View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4422_high_7 (Length: 368)
Name: NF4422_high_7
Description: NF4422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4422_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 1 - 353
Target Start/End: Original strand, 30402772 - 30403124
Alignment:
| Q |
1 |
catgaatttcatagaacatgcatagacaaatggttgaaggagattcagaggtatgagaaaatacatattcagatttccttcttgtttctatcactagagt |
100 |
Q |
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| T |
30402772 |
catgaatttcatagaacatgcatagacaaatggttgaaggagattcacaggtatgagaaaatagatatccagatttccttcttgtttctatcactagagt |
30402871 |
T |
|
| Q |
101 |
tacacatttgcaccatttccctccaatacagaagatctgaaacatatccatattacctgtacatacgatatgaggaaccagagatgcacgcgcatctgca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
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| T |
30402872 |
tacacatttgcaccatttccctccaatacagaagatctgaaacatatccatattacctgtacatatgatacgaggaaccagagatgcacgcgcatctgca |
30402971 |
T |
|
| Q |
201 |
taaaataacttcaaaagcaaaaaatttatagcttacatattttcaatcatgggacaccaacccccttttctaacttggcaacatatttatcttgtatctc |
300 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
30402972 |
taaaataacttcaaaagcaaaaaatttatagcgtacatattttcaatcatgggacacctacccccttttctaacttggcaacatatttatcttgtatctc |
30403071 |
T |
|
| Q |
301 |
tagctcttcaaatgttttcttatttattagcacaggatttaagattaagtatg |
353 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
30403072 |
tagctcttcaaatgttttcttatttattagcacagggtttaagattaagtatg |
30403124 |
T |
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