View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4424_high_4 (Length: 417)
Name: NF4424_high_4
Description: NF4424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4424_high_4 |
 |  |
|
| [»] scaffold0115 (4 HSPs) |
 |  |  |
|
Alignment Details
Target: chr2 (Bit Score: 130; Significance: 3e-67; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 37 - 174
Target Start/End: Complemental strand, 41642849 - 41642712
Alignment:
| Q |
37 |
taccaaaatgttggactcttgcttgagttcaactttaagacctaaacttgcatccaacaaattttcaattttgccaatctcatcaccctagaatgcagac |
136 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
41642849 |
taccaaaatggtggactcttgcttgagttcaactttaagacctaaacttgcatccaacaaattttcaattttgccaatatcatcaccctagaatgcagac |
41642750 |
T |
 |
| Q |
137 |
atttaatactttcaacgtcttcacgtggggttagcatc |
174 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41642749 |
atttaatactttcaacgtcttcacgtggggttagcatc |
41642712 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 288 - 411
Target Start/End: Complemental strand, 36669193 - 36669070
Alignment:
| Q |
288 |
tgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaatttcgtccaaaacgtta |
387 |
Q |
| |
|
||||||| |||||||||||||||||| |||||| ||||| |||| ||| |||||||||| ||||| ||||||||| ||||| | | |||||||||||| |
|
|
| T |
36669193 |
tgaaagtgcacctcgctatcagccacgtccctgaatcaagaaaacaaactaaaaactccctcaatgtctgttctgttagtcaaatgcatccaaaacgtta |
36669094 |
T |
 |
| Q |
388 |
agttgctgttaattgtgatgatgt |
411 |
Q |
| |
|
| ||| | |||| |||||||||| |
|
|
| T |
36669093 |
acttgatattaacggtgatgatgt |
36669070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 388
Target Start/End: Complemental strand, 31622159 - 31622043
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
|||| |||||||| ||||||||| |||||| ||||| |||| |||||| ||||| |||| ||| |||||||||| ||||| |||||| ||| ||||| |
|
|
| T |
31622159 |
cccttatttgggtccctgaaagtgtacctcgttatcaaccacgtccctgaatcaagaaaacaaactaaaaactccctcaatgtttgttccgtttgtcaaa |
31622060 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaa |
388 |
Q |
| |
|
| | ||||||||||||| |
|
|
| T |
31622059 |
tgcatccaaaacgttaa |
31622043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 388
Target Start/End: Complemental strand, 40894925 - 40894809
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
||||||||||| | ||| ||||| ||||||||||||| || |||||| |||||| |||||||| |||||||||||||||| | ||| ||| |||| | |
|
|
| T |
40894925 |
ccctcatttggatccctaaaagtgtacctcgctatcaggtacgtccctggatcaatgaaacgaactaaaaactcccccaatgtcttttccgttagtcatt |
40894826 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaa |
388 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
40894825 |
cacgtccaaaacgttaa |
40894809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 35298563 - 35298639
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccc |
348 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| |||| |||||| ||||| ||||| | ||||||||||| |
|
|
| T |
35298563 |
ccctcatttgggttcctgaaagtgtacctcgctatcaaccacgtccctgaatcaagaaaacgcaaaaaaaactcccc |
35298639 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 399
Target Start/End: Original strand, 4753535 - 4753662
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
||||| ||||||| ||||||||| ||||||||||| | |||||| |||||||||| ||| ||||||||||| ||||| |||| |||| ||||| |
|
|
| T |
4753535 |
ccctcgtttgggtccctgaaagtgtctctcgctatcagaccagtccctggatcaattaaatgaatcaaaaactccctcaatgtatgttttgttagtcaaa |
4753634 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaagttgctgttaa |
399 |
Q |
| |
|
| | ||||||||||||| ||| |||||| |
|
|
| T |
4753635 |
tgcatccaaaacgttaacttggtgttaa |
4753662 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 345
Target Start/End: Original strand, 31620532 - 31620605
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactc |
345 |
Q |
| |
|
|||||||||| || ||||||||| ||||||||||||| || ||| || ||||| ||||||||||||||||| |
|
|
| T |
31620532 |
ccctcatttgagtccctgaaagtgtacctcgctatcagatacgtccttgaatcaagaaaacgaaccaaaaactc |
31620605 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 388
Target Start/End: Complemental strand, 35306163 - 35306047
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
||||||||| ||| ||||||||| |||||||||||| || |||||| ||||| ||||||| ||||||||||| || | | ||||||| |||| | |
|
|
| T |
35306163 |
ccctcatttaggtccctgaaagtgtacctcgctatcaaacatgtccctgaatcaagaaaacgaaaaaaaaactccccgaaagtctcttctgttagtcatt |
35306064 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaa |
388 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
35306063 |
ctcatccaaaacgttaa |
35306047 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 86; Significance: 6e-41; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 272 - 397
Target Start/End: Complemental strand, 3872340 - 3872215
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
||||| ||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||| ||| ||| |||||| |
|
|
| T |
3872340 |
ccctcgtttgggtccctgaaagtgcacctcgctatcagccacgtccctgtatcaattaaacgaaccaaaaactctctcaatggttattccgttagtcaat |
3872241 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaagttgctgtt |
397 |
Q |
| |
|
||||||||||||||||||||| |||| |
|
|
| T |
3872240 |
ttcgtccaaaacgttaagttgttgtt |
3872215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 272 - 411
Target Start/End: Original strand, 3870775 - 3870914
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
|||||| |||||| ||||||| | || |||||||||||||| ||||| ||||||||| |||| |||||||||||||||| ||||||| ||| |||||| |
|
|
| T |
3870775 |
ccctcacttgggtccctgaaaatgcatttcgctatcagccacgtccctagatcaattaagcgaatcaaaaactcccccaatagttgttccgttagtcaat |
3870874 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaagttgctgttaattgtgatgatgt |
411 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
3870875 |
ttcgtccaaaacgttaagttcgtgttaattgtgatgatgt |
3870914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 388
Target Start/End: Original strand, 17863473 - 17863589
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
||||||||||||| ||||||||| |||||||||||||||||||||| || |||||||||| ||||||||||||| |||||| ||||| || ||||| |
|
|
| T |
17863473 |
ccctcatttgggtccctgaaagtgcacctcgctatcagccacatccttggatcaattaaataaaccaaaaactcctccaatgtatgttccgtcagtcaaa |
17863572 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaa |
388 |
Q |
| |
|
| | ||||||||||||| |
|
|
| T |
17863573 |
tgcatccaaaacgttaa |
17863589 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 272 - 411
Target Start/End: Complemental strand, 17864769 - 17864630
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
||||||||||| | | ||||||| || |||||||||||||||||||| | ||||| |||||||||||| ||||||| ||||| | || |||| ||||| |
|
|
| T |
17864769 |
ccctcatttggttccttgaaagtgcatctcgctatcagccacatccccggatcaaataaacgaaccaagaactccctcaatgtctattttgttagtcaaa |
17864670 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaagttgctgttaattgtgatgatgt |
411 |
Q |
| |
|
| | |||||||| |||| ||| ||||||||||| |||||| |
|
|
| T |
17864669 |
tgcatccaaaacattaacttggtgttaattgtgttgatgt |
17864630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 273 - 350
Target Start/End: Original strand, 37241036 - 37241113
Alignment:
| Q |
273 |
cctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactccccca |
350 |
Q |
| |
|
|||| ||||||||||||||||| | ||||||||||| ||| | | || |||||| ||||| |||||||||||||||| |
|
|
| T |
37241036 |
cctcgtttgggttcctgaaagtgtatctcgctatcagtcacgttcttggatcaatgaaacgcaccaaaaactccccca |
37241113 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 326
Target Start/End: Original strand, 5005715 - 5005769
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaa |
326 |
Q |
| |
|
||||||||||||| ||||||||| |||||||||||| |||| |||||| ||||| |
|
|
| T |
5005715 |
ccctcatttgggtccctgaaagtgtacctcgctatcaaccacgtccctgaatcaa |
5005769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 272 - 411
Target Start/End: Complemental strand, 52190423 - 52190284
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
||||||||||||| ||||||||| || |||||||||||||| |||| || |||||||||||||||||||||||||||||||| |||| |||| ||||| |
|
|
| T |
52190423 |
ccctcatttgggtccctgaaagtgcatctcgctatcagccagatccatggatcaattaaacgaaccaaaaactcccccaatgtctgttttgttagtcaaa |
52190324 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaagttgctgttaattgtgatgatgt |
411 |
Q |
| |
|
| | ||||||||||||| ||| |||||| |||| |||||| |
|
|
| T |
52190323 |
tgcatccaaaacgttaacttggtgttaaatgtgctgatgt |
52190284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 388
Target Start/End: Original strand, 52189193 - 52189309
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||| || ||||||||| | ||||| ||||| ||| ||||| |
|
|
| T |
52189193 |
ccctcatttgggtccctgaaagtgcacctcgctatcagccacatccctggatcaattaaacaaatcaaaaactcgctcaatgtatgttccgttagtcaaa |
52189292 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaa |
388 |
Q |
| |
|
| | ||||||||||||| |
|
|
| T |
52189293 |
tgcatccaaaacgttaa |
52189309 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 272 - 399
Target Start/End: Original strand, 30829934 - 30830061
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||| ||||||||| |||||| ||||||||||||||||||||||||| ||||| ||| ||||| |
|
|
| T |
30829934 |
ccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaatgaaacgaaccaaaaactcccccaatgattgtttcgttagtcaaa |
30830033 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaagttgctgttaa |
399 |
Q |
| |
|
| | ||||||||||||| ||| |||||| |
|
|
| T |
30830034 |
tgcatccaaaacgttaacttggtgttaa |
30830061 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 31410664 - 31410590
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcc |
346 |
Q |
| |
|
|||| |||| ||||||||||||| |||||||||||||| ||| | |||| |||||||||||||| |||||||||| |
|
|
| T |
31410664 |
cccttatttaggttcctgaaagtgcacctcgctatcagacacgttcctgaatcaattaaacgaatcaaaaactcc |
31410590 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 31409326 - 31409395
Alignment:
| Q |
278 |
tttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactccc |
347 |
Q |
| |
|
||||||| ||||||||| ||||||||||||| |||| ||| || ||||| |||||||||||||||||||| |
|
|
| T |
31409326 |
tttgggtccctgaaagtgcacctcgctatcaaccacgtccttggatcaaataaacgaaccaaaaactccc |
31409395 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 351
Target Start/End: Complemental strand, 8481000 - 8480923
Alignment:
| Q |
274 |
ctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaa |
351 |
Q |
| |
|
|||||||| || ||||||||| | ||||||||||| ||| |||||| |||||| ||||| ||||||||||||||||| |
|
|
| T |
8481000 |
ctcatttgagtccctgaaagtgtatctcgctatcagtcacgtccctggatcaatgaaacgcaccaaaaactcccccaa |
8480923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 348
Target Start/End: Original strand, 41774653 - 41774727
Alignment:
| Q |
274 |
ctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccc |
348 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||| |||| |||||| ||||| ||||| | ||||||||||| |
|
|
| T |
41774653 |
ctcatttgggtccctgaaagtgtacctcgctatcaaccacgtccctgaatcaagaaaacgcaaaaaaaactcccc |
41774727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 64; Significance: 7e-28; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 272 - 399
Target Start/End: Original strand, 41739629 - 41739756
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||||||||||||||||| ||||| ||| ||||| |
|
|
| T |
41739629 |
ccctcatttgggttcctgaaagtattgctcgctatcaggcacatccctagatcaatgaaacgaaccaaaaactcccccaatgattgtttcgttagtcaaa |
41739728 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaagttgctgttaa |
399 |
Q |
| |
|
| | ||||||||||||| ||| |||||| |
|
|
| T |
41739729 |
tgcatccaaaacgttaacttggtgttaa |
41739756 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 272 - 411
Target Start/End: Complemental strand, 41741082 - 41740941
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgct--atcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtca |
369 |
Q |
| |
|
||||||||||||| ||||||||| ||||| ||| |||||| | |||| | ||||||||||| ||||||||||||||||||| |||||| ||| |||| |
|
|
| T |
41741082 |
ccctcatttgggtccctgaaagttcaccttgctctatcagctgcgtccccggatcaattaaactaaccaaaaactcccccaatatttgttccgttagtca |
41740983 |
T |
 |
| Q |
370 |
atttcgtccaaaacgttaagttgctgttaattgtgatgatgt |
411 |
Q |
| |
|
||||||||||||||| | || ||||| ||||||||||| |
|
|
| T |
41740982 |
tccacgtccaaaacgttaactggccgttaagtgtgatgatgt |
41740941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 347
Target Start/End: Complemental strand, 45292007 - 45291932
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactccc |
347 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||||| |||||||||| ||||| || |||||||||||||||| |
|
|
| T |
45292007 |
ccctcatttgggtccctgaaagtgtacctcgctatcaggcacatccctgaatcaaggaatcgaaccaaaaactccc |
45291932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 388
Target Start/End: Original strand, 42537723 - 42537839
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
|||||| |||||| ||||||||| ||||||||||| ||||||||| |||||| |||||||||||||||||||| |||| | ||| ||| |||| | |
|
|
| T |
42537723 |
ccctcagttgggtccctgaaagtgttgctcgctatcaggtacatccctgaatcaatgaaacgaaccaaaaactccccgaatgtctcttccgtttgtcatt |
42537822 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaa |
388 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
42537823 |
cacgtccaaaacgttaa |
42537839 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 38516627 - 38516702
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactccc |
347 |
Q |
| |
|
||||||||||||| ||||||||| || |||||||||| |||||||||| ||||| || | |||||||||||||| |
|
|
| T |
38516627 |
ccctcatttgggtccctgaaagtgtacatcgctatcagacacatccctggatcaaggaatccaaccaaaaactccc |
38516702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 347
Target Start/End: Complemental strand, 45296132 - 45296057
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactccc |
347 |
Q |
| |
|
||||||||||||| ||| ||||| ||||||||||||| ||||||| || ||||| || |||||||||||||||| |
|
|
| T |
45296132 |
ccctcatttgggtccctaaaagtgtacctcgctatcaggcacatccatggatcaaggaatcgaaccaaaaactccc |
45296057 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 272 - 399
Target Start/End: Original strand, 26529515 - 26529642
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||||| ||| |||||| ||||| |||||||| |||||||||| ||||| |||||||||| ||||| |
|
|
| T |
26529515 |
ccctcatttgggtccctgaaagtgtacctcgctatcagacacgtccctgaatcaagaaaacgaactaaaaactccctcaatgtttgttctgttagtcaaa |
26529614 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaagttgctgttaa |
399 |
Q |
| |
|
| | ||||||||||||| ||| |||||| |
|
|
| T |
26529615 |
tgcatccaaaacgttaacttgatgttaa |
26529642 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 275 - 369
Target Start/End: Original strand, 35062574 - 35062668
Alignment:
| Q |
275 |
tcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtca |
369 |
Q |
| |
|
|||||||||||||| ||||| ||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||| ||| |||| |
|
|
| T |
35062574 |
tcatttgggttcctaaaagttcacctcgttatcaaccacatccctgaatcaattaaactaaccaaaaactcccccaatgtttgttccgttagtca |
35062668 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 274 - 388
Target Start/End: Original strand, 36573971 - 36574085
Alignment:
| Q |
274 |
ctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaattt |
373 |
Q |
| |
|
||||||| ||| ||||||||| |||||||||||| |||| |||||| ||||| |||||||| |||||||||| ||||| ||||| ||| ||||| | |
|
|
| T |
36573971 |
ctcatttaggtccctgaaagtgtacctcgctatcaaccacgtccctgaatcaagaaaacgaactaaaaactccctcaatgtctgttccgttagtcaaatg |
36574070 |
T |
 |
| Q |
374 |
cgtccaaaacgttaa |
388 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
36574071 |
catccaaaacgttaa |
36574085 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 399
Target Start/End: Complemental strand, 35063676 - 35063549
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
||||||||||||| |||||||| ||| ||||||| |||||| || |||||| |||||||||||||||||||||||| ||||| ||| ||||| |
|
|
| T |
35063676 |
ccctcatttgggtctctgaaagtgttgctcactatcaggcacatctctagatcaatgaaacgaaccaaaaactcccccaattattgtttcgttagtcaaa |
35063577 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaagttgctgttaa |
399 |
Q |
| |
|
| | ||||||||||||| ||| |||||| |
|
|
| T |
35063576 |
tgcatccaaaacgttaacttggtgttaa |
35063549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 353
Target Start/End: Complemental strand, 26531144 - 26531063
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatg |
353 |
Q |
| |
|
||||||||| ||| ||||||||| |||||||||| || ||| |||||| ||||| ||||||||||||||||||| ||||| |
|
|
| T |
26531144 |
ccctcattttggtccctgaaagtgtacctcgctattagacacgtccctgaatcaagaaaacgaaccaaaaactccctcaatg |
26531063 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 351
Target Start/End: Complemental strand, 49919753 - 49919676
Alignment:
| Q |
274 |
ctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaa |
351 |
Q |
| |
|
||||||||||| | ||||||| | |||||||||| ||| |||||| |||||| ||||| ||||||||||||||||| |
|
|
| T |
49919753 |
ctcatttgggtccttgaaagtgtgcatcgctatcagtcacttccctggatcaatgaaacgcaccaaaaactcccccaa |
49919676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 411
Target Start/End: Complemental strand, 36575591 - 36575452
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
|||||||||| || ||||||||| ||||||||||||| ||| ||| | ||||| |||||||||||||||| || ||||| ||||| ||| |||| |
|
|
| T |
36575591 |
ccctcatttgagtccctgaaagtgtacctcgctatcagacacgtccttaaatcaagaaaacgaaccaaaaacttcctcaatgtctgttccgttagtcata |
36575492 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaagttgctgttaattgtgatgatgt |
411 |
Q |
| |
|
|||||||||||||| | ||||||| ||| ||||||| |
|
|
| T |
36575491 |
caagtccaaaacgttaaacttctgttaaatgtaatgatgt |
36575452 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 400
Target Start/End: Original strand, 49917398 - 49917523
Alignment:
| Q |
274 |
ctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaattt |
373 |
Q |
| |
|
||||||||||| ||||||||| | |||||||| || ||||||| || ||||||| || |||| |||||||||| | || ||| |||||| ||||| | |
|
|
| T |
49917398 |
ctcatttgggtctctgaaagtatagctcgctat-agtcacatccttggatcaatttaatgaactaaaaactcccgtattgtttgatctgttagtcaaatg |
49917496 |
T |
 |
| Q |
374 |
cgtccaaaacgttaagttgctgttaat |
400 |
Q |
| |
|
| ||||||| ||||| ||| ||||||| |
|
|
| T |
49917497 |
catccaaaatgttaacttgatgttaat |
49917523 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 388
Target Start/End: Original strand, 35967355 - 35967471
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
||||||||||| | ||||||||| ||| ||| |||||||||||||| | ||||||||||| |||||||||||||||||||| |||||| ||| ||||| |
|
|
| T |
35967355 |
ccctcatttggatccctgaaagttcacatcgttatcagccacatcctcgaatcaattaaactaaccaaaaactcccccaatgtttgttccgttagtcaac |
35967454 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaa |
388 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
35967455 |
cacgtccaaaacattaa |
35967471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 272 - 399
Target Start/End: Original strand, 38921462 - 38921589
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
||||||||||||| ||||||||| ||| ||||||| ||||||||| |||||| ||| ||||||||||||||||||||| ||||| ||| ||||| |
|
|
| T |
38921462 |
ccctcatttgggtccctgaaagtgttgctcactatcaggcacatccctagatcaatgaaatgaaccaaaaactcccccaatgattgtttcgttagtcaaa |
38921561 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaagttgctgttaa |
399 |
Q |
| |
|
| | ||||||||||||| ||| |||||| |
|
|
| T |
38921562 |
tgcatccaaaacgttaacttggtgttaa |
38921589 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 399
Target Start/End: Original strand, 16727819 - 16727946
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||||||||| | |||| ||||| |||||||| ||||||| || ||||| ||||| ||| ||||| |
|
|
| T |
16727819 |
ccctcatttgggtcgctgaaagtgtacctcgctatcagccacgttcctgaatcaagaaaacgaactaaaaacttcctcaatgtctgttccgttagtcaaa |
16727918 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaagttgctgttaa |
399 |
Q |
| |
|
| | |||||||| |||| ||| |||||| |
|
|
| T |
16727919 |
tgcatccaaaacattaacttgatgttaa |
16727946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 399
Target Start/End: Complemental strand, 35968722 - 35968623
Alignment:
| Q |
300 |
tcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaatttcgtccaaaacgttaagttgctgttaa |
399 |
Q |
| |
|
|||||||||| ||||| | | |||||| |||||||||||||||||||||||| ||||| |||| ||||| | | ||||||||||||| ||| |||||| |
|
|
| T |
35968722 |
tcgctatcaggcacattcatagatcaatgaaacgaaccaaaaactcccccaattattgttttgttagtcaaatgcatccaaaacgttaacttggtgttaa |
35968623 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 388
Target Start/End: Original strand, 9099567 - 9099683
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
||||||||||||| ||| ||||| |||||||||||| |||||||||| |||||| ||||||||||||||||| ||||| | |||| ||| ||||| |
|
|
| T |
9099567 |
ccctcatttgggtcccttaaagtgtacctcgctatcaagcacatccctgaatcaatgaaacgaaccaaaaactctttcaatgttggttccgttagtcaaa |
9099666 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaa |
388 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
9099667 |
taagtccaaaacgttaa |
9099683 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 272 - 350
Target Start/End: Original strand, 19801793 - 19801871
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactccccca |
350 |
Q |
| |
|
|||||||| ||| ||||||||| |||||||||||||| || ||| | ||||||||||||||||||||||||||||| |
|
|
| T |
19801793 |
ccctcattccggtccctgaaagtgtacctcgctatcagctacgtccttagatcaattaaacgaaccaaaaactccccca |
19801871 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 388
Target Start/End: Original strand, 20997640 - 20997756
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
||||||||||||| ||||||| | |||||||||||| |||||||| | |||||| |||| ||||||||||||| ||||| | ||| ||| ||||| |
|
|
| T |
20997640 |
ccctcatttgggtccctgaaaatgtacctcgctatcaagcacatcccaggatcaataaaacaaaccaaaaactccttcaatgttggtttcgttagtcaaa |
20997739 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaa |
388 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
20997740 |
taagtccaaaacgttaa |
20997756 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 11137944 - 11138000
Alignment:
| Q |
297 |
acctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatg |
353 |
Q |
| |
|
||||||||||||| |||||||||| |||| ||||||||||||||||||| ||||| |
|
|
| T |
11137944 |
acctcgctatcagacacatccctggatcatgaaaacgaaccaaaaactccctcaatg |
11138000 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 36163393 - 36163517
Alignment:
| Q |
275 |
tcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaatttc |
374 |
Q |
| |
|
|||||||| | ||||||||| |||||||||||| | |||||| ||||||| || ||| ||||||||||||||||| ||| |||| ||||| | | |
|
|
| T |
36163393 |
tcatttggatccctgaaagtgtccctcgctatcagaccaatccctcaatcaatttaatgaatcaaaaactcccccaatgtacgttatgttagtcaaatgc |
36163492 |
T |
 |
| Q |
375 |
gtccaaaacgttaagttgctgttaa |
399 |
Q |
| |
|
||||||||||||| ||| |||||| |
|
|
| T |
36163493 |
atccaaaacgttaacttggtgttaa |
36163517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 388
Target Start/End: Complemental strand, 37465042 - 37464926
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
|||| |||||||| ||||||||| ||||||||||| |||||||| |||||| |||| |||||||||||||| |||| | ||| ||| |||| | |
|
|
| T |
37465042 |
ccctaatttgggtccctgaaagtgttgctcgctatcaggtacatccctagatcaatgaaacaaaccaaaaactccctgaatgtctcttccgtttgtcatt |
37464943 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaa |
388 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
37464942 |
cacgtccaaaacgttaa |
37464926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 44; Significance: 6e-16; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 347
Target Start/End: Complemental strand, 9448820 - 9448745
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactccc |
347 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||||| |||||||||| ||||| || |||||||||||||||| |
|
|
| T |
9448820 |
ccctcatttgggtccctgaaagtgtacctcgctatcagacacatccctggatcaaggaatcgaaccaaaaactccc |
9448745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 411
Target Start/End: Original strand, 18191753 - 18191892
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaatggttgttctgttggtcaat |
371 |
Q |
| |
|
||||||||||||| ||||||||| || ||||||||| | ||||| ||||||| || ||| ||||||||||||||||| |||| |||| ||||| |
|
|
| T |
18191753 |
ccctcatttgggtccctgaaagtgtcccacgctatcagaccagtccctcaatcaatttaatgaatcaaaaactcccccaatgtatgttatgttagtcaaa |
18191852 |
T |
 |
| Q |
372 |
ttcgtccaaaacgttaagttgctgttaattgtgatgatgt |
411 |
Q |
| |
|
| | ||||||||||||| ||| | ||||| ||| |||||| |
|
|
| T |
18191853 |
tgcatccaaaacgttaacttggtattaatggtgctgatgt |
18191892 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 338 - 411
Target Start/End: Complemental strand, 18192993 - 18192920
Alignment:
| Q |
338 |
aaaaactcccccaatggttgttctgttggtcaatttcgtccaaaacgttaagttgctgttaattgtgatgatgt |
411 |
Q |
| |
|
|||||||||| ||||| | |||||||| |||||||| ||||||||||||| ||| |||||| | ||||||||| |
|
|
| T |
18192993 |
aaaaactccctcaatgttagttctgttagtcaatttaatccaaaacgttaacttggtgttaagtctgatgatgt |
18192920 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0115 (Bit Score: 36; Significance: 0.00000000004; HSPs: 4)
Name: scaffold0115
Description:
Target: scaffold0115; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 351
Target Start/End: Complemental strand, 6134 - 6055
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaa |
351 |
Q |
| |
|
|||||||||| || ||||||||| ||||||||||||||| | ||||| || ||| ||||| ||||||||||||||||| |
|
|
| T |
6134 |
ccctcatttgagtccctgaaagtgtacctcgctatcagccccgtccctagattaatgaaacgcaccaaaaactcccccaa |
6055 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0115; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 351
Target Start/End: Complemental strand, 13874 - 13795
Alignment:
| Q |
272 |
ccctcatttgggttcctgaaagtacacctcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaa |
351 |
Q |
| |
|
|||||||||| || ||||||||| ||||||||||||||| | ||||| || ||| ||||| ||||||||||||||||| |
|
|
| T |
13874 |
ccctcatttgagtccctgaaagtgtacctcgctatcagccccgtccctagattaatgaaacgcaccaaaaactcccccaa |
13795 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0115; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 300 - 351
Target Start/End: Original strand, 4371 - 4422
Alignment:
| Q |
300 |
tcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaa |
351 |
Q |
| |
|
|||||||||||||| ||||| |||||| ||||| ||||||||||||||||| |
|
|
| T |
4371 |
tcgctatcagccacgtccctagatcaatgaaacgcaccaaaaactcccccaa |
4422 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0115; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 300 - 351
Target Start/End: Original strand, 12111 - 12162
Alignment:
| Q |
300 |
tcgctatcagccacatccctgtatcaattaaacgaaccaaaaactcccccaa |
351 |
Q |
| |
|
|||||||||||||| ||||| |||||| ||||| ||||||||||||||||| |
|
|
| T |
12111 |
tcgctatcagccacgtccctagatcaatgaaacgcaccaaaaactcccccaa |
12162 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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