View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4423-Insertion-2 (Length: 1029)
Name: NF4423-Insertion-2
Description: NF4423
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4423-Insertion-2 |
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Alignment Details
Target: chr7 (Bit Score: 113; Significance: 1e-56; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 819 - 983
Target Start/End: Original strand, 41104850 - 41105003
Alignment:
| Q |
819 |
cttaatatatccatccatctcaaaaacgcgatgatgatatagggacatcaaatttaatattaaaatattgtattccttaatattaaattctatcataatt |
918 |
Q |
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| T |
41104850 |
cttaatatatccatccatctcaaaaacgcgatgatgatatagggatatcaaatt---------aatattgtattccttaatattaa-ttctatcata-tt |
41104938 |
T |
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| Q |
919 |
tgtggaagaatttaagtcgttacaaaagtcacaaacaatacattatacatgtttgagacgaaagt |
983 |
Q |
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| T |
41104939 |
tgtggaagaatttaagtcgttacaaaagtcacaaacaatacattatacatgtttgagacgaaagt |
41105003 |
T |
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Target: chr7; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 726 - 795
Target Start/End: Original strand, 41104762 - 41104831
Alignment:
| Q |
726 |
taaaacttgatgaataatgagcacatacatatatatagtaaaacatctcaatatatccattcattccaac |
795 |
Q |
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| T |
41104762 |
taaaacttgatgaataatgaacacatacatatatatagtaaaacatctcaatatatccattcattccaac |
41104831 |
T |
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