View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4424_high_18 (Length: 249)
Name: NF4424_high_18
Description: NF4424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4424_high_18 |
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Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 29728961 - 29728722
Alignment:
| Q |
1 |
aggttcctttgcaaatttggaatcaggcaatgaaccagcaaaatgtcaacagaccaggtaccagtgggagccaagaaaatccagaaaagcattagtcagg |
100 |
Q |
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| T |
29728961 |
aggttcctttgcaaatttggaatcaggcaatgaaccagcaaaatgtcaacagaccaggtaccagtgggagccaagaaaatccagaaaagcattagtcagg |
29728862 |
T |
|
| Q |
101 |
taaaatgccagtggatttttctgattttaattaagtgttactgttttcatatgctacaactcgcagagcaatatggtcacgtttactatataaaagaaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29728861 |
taaaatgccagtggatttttctgattttaattaagtgttactgttttcatatgctacaactcgcagagcaatatggtcacgtttactatataaaagaaac |
29728762 |
T |
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| Q |
201 |
attctattttcaaatccattttggcctaatcttgcctttg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
29728761 |
attctattttcaaatccattttggcctaatcttgcctttg |
29728722 |
T |
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