View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4424_high_1 (Length: 1054)

Name: NF4424_high_1
Description: NF4424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4424_high_1
NF4424_high_1
[»] chr7 (5 HSPs)
chr7 (8-1038)||(24906995-24908021)
chr7 (23-465)||(24889863-24890303)
chr7 (524-666)||(2212658-2212799)
chr7 (807-882)||(18264575-18264650)
chr7 (814-887)||(23869296-23869369)
[»] chr1 (4 HSPs)
chr1 (759-1038)||(31302245-31302520)
chr1 (522-629)||(35154572-35154681)
chr1 (804-872)||(25244983-25245051)
chr1 (804-882)||(25275089-25275167)
[»] chr5 (5 HSPs)
chr5 (523-643)||(11026769-11026889)
chr5 (522-675)||(24403656-24403809)
chr5 (806-882)||(8933907-8933983)
chr5 (804-882)||(5708120-5708198)
chr5 (815-872)||(9272896-9272953)
[»] chr4 (3 HSPs)
chr4 (525-629)||(40350454-40350558)
chr4 (521-657)||(6217640-6217776)
chr4 (805-887)||(41189587-41189669)
[»] chr3 (4 HSPs)
chr3 (524-608)||(14988302-14988387)
chr3 (804-862)||(9129510-9129568)
chr3 (804-862)||(9137617-9137675)
chr3 (804-858)||(34365439-34365493)
[»] chr6 (1 HSPs)
chr6 (804-882)||(26857966-26858044)
[»] chr8 (2 HSPs)
chr8 (525-594)||(7561317-7561386)
chr8 (521-608)||(12768583-12768670)
[»] scaffold0102 (1 HSPs)
scaffold0102 (804-882)||(14385-14463)
[»] chr2 (2 HSPs)
chr2 (804-882)||(17893953-17894031)
chr2 (804-882)||(43323718-43323796)


Alignment Details
Target: chr7 (Bit Score: 959; Significance: 0; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 959; E-Value: 0
Query Start/End: Original strand, 8 - 1038
Target Start/End: Complemental strand, 24908021 - 24906995
Alignment:
Q  8 cagcacagaccaaccatgaaacaagttctacaaatgctttccagacaagttcatcttaatgagaaggcattgactgagcctggaatatacagatggaatg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24908021 cagcacagaccaaccatgaaacaagttctacaaatgctttccagacaagttcatcttaatgagaaggcattgactgagcctggaatatacagatggaatg 24907922  T
Q  108 cttccgcaaagacgagtggttctttgaatgagatttcatcgtcatctcaagtaatcaagcacaaaaaatatgaaaatcgatgtcaaacctctacgcaatt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24907921 cttccgcaaagacgagtggttctttgaatgagatttcatcgtcatctcaagtaatcaagcacaaaaaatatgaaaatcgatgtcaaacctctacgcaatt 24907822  T
Q  208 tagcggtacagatattgtgacagagatgtttcctagatgatggttactatttacaaatgatgttggttccatgtttctggtatatgatgtatttatcatt 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24907821 tagcggtacagatattgtgacagagatgtttcctagatgatggttactatttacaaatgatgttggttccatgtttctggtatatgatgtatttatcgtt 24907722  T
Q  308 tagttgttaggatacatgtggttccaaagggaatcatgggttaaattcattatgatgaatcttatttcttatgttgttggatactgcattaaataaatgt 407  Q
    ||||| ||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24907721 tagttattaggatacatgtggttccaaagggaatcatg------attcattatgatgaatcttatttcttatattgttggatactgcattaaataaatgt 24907628  T
Q  408 tcatatatttacttctgttattgcttattggttccacattccataaaaacattgatcagcaataacacgtttcaaagagccaaacccatgtttcaaagag 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24907627 tcatatatttacttctgttattgcttattggttccacattccataaaaacattgatcagcaataacacgtttcaaagagccaaacccatgtttcaaagag 24907528  T
Q  508 ctaacagttaaaggacctgtttggtttggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagcttgctttcctagctt 607  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24907527 ctaacagtgaaaggacctgtttggtttggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagcttgctttcctagctt 24907428  T
Q  608 tcacgacaatgtgatttcttgctactgttttgaaaattacaatgccattcgagacatactaaaagatgcagtaacaaattataataaattattacttatc 707  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24907427 tcacgacaatgtgatttcttgcaactgttttgaaaattacaacgccattcgagacatactaaaagatgcagtaacacattataataaattattacttatc 24907328  T
Q  708 aaggaagatatc--aaatacgtaataacaatgagctcaaggaaaatgtggaaattcaaataaccaaccgaggtataaaatgaaagtaacgttacagaagg 805  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24907327 aaggaagatatcaaaaagacgtaataacaatgagctcaaggaaaatgtggaaattcaaataaccaaccgaggtataaaatgaaagtaacgttacataagg 24907228  T
Q  806 gtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaatttttcttcttcttatattagaa 905  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24907227 gtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaatttttcttcttcttatattagaa 24907128  T
Q  906 acgtcgttacatgcgactctagattataaatgggacgtttaaccttgccctttcgtccataattttcttcttcttattagaaatgtaatccacagcttct 1005  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24907127 acgtcgttacatgcaactctagattataaatgggacgtttaaccttgccctttcgtccataattttcttcttcttattagaaatgtaatccacagcttct 24907028  T
Q  1006 ctctcaaccaaatgcttacttctattttcatat 1038  Q
    |||||||||||||||||||||||||||||||||    
T  24907027 ctctcaaccaaatgcttacttctattttcatat 24906995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 297; E-Value: 1e-166
Query Start/End: Original strand, 23 - 465
Target Start/End: Complemental strand, 24890303 - 24889863
Alignment:
Q  23 atgaaacaagttctacaaatgctttccagacaagttcatcttaatgagaaggcattgactgagcctggaatatacagatggaatgcttccgcaaagacga 122  Q
    |||||||| ||||||||||||||||||| ||||||||||  ||  ||||||||||||||||||| ||||||||||| || |||||| |||||||||||||    
T  24890303 atgaaacatgttctacaaatgctttccaaacaagttcat--tatggagaaggcattgactgagcatggaatatacaaatagaatgcctccgcaaagacga 24890206  T
Q  123 gtggttctttgaatgagatttcatcgtcatctcaagtaatcaagcacaaaaaatatgaaaatcgatgtcaaacctctacgcaatttagcggtacagatat 222  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  24890205 gtggttctttgaatgagatgtcatcgtcatctcaagtaatcaagcacaaaaaatatgaaaatcgacatcaaacctctacgcaatttagcggtacagatat 24890106  T
Q  223 tgtgacagagatgtttcctagatgatggttactatttacaaatgatgttggttccatgtttctggtatatgatgtatttatc-atttagttgttaggata 321  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||  || |||||| |||||||||||||  ||| ||||||||||||    
T  24890105 tgtgacagagatgtttcctagatgatggttactatttgcaaatgatgttgggttcatacttttggtatgtgatgtatttatcttttttgttgttaggata 24890006  T
Q  322 catgtggttccaaagggaatcatgggttaaattcattatgatgaatcttatttcttatgttgttggatactgcattaaataaatgttcatatatttactt 421  Q
    |||||||||||||||||||| ||||| |||||  ||||||||||||||||||||||||||||| || |||| |||| |||||||||||||||||||||||    
T  24890005 catgtggttccaaagggaataatggg-taaatatattatgatgaatcttatttcttatgttgtggggtactacattgaataaatgttcatatatttactt 24889907  T
Q  422 ctgttattgcttattggttccacattccataaaaacattgatca 465  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||    
T  24889906 ctgttattgcttattggttccactttccatacaaaaattgatca 24889863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 524 - 666
Target Start/End: Original strand, 2212658 - 2212799
Alignment:
Q  524 ctgtttggtttggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagcttgctttcctagctttcacgacaatgtgatt 623  Q
    |||||||||||||||| |||||||| |||||||||| || ||| |||||||||||  ||||||| ||||| |||||||||||||||||| |||  |||||    
T  2212658 ctgtttggtttggcggtgggaaagccaaacccacgtctcgaagggcaactttcgtggaaattgagaagctagctttcctagctttcacggcaacatgatt 2212757  T
Q  624 tcttgctactgttttgaaaattacaatgccattcgagacatac 666  Q
    |||||| ||  ||||||||| ||||| ||||||| | ||||||    
T  2212758 tcttgccacaattttgaaaa-tacaacgccattctaaacatac 2212799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 807 - 882
Target Start/End: Complemental strand, 18264650 - 18264575
Alignment:
Q  807 tggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaa 882  Q
    ||||||| |||||||  | |||||||  |||||||||| |||| ||||||||||||| |||||||| | |||||||    
T  18264650 tggcaatatgatccatgagatccatatccatccaatccatccactacaaaatccatccaatccatccatcaaacaa 18264575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 814 - 887
Target Start/End: Complemental strand, 23869369 - 23869296
Alignment:
Q  814 gtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaattttt 887  Q
    ||||||||| |||||||| ||||||| ||   |||| ||||||||| |||  ||||||| ||||||||||||||    
T  23869369 gtgatccactaaatccattatcatccgattaatccactacaaaatctatcagatccatccaccaaacaattttt 23869296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 202; Significance: 1e-110; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 759 - 1038
Target Start/End: Original strand, 31302245 - 31302520
Alignment:
Q  759 ttcaaataaccaaccgaggtataaaatgaaagtaacgttacagaagggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaat 858  Q
    |||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  31302245 ttcaaataaccaactgaggtataaaattaaagtaacgttacataagggtggcaatgtgatccaccaaatccatatccatccaatccctcgagtacaaaat 31302344  T
Q  859 ccatctaatccatctaccaaacaatttttcttcttcttatattagaaacgtcgttacatgcgactctagattataaatgggacgtttaaccttgcccttt 958  Q
    ||||||||| ||||||||||||||||||||  ||||||||  |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31302345 ccatctaattcatctaccaaacaatttttc--cttcttat--tagaaatgtcgttacatgcgactctagattataaatgggacgtttcaccttgcccttt 31302440  T
Q  959 cgtccataattttcttcttcttattagaaatgtaatccacagcttctctctcaaccaaatgcttacttctattttcatat 1038  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||||||| |||||||||||||||||||| |||||    
T  31302441 cgtccataattttcttcttcttattagaaacgtattccacagcctctctctcagccaaatgcttacttctatttgcatat 31302520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 522 - 629
Target Start/End: Complemental strand, 35154681 - 35154572
Alignment:
Q  522 acctgtttggtttggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagctt--gctttcctagctttcacgacaatgt 619  Q
    ||||||||||||||||   || ||||| ||||  |||||||||||||||| ||||||  |||| || | ||||  |||||||||||||||||| |||  |    
T  35154681 acctgtttggtttggcaatggaaaagccaaacatacgtttcaaagagcaaatttcgtggaaatggagatgcttttgctttcctagctttcacggcaacat 35154582  T
Q  620 gatttcttgc 629  Q
    ||||||||||    
T  35154581 gatttcttgc 35154572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 804 - 872
Target Start/End: Original strand, 25244983 - 25245051
Alignment:
Q  804 gggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatc 872  Q
    |||||||||| |||||||  | |||||||  |||||||||| |||| ||||||||||||| ||||||||    
T  25244983 gggtggcaatatgatccatgagatccatatccatccaatccatccactacaaaatccatcaaatccatc 25245051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 804 - 882
Target Start/End: Original strand, 25275089 - 25275167
Alignment:
Q  804 gggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaa 882  Q
    |||||||||| |||||||  | || ||||  |||||||||| |||| ||||||||||||| |||||||| | |||||||    
T  25275089 gggtggcaatatgatccatgagattcatatccatccaatccatccactacaaaatccatccaatccatccatcaaacaa 25275167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 8e-33; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 523 - 643
Target Start/End: Complemental strand, 11026889 - 11026769
Alignment:
Q  523 cctgtttggtttggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagcttgctttcctagctttcacgacaatgtgat 622  Q
    ||||||||||||||| | |||||||| |||||||||||||||||||| ||||||||  ||||||| |||||| ||||||||||||||||||||| |||||    
T  11026889 cctgtttggtttggcagtgggaaagccaaacccacgtttcaaagagcgactttcgtggaaattgagaagctttctttcctagctttcacgacaacgtgat 11026790  T
Q  623 ttcttgctactgttttgaaaa 643  Q
    |||||||  | ||||||||||    
T  11026789 ttcttgccgcagttttgaaaa 11026769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 522 - 675
Target Start/End: Original strand, 24403656 - 24403809
Alignment:
Q  522 acctgtttggtttggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagcttgctttcctagctttcacgacaatgtga 621  Q
    |||||||||||||| ||| |||||||| |||||||| |||||||||||||||||| || ||||  |  | |||||||||||| |||||||||||| ||||    
T  24403656 acctgtttggtttgacggtgggaaagccaaacccacatttcaaagagcaactttcctagaaatgaagtaacttgctttcctaactttcacgacaacgtga 24403755  T
Q  622 tttcttgctactgttttgaaaattacaatgccattcgagacatactaaaagatg 675  Q
    ||| ||||  | |||||||||| || |||| ||||| | ||||||  |||||||    
T  24403756 ttttttgccgcagttttgaaaaatataatgtcattccaaacatacgtaaagatg 24403809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 806 - 882
Target Start/End: Complemental strand, 8933983 - 8933907
Alignment:
Q  806 gtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaa 882  Q
    |||||||| |||||||  | ||||||| ||||||||||| |||| ||||||||||||| |||||||| | |||||||    
T  8933983 gtggcaatatgatccatgagatccatattcatccaatccatccactacaaaatccatccaatccatccatcaaacaa 8933907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 804 - 882
Target Start/End: Original strand, 5708120 - 5708198
Alignment:
Q  804 gggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaa 882  Q
    |||||||||| |||||||  | |||||||  |||||||||  |||| ||||||||||||| |||||||| | |||||||    
T  5708120 gggtggcaatatgatccatgagatccatatccatccaatctatccactacaaaatccatccaatccatccatcaaacaa 5708198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 815 - 872
Target Start/End: Complemental strand, 9272953 - 9272896
Alignment:
Q  815 tgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatc 872  Q
    ||||||| || |||||||  |||||||||| |||| ||||||||||||| ||||||||    
T  9272953 tgatccatcagatccatatccatccaatccatccactacaaaatccatccaatccatc 9272896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 3e-23; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 525 - 629
Target Start/End: Complemental strand, 40350558 - 40350454
Alignment:
Q  525 tgtttggtttggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagcttgctttcctagctttcacgacaatgtgattt 624  Q
    ||||||||||||| | |||||||| |||||||||||||||||||||| |||| || |||| || ||||| ||||||||| |||||||||||| |||||||    
T  40350558 tgtttggtttggcagtgggaaagccaaacccacgtttcaaagagcaattttcatagaaatggagaagctcgctttcctaactttcacgacaacgtgattt 40350459  T
Q  625 cttgc 629  Q
     ||||    
T  40350458 tttgc 40350454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 521 - 657
Target Start/End: Complemental strand, 6217776 - 6217640
Alignment:
Q  521 gacctgtttggtttggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagcttgctttcctagctttcacgacaatgtg 620  Q
    ||||| ||||||||||||| || ||||| ||||   ||| | |||||||||||||||| |||||  | ||||||  ||||||||||||||||  || |||    
T  6217776 gacctctttggtttggcggtggaaaagccaaactatcgtcttaaagagcaactttcgtgaaaatgaagaagcttagtttcctagctttcacggtaacgtg 6217677  T
Q  621 atttcttgctactgttttgaaaattacaatgccattc 657  Q
     ||||||||  | |||||||||| |||||||| ||||    
T  6217676 gtttcttgccgcagttttgaaaaatacaatgctattc 6217640  T

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Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 805 - 887
Target Start/End: Original strand, 41189587 - 41189669
Alignment:
Q  805 ggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaattttt 887  Q
    ||||||||| |||||||  | |||||||  |||||||||| |||| ||||||||||||| |||||||| | ||||||| ||||    
T  41189587 ggtggcaatatgatccatgagatccatatccatccaatccatccactacaaaatccatccaatccatccatcaaacaaatttt 41189669  T

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Target: chr3 (Bit Score: 46; Significance: 1e-16; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 524 - 608
Target Start/End: Complemental strand, 14988387 - 14988302
Alignment:
Q  524 ctgtttggttt-ggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagcttgctttcctagcttt 608  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||| |||||||| |||||  |||||||| |||||||||||||    
T  14988387 ctgtttggttttggcggtgggaaagccaaacccacgtttcaaggagctactttcgtgaaaatctaaaagcttactttcctagcttt 14988302  T

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Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 804 - 862
Target Start/End: Complemental strand, 9129568 - 9129510
Alignment:
Q  804 gggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccat 862  Q
    ||||||||| ||||||||||||||||||| ||||||| ||| |||  ||||||||||||    
T  9129568 gggtggcaaagtgatccaccaaatccatattcatccattccatccgctacaaaatccat 9129510  T

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Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 804 - 862
Target Start/End: Complemental strand, 9137675 - 9137617
Alignment:
Q  804 gggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccat 862  Q
    ||||||||| ||||||||||||||||||| ||||||| ||| |||  ||||||||||||    
T  9137675 gggtggcaaagtgatccaccaaatccatattcatccattccatccgctacaaaatccat 9137617  T

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Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 804 - 858
Target Start/End: Original strand, 34365439 - 34365493
Alignment:
Q  804 gggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaat 858  Q
    |||||||||| |||||||||||||| |||| |||||||||| | || ||||||||    
T  34365439 gggtggcaatttgatccaccaaatctataaccatccaatccattcactacaaaat 34365493  T

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Target: chr6 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 804 - 882
Target Start/End: Original strand, 26857966 - 26858044
Alignment:
Q  804 gggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaa 882  Q
    |||||||||| |||||||  | ||||||| ||||||||||| |||| ||||||||||||| |||||||||| |||||||    
T  26857966 gggtggcaatatgatccatgagatccatattcatccaatccatccactacaaaatccatccaatccatctatcaaacaa 26858044  T

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Target: chr8 (Bit Score: 38; Significance: 0.000000000006; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 525 - 594
Target Start/End: Complemental strand, 7561386 - 7561317
Alignment:
Q  525 tgtttggtttggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagctt 594  Q
    ||||||||||| | ||||||||||||||| ||||| | ||||||| |||||||| ||||| |||||||||    
T  7561386 tgtttggtttgaccgcgggaaagctaaactcacgtctaaaagagctactttcgtgaaaatagaaaagctt 7561317  T

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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 521 - 608
Target Start/End: Original strand, 12768583 - 12768670
Alignment:
Q  521 gacctgtttggtttggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagcttgctttcctagcttt 608  Q
    ||||||||||||||||||||||||||||  ||| |  | || || |||||||||||||  || | || ||||||||||||||||||||    
T  12768583 gacctgtttggtttggcggcgggaaagccgaactcgtggtttaaggagcaactttcgtggaagtagagaagcttgctttcctagcttt 12768670  T

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Target: scaffold0102 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 804 - 882
Target Start/End: Complemental strand, 14463 - 14385
Alignment:
Q  804 gggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaa 882  Q
    |||||||||| |||||||  | |||||||  |||||||||| |||| ||||||||||||| |||||||| | |||||||    
T  14463 gggtggcaatatgatccatgagatccatatccatccaatccatccactacaaaatccatccaatccatccatcaaacaa 14385  T

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Target: chr2 (Bit Score: 35; Significance: 0.0000000004; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 804 - 882
Target Start/End: Original strand, 17893953 - 17894031
Alignment:
Q  804 gggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaa 882  Q
    ||||||||||  |||||| ||||||||||  |||||||||| ||||  | || ||||||| ||||||||||||||||||    
T  17893953 gggtggcaataggatccatcaaatccatatacatccaatccatccaccataatatccatccaatccatctaccaaacaa 17894031  T

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Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 804 - 882
Target Start/End: Original strand, 43323718 - 43323796
Alignment:
Q  804 gggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaa 882  Q
    |||||||||| |||||||  | ||| |||  |||||||||| |||| ||||||||||||| |||||||| | |||||||    
T  43323718 gggtggcaatatgatccatgagatctatatccatccaatccatccactacaaaatccatccaatccatccatcaaacaa 43323796  T

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