View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4419_low_29 (Length: 256)

Name: NF4419_low_29
Description: NF4419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4419_low_29
NF4419_low_29
[»] chr7 (38 HSPs)
chr7 (1-130)||(48651484-48651613)
chr7 (131-252)||(35137533-35137654)
chr7 (129-241)||(7389387-7389499)
chr7 (129-252)||(8080362-8080485)
chr7 (131-252)||(4999493-4999614)
chr7 (131-252)||(38267040-38267161)
chr7 (127-252)||(38837213-38837338)
chr7 (128-252)||(40957704-40957828)
chr7 (130-244)||(3434561-3434675)
chr7 (130-236)||(36361908-36362014)
chr7 (131-252)||(19329842-19329963)
chr7 (134-252)||(3783998-3784116)
chr7 (130-236)||(36362025-36362131)
chr7 (132-252)||(32951472-32951592)
chr7 (129-236)||(19436182-19436289)
chr7 (131-234)||(21234401-21234504)
chr7 (129-252)||(36208171-36208294)
chr7 (134-252)||(3694370-3694488)
chr7 (130-250)||(46033782-46033902)
chr7 (154-240)||(8238236-8238322)
chr7 (136-252)||(35522881-35522997)
chr7 (129-240)||(38044195-38044306)
chr7 (131-226)||(46374807-46374902)
chr7 (131-240)||(32564417-32564526)
chr7 (127-235)||(35468851-35468959)
chr7 (130-196)||(22343360-22343426)
chr7 (130-240)||(41915740-41915850)
chr7 (128-197)||(10343597-10343666)
chr7 (128-252)||(11044185-11044299)
chr7 (127-252)||(18207176-18207300)
chr7 (131-240)||(40846104-40846213)
chr7 (130-252)||(26296643-26296765)
chr7 (131-252)||(39255903-39256023)
chr7 (131-187)||(31735884-31735940)
chr7 (154-213)||(2318261-2318320)
chr7 (161-210)||(16374845-16374894)
chr7 (131-252)||(41423682-41423803)
chr7 (165-233)||(27744307-27744375)
[»] chr1 (32 HSPs)
chr1 (131-252)||(9474855-9474976)
chr1 (127-241)||(8346378-8346492)
chr1 (127-252)||(38595150-38595275)
chr1 (128-252)||(2581912-2582036)
chr1 (134-252)||(44548355-44548473)
chr1 (131-252)||(3000319-3000440)
chr1 (130-252)||(41758804-41758926)
chr1 (130-252)||(51898662-51898784)
chr1 (131-252)||(27564714-27564835)
chr1 (131-252)||(47452299-47452420)
chr1 (129-252)||(38632300-38632423)
chr1 (130-252)||(50630457-50630579)
chr1 (131-252)||(43132-43253)
chr1 (131-236)||(48716277-48716382)
chr1 (128-252)||(32813244-32813368)
chr1 (131-252)||(37649198-37649319)
chr1 (128-241)||(23597081-23597194)
chr1 (161-236)||(13414791-13414866)
chr1 (153-236)||(45044555-45044638)
chr1 (129-244)||(26274430-26274545)
chr1 (132-220)||(11152389-11152476)
chr1 (127-240)||(5958991-5959104)
chr1 (131-240)||(50590991-50591100)
chr1 (129-252)||(49811506-49811629)
chr1 (161-244)||(26440764-26440847)
chr1 (156-225)||(44334176-44334245)
chr1 (136-252)||(44453984-44454100)
chr1 (153-252)||(6260892-6260991)
chr1 (130-236)||(37926433-37926539)
chr1 (158-236)||(48489328-48489405)
chr1 (131-196)||(41608528-41608593)
chr1 (157-213)||(750239-750294)
[»] chr8 (34 HSPs)
chr8 (131-241)||(15197333-15197443)
chr8 (131-252)||(12831047-12831168)
chr8 (131-252)||(34012275-34012396)
chr8 (129-252)||(14547920-14548043)
chr8 (131-252)||(504100-504221)
chr8 (127-252)||(5957826-5957951)
chr8 (130-252)||(37038478-37038600)
chr8 (131-252)||(40423922-40424043)
chr8 (128-235)||(10284627-10284734)
chr8 (131-241)||(23122587-23122697)
chr8 (131-252)||(1179919-1180040)
chr8 (130-252)||(44507066-44507188)
chr8 (153-235)||(8841428-8841510)
chr8 (131-237)||(15048176-15048281)
chr8 (136-252)||(10621066-10621182)
chr8 (129-252)||(4854842-4854965)
chr8 (129-252)||(15258908-15259031)
chr8 (131-252)||(43414560-43414681)
chr8 (127-240)||(16383373-16383486)
chr8 (131-199)||(20074966-20075034)
chr8 (129-196)||(34307214-34307281)
chr8 (175-252)||(9122229-9122306)
chr8 (131-235)||(38229429-38229532)
chr8 (127-190)||(24307625-24307688)
chr8 (129-240)||(24307784-24307895)
chr8 (131-213)||(14055610-14055692)
chr8 (130-235)||(17443824-17443929)
chr8 (131-196)||(30479509-30479574)
chr8 (129-252)||(42221513-42221636)
chr8 (127-240)||(16056392-16056505)
chr8 (130-235)||(32032724-32032828)
chr8 (132-170)||(9122196-9122234)
chr8 (157-199)||(42197369-42197410)
chr8 (157-221)||(29705465-29705528)
[»] chr6 (20 HSPs)
chr6 (127-241)||(15832573-15832687)
chr6 (131-252)||(32869678-32869799)
chr6 (134-252)||(22880637-22880755)
chr6 (130-252)||(11427615-11427739)
chr6 (131-252)||(17598554-17598675)
chr6 (128-252)||(6209444-6209568)
chr6 (131-236)||(29857827-29857932)
chr6 (127-241)||(23128117-23128231)
chr6 (131-241)||(31109390-31109500)
chr6 (130-252)||(31976247-31976369)
chr6 (127-236)||(31110756-31110863)
chr6 (128-240)||(30341351-30341463)
chr6 (129-240)||(15990033-15990144)
chr6 (131-240)||(15508015-15508124)
chr6 (131-235)||(31953026-31953130)
chr6 (135-236)||(28536483-28536582)
chr6 (127-252)||(12732478-12732603)
chr6 (153-240)||(4231570-4231657)
chr6 (136-235)||(9379708-9379807)
chr6 (127-252)||(946372-946497)
[»] chr5 (30 HSPs)
chr5 (127-252)||(18520863-18520988)
chr5 (131-252)||(14831814-14831935)
chr5 (131-252)||(33149617-33149738)
chr5 (129-252)||(36732921-36733044)
chr5 (130-252)||(6679697-6679819)
chr5 (131-252)||(40145407-40145528)
chr5 (130-241)||(2740273-2740384)
chr5 (126-252)||(13811647-13811773)
chr5 (131-252)||(35785199-35785320)
chr5 (131-241)||(28177775-28177885)
chr5 (131-236)||(42414297-42414402)
chr5 (127-252)||(36875591-36875707)
chr5 (131-235)||(35943888-35943992)
chr5 (129-252)||(15409589-15409712)
chr5 (128-240)||(3921256-3921368)
chr5 (130-220)||(41470427-41470517)
chr5 (131-236)||(26720516-26720621)
chr5 (131-236)||(26990265-26990370)
chr5 (126-231)||(31008983-31009088)
chr5 (131-236)||(33825319-33825424)
chr5 (130-240)||(2252159-2252269)
chr5 (175-235)||(21370048-21370108)
chr5 (131-252)||(20073495-20073616)
chr5 (129-252)||(39688876-39688999)
chr5 (179-243)||(31132392-31132456)
chr5 (128-232)||(38296200-38296304)
chr5 (136-190)||(10356639-10356694)
chr5 (131-253)||(6259979-6260101)
chr5 (153-199)||(16327923-16327969)
chr5 (154-252)||(39557496-39557594)
[»] chr3 (39 HSPs)
chr3 (131-252)||(53982011-53982132)
chr3 (131-252)||(33644200-33644321)
chr3 (129-252)||(54868874-54868997)
chr3 (130-252)||(17470404-17470526)
chr3 (127-241)||(49607410-49607524)
chr3 (129-234)||(27714888-27714993)
chr3 (136-252)||(52629305-52629421)
chr3 (129-236)||(11095350-11095455)
chr3 (127-241)||(31456685-31456799)
chr3 (129-235)||(33118847-33118953)
chr3 (131-252)||(8076393-8076514)
chr3 (135-244)||(48587078-48587187)
chr3 (130-252)||(9562998-9563120)
chr3 (130-252)||(24699933-24700055)
chr3 (131-241)||(26141522-26141632)
chr3 (127-252)||(11347901-11348026)
chr3 (136-252)||(26754700-26754816)
chr3 (128-210)||(36707445-36707527)
chr3 (135-252)||(30801712-30801829)
chr3 (129-241)||(41189754-41189866)
chr3 (130-235)||(35536625-35536730)
chr3 (130-235)||(8956761-8956866)
chr3 (131-252)||(20764894-20765015)
chr3 (129-241)||(11907369-11907481)
chr3 (131-235)||(14623835-14623939)
chr3 (131-241)||(51419350-51419460)
chr3 (132-235)||(13898051-13898154)
chr3 (131-252)||(41080709-41080828)
chr3 (153-240)||(36331320-36331407)
chr3 (129-252)||(1758435-1758560)
chr3 (131-241)||(47531865-47531975)
chr3 (130-252)||(48375685-48375807)
chr3 (136-213)||(42823116-42823193)
chr3 (131-196)||(45058588-45058652)
chr3 (129-199)||(35965806-35965876)
chr3 (157-210)||(43745772-43745825)
chr3 (157-214)||(52629938-52629994)
chr3 (154-253)||(25407125-25407225)
chr3 (130-190)||(36331419-36331479)
[»] chr4 (36 HSPs)
chr4 (129-252)||(48183028-48183151)
chr4 (127-252)||(480426-480551)
chr4 (127-252)||(50052407-50052532)
chr4 (129-252)||(24995086-24995209)
chr4 (131-252)||(6034044-6034165)
chr4 (131-236)||(11511457-11511562)
chr4 (131-252)||(41236347-41236468)
chr4 (127-252)||(42044346-42044471)
chr4 (131-235)||(3481654-3481758)
chr4 (130-252)||(29234224-29234346)
chr4 (131-252)||(54473512-54473633)
chr4 (128-252)||(29239883-29240007)
chr4 (131-210)||(50526192-50526271)
chr4 (129-252)||(23608233-23608356)
chr4 (131-252)||(31910192-31910313)
chr4 (129-240)||(32766956-32767067)
chr4 (169-252)||(41823920-41824003)
chr4 (125-240)||(19670707-19670822)
chr4 (129-240)||(55475189-55475300)
chr4 (129-235)||(29977883-29977989)
chr4 (130-240)||(50813883-50813993)
chr4 (131-252)||(40574779-40574900)
chr4 (136-252)||(53352545-53352660)
chr4 (129-252)||(47104542-47104665)
chr4 (130-196)||(44536781-44536846)
chr4 (153-240)||(17983734-17983821)
chr4 (130-235)||(47986207-47986312)
chr4 (129-196)||(29547994-29548061)
chr4 (130-232)||(28480267-28480369)
chr4 (130-232)||(28481142-28481244)
chr4 (130-232)||(28482017-28482119)
chr4 (131-196)||(55079749-55079814)
chr4 (163-235)||(18769141-18769213)
chr4 (161-252)||(48647705-48647796)
chr4 (131-196)||(8343198-8343263)
chr4 (171-252)||(56300144-56300225)
[»] chr2 (34 HSPs)
chr2 (129-252)||(9058478-9058601)
chr2 (130-252)||(7465714-7465836)
chr2 (134-252)||(28863458-28863576)
chr2 (127-252)||(33436079-33436204)
chr2 (130-236)||(5574483-5574589)
chr2 (134-252)||(19930799-19930917)
chr2 (131-252)||(13438343-13438464)
chr2 (131-252)||(17473020-17473141)
chr2 (131-252)||(40701478-40701599)
chr2 (129-241)||(10249372-10249484)
chr2 (129-252)||(30915461-30915584)
chr2 (130-252)||(32505627-32505749)
chr2 (131-252)||(28381634-28381755)
chr2 (127-252)||(20700811-20700936)
chr2 (131-235)||(27864704-27864808)
chr2 (127-241)||(38273132-38273246)
chr2 (131-241)||(40613892-40614002)
chr2 (131-252)||(17819983-17820104)
chr2 (128-213)||(38882832-38882916)
chr2 (127-241)||(42257189-42257303)
chr2 (131-252)||(4060685-4060806)
chr2 (128-235)||(26891500-26891607)
chr2 (130-252)||(2533123-2533244)
chr2 (130-235)||(33436210-33436315)
chr2 (132-235)||(41575138-41575242)
chr2 (137-252)||(3439985-3440100)
chr2 (130-241)||(36168835-36168946)
chr2 (153-240)||(2997478-2997565)
chr2 (131-240)||(38732354-38732463)
chr2 (131-196)||(43490121-43490186)
chr2 (127-240)||(45097726-45097839)
chr2 (174-231)||(3737986-3738043)
chr2 (129-200)||(17823782-17823853)
chr2 (127-196)||(13365347-13365418)
[»] scaffold0321 (1 HSPs)
scaffold0321 (127-252)||(10088-10213)
[»] scaffold1268 (1 HSPs)
scaffold1268 (131-252)||(908-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (131-252)||(908-1029)
[»] scaffold0237 (1 HSPs)
scaffold0237 (131-236)||(4029-4134)
[»] scaffold0110 (1 HSPs)
scaffold0110 (131-235)||(8859-8963)
[»] scaffold0018 (1 HSPs)
scaffold0018 (156-240)||(152523-152607)
[»] scaffold0316 (1 HSPs)
scaffold0316 (154-235)||(17077-17158)


Alignment Details
Target: chr7 (Bit Score: 130; Significance: 2e-67; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 48651613 - 48651484
Alignment:
Q  1 taatgaaatgtctttgaaagaaaacaattataataatgcaaacgaaatgtaacatacgaacaatttggaaagaagaaaacttaaatggcttgactaggaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48651613 taatgaaatgtctttgaaagaaaacaattataataatgcaaacgaaatgtaacatacgaacaatttggaaagaagaaaacttaaatggcttgactaggaa 48651514  T
Q  101 atgaatcaaacttgcataattttgtgaaaa 130  Q
    ||||||||||||||||||||||||||||||    
T  48651513 atgaatcaaacttgcataattttgtgaaaa 48651484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 35137533 - 35137654
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||| ||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttc 35137632  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  35137633 tcttttctctcctcttctctct 35137654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 129 - 241
Target Start/End: Original strand, 7389387 - 7389499
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| ||    
T  7389387 aagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 7389486  T
Q  229 tctcttttttctc 241  Q
    |||||||| ||||    
T  7389487 tctcttttctctc 7389499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 8080485 - 8080362
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||| |||||| |||| ||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 8080386  T
Q  229 tctcttttttctcttcatctctct 252  Q
    |||||||| |||| || |||||||    
T  8080385 tctcttttctctcctcttctctct 8080362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 4999614 - 4999493
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  |||| |||||||||||| |||||||||||||||||||| ||| |||||||||||||||||| ||||||||||| ||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  4999514 tcttttatctcctcttctctct 4999493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 38267040 - 38267161
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  ||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| ||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38267139  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  38267140 tcttttctctcctcttctctct 38267161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 127 - 252
Target Start/End: Original strand, 38837213 - 38837338
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||  ||||| |||||||||| |||||||||||||||||||||| |||||| ||||     
T  38837213 aaaagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 38837312  T
Q  227 tttctcttttttctcttcatctctct 252  Q
    |||||||||| |||| || |||||||    
T  38837313 tttctcttttctctcctcttctctct 38837338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 40957704 - 40957828
Alignment:
Q  128 aaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatt 227  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||| || | |||| |||| |    
T  40957704 aaagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacact 40957803  T
Q  228 ttctcttttttctcttcatctctct 252  Q
    ||||||||| |||| || |||||||    
T  40957804 ttctcttttctctcatcttctctct 40957828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 244
Target Start/End: Original strand, 3434561 - 3434675
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| || |||||| |||| |||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacacttt 3434660  T
Q  230 ctcttttttctcttc 244  Q
    ||||||| |||||||    
T  3434661 ctcttttctctcttc 3434675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 36362014 - 36361908
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    |||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||  ||||| |||| |||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36361915  T
Q  230 ctctttt 236  Q
    |||||||    
T  36361914 ctctttt 36361908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 19329842 - 19329963
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||||||||||||||||||   ||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||| |||||| |||| ||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 19329941  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  19329942 tcttttctctcctcttctctct 19329963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 134 - 252
Target Start/End: Original strand, 3783998 - 3784116
Alignment:
Q  134 taatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctct 233  Q
    |||||||||||||||||  ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| || |||||| |||| |||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 3784097  T
Q  234 tttttctcttcatctctct 252  Q
    ||| |||| || |||||||    
T  3784098 tttctctcctcttctctct 3784116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 36362025 - 36362131
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    |||||||||||||||||||||  |||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||  ||||| |||| |||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36362124  T
Q  230 ctctttt 236  Q
    |||||||    
T  36362125 ctctttt 36362131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 32951592 - 32951472
Alignment:
Q  132 agtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttct 231  Q
    |||||||||||||||||||| |||| || ||||||| ||||| ||| |||||||||||| | |||||||||||||||||||| |||||| |||| |||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttct 32951493  T
Q  232 cttttttctcttcatctctct 252  Q
    ||||| |||| || |||||||    
T  32951492 cttttctctcctcttctctct 32951472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 129 - 236
Target Start/End: Complemental strand, 19436289 - 19436182
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    |||||||||||||||||||||   ||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||| || ||| || |||| ||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactt 19436190  T
Q  229 tctctttt 236  Q
    ||||||||    
T  19436189 tctctttt 19436182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 21234401 - 21234504
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| ||||||||||||||   ||||||| |||||||||||||||||| |||||||||||||||||||||| ||| || |||| |||||| |||||||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttc 21234500  T
Q  231 tctt 234  Q
    ||||    
T  21234501 tctt 21234504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 36208171 - 36208294
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    |||||| |||||||||||||||  |||||||| ||||||  | ||||||||||||||||||  ||||| || |||||||||||||||||||| |||||||    
T  36208171 aagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattt 36208270  T
Q  229 tctcttttttctcttcatctctct 252  Q
    |||||||  |||| || |||||||    
T  36208271 tctctttcctctcctcttctctct 36208294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 252
Target Start/End: Original strand, 3694370 - 3694488
Alignment:
Q  134 taatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctct 233  Q
    |||||||| ||| ||||  ||||||| ||||||||| ||| |||||||||||||||| ||||||||||||| ||||| || |||||| |||| |||||||    
T  3694370 taatgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctct 3694469  T
Q  234 tttttctcttcatctctct 252  Q
    ||| |||| || |||||||    
T  3694470 tttctctcctcttctctct 3694488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 250
Target Start/End: Complemental strand, 46033902 - 46033782
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||| |||||||||||| | | ||||||||||||||||||||| ||||||||| |||||| |||||||| ||||| || || | |||||| || |||||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatatttt 46033803  T
Q  230 ctcttttttctcttcatctct 250  Q
    ||||||| |||| || |||||    
T  46033802 ctcttttctctcctcttctct 46033782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 8238236 - 8238322
Alignment:
Q  154 taggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttttttct 240  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||  ||||||| ||||||  ||| ||||||||| ||||    
T  8238236 taggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacactttctctttcttct 8238322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 35522881 - 35522997
Alignment:
Q  136 atgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttt 235  Q
    ||||||||||||||   ||| ||||||||||||| ||| |||||||||||||||| |||||||| | ||  |||| || |||||| |||| |||||||||    
T  35522881 atgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctcttt 35522980  T
Q  236 tttctcttcatctctct 252  Q
    | ||||||| |||||||    
T  35522981 tctctcttcttctctct 35522997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 240
Target Start/End: Original strand, 38044195 - 38044306
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    |||||| |||||||||| ||||  |||||||||||||||||| |||||| |||||||||||| ||||| |||| ||  ||||||| ||||||  ||| ||    
T  38044195 aagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactt 38044294  T
Q  229 tctcttttttct 240  Q
    ||||||| ||||    
T  38044295 tctctttcttct 38044306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 226
Target Start/End: Complemental strand, 46374902 - 46374807
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||| ||||||||||||||   ||||||||||| ||||||||| |||||||||||||||| |||||||| | ||| ||||||| |||||| |||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacat 46374807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 32564526 - 32564417
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| |||||||||| ||| | |||||||||||||||||| ||||||||||||||||||| ||||| || |  |  ||||||| ||||||| ||| ||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacactttc 32564427  T
Q  231 tcttttttct 240  Q
    ||||| ||||    
T  32564426 tctttcttct 32564417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 35468959 - 35468851
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||||||||||||||||||||||   |||| |||||||||| | ||||||||||||| |||||| | | | ||   || ||||||||||||||||||||     
T  35468959 aaaagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacac 35468860  T
Q  227 tttctcttt 235  Q
    |||||||||    
T  35468859 tttctcttt 35468851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 22343360 - 22343426
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgaca 196  Q
    ||||| |||||||||| ||||  |||||||||||||||||| ||||||||||||||||||| |||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 22343426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 41915740 - 41915850
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||| |||||||||| ||||  |||||||||||||||||| |||||||| |||||||||| ||||| || | ||  ||||||| ||||||  ||| |||    
T  41915740 agagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 41915839  T
Q  230 ctcttttttct 240  Q
    |||||| ||||    
T  41915840 ctctttcttct 41915850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 10343666 - 10343597
Alignment:
Q  128 aaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacac 197  Q
    |||||||||||||||||||||||  |||||||| |||||||   ||||||||||||||||||| ||||||    
T  10343666 aaagagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 11044185 - 11044299
Alignment:
Q  128 aaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatt 227  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||||||||           |||||||||||||||||||||| ||||||  ||| |    
T  11044185 aaagagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc----------ctgacacgtagtcacgtggaccccgcacaagtacact 11044274  T
Q  228 ttctcttttttctcttcatctctct 252  Q
    ||||||||  |||| || |||||||    
T  11044275 ttctctttcctctcatcttctctct 11044299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 252
Target Start/End: Original strand, 18207176 - 18207300
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||||||| ||||||||||||||   |||||||||||||||||  |||||||||| |||||||| | |||||| | |||||| ||||  ||||| ||||     
T  18207176 aaaagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgt-ggcacgtgaaccccacacaagcacac 18207274  T
Q  227 tttctcttttttctcttcatctctct 252  Q
    |||||||||  |||| || |||||||    
T  18207275 tttctctttcatctcctcttctctct 18207300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 40846213 - 40846104
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| |||||||||| |||   |||||||||||||||||| |||||| |||||||||||| | ||| ||||| |  ||||||| ||||||| ||| ||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacactttc 40846114  T
Q  231 tcttttttct 240  Q
    ||||| ||||    
T  40846113 tctttcttct 40846104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 26296643 - 26296765
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||| ||||||||||||||   ||||||| ||||| ||||||| ||| ||||| |||||| ||| |||| | ||  ||||||| |||||| | ||||||    
T  26296643 agagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcatttt 26296742  T
Q  230 ctcttttttctcttcatctctct 252  Q
    ||||||| |||| || |||||||    
T  26296743 ctcttttctctcctcttctctct 26296765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 39256023 - 39255903
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| ||||||||||||||   |||||||||||||||||  |||| ||||| |||||||| |||||||| | ||||||||| |  |||||  ||| ||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgt-ggcacgtggactccacacaagaacactttc 39255925  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||  |||| || |||||||    
T  39255924 tctttcatctcctcttctctct 39255903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 31735884 - 31735940
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaa 187  Q
    |||| ||||||||||||||   |||||||||||||||| |||| |||||||||||||    
T  31735884 gagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaaa 31735940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 2318320 - 2318261
Alignment:
Q  154 taggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccc 213  Q
    |||||||||| |||||  ||||||||||||||||||| ||||  || |||||||||||||    
T  2318320 taggtggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtggaccc 2318261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 16374894 - 16374845
Alignment:
Q  161 caatacaccctttgacacccacacaaaaatttgacacgtagtcacgtgga 210  Q
    ||||||| || |||||| |||||||||||| |||||||| ||||||||||    
T  16374894 caatacatcccttgacatccacacaaaaatctgacacgtggtcacgtgga 16374845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 41423682 - 41423803
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| ||||||||||||||   |||| ||| ||||||||  |||||||  |||||||||| ||||| || ||||||| || || | |||| || ||||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttc 41423781  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||  |||| || |||||||    
T  41423782 tctttcatctcctcttctctct 41423803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 27744375 - 27744307
Alignment:
Q  165 acaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctct 233  Q
    ||||||||||| |||||||||||||| ||||| || | |||||||| ||  || || ||||||||||||    
T  27744375 acaccctttgatacccacacaaaaatctgacatgtggccacgtggatccctcataagcacattttctct 27744307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 1e-43; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 9474976 - 9474855
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttc 9474877  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  9474876 tcttttctctcctcttctctct 9474855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 127 - 241
Target Start/End: Complemental strand, 8346492 - 8346378
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||     
T  8346492 aaaagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacac 8346393  T
Q  227 tttctcttttttctc 241  Q
    |||||||||| ||||    
T  8346392 tttctcttttctctc 8346378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 127 - 252
Target Start/End: Original strand, 38595150 - 38595275
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||| ||||     
T  38595150 aaaagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacac 38595249  T
Q  227 tttctcttttttctcttcatctctct 252  Q
    |||||||||| |||| || |||||||    
T  38595250 tttctcttttctctcatcttctctct 38595275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 2581912 - 2582036
Alignment:
Q  128 aaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatt 227  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| |    
T  2581912 aaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 2582011  T
Q  228 ttctcttttttctcttcatctctct 252  Q
    |||| |||| |||| || |||||||    
T  2582012 ttcttttttctctcctcttctctct 2582036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 134 - 252
Target Start/End: Complemental strand, 44548473 - 44548355
Alignment:
Q  134 taatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctct 233  Q
    ||||||||||||||||  |||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||| |||||| |||| |||||||    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 44548374  T
Q  234 tttttctcttcatctctct 252  Q
    ||| ||||||| |||||||    
T  44548373 tttctctcttcttctctct 44548355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 3000319 - 3000440
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||| |||| ||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  3000419 tcttttctctcatcttctctct 3000440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 41758804 - 41758926
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    |||||||||||||||||||||  |||  |||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| ||||||||||| |||    
T  41758804 agagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacacttt 41758903  T
Q  230 ctcttttttctcttcatctctct 252  Q
    ||||||| |||| || |||||||    
T  41758904 ctcttttctctcctcttctctct 41758926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 51898784 - 51898662
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||| |||| |||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 51898685  T
Q  230 ctcttttttctcttcatctctct 252  Q
    || |||  |||| || |||||||    
T  51898684 ctatttcctctcctcttctctct 51898662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 27564835 - 27564714
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||||||||||||||||||   ||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||| |||||| |||| ||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 27564736  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  27564735 tcttttctctcctcttctctct 27564714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 47452420 - 47452299
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| || |||||| |||| ||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttc 47452321  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  47452320 tcttttctctcctcttctctct 47452299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 38632423 - 38632300
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||| ||| |||||||||||| |||||||||||||||||||||| |||||| |||| ||    
T  38632423 aagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 38632324  T
Q  229 tctcttttttctcttcatctctct 252  Q
    | |||||| |||| || |||||||    
T  38632323 tttcttttctctcctcttctctct 38632300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 50630457 - 50630579
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    |||||||||||||||||| ||  ||||||||||||||| ||||||  |||||||||||||| |||||||||||||||||||||| |||||| |||| |||    
T  50630457 agagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 50630556  T
Q  230 ctcttttttctcttcatctctct 252  Q
    ||||||| |||| || |||||||    
T  50630557 ctcttttctctcctcttctctct 50630579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 43132 - 43253
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||| | ||||| | ||||||| |||||||||||||||||||||| |||||||||||||||||||| | |||||| |||| ||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  43232 tcttttctctcctcctctctct 43253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 48716382 - 48716277
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||| |||| |||     
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttta 48716283  T
Q  231 tctttt 236  Q
    ||||||    
T  48716282 tctttt 48716277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 32813244 - 32813368
Alignment:
Q  128 aaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatt 227  Q
    ||||||| ||||||||||||||   ||||||||||||||||||||| |||||||||||||||| |||||||| ||||| ||||||| |||||| |||| |    
T  32813244 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacact 32813343  T
Q  228 ttctcttttttctcttcatctctct 252  Q
    ||||||||| |||| || |||||||    
T  32813344 ttctcttttctctcctcttctctct 32813368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 37649198 - 37649319
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||| |  | |||||| |||| ||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttc 37649297  T
Q  231 tcttttttctcttcatctctct 252  Q
     ||||| |||| || |||||||    
T  37649298 ccttttctctcctcttctctct 37649319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 241
Target Start/End: Complemental strand, 23597194 - 23597081
Alignment:
Q  128 aaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatt 227  Q
    ||||||||||||||||||||||   |||||||||||||||| |||||| ||||||| |||||| |||||||| | ||||| |||| |||||||||||| |    
T  23597194 aaagagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacacact 23597095  T
Q  228 ttctcttttttctc 241  Q
    || |||||| ||||    
T  23597094 ttatcttttctctc 23597081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 13414791 - 13414866
Alignment:
Q  161 caatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctctttt 236  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||  ||||| |||||||||||||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctctttt 13414866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 45044638 - 45044555
Alignment:
Q  153 ttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctctttt 236  Q
    ||||||||||||||||| ||||||||||| |||||||| ||||| |||| ||| ||||||| ||||||||||||||||||||||    
T  45044638 ttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattttctctttt 45044555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 26274430 - 26274545
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    |||| |||||||||||||||||  ||| ||||||||||| | ||||||| ||||| |||||| |||||| |||||||||||| |||||||||  ||| ||    
T  26274430 aagaataatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacactt 26274529  T
Q  229 tctcttttttctcttc 244  Q
    | |||||| |||||||    
T  26274530 tttcttttctctcttc 26274545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 11152476 - 11152389
Alignment:
Q  132 agtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaa 220  Q
    |||||||| |||||||||| || |||||||||||||||||| |||| |||||||||||| ||||||||||||| || ||||| ||||||    
T  11152476 agtaatgaaacatagacacctt-aggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaa 11152389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 5959104 - 5958991
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||||||| |||||||||| ||||  ||| |||||||||||||  ||||||||||||||||||| ||||| || ||||  ||||||| ||||||  |||     
T  5959104 aaaagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacac 5959005  T
Q  227 tttctcttttttct 240  Q
    ||||||||| ||||    
T  5959004 tttctctttcttct 5958991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 50591100 - 50590991
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| |||||||||| ||||  |||||||||||||||||| ||||||||||||||||||| ||||| || | ||  ||||||| ||||||  ||| ||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 50591001  T
Q  231 tcttttttct 240  Q
    ||||| ||||    
T  50591000 tctttcttct 50590991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 49811629 - 49811506
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    |||||| |||||| |||||||   ||||||| ||||||||| ||||||| |||||||||||| |||||||||| ||  | ||| | |||||| |||| ||    
T  49811629 aagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactt 49811530  T
Q  229 tctcttttttctcttcatctctct 252  Q
    |||||||| |||| || |||||||    
T  49811529 tctcttttctctcctcttctctct 49811506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 244
Target Start/End: Original strand, 26440764 - 26440847
Alignment:
Q  161 caatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttttttctcttc 244  Q
    ||||||||||||| |||||||||||||||| |||||||| | ||| |||| || ||| || |||| |||||||||| |||||||    
T  26440764 caatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactttctcttttctctcttc 26440847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 44334245 - 44334176
Alignment:
Q  156 ggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacaca 225  Q
    ||||| ||||||| | |||||| |||||||||||  |||||||||||||| ||||||| |||||||||||    
T  44334245 ggtggtaatacacacattgacatccacacaaaaacctgacacgtagtcacatggacccagcacaaacaca 44334176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 44453984 - 44454100
Alignment:
Q  136 atgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttt 235  Q
    ||||||||||||||| |||| ||||||||||| |  |||| |||||||||||||| ||||| || || ||||||| ||  ||||| |||| ||| |||||    
T  44453984 atgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacactttttcttt 44454083  T
Q  236 tttctcttcatctctct 252  Q
      |||| || |||||||    
T  44454084 cctctcatcttctctct 44454100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 252
Target Start/End: Original strand, 6260892 - 6260991
Alignment:
Q  153 ttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttttttctcttcatctctct 252  Q
    |||||||| ||||||||| |  ||||||||| |||||| | ||| || ||||||||||||| ||| || |||||||||| ||| ||||| || |||||||    
T  6260892 ttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgcataagcacattttctatttcttctcctcttctctct 6260991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 37926539 - 37926433
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||| |||||||||||| |  |||||||||||||||| | ||| ||||||||| |||||| |||||||| | ||| |||| || | ||||  ||| |||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacacttt 37926440  T
Q  230 ctctttt 236  Q
    |||||||    
T  37926439 ctctttt 37926433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 48489328 - 48489405
Alignment:
Q  158 tggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctctttt 236  Q
    ||||||||||||||  |||| |||||||||||| ||||| || |||||||||| || |||||| |||||||||| ||||    
T  48489328 tggcaatacaccctg-gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttctatttt 48489405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 41608593 - 41608528
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgaca 196  Q
    |||| |||||||||| |||   |||||||||||||||||| ||||||| ||||||||||| |||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgaca 41608528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 750239 - 750294
Alignment:
Q  157 gtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccc 213  Q
    ||||||||||||||||| |||||||||||||| | |||||||| || || |||||||    
T  750239 gtggcaatacacccttt-acacccacacaaaattctgacacgtggtaacatggaccc 750294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 8e-42; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 15197333 - 15197443
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| ||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 15197432  T
Q  231 tcttttttctc 241  Q
    |||||| ||||    
T  15197433 tcttttctctc 15197443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 12831047 - 12831168
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| ||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  12831147 tcttttctctcctcttctctct 12831168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 34012396 - 34012275
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||| ||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 34012297  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  34012296 tcttttctctcctcttctctct 34012275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 14547920 - 14548043
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    |||||||| |||||||||||||  ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||| |||| ||    
T  14547920 aagagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 14548019  T
Q  229 tctcttttttctcttcatctctct 252  Q
    |||||||| |||| || |||||||    
T  14548020 tctcttttctctcctcttctctct 14548043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 504221 - 504100
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||| ||||  |||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattc 504122  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  504121 tcttttctctcatcttctctct 504100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 127 - 252
Target Start/End: Original strand, 5957826 - 5957951
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||| ||||     
T  5957826 aaaaaagtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacac 5957925  T
Q  227 tttctcttttttctcttcatctctct 252  Q
    |||||||||  |||| || |||||||    
T  5957926 tttctctttcctctcctcttctctct 5957951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 37038478 - 37038600
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||| |||| |||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 37038577  T
Q  230 ctcttttttctcttcatctctct 252  Q
    || |||  |||| || |||||||    
T  37038578 ctatttcctctcctcttctctct 37038600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 40424043 - 40423922
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||| |||| ||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 40423944  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  40423943 tcttttctctcctcttctctct 40423922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 10284734 - 10284627
Alignment:
Q  128 aaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatt 227  Q
    ||||||| |||||||||||||||  ||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |    
T  10284734 aaagagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacact 10284635  T
Q  228 ttctcttt 235  Q
    ||||||||    
T  10284634 ttctcttt 10284627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 23122697 - 23122587
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  ||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||| || |||| ||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 23122598  T
Q  231 tcttttttctc 241  Q
    |||||| ||||    
T  23122597 tcttttctctc 23122587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 1180040 - 1179919
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||  | |||||| |||| ||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  1179940 tcttttctctcctcttctctct 1179919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 44507188 - 44507066
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    |||||||||||||||||||||  |||||||| ||||||| |||| |||||||||||||||| |||||||||||||||||||||| | |||| || | |||    
T  44507188 agagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatacttt 44507089  T
Q  230 ctcttttttctcttcatctctct 252  Q
    ||||||| |||| || |||||||    
T  44507088 ctcttttctctcatcttctctct 44507066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 8841510 - 8841428
Alignment:
Q  153 ttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttt 235  Q
    |||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||| |||||| |||| |||||||||    
T  8841510 ttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctcttt 8841428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 15048281 - 15048176
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| ||||||||||||||   ||||||||||||||||||||||||||| |||||||||| |||||||||| ||| ||||||| |||||| |||| ||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcacactttc 15048183  T
Q  231 tcttttt 237  Q
    |||||||    
T  15048182 tcttttt 15048176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 136 - 252
Target Start/End: Complemental strand, 10621182 - 10621066
Alignment:
Q  136 atgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttt 235  Q
    ||||||||||||||   |||||||| ||||||||||||||||||||||||||||| |||||||||| ||| | || || |||||| |||| |||||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctcttt 10621083  T
Q  236 tttctcttcatctctct 252  Q
    | |||| || |||||||    
T  10621082 tctctcctcttctctct 10621066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 4854965 - 4854842
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    |||||||||||||||||||||   ||||||||||||||||||||| ||||| ||| |||||| ||| | || | ||| |||||||||||||| |||| ||    
T  4854965 aagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactt 4854866  T
Q  229 tctcttttttctcttcatctctct 252  Q
    |||||||| |||| || |||||||    
T  4854865 tctcttttctctcctcttctctct 4854842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 15259031 - 15258908
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    |||||| |||||||||||| ||| |||| |||||||||| || | |||| ||||| |||||| ||||| || |||||||||||||||||||| |||||||    
T  15259031 aagagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattt 15258932  T
Q  229 tctcttttttctcttcatctctct 252  Q
    |||||||  |||| || |||||||    
T  15258931 tctctttcctctcctcttctctct 15258908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 43414681 - 43414560
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| ||||||||||||||   |||| |||||| |||||||||||||||||||||||||| | |||||| ||||| |||| || |||||| |||| ||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttc 43414582  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  43414581 tcttttctctcctcttctctct 43414560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 16383373 - 16383486
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||||||| |||||||||| ||||  |||||||||||||||||| ||||||||||||||||||| ||||| || | ||  ||||||| ||||||  |||     
T  16383373 aaaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 16383472  T
Q  227 tttctcttttttct 240  Q
    ||||||||| ||||    
T  16383473 tttctctttcttct 16383486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 20075034 - 20074966
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgt 199  Q
    |||||||||||||||||||   |||||||||||||||| |||||||||||||| |||||| ||||||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacgt 20074966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 34307214 - 34307281
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgaca 196  Q
    |||||| |||||||||| ||||  |||||||||||||||||| ||||||||||||||||||| |||||    
T  34307214 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 34307281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 9122229 - 9122306
Alignment:
Q  175 acacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttttttctcttcatctctct 252  Q
    |||||||||||||||| ||||| ||||||||||||| || |||||| |||| |||||||||| |||| || |||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctct 9122306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 235
Target Start/End: Original strand, 38229429 - 38229532
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| |||||||||  ||||| |||||||||||||| | | | ||||||||||||||||| ||||| || ||||||||||  ||| |||| |||||||||    
T  38229429 gagttatgatacatgaacactcttaggtggcaatacgctcct-gacacccacacaaaaatctgacatgtggtcacgtggattctgtacaagcacattttc 38229527  T
Q  231 tcttt 235  Q
    |||||    
T  38229528 tcttt 38229532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 24307625 - 24307688
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaat 190  Q
    |||||||| |||||||||| ||||  ||||||||||||||| || |||||||||||||||||||    
T  24307625 aaaagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaat 24307688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 240
Target Start/End: Complemental strand, 24307895 - 24307784
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    |||||| |||||||||| ||||  ||||||||||||||| || ||||||||||||||||||| ||| | || | ||  ||||||| ||||||  ||| ||    
T  24307895 aagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactt 24307796  T
Q  229 tctcttttttct 240  Q
    ||||||| ||||    
T  24307795 tctctttcttct 24307784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 14055692 - 14055610
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccc 213  Q
    |||| ||||||||| |||||  ||||||| |||||||| | |||||| |||||||||||| | ||| ||||||||||||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtggaccc 14055610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 17443824 - 17443929
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||| ||||||||||||||   ||||||| ||||||||   || |||| ||||||||||| ||||| ||||||| ||||||||  |||||| ||| |||    
T  17443824 agagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacacttt 17443923  T
Q  230 ctcttt 235  Q
    ||||||    
T  17443924 ctcttt 17443929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 30479574 - 30479509
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgaca 196  Q
    |||| |||||||||| ||||  ||||||||||||||||||||||||| ||||| |||||| |||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgaca 30479509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 42221513 - 42221636
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    ||||||||||||||||| |||   ||||||| |||||||  | | ||||||||||||||||| ||||||||| |||  |||||||   |||| |||| ||    
T  42221513 aagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactt 42221612  T
Q  229 tctcttttttctcttcatctctct 252  Q
    |||||||  |||| || |||||||    
T  42221613 tctctttcatctcatcttctctct 42221636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 16056505 - 16056392
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||||||| |||||||||| |||   ||| ||| ||||||| || ||||||||||||||||||| ||||| || | ||  ||||||| ||||||  |||     
T  16056505 aaaagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 16056406  T
Q  227 tttctcttttttct 240  Q
    ||||||||| ||||    
T  16056405 tttctctttcttct 16056392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 32032724 - 32032828
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||| |||||||||| ||||  ||||||||||||||| || |||||| |||||||||||| ||||| || | ||  |||| |||||||||  ||| |||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacatcc-ttgacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacacttt 32032822  T
Q  230 ctcttt 235  Q
    ||||||    
T  32032823 ctcttt 32032828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 170
Target Start/End: Original strand, 9122196 - 9122234
Alignment:
Q  132 agtaatgatacatagacacttttaggtggcaatacaccc 170  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  9122196 agtaatgatacatagacacccttaggtggcaatacaccc 9122234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 42197369 - 42197410
Alignment:
Q  157 gtggcaatacaccctttgacacccacacaaaaatttgacacgt 199  Q
    ||||||||||||||||| |||||||||||||| ||||||||||    
T  42197369 gtggcaatacacccttt-acacccacacaaaattttgacacgt 42197410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 29705528 - 29705465
Alignment:
Q  157 gtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaa 221  Q
    ||||||||||||||||| |||||||||||||| | |||||||| |  || ||||||| |||||||    
T  29705528 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacttggaccccgcacaaa 29705465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 8e-42; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 127 - 241
Target Start/End: Original strand, 15832573 - 15832687
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||||||||||||||||||||||| |||||||| ||||| | | |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  15832573 aaaagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacat 15832672  T
Q  227 tttctcttttttctc 241  Q
    |||||||||||||||    
T  15832673 tttctcttttttctc 15832687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 32869678 - 32869799
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| ||||    
T  32869678 gagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 32869777  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  32869778 tcttttctctcctcttctctct 32869799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 134 - 252
Target Start/End: Complemental strand, 22880755 - 22880637
Alignment:
Q  134 taatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctct 233  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||| |||| |||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctct 22880656  T
Q  234 tttttctcttcatctctct 252  Q
    ||| |||| || |||||||    
T  22880655 tttctctcctcttctctct 22880637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 11427615 - 11427739
Alignment:
Q  130 agagtaatgatacatagacac--ttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatt 227  Q
    |||||||||||||||||||||  | ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| || |||||| |||| |    
T  11427615 agagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 11427714  T
Q  228 ttctcttttttctcttcatctctct 252  Q
    ||||||||| |||| || |||||||    
T  11427715 ttctcttttctctcctcttctctct 11427739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 17598554 - 17598675
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  ||||||||||||||| | |||||||||||||||||||| |||||||| ||||||||||||| |||||| |||| ||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttc 17598653  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  17598654 tcttttctctcctcttctctct 17598675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 6209568 - 6209444
Alignment:
Q  128 aaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatt 227  Q
    |||||||||||||||||||||||  ||||||||||||||||  |||||||| ||||||||||| || ||||||||||||||||||| |||| | |||| |    
T  6209568 aaagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacact 6209469  T
Q  228 ttctcttttttctcttcatctctct 252  Q
    ||||||||| |||| || |||||||    
T  6209468 ttctcttttctctcctcttctctct 6209444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 29857827 - 29857932
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||||||||||||||||||| ||||| |||||||||||| ||| |||||||||||||||| ||||||||||| ||||||| || ||| || |||| ||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  231 tctttt 236  Q
    ||||||    
T  29857927 tctttt 29857932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 127 - 241
Target Start/End: Complemental strand, 23128231 - 23128117
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||||| |||||||| |||||||| |||| |||  |||||| |||||||||||||||||||||| ||||||||||||||||||| ||  ||||| ||||     
T  23128231 aaaagaataatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacac 23128132  T
Q  227 tttctcttttttctc 241  Q
    |||||||||| ||||    
T  23128131 tttctcttttctctc 23128117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 31109500 - 31109390
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||  ||||||||  ||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||| ||| ||  ||| ||||    
T  31109500 gagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacactttc 31109401  T
Q  231 tcttttttctc 241  Q
    |||||| ||||    
T  31109400 tcttttctctc 31109390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 31976247 - 31976369
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||| ||||||||||||||   ||||||||||||| ||||||| |||||||||||||||| |||||||| ||||| || |||| |||||| |||| |||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacacttt 31976346  T
Q  230 ctcttttttctcttcatctctct 252  Q
    ||||||| |||| || |||||||    
T  31976347 ctcttttctctcctcttctctct 31976369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 31110863 - 31110756
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||||||| ||||||||||||||   |||||||||||||||||||||||||  | ||||||||| |||||||||  ||| |||||||||||||| ||||     
T  31110863 aaaagagttatgatacatagacatccttaggtggcaatacaccctttgaca--ctcacaaaaatctgacacgtaaccacatggaccctgcacaagcacac 31110766  T
Q  227 tttctctttt 236  Q
    ||||||||||    
T  31110765 tttctctttt 31110756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 240
Target Start/End: Complemental strand, 30341463 - 30341351
Alignment:
Q  128 aaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatt 227  Q
    ||||||| |||||||||| ||||  |||||||||||||||||| ||||||||||||||||||| ||||| || | ||  ||||||| ||||||  ||| |    
T  30341463 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 30341364  T
Q  228 ttctcttttttct 240  Q
    |||||||| ||||    
T  30341363 ttctctttcttct 30341351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 240
Target Start/End: Complemental strand, 15990144 - 15990033
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    |||||| |||||||||| ||||  |||||||||||||||||| ||||||||||||||||||| ||||| || | ||  ||||||| ||||||  ||| ||    
T  15990144 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 15990045  T
Q  229 tctcttttttct 240  Q
    ||||||| ||||    
T  15990044 tctctttcttct 15990033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 15508124 - 15508015
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| |||||||||| ||||  |||||||||||||||||| ||||||||||||||||||| ||||| || | ||  ||||||| ||||||  ||| ||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15508025  T
Q  231 tcttttttct 240  Q
    ||||| ||||    
T  15508024 tctttcttct 15508015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 235
Target Start/End: Complemental strand, 31953130 - 31953026
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||| |||||||   |||||||||||||||||| |||||||||||| |||||| ||||| ||  ||| |||||||   |||||||||| ||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttc 31953031  T
Q  231 tcttt 235  Q
    |||||    
T  31953030 tcttt 31953026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 28536582 - 28536483
Alignment:
Q  135 aatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctctt 234  Q
    ||||||||||| |||   ||||||||||||||| || ||||||||||||||||||| |||||||  |||| ||||||||  ||||| |||| ||||||||    
T  28536582 aatgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcacactttctctt 28536485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 252
Target Start/End: Original strand, 12732478 - 12732603
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    ||||||||||||||||||||||| | ||| ||||||||| |  | ||||||||||||||||||| |||||||| |  | ||||| ||  || || |||||    
T  12732478 aaaagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacat 12732577  T
Q  227 tttctcttttttctcttcatctctct 252  Q
    |||||||||  |||| || |||||||    
T  12732578 tttctctttcatctcctcttctctct 12732603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 4231570 - 4231657
Alignment:
Q  153 ttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttttttct 240  Q
    |||||||||||||||||| ||| ||||||||||||||| |||||||| | ||  ||||||| ||||||  ||| ||||||||| ||||    
T  4231570 ttaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttctctttcttct 4231657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 9379807 - 9379708
Alignment:
Q  136 atgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttt 235  Q
    ||||||||||||||   |||| || ||||||| || |||||||||| ||||||||||||||||| | || ||||| |   ||||||||||||||||||||    
T  9379807 atgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctcttt 9379708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 252
Target Start/End: Original strand, 946372 - 946497
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||| ||||| ||||||||||||   |||||||  |||||||||||||||||| || ||||||| |||||| |||||||||  | || || | | ||||     
T  946372 aaaaaagtaacgatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgtaaatcccgctctagcacac 946471  T
Q  227 tttctcttttttctcttcatctctct 252  Q
    |||||||||| |||| || |||||||    
T  946472 tttctcttttctctcctcttctctct 946497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 3e-41; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 127 - 252
Target Start/End: Complemental strand, 18520988 - 18520863
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||     
T  18520988 aaaagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 18520889  T
Q  227 tttctcttttttctcttcatctctct 252  Q
    |||||||||| |||| || |||||||    
T  18520888 tttctcttttatctcctcttctctct 18520863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 14831814 - 14831935
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| || |||||| |||| ||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 14831913  T
Q  231 tcttttttctcttcatctctct 252  Q
    | ||||||||| || |||||||    
T  14831914 ttttttttctcctcttctctct 14831935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 33149738 - 33149617
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||| ||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 33149639  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  33149638 tcttttctctcctcttctctct 33149617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 36733044 - 36732921
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    ||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||| |||| ||    
T  36733044 aagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactt 36732945  T
Q  229 tctcttttttctcttcatctctct 252  Q
    |||||||| |||| || |||||||    
T  36732944 tctcttttctctcctcttctctct 36732921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 6679697 - 6679819
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||| ||||||||||||||  |||||||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||| |||||||||||||||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacatttt 6679796  T
Q  230 ctcttttttctcttcatctctct 252  Q
    ||||||| |||| || |||||||    
T  6679797 ctcttttctctcctcttctctct 6679819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 40145407 - 40145528
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  ||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||| |||||| |||| ||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 40145506  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  40145507 tcttttctctcctcttctctct 40145528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 241
Target Start/End: Original strand, 2740273 - 2740384
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||| |||| |||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 2740372  T
Q  230 ctcttttttctc 241  Q
    ||||||| ||||    
T  2740373 ctcttttctctc 2740384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 126 - 252
Target Start/End: Original strand, 13811647 - 13811773
Alignment:
Q  126 gaaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacaca 225  Q
    ||||||||||| |||||||||||||  ||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||| |||||| ||||    
T  13811647 gaaaagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13811746  T
Q  226 ttttctcttttttctcttcatctctct 252  Q
     |||||||| | |||| || |||||||    
T  13811747 ctttctcttctctctcctcttctctct 13811773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 35785199 - 35785320
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||| || |||||| |||| ||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttc 35785298  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  35785299 tcttttctctcatcttctctct 35785320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 28177775 - 28177885
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||| ||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttc 28177874  T
Q  231 tcttttttctc 241  Q
    |||||| ||||    
T  28177875 tcttttctctc 28177885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 42414402 - 42414297
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||| |||| |||     
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttta 42414303  T
Q  231 tctttt 236  Q
    ||||||    
T  42414302 tctttt 42414297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 252
Target Start/End: Complemental strand, 36875707 - 36875591
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||         |||||||||||| || |||||| ||||     
T  36875707 aaaaaagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaa---------tagtcacgtggatcccgcacaagcacac 36875617  T
Q  227 tttctcttttttctcttcatctctct 252  Q
    ||||||||||||||| || |||||||    
T  36875616 tttctcttttttctcctcttctctct 36875591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 131 - 235
Target Start/End: Complemental strand, 35943992 - 35943888
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| |||||||||||||||  ||||||||||||||| | |||||||||||||||||||| ||||||||||| ||||||| ||  ||||| |||| ||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  231 tcttt 235  Q
    |||||    
T  35943892 tcttt 35943888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 15409712 - 15409589
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    |||||| ||||||||||||||   ||||||| |||||||  ||||||||||||||||||||| |||||||||| ||| ||||||| |||||| |||| |     
T  15409712 aagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactc 15409613  T
Q  229 tctcttttttctcttcatctctct 252  Q
    |||||||| |||| || |||||||    
T  15409612 tctcttttctctcctcttctctct 15409589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 240
Target Start/End: Complemental strand, 3921368 - 3921256
Alignment:
Q  128 aaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatt 227  Q
    ||||||| |||||||||| ||||  |||||||||||||||||| ||||||||||||||||||| ||||| || | ||  ||||||| ||||||  ||| |    
T  3921368 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 3921269  T
Q  228 ttctcttttttct 240  Q
    |||||||| ||||    
T  3921268 ttctctttcttct 3921256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 220
Target Start/End: Complemental strand, 41470517 - 41470427
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaa 220  Q
    |||||||| |||||||||||| |||||||||||||||| ||||| | |  || | |||||| |||||||||||||||||||||| ||||||    
T  41470517 agagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaa 41470427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 26720516 - 26720621
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| ||||||||||||||   ||||||||||||||||||||| ||||| ||| |||||| |||||||| | ||| |||| || |||||| |||| ||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26720615  T
Q  231 tctttt 236  Q
    ||||||    
T  26720616 tctttt 26720621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 26990265 - 26990370
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| ||||||||||||||   ||||||||||||||||||||| ||||| ||| |||||| |||||||| | ||| |||| || |||||| |||| ||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26990364  T
Q  231 tctttt 236  Q
    ||||||    
T  26990365 tctttt 26990370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 231
Target Start/End: Original strand, 31008983 - 31009088
Alignment:
Q  126 gaaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacaca 225  Q
    ||||||||| |||||||||| |||   ||||||| |||||||  |||  |||||||||||||||| ||||||||||||||||||| || |||||| ||||    
T  31008983 gaaaagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 31009082  T
Q  226 ttttct 231  Q
     |||||    
T  31009083 ctttct 31009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 33825424 - 33825319
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||||||||| |||||||| | |||||||||||||||| | |||||||||||| |||||| ||||||||  ||| ||| ||| | ||||| |||| ||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttc 33825325  T
Q  231 tctttt 236  Q
    ||||||    
T  33825324 tctttt 33825319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 2252269 - 2252159
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||| |||||||||| |||   |||||||||||||||||| ||||||||||||||||||| ||||| || | ||  ||||||| ||||||  ||| |||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 2252170  T
Q  230 ctcttttttct 240  Q
    |||||| ||||    
T  2252169 ctctttcttct 2252159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 21370048 - 21370108
Alignment:
Q  175 acacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttt 235  Q
    |||||||| ||||||| ||||| || ||||||||||||| |||||||||||||||||||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctcttt 21370108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 20073616 - 20073495
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||| |||||||   |||| || |||||||||||||||||| |||| |||||| |  |||||   |||||||||||||||||| |||| ||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttc 20073517  T
Q  231 tcttttttctcttcatctctct 252  Q
    | |||  |||| || |||||||    
T  20073516 tatttcctctcctcttctctct 20073495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 39688999 - 39688876
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    |||||| |||||||||| ||||  ||| ||||||||||| || ||||||||||||||||||| ||| | || ||||  || |||| ||| ||  ||| ||    
T  39688999 aagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactt 39688900  T
Q  229 tctcttttttctcttcatctctct 252  Q
    ||||||| |||| ||| |||||||    
T  39688899 tctctttcttcttttcttctctct 39688876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 31132392 - 31132456
Alignment:
Q  179 ccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttttttctctt 243  Q
    |||||||||||| ||||| |||||||||||||||| |||||| || | ||| |||||| ||||||    
T  31132392 ccacacaaaaatctgacaagtagtcacgtggaccccgcacaagcatactttttcttttctctctt 31132456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 38296200 - 38296304
Alignment:
Q  128 aaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatt 227  Q
    ||||||| |||||||||||||  | ||||||| |||||||||  || | ||||||||||||||  |||||||||  ||||||| ||  ||||| |||| |    
T  38296200 aaagagttatgatacatagactatcttaggtgtcaatacacctcttaatacccacacaaaaatcagacacgtagctacgtggatccaacacaagcacact 38296299  T
Q  228 ttctc 232  Q
    |||||    
T  38296300 ttctc 38296304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 10356639 - 10356694
Alignment:
Q  136 atgatacatagacacttttaggtggcaataca-ccctttgacacccacacaaaaat 190  Q
    ||||||||||||||   ||||||||||||||| ||| |||||||||||||||||||    
T  10356639 atgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaat 10356694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 253
Target Start/End: Complemental strand, 6260101 - 6259979
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||| |||    |||||| ||||||||||||| |||||||| ||||||| | |||| | ||||| ||||||   || || |||| ||||    
T  6260101 gagtaatgatacatacacaaccataggtgacaatacaccctttaacacccacgcaaaaatctaacacatggtcacatggacctcacagaagcacactttc 6260002  T
Q  231 tcttttttctcttcatctctctc 253  Q
    |||||  |||| || ||||||||    
T  6260001 tctttcatctcctcttctctctc 6259979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 199
Target Start/End: Original strand, 16327923 - 16327969
Alignment:
Q  153 ttaggtggcaatacaccctttgacacccacacaaaaatttgacacgt 199  Q
    ||||||||||||||| || |||||||||||| |||||| ||||||||    
T  16327923 ttaggtggcaatacatccattgacacccacataaaaatctgacacgt 16327969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 252
Target Start/End: Complemental strand, 39557594 - 39557496
Alignment:
Q  154 taggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttttttctcttcatctctct 252  Q
    ||||||| ||||||||  || ||| |||||||||||| ||||||||  |||| |||||||   |||| |||| |||||||||| |||| || |||||||    
T  39557594 taggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctcttttatctcctcttctctct 39557496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 3e-41; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 53982011 - 53982132
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| ||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 53982110  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  53982111 tcttttctctcctcttctctct 53982132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 33644200 - 33644321
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| ||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 33644299  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  33644300 tcttttctctcctcttctctct 33644321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 54868997 - 54868874
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||| |||||| |||| ||    
T  54868997 aagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactt 54868898  T
Q  229 tctcttttttctcttcatctctct 252  Q
    |||||||| |||| || |||||||    
T  54868897 tctcttttctctcatcttctctct 54868874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 17470404 - 17470526
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||  ||||| |||| |||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 17470503  T
Q  230 ctcttttttctcttcatctctct 252  Q
    ||||||| |||| || |||||||    
T  17470504 ctcttttctctcatcttctctct 17470526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 127 - 241
Target Start/End: Original strand, 49607410 - 49607524
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||  ||||| ||||     
T  49607410 aaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacac 49607509  T
Q  227 tttctcttttttctc 241  Q
    |||||||||| ||||    
T  49607510 tttctcttttctctc 49607524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 27714993 - 27714888
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||| |||| ||    
T  27714993 aagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 27714894  T
Q  229 tctctt 234  Q
    ||||||    
T  27714893 tctctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 52629305 - 52629421
Alignment:
Q  136 atgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttt 235  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||| |||| |||||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttt 52629404  T
Q  236 tttctcttcatctctct 252  Q
    | |||| || |||||||    
T  52629405 tctctcatcttctctct 52629421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 129 - 236
Target Start/End: Complemental strand, 11095455 - 11095350
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||| ||| ||||||| ||    
T  11095455 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt--accccgcataaacacactt 11095358  T
Q  229 tctctttt 236  Q
    ||||||||    
T  11095357 tctctttt 11095350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 127 - 241
Target Start/End: Original strand, 31456685 - 31456799
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||| |||||||||||||||||||   |||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||| ||||     
T  31456685 aaaaaagtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacac 31456784  T
Q  227 tttctcttttttctc 241  Q
    |||||||||| ||||    
T  31456785 tttctcttttctctc 31456799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 33118953 - 33118847
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    |||||| |||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||||||| ||    
T  33118953 aagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactt 33118854  T
Q  229 tctcttt 235  Q
    |||||||    
T  33118853 tctcttt 33118847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 8076393 - 8076514
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||| ||||  |||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||| |||||| |||| ||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||  |||| || |||||||    
T  8076493 tctttcctctcctcttctctct 8076514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 244
Target Start/End: Complemental strand, 48587187 - 48587078
Alignment:
Q  135 aatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctctt 234  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| || ||||||  ||| ||||||||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctctt 48587088  T
Q  235 ttttctcttc 244  Q
    || |||||||    
T  48587087 ttctctcttc 48587078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 9562998 - 9563120
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    |||||||||||||||| ||||  |||| || ||||||| ||||||||| ||| | |||||| ||||||||||||||||||| |||||||||||||| |||    
T  9562998 agagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacacttt 9563097  T
Q  230 ctcttttttctcttcatctctct 252  Q
    |||| || |||| || |||||||    
T  9563098 ctctcttctctcctcttctctct 9563120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 24700055 - 24699933
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||||||||||||||||||   |||| |||||||||||| ||||||||||||| |||||| || ||||| | ||||||||||||| ||||||||| |||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacacttt 24699956  T
Q  230 ctcttttttctcttcatctctct 252  Q
    ||||||  |||| || |||||||    
T  24699955 ctctttcctctcctcttctctct 24699933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 26141632 - 26141522
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| ||||||||||||||   ||||||||||||||||||||| |||||||||||||||| |||||||| ||||| |||||||  ||||| |||| ||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttc 26141533  T
Q  231 tcttttttctc 241  Q
    |||||| ||||    
T  26141532 tcttttctctc 26141522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 252
Target Start/End: Complemental strand, 11348026 - 11347901
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||||||| ||||||||||||||   ||||||| ||||||| ||||||||| |||||||||||| |||||||| | ||| ||||||||||| || ||||     
T  11348026 aaaagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacac 11347927  T
Q  227 tttctcttttttctcttcatctctct 252  Q
    |||||||||| |||| || |||||||    
T  11347926 tttctcttttctctcctcttctctct 11347901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 26754700 - 26754816
Alignment:
Q  136 atgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttt 235  Q
    ||||| |||||||||  |||||||||||||||||||| |||| |||||||||||| ||||| || ||||| ||||||| |||||| ||||||||||||||    
T  26754700 atgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctcttt 26754799  T
Q  236 tttctcttcatctctct 252  Q
      |||| || |||||||    
T  26754800 cctctcctcttctctct 26754816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 36707527 - 36707445
Alignment:
Q  128 aaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtgga 210  Q
    |||||||||||||||||||| ||  ||||||| ||||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  36707527 aaagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtgga 36707445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 252
Target Start/End: Complemental strand, 30801829 - 30801712
Alignment:
Q  135 aatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctctt 234  Q
    ||||||||||||||||  |||||||  |||||||||||||| |||||||||||||| ||||| |||||||  |||||||  ||||| |||||||||||||    
T  30801829 aatgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctctt 30801730  T
Q  235 ttttctcttcatctctct 252  Q
    |  |||| || |||||||    
T  30801729 tcctctcatcttctctct 30801712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 241
Target Start/End: Complemental strand, 41189866 - 41189754
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    |||||| |||||||||| |||   ||||||||||||||| | ||||||||||||| ||||||||||||||| | ||| ||||||| |||||| |||| ||    
T  41189866 aagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactt 41189767  T
Q  229 tctcttttttctc 241  Q
    |||||||| ||||    
T  41189766 tctcttttctctc 41189754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 35536625 - 35536730
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||||||||||||||||||   ||| ||||||||||||| ||||||||||||| |||||| |||||||| |||| ||||||| | ||||| |||| ||     
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttc 35536724  T
Q  230 ctcttt 235  Q
    ||||||    
T  35536725 ctcttt 35536730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 8956761 - 8956866
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||||||||||||||||||   ||| ||||||||||| ||||||||||||||| |||||| ||||||||  ||| ||||||| | ||||| |||| ||     
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttc 8956860  T
Q  230 ctcttt 235  Q
    ||||||    
T  8956861 ctcttt 8956866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 20765015 - 20764894
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| |||| |||||||||   |||||||| ||||||| |||| |||||||||||||||| |||||||| | ||| ||||||| | |||| |||| ||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttc 20764916  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  20764915 tcttttctctcatcttctctct 20764894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 241
Target Start/End: Original strand, 11907369 - 11907481
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    |||||| |||||||||||||||  ||||||| |||||||| | |  |||| ||||||||||| ||||| || ||||  ||||||| |||||| |||||||    
T  11907369 aagagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattt 11907468  T
Q  229 tctcttttttctc 241  Q
    |||||||| ||||    
T  11907469 tctcttttctctc 11907481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 235
Target Start/End: Complemental strand, 14623939 - 14623835
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||||||||||||||||||   |||||||||||||||||| |||||||||||| |||||| ||||| ||  ||| |||||||   ||||| |||| ||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  231 tcttt 235  Q
    |||||    
T  14623839 tcttt 14623835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 51419460 - 51419350
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| ||||||||||||||   |||| || ||||||| ||||| |||||||||||||||| |||||||| | ||| | ||||| |||||| |||| ||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  231 tcttttttctc 241  Q
    |||||| ||||    
T  51419360 tcttttctctc 51419350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 13898154 - 13898051
Alignment:
Q  132 agtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttct 231  Q
    |||||||||| ||| |||   |||||||||||||||||| |||||||||||| |||||| ||||||||  ||| |||||||   ||||| |||| |||||    
T  13898154 agtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttct 13898055  T
Q  232 cttt 235  Q
    ||||    
T  13898054 cttt 13898051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 41080709 - 41080828
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||||||||||||||||||   |||| | |||| |||||||||||||||||| ||||||| ||| | || |||| ||||||||  ||||| |||||||||    
T  41080709 gagtaatgatacatagacatccttag-tagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtggaccc-acacaagcacattttc 41080806  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||  |||| || |||||||    
T  41080807 tctttcatctcctcttctctct 41080828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 36331407 - 36331320
Alignment:
Q  153 ttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttttttct 240  Q
    |||||||||||| ||||| ||||||||||||||||||| ||||| || | ||  ||||||| ||||||  ||| ||||||||| ||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttct 36331320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 1758560 - 1758435
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccct--ttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||||| ||||||||||| ||    ||||| |||||||||||   ||||||||||||||||||| |||||  | || |||||||| |  |||||||||||    
T  1758560 aagagttatgatacatagtcaaccataggttgcaatacaccccccttgacacccacacaaaaatctgacatatggttacgtggactccacacaaacacat 1758461  T
Q  227 tttctcttttttctcttcatctctct 252  Q
    |||||||||  |||| || |||||||    
T  1758460 tttctctttcatctcctcttctctct 1758435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 47531865 - 47531975
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| ||||||||||||||   |||| |||||||||||| ||| ||| |||||||| ||| |||||||| | ||  || |||| |||||| |||| ||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  231 tcttttttctc 241  Q
    |||||| ||||    
T  47531965 tcttttctctc 47531975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 48375807 - 48375685
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||| ||||| |||||||||  ||||||| |||||||||| |  | | ||| |||||||| ||||  || ||||| ||||||| |||||| ||||||||    
T  48375807 agagttatgattcatagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcacatttt 48375708  T
Q  230 ctcttttttctcttcatctctct 252  Q
    ||||||  |||| || |||||||    
T  48375707 ctctttcctctcctcttctctct 48375685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 42823116 - 42823193
Alignment:
Q  136 atgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccc 213  Q
    |||||||||| ||||  ||| |||| ||||||||| |||||||||||| |||||||||||| || ||||  |||||||    
T  42823116 atgatacataaacaccattatgtggtaatacaccccttgacacccacaaaaaaatttgacatgtggtcatatggaccc 42823193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 45058652 - 45058588
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgaca 196  Q
    |||| |||||||||| ||||  |||||||||||||||||| |||||||||||| |||||| |||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccc-ttgacacccacataaaaatctgaca 45058588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 199
Target Start/End: Complemental strand, 35965876 - 35965806
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgt 199  Q
    ||||||||||||||||| |||   ||| |||  |||||| ||||||||||||||| |||||| ||||||||    
T  35965876 aagagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgt 35965806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 43745772 - 43745825
Alignment:
Q  157 gtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtgga 210  Q
    |||||||||||| |||||||| ||||  |||||||||||||||  |||||||||    
T  43745772 gtggcaatacactctttgacatccacgtaaaaatttgacacgtcatcacgtgga 43745825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 52629994 - 52629938
Alignment:
Q  157 gtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccct 214  Q
    ||||||||||||||||| |||||||||||||| | ||||||||||  || ||||||||    
T  52629994 gtggcaatacacccttt-acacccacacaaaattctgacacgtagcaacctggaccct 52629938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 25407225 - 25407125
Alignment:
Q  154 taggtggcaatacaccctttgacacccacac-aaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttttttctcttcatctctct 252  Q
    |||||||||||| |||| ||||||| ||||| |||||| ||||||||  |||  |||| ||  |||||||||| |||||||||  |||| || |||||||    
T  25407225 taggtggcaatataccccttgacacacacacaaaaaatctgacacgtgatcatatggatcccacacaaacacactttctctttcatctcctcttctctct 25407126  T
Q  253 c 253  Q
    |    
T  25407125 c 25407125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 36331479 - 36331419
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaat 190  Q
    ||||| |||||||||| ||||  |||| ||||||| ||||| |||||| ||||||||||||    
T  36331479 agagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaat 36331419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 48183151 - 48183028
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| ||    
T  48183151 aagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 48183052  T
Q  229 tctcttttttctcttcatctctct 252  Q
    |||||||| |||| || |||||||    
T  48183051 tctcttttctctcctcttctctct 48183028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 127 - 252
Target Start/End: Complemental strand, 480551 - 480426
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||| ||||     
T  480551 aaaagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacac 480452  T
Q  227 tttctcttttttctcttcatctctct 252  Q
    |||||||||| |||| || |||||||    
T  480451 tttctcttttctctcctcttctctct 480426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 127 - 252
Target Start/End: Complemental strand, 50052532 - 50052407
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||     
T  50052532 aaaagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 50052433  T
Q  227 tttctcttttttctcttcatctctct 252  Q
    |||||||||  |||| || |||||||    
T  50052432 tttctctttcctctcctcttctctct 50052407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 24995209 - 24995086
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    ||||||||||||| || |||||  |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||    
T  24995209 aagagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattt 24995110  T
Q  229 tctcttttttctcttcatctctct 252  Q
    |||||||| |||| || |||||||    
T  24995109 tctcttttctctcctcttctctct 24995086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 6034044 - 6034165
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| || |||||| |||| ||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttc 6034143  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  6034144 tcttttctctcctcttctctct 6034165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 11511562 - 11511457
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||| |||| ||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 11511463  T
Q  231 tctttt 236  Q
    ||||||    
T  11511462 tctttt 11511457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 41236347 - 41236468
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||| |||| ||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  41236447 tcttttctctcctcttctctct 41236468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 127 - 252
Target Start/End: Complemental strand, 42044471 - 42044346
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||  |||||||||||||||| |||||||||||||||||||||| |||||| ||||     
T  42044471 aaaagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 42044372  T
Q  227 tttctcttttttctcttcatctctct 252  Q
    |||||||||| |||| || |||||||    
T  42044371 tttctcttttctctcctcttctctct 42044346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 131 - 235
Target Start/End: Original strand, 3481654 - 3481758
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||  ||||| |||| ||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttc 3481753  T
Q  231 tcttt 235  Q
    |||||    
T  3481754 tcttt 3481758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 29234346 - 29234224
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    |||||||||||||||||||||  |||| |||||||||||||||||| |||  ||||||||| |||||||||||||||||||||| |||||| |||| |||    
T  29234346 agagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 29234247  T
Q  230 ctcttttttctcttcatctctct 252  Q
    ||||||| |||| || |||||||    
T  29234246 ctcttttctctcctcttctctct 29234224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 54473633 - 54473512
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  ||||||| ||||||||| |||||||||||||||||||| | |||||||||||||||||||| |||||| |||| |||     
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttta 54473534  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  54473533 tcttttctctcctcttctctct 54473512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 29239883 - 29240007
Alignment:
Q  128 aaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatt 227  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||||| |||||||||||| | ||||||||||||||||||||  ||||| |||| |    
T  29239883 aaagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacact 29239982  T
Q  228 ttctcttttttctcttcatctctct 252  Q
    ||||||||  |||| || |||||||    
T  29239983 ttctctttcctctcctcttctctct 29240007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 50526271 - 50526192
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtgga 210  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtgga 50526192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 23608233 - 23608356
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    ||||||||||||| ||||||||  |||| || ||||||||| |||||||||||||||||||| ||||||||||||||||| || |  ||||| |||| ||    
T  23608233 aagagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactt 23608332  T
Q  229 tctcttttttctcttcatctctct 252  Q
    |||||||| |||| || |||||||    
T  23608333 tctcttttatctcctcttctctct 23608356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 31910192 - 31910313
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| ||||||||||||||   ||||||| |||||||| ||||||||||||||||||||| |||||| ||| ||| ||||||| |||||| |||| ||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttc 31910291  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  31910292 tcttttctctcatcttctctct 31910313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 240
Target Start/End: Original strand, 32766956 - 32767067
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    |||||| |||||||||| ||||| |||||||||||||||||| |||||||||| |||||||| ||||| || | ||  ||||||||||||||  ||| ||    
T  32766956 aagagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactt 32767055  T
Q  229 tctcttttttct 240  Q
    ||||||| ||||    
T  32767056 tctctttcttct 32767067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 169 - 252
Target Start/End: Original strand, 41823920 - 41824003
Alignment:
Q  169 cctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttttttctcttcatctctct 252  Q
    ||||| |||||||||||||||| |||||||||||||| ||||||| |||||| |||| |||||||||| ||||||| |||||||    
T  41823920 cctttaacacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttttctctcttcttctctct 41824003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 19670822 - 19670707
Alignment:
Q  125 tgaaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacac 224  Q
    |||||||||| |||||||||| ||||  |||||||||||||||||| ||||||| ||||||||||| ||||| || | ||  ||||||| ||||||  ||    
T  19670822 tgaaaagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtac 19670723  T
Q  225 attttctcttttttct 240  Q
    | ||||||||| ||||    
T  19670722 actttctctttcttct 19670707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 240
Target Start/End: Original strand, 55475189 - 55475300
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    |||||| |||||||||| |||   |||||||||||||||||||||||||||||||||||||| ||||| || | ||  ||||||||||| ||  ||| ||    
T  55475189 aagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactt 55475288  T
Q  229 tctcttttttct 240  Q
    ||||||| ||||    
T  55475289 tctctttcttct 55475300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 29977883 - 29977989
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    ||||||||||||||||| | |    ||||||||||||||||| || |||||||||||||||| |||||||||||||  |||||||  ||||| |||| ||    
T  29977883 aagagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactt 29977982  T
Q  229 tctcttt 235  Q
    |||||||    
T  29977983 tctcttt 29977989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 50813993 - 50813883
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||| |||||||||| ||||| |||||||| ||||||||| ||||||||||||||||||| ||||| || ||||  || |||| ||||||  ||| |||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacacttt 50813894  T
Q  230 ctcttttttct 240  Q
    |||||| ||||    
T  50813893 ctctttcttct 50813883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 40574779 - 40574900
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| ||||||||||||||   |||||||| ||||||||||||||||||||||||||||| |||||||  |  || |||| || | |||| |||| ||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagcacactttc 40574878  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  40574879 tcttttctctcctcttctctct 40574900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 252
Target Start/End: Complemental strand, 53352660 - 53352545
Alignment:
Q  136 atgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttt 235  Q
    |||||||||||||||  ||||||| |||||||  |||| ||||| |||||||||| ||||||||||| | |||||||| |||||| || | |||||||||    
T  53352660 atgatacatagacacccttaggtg-caatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctcttt 53352562  T
Q  236 tttctcttcatctctct 252  Q
    | |||| || |||||||    
T  53352561 tctctcctcttctctct 53352545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 47104542 - 47104665
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    ||||||||||||| ||||||| | |||| || |||||||| || ||||||||||||||||||||||||||| ||    | |||||  |||||||||| ||    
T  47104542 aagagtaatgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacacgtggttttattgaccccacacaaacacactt 47104641  T
Q  229 tctcttttttctcttcatctctct 252  Q
    |||||||  |||| || |||||||    
T  47104642 tctctttcatctcctcttctctct 47104665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 44536846 - 44536781
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgaca 196  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||||| |||||||||||| |||||    
T  44536846 agagttatgatacataaacacttttaggtggcaatacaccc-ttgacatccacacaaaaatctgaca 44536781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 17983821 - 17983734
Alignment:
Q  153 ttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttttttct 240  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| || | ||  ||||||| ||||||  ||| ||||||||| ||||    
T  17983821 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttct 17983734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 47986207 - 47986312
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||| |||||||||| ||||  ||||||||||||||| || |||||| |||||||||||| ||||| || | ||  ||||||| ||||||  ||| |||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 47986306  T
Q  230 ctcttt 235  Q
    ||||||    
T  47986307 ctcttt 47986312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 29548061 - 29547994
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgaca 196  Q
    |||||| |||||||||| |||   ||||||||||||||| || ||||||||||||||||||| |||||    
T  29548061 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgaca 29547994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 232
Target Start/End: Complemental strand, 28480369 - 28480267
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||| || |||||||||||   ||||||| ||||||||   || |||| ||||||||||| ||||| ||||||| ||||||||  |||||||||| |||    
T  28480369 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28480270  T
Q  230 ctc 232  Q
    |||    
T  28480269 ctc 28480267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 232
Target Start/End: Complemental strand, 28481244 - 28481142
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||| || |||||||||||   ||||||| ||||||||   || |||| ||||||||||| ||||| ||||||| ||||||||  |||||||||| |||    
T  28481244 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28481145  T
Q  230 ctc 232  Q
    |||    
T  28481144 ctc 28481142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 232
Target Start/End: Complemental strand, 28482119 - 28482017
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||| || |||||||||||   ||||||| ||||||||   || |||| ||||||||||| ||||| ||||||| ||||||||  |||||||||| |||    
T  28482119 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28482020  T
Q  230 ctc 232  Q
    |||    
T  28482019 ctc 28482017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 55079814 - 55079749
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgaca 196  Q
    |||| |||||||||| ||||  |||||||||||||||||  |||||||||| |||||||| |||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgaca 55079749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 18769141 - 18769213
Alignment:
Q  163 atacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttt 235  Q
    ||||||||| | |||||||||||||||| |||||||| |||| ||  ||||  |||||| |||||||||||||    
T  18769141 atacaccctctaacacccacacaaaaatctgacacgtggtcatgtaaaccccacacaaatacattttctcttt 18769213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 252
Target Start/End: Complemental strand, 48647796 - 48647705
Alignment:
Q  161 caatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttttttctcttcatctctct 252  Q
    |||||||||  || ||||||||| |||||| | |||||| ||||||||||| | |||||| |||| |||||||||  |||| || |||||||    
T  48647796 caatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatttctctttcctctcctcttctctct 48647705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 8343263 - 8343198
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgaca 196  Q
    |||| |||||||||| |||   ||||||||||||||| ||||||||||| ||| |||||| |||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgaca 8343198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 252
Target Start/End: Complemental strand, 56300225 - 56300144
Alignment:
Q  171 tttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttttttctcttcatctctct 252  Q
    ||||||| |||||||||||| ||||| || ||||  || | |||||||||||||| |||||||||  |||| || |||||||    
T  56300225 tttgacatccacacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctctttcctctcctcttctctct 56300144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 5e-40; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 9058478 - 9058601
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||| |||| ||    
T  9058478 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 9058577  T
Q  229 tctcttttttctcttcatctctct 252  Q
    |||||||| |||| || |||||||    
T  9058578 tctcttttctctcctcttctctct 9058601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 7465836 - 7465714
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||| |||| |||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 7465737  T
Q  230 ctcttttttctcttcatctctct 252  Q
    ||||||| ||||||| |||||||    
T  7465736 ctcttttatctcttcttctctct 7465714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 134 - 252
Target Start/End: Original strand, 28863458 - 28863576
Alignment:
Q  134 taatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctct 233  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| |||||||    
T  28863458 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 28863557  T
Q  234 tttttctcttcatctctct 252  Q
    ||| |||| || |||||||    
T  28863558 tttatctcctcttctctct 28863576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 127 - 252
Target Start/End: Complemental strand, 33436204 - 33436079
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||| ||||     
T  33436204 aaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacac 33436105  T
Q  227 tttctcttttttctcttcatctctct 252  Q
    |||||||||  |||| || |||||||    
T  33436104 tttctctttcctctcatcttctctct 33436079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 5574589 - 5574483
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| || |||||| |||| |||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 5574490  T
Q  230 ctctttt 236  Q
    |||||||    
T  5574489 ctctttt 5574483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 134 - 252
Target Start/End: Complemental strand, 19930917 - 19930799
Alignment:
Q  134 taatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctct 233  Q
    |||||||||||||||||  ||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| ||||||||||| |||||||    
T  19930917 taatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctct 19930818  T
Q  234 tttttctcttcatctctct 252  Q
    ||| |||| || |||||||    
T  19930817 tttctctcctcttctctct 19930799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 13438343 - 13438464
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  ||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| ||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13438442  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  13438443 tcttttctctcctcttctctct 13438464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 17473020 - 17473141
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||| |||| ||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  17473120 tcttttctctcctcttctctct 17473141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 40701478 - 40701599
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||| |||||| |||| ||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 40701577  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  40701578 tcttttctctcatcttctctct 40701599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 129 - 241
Target Start/End: Complemental strand, 10249484 - 10249372
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    ||||||||||||||||||||||  ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||| |||| ||    
T  10249484 aagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 10249385  T
Q  229 tctcttttttctc 241  Q
    |||||||| ||||    
T  10249384 tctcttttctctc 10249372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 30915461 - 30915584
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattt 228  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||| | |||| |||| ||    
T  30915461 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 30915560  T
Q  229 tctcttttttctcttcatctctct 252  Q
    |||||||| |||| || |||||||    
T  30915561 tctcttttctctcatcttctctct 30915584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 32505749 - 32505627
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    |||||||||||||||||||||  ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||| |||| |||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32505650  T
Q  230 ctcttttttctcttcatctctct 252  Q
    || |||| |||| || |||||||    
T  32505649 ctattttctctcctcttctctct 32505627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 28381755 - 28381634
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  ||||||||||||||||| || ||||||||||||||||| |||||||||||||| ||||| | |||||| |||| ||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttc 28381656  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||| |||| || |||||||    
T  28381655 tcttttctctcatcttctctct 28381634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 127 - 252
Target Start/End: Original strand, 20700811 - 20700936
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||||||||||||||||||||||   ||| |||||||||||||||||||| || |||||||||| |||||||||||||||||||||| ||| || ||||     
T  20700811 aaaagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacac 20700910  T
Q  227 tttctcttttttctcttcatctctct 252  Q
    |||||||||  |||| || |||||||    
T  20700911 tttctctttcctctcctcttctctct 20700936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 131 - 235
Target Start/End: Original strand, 27864704 - 27864808
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||| ||| || |||| ||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttc 27864803  T
Q  231 tcttt 235  Q
    |||||    
T  27864804 tcttt 27864808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 241
Target Start/End: Complemental strand, 38273246 - 38273132
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||||||| |||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||| ||| ||||||| |||| | ||||     
T  38273246 aaaagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacac 38273147  T
Q  227 tttctcttttttctc 241  Q
    |||||||||| ||||    
T  38273146 tttctcttttctctc 38273132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 40614002 - 40613892
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||| |||||||| | ||| ||||||| |||||| |||| ||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttc 40613903  T
Q  231 tcttttttctc 241  Q
    |||||| ||||    
T  40613902 tcttttctctc 40613892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 17820104 - 17819983
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| ||||||||||||||  | ||||||||||||||||| ||||||||||||||||||| ||||| || || ||||||||||  |||||||||||||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttc 17820005  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||  |||| || |||||||    
T  17820004 tctttcatctcctcttctctct 17819983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 38882916 - 38882832
Alignment:
Q  128 aaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccc 213  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||    
T  38882916 aaagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggaccc 38882832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 127 - 241
Target Start/End: Original strand, 42257189 - 42257303
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||||||| ||||||||||||||  |||||||||||||||| | ||||||||||||| |||||| |||||||| | ||| ||||||| |||||| ||||     
T  42257189 aaaagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacac 42257288  T
Q  227 tttctcttttttctc 241  Q
    |||||||||| ||||    
T  42257289 tttctcttttctctc 42257303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 4060685 - 4060806
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    ||||||||||||||||||||  ||||||| ||||||||| ||||||| |||||||||||| ||||||||||| ||||||| || ||| || |||| ||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4060784  T
Q  231 tcttttttctcttcatctctct 252  Q
    | |||| |||| || |||||||    
T  4060785 ttttttctctcatcttctctct 4060806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 26891607 - 26891500
Alignment:
Q  128 aaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatt 227  Q
    ||||||| ||||||||||| |||  |||||||||||||||||| | ||||||||||||||||| ||||| || ||||||||||||  | |||| ||||||    
T  26891607 aaagagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacatt 26891508  T
Q  228 ttctcttt 235  Q
    ||||||||    
T  26891507 ttctcttt 26891500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 2533123 - 2533244
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||| ||||||||||||||   ||| ||||||||||| ||||||||||| |||||||||| |||||||||| ||| | ||||| |||||| |||| |||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgacacc-acacaaaaatctgacacgtagccacatagaccccgcacaagcacacttt 2533221  T
Q  230 ctcttttttctcttcatctctct 252  Q
     |||||| |||| || |||||||    
T  2533222 ttcttttatctcctcttctctct 2533244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 33436210 - 33436315
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||||||||||||||||||   |||| |||||||||||| ||||||||||||| |||||| ||||||||   || ||||||  ||||||| |||| |||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacacttt 33436309  T
Q  230 ctcttt 235  Q
    ||||||    
T  33436310 ctcttt 33436315  T

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Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 235
Target Start/End: Original strand, 41575138 - 41575242
Alignment:
Q  132 agtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtgga-ccctgcacaaacacattttc 230  Q
    ||||||||||||||||||   |||| ||| ||||||||||||||||  ||||||||||||||||| || |||| ||||| |||| ||||| |||| ||||    
T  41575138 agtaatgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttc 41575237  T
Q  231 tcttt 235  Q
    |||||    
T  41575238 tcttt 41575242  T

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Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 252
Target Start/End: Original strand, 3439985 - 3440100
Alignment:
Q  137 tgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctctttt 236  Q
    |||||| |||||||  |||||||||||||||| | | ||||||||||||||||| | ||| ||  | |||||||||| |||||| ||||||||||||||     
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctctttc 3440084  T
Q  237 ttctcttcatctctct 252  Q
     |||| || |||||||    
T  3440085 ctctcctcttctctct 3440100  T

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Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 241
Target Start/End: Original strand, 36168835 - 36168946
Alignment:
Q  130 agagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacatttt 229  Q
    ||||| ||||||||||||||   |||| || ||||||| ||||| || |||||||||||||||||||||| | ||| ||||||| |||||| || | |||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatacttt 36168934  T
Q  230 ctcttttttctc 241  Q
    ||||||| ||||    
T  36168935 ctcttttctctc 36168946  T

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Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 2997565 - 2997478
Alignment:
Q  153 ttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttttttct 240  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| || | ||  ||||||| ||||||  ||| ||||||||| ||||    
T  2997565 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttct 2997478  T

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Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 240
Target Start/End: Original strand, 38732354 - 38732463
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| |||||||||| ||||  ||| ||| ||||||| || ||||||||||||||||||| ||||| || ||||  ||||||| ||||||  ||| ||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  231 tcttttttct 240  Q
    ||||| ||||    
T  38732454 tctttcttct 38732463  T

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Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 43490121 - 43490186
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgaca 196  Q
    |||| |||||||||| ||||  ||||||| |||||||||| ||||||||||||||||||| |||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgaca 43490186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 45097839 - 45097726
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||||||| |||||||||| |||   ||||||||||||||| || |||||||||| |||||||| ||||| || | ||  ||||||| ||||||  |||     
T  45097839 aaaagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacac 45097740  T
Q  227 tttctcttttttct 240  Q
    ||||||||| ||||    
T  45097739 tttctctttcttct 45097726  T

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Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 3737986 - 3738043
Alignment:
Q  174 gacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttct 231  Q
    ||||||||||||||||| ||||| || |||| |||||||| |||||| ||||||||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcacattttct 3738043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 17823782 - 17823853
Alignment:
Q  129 aagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgta 200  Q
    ||||||||||||||||| |||   |||||||||||||||  | |  |||||||||||||||| |||||||||    
T  17823782 aagagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgacacgta 17823853  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 13365347 - 13365418
Alignment:
Q  127 aaaagagtaatgatacatagacactt--ttaggtggcaatacaccctttgacacccacacaaaaatttgaca 196  Q
    |||||||| |||||||||| ||||    |||| |||||||| |||| ||||||||||||||||||| |||||    
T  13365347 aaaagagttatgatacataaacacacccttagatggcaatataccccttgacacccacacaaaaatctgaca 13365418  T

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Target: scaffold0321 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 127 - 252
Target Start/End: Complemental strand, 10213 - 10088
Alignment:
Q  127 aaaagagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacat 226  Q
    |||||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||| |||||| |||||||||||||||||||||  | |||| ||||     
T  10213 aaaagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacac 10114  T
Q  227 tttctcttttttctcttcatctctct 252  Q
    |||||||||| |||| || |||||||    
T  10113 tttctcttttctctcctcttctctct 10088  T

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Target: scaffold1268 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 1029 - 908
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||||||||||||||||||  |||||||||||||||||||||| ||| |||||||||||  ||||||||||||||||| | || |||||| |||| ||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||  |||| || |||||||    
T  929 tctttcctctcctcttctctct 908  T

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Target: scaffold1267 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 1029 - 908
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||||||||||||||||||  |||||||||||||||||||||| ||| |||||||||||  ||||||||||||||||| | || |||||| |||| ||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  231 tcttttttctcttcatctctct 252  Q
    |||||  |||| || |||||||    
T  929 tctttcctctcctcttctctct 908  T

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Target: scaffold0237 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 4029 - 4134
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||||||||||||||||||| ||||| |||||||||||| ||| |||||||||||||||| ||||||||||| ||||||| || ||| || |||| ||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  231 tctttt 236  Q
    ||||||    
T  4129 tctttt 4134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 235
Target Start/End: Complemental strand, 8963 - 8859
Alignment:
Q  131 gagtaatgatacatagacacttttaggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttc 230  Q
    |||| |||||| |||||||   ||| ||| ||||||||  ||||||| | ||||||||||||||||| |||||||||||||||  |||||  ||||||||    
T  8963 gagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaagtacattttc 8864  T
Q  231 tcttt 235  Q
    |||||    
T  8863 tcttt 8859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 152523 - 152607
Alignment:
Q  156 ggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttttttct 240  Q
    ||||||||||||||| ||||||||||||||||||| ||||| || ||||  |||| || ||||||| ||| ||||||||| ||||    
T  152523 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctctttcttct 152607  T

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Target: scaffold0316 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 235
Target Start/End: Original strand, 17077 - 17158
Alignment:
Q  154 taggtggcaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacacattttctcttt 235  Q
    ||||| |||||||| || | |||| |||||||||||| ||||| || ||||| ||||||| |||||| ||||||||||||||    
T  17077 taggttgcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctcttt 17158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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