ||||||||| |    
T  22592985 aaggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttttcagtcttatttattaacc 22592886  T
Q  155 tttcat 160  Q
    ||||||    
T  22592885 tttcat 22592880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 283
Target Start/End: Complemental strand, 27847791 - 27847675
Alignment:
Q  170 tacataacacccatcaccccatgatttccgg-----ctgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgatt 264  Q
    ||||||||||||| |||||||||||||| ||     ||||||  |||||||| ||||||||||||||||||| |||| |||||||||||||| |||||||    
T  27847791 tacataacacccaccaccccatgatttctggtcaggctgaga--ttttattgactaacattaatttcaggacaattttttgataaaatctaacggtgatt 27847694  T
Q  265 attctgccatgtcattctt 283  Q
    |||||| ||||||||||||    
T  27847693 attctgtcatgtcattctt 27847675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 283
Target Start/End: Complemental strand, 22591639 - 22591525
Alignment:
Q  172 cataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattat 266  Q
    ||||| ||||| |||||||||||||||     ||||||||  |||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||    
T  22591639 cataatacccaccaccccatgatttcctgctaggctgaga--ttttattggctaacattaatttcaggacaatttcttaataaaatttaagggggattat 22591542  T
Q  267 tctgccatgtcattctt 283  Q
    |||||||| ||||||||    
T  22591541 tctgccatatcattctt 22591525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 91 - 269
Target Start/End: Original strand, 16767288 - 16767480
Alignment:
Q  91 aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat-----------nnnnnnnnntacataacac 179  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||||||| |||||||||| |||||||                    ||||||||||    
T  16767288 aagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttcataaaataaaataaaataaaaatacataacac 16767387  T
Q  180 ccatcaccccatgatttccgg-ctga--gaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattct 269  Q
    ||| ||||| ||||||||||| | ||  || ||||||||||||||||||||||||||||  ||||||||||||||| |||| |||||||||||    
T  16767388 ccaccaccctatgatttccggccagactgagattttattggctaacattaatttcaggataatttcttgataaaatttaagagtgattattct 16767480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 14941427 - 14941354
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| ||||||||    
T  14941427 aatgctatatatcaagaaagattttattaagaaagattcaagaatgacatggcagaataatcacccttagattt 14941354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 34320961 - 34321042
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttatt 150  Q
    |||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  34320961 aaggaaaatgctagatatcaagaatgatttt-----------tcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 34321042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 283
Target Start/End: Complemental strand, 37335829 - 37335756
Alignment:
Q  210 tttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||| |||| || |||| |||||| |||||||  |||||||||||||||||||||||||    
T  37335829 tttattggctaacattaatatcagaacaattttttgatacaatctaaaagtgattattctgccatgtcattctt 37335756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 58 - 254
Target Start/End: Original strand, 40262529 - 40262729
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||||  |||  | ||  |||||||||||||||||| | |||||| ||  ||||||||||||   |||| ||||  |||    
T  40262529 aaggaaaatgctagatatcaagaatggattttcacgatggattcaagaatgacatggtagaataataactcttagatttcagttttatttgttaacgttt 40262628  T
Q  158 cat-nnnnnnnnntacataacacccatcaccccatgatttccgg---ctgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |||          ||||||||||||| |||||||| ||||||||     | || |||||||||||||| ||||||||| |||| ||||||||||||||||    
T  40262629 cataaaaaataaatacataacacccaccaccccataatttccggtcagggtgagattttattggctaatattaatttcgggacaatttcttgataaaatc 40262728  T
Q  254 t 254  Q
    |    
T  40262729 t 40262729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 9293637 - 9293564
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  9293637 aatgctatatatcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatcacccttagattt 9293564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 37335894 - 37335824
Alignment:
Q  81 atgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttatt 150  Q
    |||||||||| |||||||||| || ||||||||| |||| |||||||| ||||||||||||| ||||||||    
T  37335894 atgattttatcaagaaagatttaataatgacatgacacagtaatcacccttagatttcagtctcatttatt 37335824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 10661891 - 10661964
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  10661891 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 10661964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 21936085 - 21936158
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||| |||||| |||||||||| ||||||||    
T  21936085 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 21936158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 23268123 - 23268050
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  23268123 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 23268050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 27847644 - 27847709
Alignment:
Q  72 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||| ||||| |||||||| ||||||||||||||||||||||| || |||||||||| ||||||||    
T  27847644 atataaagaaagattttattaagaaagattcaagaatgacatgacagaataatcaccgttagattt 27847709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 31174887 - 31174822
Alignment:
Q  72 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  31174887 atatcaagaaagattttattaagaaaatttcaagaatgacatggcagaataatcacccttagattt 31174822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 35160761 - 35160834
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  35160761 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 35160834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 37335744 - 37335789
Alignment:
Q  90 taagaaagattcaagaatgacatggcacaataatcacctttagatt 135  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  37335744 taagaaagattcaagaatgacatggcagaataatcacttttagatt 37335789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 39819317 - 39819272
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaaga 105  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||    
T  39819317 ggaaaatgttagatatcaagaatgattttataagaaaaattcaaga 39819272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 43330916 - 43330989
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | || ||| ||||||||||||||||||| |||||||||| ||||||||    
T  43330916 aatgctatatatcaagaaagattttctcaaaaaaaattcaagaatgacatggcagaataatcacccttagattt 43330989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 9723409 - 9723482
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||| ||||| |||||||| |||||||||| |||||||||||| || |||||||||| ||| ||||    
T  9723409 aatgctatatattaagaaagattttattaagaaagatttaagaatgacatgacagaataatcacccttaaattt 9723482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 3205768 - 3205804
Alignment:
Q  16 cacttgttttcatacaaaactgaatccaaaaatattt 52  Q
    |||||||||||||| ||||||||||||||||||||||    
T  3205768 cacttgttttcatataaaactgaatccaaaaatattt 3205804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 27847833 - 27847791
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttat-aagaaagat 99  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  27847833 aaggaaaatgctagatatcaagaataattttatcaagaaagat 27847791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 34321028 - 34320994
Alignment:
Q  249 aaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||| |||||||||||||||    
T  34321028 aaatctaagggtgattattgtgccatgtcattctt 34320994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 7475569 - 7475496
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||  | |||||||||| ||||||||    
T  7475569 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgatagaataatcacccttagattt 7475496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 13354858 - 13354923
Alignment:
Q  72 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||| |||||||| ||||||  ||||||||||| |||||| |||||| ||| ||||||||    
T  13354858 atatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataattacccttagattt 13354923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 21393749 - 21393676
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| ||||||||||  ||||| | |||||| ||| ||||||||||||| | |||||||||| ||||||||    
T  21393749 aatgctatatatcaagaaaaattttctcaagaaaaatttaagaatgacatggtagaataatcacccttagattt 21393676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 33380211 - 33380284
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  || ||||||||||||||  |||||||||| ||||||||    
T  33380211 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggctgaataatcacccttagattt 33380284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 142; Significance: 2e-74; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 26208 - 25979
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  26208 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 26109  T
Q  158 cat-nnnnnnnnntacataacacccatcaccccatgatttccgg-----ctgagaaattttattggctaacattaatttcaggactatttcttgataaaa 251  Q
    |||          ||||||||||||| || ||||||||||||||     |||||  |||||||||| ||||||||||||||| |||||||||||||||||    
T  26108 cataaaaaaaagatacataacacccaccatcccatgatttccggccagcctgag--attttattggttaacattaatttcagaactatttcttgataaaa 26011  T
Q  252 tctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||||    
T  26010 tctaagggtgattattctgccatgtcattctt 25979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 16256 - 16027
Alignment:
Q  58 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatcttt 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  16256 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatcttt 16157  T
Q  158 cat-nnnnnnnnntacataacacccatcaccccatgatttccgg-----ctgagaaattttattggctaacattaatttcaggactatttcttgataaaa 251  Q
    |||          ||||||||||||| || ||||||||||||||     |||||  |||||||||| ||||||||||||||| |||||||||||||||||    
T  16156 cataaaaaaaagatacataacacccaccatcccatgatttccggccagcctgag--attttattggttaacattaatttcagaactatttcttgataaaa 16059  T
Q  252 tctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||||    
T  16058 tctaagggtgattattctgccatgtcattctt 16027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 127 - 283
Target Start/End: Complemental strand, 8605 - 8445
Alignment:
Q  127 ctttagatttcagtcacatttattaatctttcatnnnnnnnnn-tacataacacccatcaccccatgatttccggc-----tgagaaattttattggcta 220  Q
    ||||||||||||||| ||||||||||||||||||          ||||||||||||| || |||||||||||||||     |||||  ||||||||| ||    
T  8605 ctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccatcccatgatttccggccagcctgaga--ttttattggtta 8508  T
Q  221 acattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8507 acattaatttcagaactatttcttgataaaatctaagggtgattattctgccatgtcattctt 8445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 8414 - 8479
Alignment:
Q  72 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  8414 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 8479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 15996 - 16061
Alignment:
Q  72 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  15996 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 16061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 25948 - 26013
Alignment:
Q  72 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  25948 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 26013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 136; Significance: 6e-71; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 4666 - 4439
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4666 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgatatggcacaataatcacctttagatttcagtctcatttattaatctttca 4567  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgattt-----ccggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |          ||||||||||||| |||||||||||||     | |||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  4566 taaaaaacagatacataacacccaccaccccatgattttcggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaatc 4469  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||||    
T  4468 taagggtgattattctgccatgtcattctt 4439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 4400 - 4473
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  4400 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 4473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 126; Significance: 5e-65; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 62 - 283
Target Start/End: Complemental strand, 13110 - 12885
Alignment:
Q  62 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttcat- 160  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||     
T  13110 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttcata 13011  T
Q  161 nnnnnnnnntacataacacccatcaccccatgatttcc-----ggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatcta 255  Q
             ||||||||| ||| |||||||||||||||     |||||||  |||||||||| |||||||||||||||||||||||||||||||||||||    
T  13010 aaaaaaagatacataacatccaccaccccatgatttccggccaggctgag--attttattggttaacattaatttcaggactatttcttgataaaatcta 12913  T
Q  256 agggtgattattctgccatgtcattctt 283  Q
    ||| ||||||||||||||||||||||||    
T  12912 aggatgattattctgccatgtcattctt 12885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 12846 - 12919
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||| | ||||||||    
T  12846 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcatccttagattt 12919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 124; Significance: 9e-64; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 11891 - 11664
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcacatttattaatctttca 159  Q
    |||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11891 ggaaaatgttagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 11792  T
Q  160 t-nnnnnnnnntacataacacccatcaccccatgattt-----ccggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatc 253  Q
    |          |||||||||| || |||||||||||||     | |||||||  |||||||||| |||||||||||||| ||||||||||||||||||||    
T  11791 taaaaaaaaaatacataacactcaccaccccatgattttcggccaggctgag--attttattggttaacattaatttcatgactatttcttgataaaatc 11694  T
Q  254 taagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||| ||||||||||||    
T  11693 taagggtgattattctgtcatgtcattctt 11664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 11625 - 11698
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||||| ||||||||    
T  11625 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 11698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 170 - 283
Target Start/End: Complemental strand, 3222 - 3111
Alignment:
Q  170 tacataacacccatcaccccatgatttccggctgagaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattct 269  Q
    ||||||||||||| ||||| ||||||| |||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3222 tacataacacccaccaccctatgattttcggctgaga--ttttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattct 3125  T
Q  270 gccatgtcattctt 283  Q
    ||||||||||||||    
T  3124 gccatgtcattctt 3111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 3072 - 3145
Alignment:
Q  64 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 136  Q
    ||||||| |||||||||| |||||||| || |||  || ||||||||||||||| |||||||||| ||||||||    
T  3072 aatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatcacccttagattt 3145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 85544 - 85469
Alignment:
Q  208 attttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 283  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  85544 attttattggctaacattaatttcaggataatttcttcataaaatttaaggatgattattctgccatgtcattctt 85469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 85642 - 85577
Alignment:
Q  60 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcac 126  Q
    |||||||||||||||||||||||||||| ||  |||||||| || ||| ||||||||||||||||||    
T  85642 ggaaaatgctagatatcaagaatgatttgat-tgaaagattaaaaaataacatggcacaataatcac 85577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University