View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4423-Insertion-8 (Length: 148)
Name: NF4423-Insertion-8
Description: NF4423
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4423-Insertion-8 |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 89; Significance: 3e-43; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 35421118 - 35421030
Alignment:
| Q |
60 |
ggtatcttttctattctagagagaggttgcaaaagtaaacacaacccaattttcttaacttaaacatgggttgttcagcctcaaaaaca |
148 |
Q |
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| T |
35421118 |
ggtatcttttctattctagagagaggttgcaaaagtaaacacaacccaattttcttaacttaaacatgggttgttcagcctcaaaaaca |
35421030 |
T |
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Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 35421172 - 35421139
Alignment:
| Q |
6 |
caaaatggtcctctaaaatagaaattcacccacc |
39 |
Q |
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| T |
35421172 |
caaaatggtcctctaaaatagaaattcacccacc |
35421139 |
T |
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