View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4426-Insertion-3 (Length: 667)

Name: NF4426-Insertion-3
Description: NF4426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4426-Insertion-3
NF4426-Insertion-3
[»] chr4 (82 HSPs)
chr4 (8-378)||(44145477-44145844)
chr4 (413-666)||(44145842-44146095)
chr4 (8-307)||(44156199-44156495)
chr4 (305-539)||(17182490-17182731)
chr4 (309-538)||(55080581-55080815)
chr4 (305-533)||(22186717-22186950)
chr4 (307-536)||(56135749-56135965)
chr4 (307-511)||(7977530-7977741)
chr4 (346-536)||(43961449-43961644)
chr4 (307-511)||(37761465-37761673)
chr4 (309-511)||(47846090-47846298)
chr4 (303-511)||(54576362-54576577)
chr4 (307-491)||(29993826-29994015)
chr4 (342-491)||(4437480-4437633)
chr4 (305-491)||(5824899-5825085)
chr4 (307-490)||(51329796-51329983)
chr4 (307-507)||(21694929-21695132)
chr4 (307-396)||(49735468-49735557)
chr4 (366-490)||(54001162-54001289)
chr4 (309-500)||(34995052-34995247)
chr4 (590-666)||(44155976-44156052)
chr4 (307-400)||(54935067-54935161)
chr4 (304-373)||(46007879-46007948)
chr4 (364-477)||(9030272-9030391)
chr4 (305-400)||(35543448-35543543)
chr4 (304-520)||(47433734-47433956)
chr4 (305-376)||(54320609-54320680)
chr4 (311-471)||(55510173-55510338)
chr4 (307-372)||(31348500-31348565)
chr4 (310-418)||(51074344-51074459)
chr4 (309-390)||(54576329-54576410)
chr4 (303-376)||(54935244-54935317)
chr4 (309-397)||(47846417-47846505)
chr4 (305-352)||(49735691-49735738)
chr4 (307-428)||(29798288-29798410)
chr4 (305-369)||(16400798-16400862)
chr4 (311-438)||(27735749-27735881)
chr4 (305-389)||(37711285-37711369)
chr4 (405-539)||(11089619-11089756)
chr4 (323-390)||(21694906-21694973)
chr4 (309-396)||(27735900-27735987)
chr4 (303-374)||(37761641-37761712)
chr4 (397-475)||(14539367-14539445)
chr4 (305-375)||(26166935-26167005)
chr4 (307-376)||(1968534-1968603)
chr4 (307-376)||(6938422-6938491)
chr4 (307-489)||(17938164-17938352)
chr4 (307-352)||(37711138-37711183)
chr4 (310-390)||(29993774-29993854)
chr4 (304-376)||(34995224-34995296)
chr4 (305-361)||(35565556-35565612)
chr4 (530-590)||(44156147-44156207)
chr4 (305-437)||(45132610-45132741)
chr4 (305-376)||(45741888-45741959)
chr4 (309-375)||(2247977-2248043)
chr4 (307-349)||(41174547-41174589)
chr4 (423-473)||(51075218-51075268)
chr4 (342-436)||(41227518-41227614)
chr4 (307-348)||(53260718-53260759)
chr4 (310-350)||(5731032-5731072)
chr4 (307-347)||(54320435-54320475)
chr4 (305-339)||(41174354-41174388)
chr4 (304-341)||(27775580-27775617)
chr4 (312-349)||(34110803-34110840)
chr4 (307-376)||(45742065-45742134)
chr4 (310-374)||(4437428-4437492)
chr4 (305-376)||(31348314-31348390)
chr4 (305-361)||(47694347-47694403)
chr4 (305-352)||(5730828-5730875)
chr4 (305-339)||(4437626-4437660)
chr4 (332-389)||(7977520-7977578)
chr4 (442-520)||(35543333-35543411)
chr4 (305-339)||(56135933-56135967)
chr4 (297-374)||(23332709-23332786)
chr4 (307-376)||(24565346-24565415)
chr4 (305-361)||(1968349-1968405)
chr4 (307-375)||(5825072-5825140)
chr4 (454-530)||(11842325-11842401)
chr4 (305-337)||(22920979-22921011)
chr4 (305-337)||(22970788-22970820)
chr4 (347-391)||(32192847-32192891)
chr4 (323-351)||(49735667-49735695)
[»] chr8 (60 HSPs)
chr8 (307-511)||(12022178-12022387)
chr8 (342-539)||(39449339-39449546)
chr8 (307-500)||(8815187-8815385)
chr8 (307-511)||(43732679-43732896)
chr8 (305-511)||(30365128-30365339)
chr8 (304-489)||(16024150-16024341)
chr8 (310-536)||(20472702-20472933)
chr8 (307-515)||(9933240-9933454)
chr8 (308-470)||(43826333-43826500)
chr8 (315-508)||(34196316-34196514)
chr8 (305-489)||(8671849-8672040)
chr8 (307-468)||(9434377-9434543)
chr8 (307-476)||(40633059-40633232)
chr8 (310-474)||(6453185-6453356)
chr8 (311-397)||(7394615-7394701)
chr8 (305-390)||(43732848-43732933)
chr8 (301-390)||(12022136-12022226)
chr8 (303-476)||(29937508-29937676)
chr8 (305-374)||(31543249-31543318)
chr8 (307-376)||(1027023-1027092)
chr8 (301-390)||(8815135-8815224)
chr8 (305-376)||(2248450-2248521)
chr8 (307-379)||(9718651-9718723)
chr8 (313-376)||(1281149-1281212)
chr8 (313-400)||(36308994-36309081)
chr8 (300-374)||(7503131-7503205)
chr8 (307-376)||(31543072-31543141)
chr8 (302-367)||(34196492-34196556)
chr8 (305-362)||(40632994-40633051)
chr8 (307-375)||(30365306-30365374)
chr8 (305-376)||(7979138-7979209)
chr8 (302-347)||(2481977-2482022)
chr8 (307-372)||(13404976-13405041)
chr8 (331-376)||(30581988-30582033)
chr8 (307-376)||(34634318-34634387)
chr8 (307-352)||(41103504-41103549)
chr8 (305-372)||(11033417-11033482)
chr8 (311-375)||(11575582-11575646)
chr8 (310-390)||(16024315-16024394)
chr8 (305-389)||(31738585-31738669)
chr8 (305-344)||(3726861-3726900)
chr8 (307-346)||(4247725-4247764)
chr8 (310-476)||(24243118-24243287)
chr8 (303-345)||(33922521-33922563)
chr8 (303-352)||(11785725-11785774)
chr8 (309-346)||(28083744-28083781)
chr8 (311-396)||(30479721-30479806)
chr8 (304-375)||(2412961-2413027)
chr8 (307-342)||(6315066-6315101)
chr8 (305-376)||(10028298-10028369)
chr8 (302-376)||(10028105-10028179)
chr8 (309-371)||(30479897-30479959)
chr8 (305-335)||(37032596-37032626)
chr8 (302-339)||(36308847-36308884)
chr8 (399-460)||(38198135-38198196)
chr8 (307-376)||(40990359-40990427)
chr8 (307-339)||(7502964-7502996)
chr8 (307-339)||(9718489-9718521)
chr8 (307-343)||(16652958-16652994)
chr8 (399-443)||(27487087-27487131)
[»] chr5 (67 HSPs)
chr5 (307-511)||(10204576-10204785)
chr5 (307-511)||(15986659-15986868)
chr5 (307-536)||(40305670-40305909)
chr5 (309-536)||(8551427-8551660)
chr5 (307-511)||(33744228-33744437)
chr5 (309-511)||(34980812-34981019)
chr5 (307-511)||(10043252-10043461)
chr5 (305-490)||(21580945-21581135)
chr5 (342-461)||(5688448-5688572)
chr5 (302-396)||(14245083-14245177)
chr5 (308-380)||(13634882-13634954)
chr5 (307-376)||(7544136-7544205)
chr5 (307-372)||(13634711-13634776)
chr5 (302-391)||(14245206-14245295)
chr5 (309-396)||(1657968-1658055)
chr5 (397-500)||(6382422-6382525)
chr5 (307-471)||(11436939-11437108)
chr5 (303-389)||(15858902-15858988)
chr5 (307-376)||(26414893-26414962)
chr5 (305-377)||(10476202-10476274)
chr5 (311-370)||(2550533-2550592)
chr5 (306-397)||(14684638-14684729)
chr5 (305-352)||(16938477-16938524)
chr5 (302-396)||(15986619-15986713)
chr5 (302-351)||(5688590-5688639)
chr5 (312-396)||(36363187-36363271)
chr5 (349-491)||(6597845-6597984)
chr5 (304-375)||(10204752-10204823)
chr5 (303-374)||(34980987-34981058)
chr5 (399-500)||(10043055-10043156)
chr5 (305-374)||(33744191-33744260)
chr5 (314-378)||(10043425-10043489)
chr5 (307-371)||(10476026-10476090)
chr5 (307-347)||(20147074-20147114)
chr5 (304-347)||(40305667-40305710)
chr5 (305-438)||(4373674-4373812)
chr5 (305-379)||(11756876-11756949)
chr5 (307-389)||(12035936-12036018)
chr5 (397-475)||(12036007-12036084)
chr5 (305-396)||(11437094-11437188)
chr5 (309-376)||(16501966-16502034)
chr5 (300-489)||(28279533-28279728)
chr5 (307-375)||(40815297-40815365)
chr5 (304-368)||(42681445-42681509)
chr5 (309-352)||(7544335-7544378)
chr5 (310-352)||(11757102-11757144)
chr5 (310-348)||(21581150-21581188)
chr5 (309-351)||(22022849-22022891)
chr5 (307-376)||(8502835-8502904)
chr5 (301-342)||(8503038-8503079)
chr5 (311-384)||(12036105-12036177)
chr5 (307-352)||(16938678-16938723)
chr5 (353-389)||(6382357-6382393)
chr5 (307-339)||(9856890-9856922)
chr5 (310-342)||(14681473-14681505)
chr5 (303-339)||(22023571-22023607)
chr5 (305-376)||(10650589-10650660)
chr5 (304-371)||(37551585-37551652)
chr5 (304-371)||(37654415-37654482)
chr5 (305-391)||(2183974-2184060)
chr5 (312-350)||(36363037-36363075)
chr5 (307-341)||(36392359-36392393)
chr5 (307-376)||(20513612-20513681)
chr5 (304-345)||(37607100-37607141)
chr5 (304-345)||(37779309-37779350)
chr5 (310-350)||(12600703-12600743)
chr5 (304-336)||(13298477-13298509)
[»] chr7 (68 HSPs)
chr7 (307-511)||(33519048-33519257)
chr7 (301-476)||(37925835-37926015)
chr7 (307-511)||(36267588-36267797)
chr7 (305-520)||(39646467-39646687)
chr7 (305-491)||(28074158-28074354)
chr7 (324-539)||(48013520-48013740)
chr7 (304-511)||(37620771-37620983)
chr7 (310-506)||(35421967-35422168)
chr7 (310-516)||(21857350-21857560)
chr7 (310-511)||(31364080-31364285)
chr7 (307-511)||(48881593-48881793)
chr7 (308-454)||(12670928-12671079)
chr7 (305-482)||(8122142-8122328)
chr7 (308-421)||(12682854-12682972)
chr7 (309-474)||(16833684-16833867)
chr7 (303-376)||(36267549-36267622)
chr7 (307-376)||(39856040-39856109)
chr7 (326-489)||(48015229-48015394)
chr7 (305-389)||(48881556-48881640)
chr7 (398-536)||(23116269-23116408)
chr7 (307-390)||(28074103-28074186)
chr7 (363-472)||(3215934-3216048)
chr7 (304-375)||(33519224-33519295)
chr7 (305-400)||(47390853-47390948)
chr7 (353-491)||(3143526-3143673)
chr7 (302-400)||(18795746-18795843)
chr7 (307-379)||(1051670-1051742)
chr7 (308-376)||(31571645-31571713)
chr7 (299-382)||(41496949-41497032)
chr7 (305-438)||(33655216-33655354)
chr7 (307-400)||(13771097-13771190)
chr7 (307-375)||(4833531-4833599)
chr7 (305-389)||(13770946-13771030)
chr7 (411-507)||(30592292-30592388)
chr7 (302-373)||(40282192-40282263)
chr7 (305-351)||(25887190-25887236)
chr7 (305-391)||(40196530-40196616)
chr7 (307-376)||(4835479-4835548)
chr7 (307-380)||(18231757-18231830)
chr7 (307-375)||(30592253-30592321)
chr7 (301-376)||(34228494-34228569)
chr7 (320-387)||(48147404-48147471)
chr7 (397-500)||(2087785-2087892)
chr7 (309-390)||(37926002-37926083)
chr7 (303-376)||(43230232-43230305)
chr7 (307-350)||(47391057-47391100)
chr7 (305-367)||(31553183-31553243)
chr7 (310-376)||(42306505-42306571)
chr7 (397-538)||(17852966-17853106)
chr7 (307-375)||(13425120-13425188)
chr7 (309-361)||(23116418-23116470)
chr7 (307-339)||(37417835-37417867)
chr7 (307-375)||(48015383-48015451)
chr7 (296-339)||(17852870-17852913)
chr7 (307-378)||(25887366-25887436)
chr7 (305-375)||(26365765-26365836)
chr7 (336-438)||(41497065-41497172)
chr7 (332-390)||(31364070-31364128)
chr7 (309-351)||(47230019-47230061)
chr7 (313-374)||(37620951-37621012)
chr7 (305-334)||(38749576-38749605)
chr7 (313-350)||(41008188-41008225)
chr7 (305-342)||(41008387-41008424)
chr7 (307-339)||(17853072-17853104)
chr7 (309-337)||(24970379-24970407)
chr7 (317-389)||(35422126-35422198)
chr7 (342-390)||(39646630-39646678)
chr7 (311-339)||(39646671-39646699)
[»] scaffold0095 (1 HSPs)
scaffold0095 (342-539)||(8182-8390)
[»] chr1 (56 HSPs)
chr1 (305-511)||(1085524-1085736)
chr1 (303-534)||(33643264-33643499)
chr1 (307-491)||(35927814-35928001)
chr1 (310-511)||(40709327-40709532)
chr1 (305-515)||(525133-525346)
chr1 (335-539)||(47071079-47071288)
chr1 (356-510)||(25268313-25268472)
chr1 (307-390)||(51303384-51303467)
chr1 (344-491)||(2506576-2506728)
chr1 (337-469)||(51303461-51303600)
chr1 (315-476)||(13386989-13387163)
chr1 (350-537)||(1344592-1344783)
chr1 (315-400)||(23536839-23536924)
chr1 (414-511)||(35512909-35513006)
chr1 (304-476)||(20607220-20607390)
chr1 (307-459)||(17622536-17622694)
chr1 (311-374)||(35512974-35513037)
chr1 (305-396)||(38509892-38509983)
chr1 (307-376)||(12234010-12234079)
chr1 (304-428)||(30010329-30010458)
chr1 (301-376)||(40094927-40095002)
chr1 (314-376)||(2859107-2859169)
chr1 (342-476)||(40287325-40287467)
chr1 (307-379)||(41498404-41498476)
chr1 (305-376)||(35349637-35349708)
chr1 (307-352)||(26324014-26324059)
chr1 (305-378)||(40709290-40709363)
chr1 (315-454)||(50079476-50079620)
chr1 (309-376)||(12234185-12234252)
chr1 (305-376)||(32951493-32951564)
chr1 (310-376)||(38510069-38510135)
chr1 (306-375)||(2858931-2859000)
chr1 (307-352)||(20607416-20607461)
chr1 (307-376)||(30010507-30010576)
chr1 (353-461)||(52707691-52707803)
chr1 (301-376)||(1085483-1085559)
chr1 (305-376)||(7444476-7444547)
chr1 (304-350)||(20576130-20576176)
chr1 (304-342)||(26941042-26941080)
chr1 (311-427)||(51597672-51597793)
chr1 (305-397)||(2470728-2470820)
chr1 (305-376)||(41498579-41498651)
chr1 (311-371)||(35512638-35512694)
chr1 (302-438)||(40095041-40095183)
chr1 (304-375)||(49832544-49832615)
chr1 (305-375)||(35927988-35928058)
chr1 (315-376)||(10391880-10391941)
chr1 (315-376)||(25268439-25268500)
chr1 (305-339)||(8529807-8529841)
chr1 (305-375)||(28770897-28770967)
chr1 (307-376)||(35349466-35349533)
chr1 (310-342)||(2470934-2470966)
chr1 (305-397)||(41676435-41676522)
chr1 (397-457)||(44210994-44211054)
chr1 (311-371)||(49946768-49946828)
chr1 (309-389)||(52428068-52428147)
[»] chr6 (51 HSPs)
chr6 (305-476)||(15353362-15353537)
chr6 (305-476)||(15323223-15323399)
chr6 (307-490)||(9051590-9051776)
chr6 (303-509)||(31798914-31799128)
chr6 (305-511)||(10293248-10293457)
chr6 (307-421)||(23090995-23091114)
chr6 (347-472)||(26318345-26318475)
chr6 (307-476)||(4097305-4097480)
chr6 (305-438)||(4097620-4097759)
chr6 (301-376)||(14515467-14515542)
chr6 (307-511)||(10818229-10818425)
chr6 (303-491)||(25468454-25468639)
chr6 (307-374)||(30487306-30487373)
chr6 (397-500)||(3841180-3841284)
chr6 (304-374)||(12811157-12811227)
chr6 (406-476)||(15373669-15373739)
chr6 (307-376)||(9721138-9721207)
chr6 (308-401)||(10818366-10818459)
chr6 (314-391)||(34177060-34177137)
chr6 (310-376)||(9719034-9719100)
chr6 (310-376)||(19278213-19278278)
chr6 (315-376)||(23091133-23091195)
chr6 (310-376)||(30487480-30487546)
chr6 (307-396)||(665841-665929)
chr6 (302-371)||(31849105-31849174)
chr6 (406-511)||(34176606-34176711)
chr6 (301-389)||(4097229-4097317)
chr6 (308-404)||(9719178-9719273)
chr6 (352-391)||(15373737-15373776)
chr6 (301-339)||(1300623-1300661)
chr6 (303-389)||(14515633-14515719)
chr6 (303-376)||(9051530-9051603)
chr6 (304-352)||(9298690-9298738)
chr6 (307-375)||(16738172-16738239)
chr6 (398-438)||(28477076-28477116)
chr6 (398-438)||(29692974-29693014)
chr6 (322-378)||(34176586-34176642)
chr6 (358-401)||(5287471-5287514)
chr6 (310-400)||(30850063-30850153)
chr6 (303-404)||(9721285-9721385)
chr6 (315-375)||(10293424-10293484)
chr6 (305-341)||(21607054-21607090)
chr6 (310-374)||(26318482-26318546)
chr6 (307-382)||(1300789-1300864)
chr6 (307-390)||(3841247-3841330)
chr6 (310-380)||(5585304-5585375)
chr6 (312-375)||(19278039-19278102)
chr6 (305-376)||(33235949-33236020)
chr6 (342-396)||(31849265-31849319)
chr6 (307-339)||(21606854-21606886)
chr6 (310-350)||(33041473-33041513)
[»] chr2 (65 HSPs)
chr2 (307-490)||(31061359-31061547)
chr2 (307-491)||(45257307-45257496)
chr2 (305-500)||(42296349-42296549)
chr2 (315-469)||(33265615-33265773)
chr2 (309-472)||(3094427-3094595)
chr2 (307-473)||(2381060-2381231)
chr2 (308-490)||(1052811-1053000)
chr2 (314-469)||(31928121-31928286)
chr2 (307-476)||(34187575-34187751)
chr2 (341-476)||(15085770-15085911)
chr2 (307-429)||(1270394-1270522)
chr2 (311-489)||(35325271-35325456)
chr2 (356-488)||(45098218-45098355)
chr2 (304-421)||(17333936-17334059)
chr2 (305-376)||(22356179-22356250)
chr2 (307-396)||(23748250-23748339)
chr2 (403-515)||(36052118-36052230)
chr2 (305-372)||(35736173-35736240)
chr2 (305-376)||(36347716-36347787)
chr2 (307-373)||(35736365-35736431)
chr2 (303-352)||(17379842-17379891)
chr2 (307-431)||(41778773-41778902)
chr2 (307-438)||(15224802-15224938)
chr2 (307-390)||(42813781-42813864)
chr2 (309-438)||(16713494-16713628)
chr2 (399-476)||(8554369-8554446)
chr2 (358-430)||(22356016-22356093)
chr2 (307-437)||(886919-887051)
chr2 (304-376)||(887285-887356)
chr2 (398-503)||(9313079-9313188)
chr2 (342-473)||(21502067-21502204)
chr2 (302-420)||(23739882-23740005)
chr2 (309-376)||(36046377-36046443)
chr2 (302-371)||(2380987-2381057)
chr2 (408-510)||(42813726-42813828)
chr2 (305-376)||(45257482-45257553)
chr2 (307-349)||(17380043-17380085)
chr2 (310-376)||(31795772-31795838)
chr2 (307-376)||(9631735-9631804)
chr2 (303-352)||(40022359-40022407)
chr2 (312-371)||(8427051-8427110)
chr2 (342-401)||(14196819-14196878)
chr2 (313-368)||(31061543-31061598)
chr2 (309-375)||(9426987-9427053)
chr2 (304-350)||(15224142-15224188)
chr2 (305-347)||(31795968-31796010)
chr2 (344-390)||(33265767-33265813)
chr2 (309-375)||(41841684-41841750)
chr2 (309-374)||(8426881-8426946)
chr2 (307-376)||(36347541-36347610)
chr2 (308-376)||(36046205-36046273)
chr2 (309-376)||(2241413-2241479)
chr2 (305-356)||(8554446-8554497)
chr2 (310-345)||(12541773-12541808)
chr2 (307-370)||(17331415-17331478)
chr2 (309-400)||(40022524-40022615)
chr2 (305-339)||(23748103-23748137)
chr2 (397-511)||(31795804-31795918)
chr2 (310-340)||(36567063-36567093)
chr2 (304-337)||(9427200-9427233)
chr2 (305-346)||(16713730-16713771)
chr2 (310-347)||(19567020-19567057)
chr2 (453-509)||(14187111-14187167)
chr2 (305-431)||(21662324-21662456)
chr2 (440-472)||(22356141-22356173)
[»] chr3 (71 HSPs)
chr3 (307-536)||(41414078-41414313)
chr3 (346-535)||(40858604-40858798)
chr3 (313-509)||(16884010-16884209)
chr3 (305-511)||(34641000-34641199)
chr3 (313-491)||(10943669-10943852)
chr3 (311-491)||(17474261-17474446)
chr3 (310-488)||(21090129-21090312)
chr3 (342-536)||(48683647-48683848)
chr3 (307-469)||(44412361-44412528)
chr3 (307-491)||(24253721-24253911)
chr3 (309-520)||(42772046-42772250)
chr3 (312-511)||(26135807-26136006)
chr3 (319-507)||(18086019-18086218)
chr3 (300-461)||(27197734-27197900)
chr3 (309-390)||(44412522-44412603)
chr3 (348-510)||(8432297-8432462)
chr3 (342-469)||(46978462-46978594)
chr3 (342-489)||(42699669-42699821)
chr3 (307-390)||(34641151-34641234)
chr3 (305-376)||(28582684-28582755)
chr3 (307-400)||(24560217-24560310)
chr3 (305-387)||(5961933-5962014)
chr3 (305-390)||(24253883-24253968)
chr3 (305-400)||(220548-220643)
chr3 (302-375)||(24560393-24560466)
chr3 (372-475)||(36727242-36727349)
chr3 (311-376)||(55428554-55428619)
chr3 (309-389)||(26135959-26136039)
chr3 (301-536)||(30200098-30200345)
chr3 (313-374)||(27541937-27541998)
chr3 (305-342)||(37102348-37102385)
chr3 (307-376)||(41110496-41110565)
chr3 (303-344)||(54574563-54574604)
chr3 (313-543)||(54985696-54985943)
chr3 (310-350)||(18654802-18654842)
chr3 (301-376)||(21773776-21773851)
chr3 (309-376)||(41110323-41110390)
chr3 (301-376)||(52474090-52474165)
chr3 (307-361)||(5903549-5903603)
chr3 (301-347)||(9312470-9312516)
chr3 (304-350)||(36568901-36568947)
chr3 (310-375)||(6803377-6803442)
chr3 (307-352)||(25655171-25655216)
chr3 (310-375)||(28581189-28581254)
chr3 (415-476)||(55428492-55428553)
chr3 (307-343)||(651740-651776)
chr3 (307-367)||(8432261-8432321)
chr3 (307-347)||(9312673-9312713)
chr3 (300-372)||(25499074-25499146)
chr3 (328-380)||(25654991-25655043)
chr3 (303-339)||(30200094-30200130)
chr3 (311-347)||(31664391-31664427)
chr3 (311-347)||(31931969-31932005)
chr3 (452-540)||(37102155-37102243)
chr3 (298-342)||(42772231-42772275)
chr3 (312-375)||(14897981-14898044)
chr3 (305-352)||(18654598-18654645)
chr3 (309-376)||(23028101-23028168)
chr3 (305-431)||(46204884-46205015)
chr3 (311-345)||(10748299-10748333)
chr3 (305-339)||(48683816-48683850)
chr3 (305-346)||(16275900-16275941)
chr3 (307-339)||(2387962-2387994)
chr3 (311-351)||(12790377-12790417)
chr3 (309-345)||(14897897-14897933)
chr3 (307-375)||(16883974-16884041)
chr3 (301-345)||(27197677-27197721)
chr3 (307-339)||(37102159-37102191)
chr3 (305-341)||(41039948-41039984)
chr3 (303-339)||(42699814-42699850)
chr3 (312-376)||(52473920-52473984)
[»] scaffold0026 (3 HSPs)
scaffold0026 (307-476)||(1467-1642)
scaffold0026 (310-391)||(1175-1256)
scaffold0026 (299-371)||(1390-1461)
[»] scaffold0119 (2 HSPs)
scaffold0119 (307-491)||(37383-37572)
scaffold0119 (307-429)||(30715-30843)
[»] scaffold0071 (1 HSPs)
scaffold0071 (305-541)||(52894-53122)
[»] scaffold0012 (2 HSPs)
scaffold0012 (304-491)||(184608-184796)
scaffold0012 (311-374)||(184784-184847)
[»] scaffold0007 (2 HSPs)
scaffold0007 (397-511)||(242311-242425)
scaffold0007 (306-390)||(242377-242461)
[»] scaffold0067 (2 HSPs)
scaffold0067 (307-400)||(39341-39434)
scaffold0067 (305-376)||(39184-39256)
[»] scaffold1414 (1 HSPs)
scaffold1414 (362-473)||(355-473)
[»] scaffold0096 (1 HSPs)
scaffold0096 (305-375)||(6582-6652)
[»] scaffold0198 (1 HSPs)
scaffold0198 (310-375)||(3150-3215)
[»] scaffold0240 (2 HSPs)
scaffold0240 (402-491)||(17640-17729)
scaffold0240 (301-375)||(17716-17788)
[»] scaffold0262 (1 HSPs)
scaffold0262 (307-380)||(16296-16369)
[»] scaffold0027 (1 HSPs)
scaffold0027 (309-391)||(121987-122068)
[»] scaffold0006 (1 HSPs)
scaffold0006 (411-459)||(81498-81546)


Alignment Details
Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 8 - 378
Target Start/End: Original strand, 44145477 - 44145844
Alignment:
Q  8 cacacttccttctaaaggtcttggcttcttcttccagatgattcaggagcatctttgctcttagtgtctctcaagtgaagagaaggtatgtgcatcaaga 107  Q
    |||||||||||| |||||||||||||||||||    ||||| ||  ||||||||| |||| |||||||||||| | ||||||| |||||| |||||||||    
T  44145477 cacacttccttccaaaggtcttggcttcttctgtaggatgactcgagagcatcttcgctcctagtgtctctcaggagaagagatggtatgggcatcaaga 44145576  T
Q  108 gtagtttccatcatattttcaatgctaacaaaccaaaatgaaatgggaatgcttttaatttgttgaacttcaaagggattaaagatgctcttagcatatg 207  Q
    |||||||||||||| ||| |||||| |||| |||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |    
T  44145577 gtagtttccatcatgtttccaatgccaacataccataatgaaatgggaatgtttctaatttgttgaacttcaaagggattaaagatgctcttagcatacg 44145676  T
Q  208 atggttaaacttttttgcacctaggaataaaaaatgcagagttgtttaactcatgtcttactcgtatgaagattagagaactacaaagtaaacactctta 307  Q
    |||||||| |||||  |||  | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  44145677 atggttaagctttta-gca--tgggaataaaaaatgcagagttgtttaactcatgtcttacacgtatgaagattagagaactacaaagtaaatactctta 44145773  T
Q  308 gggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaa 378  Q
    ||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44145774 gggtgtgtttggattcaaggtttaggaggggaagggaggggaggactcacttttattttttaaattacgaa 44145844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 413 - 666
Target Start/End: Original strand, 44145842 - 44146095
Alignment:
Q  413 gaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcct 512  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44145842 gaagtattacatgatcatttataatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcct 44145941  T
Q  513 aaaccctcttcccaaacacacccttaataaagtaagtcaaaaagaattaatataagtaattaaaagtagtactatcatgtatctacttttcattcatatt 612  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  44145942 aaaccctctttccaaatacacccttaataaagtaagtcaaaaagaattaatataagtaattaaaggtagtactatcatgtatctacttttcattcatatt 44146041  T
Q  613 ccacattctattgatcttaccaactttcttgtgaattctcgtagcttaagactt 666  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44146042 ccacattctattgatcttaccaactttcttgtgaattctcttagcttaagactt 44146095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 8 - 307
Target Start/End: Complemental strand, 44156495 - 44156199
Alignment:
Q  8 cacacttccttctaaaggtcttggcttcttcttccagatgattcaggagcatctttgctcttagtgtctctcaagtgaagagaaggtatgtgcatcaaga 107  Q
    |||||||||||| |||||||||||||||||||    ||||| ||  ||||||||| |||| |||||||||||| | ||||||| |||||| |||||||||    
T  44156495 cacacttccttccaaaggtcttggcttcttctgtaggatgactcgagagcatcttcgctcctagtgtctctcaggagaagagatggtatgggcatcaaga 44156396  T
Q  108 gtagtttccatcatattttcaatgctaacaaaccaaaatgaaatgggaatgcttttaatttgttgaacttcaaagggattaaagatgctcttagcatatg 207  Q
    |||||||||||||| ||| |||||| |||| |||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |    
T  44156395 gtagtttccatcatgtttccaatgccaacataccataatgaaatgggaatgtttctaatttgttgaacttcaaagggattaaagatgctcttagcatacg 44156296  T
Q  208 atggttaaacttttttgcacctaggaataaaaaatgcagagttgtttaactcatgtcttactcgtatgaagattagagaactacaaagtaaacactctta 307  Q
    |||||||| | |||| |||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  44156295 atggttaagc-ttttagca--tgggaataaaaaatgcagagttgtttaactcatgtcttactcgtatgaagattagagaattacatagtaaacactctta 44156199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 305 - 539
Target Start/End: Complemental strand, 17182731 - 17182490
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 399  Q
    ||||||||||||||||||||||||||| |||||||| ||| |||||| || |||||||||||||||||||||||||| ||||||| | ||||     |||    
T  17182731 ttagggtgtgtttggattgagggtttatgaggggaaaggaagggaggacttacttttattttttaaattacgaacaaggtaaaatatttttttaaaataa 17182632  T
Q  400 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttt--taaaaatcattttataatgtctttaaattaaaaaaggaatgt 497  Q
    |||||||||||||||||||||| ||||||||| |||||  ||||||||||||||||   |||||||||||||||| |||  ||| ||||||||| || ||    
T  17182631 attaagtgtttttgaagtattatatgatcatttatcatattgttaattcaatttttgcaaaaaatcattttataacgtcaataatttaaaaaagaaaagt 17182532  T
Q  498 aagccctcccctcctaaaccctcttcccaaacacacccttaa 539  Q
    ||  | |||||||||||| |||||  ||||||||||| ||||    
T  17182531 aaatcttcccctcctaaaacctctatccaaacacacctttaa 17182490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 309 - 538
Target Start/End: Original strand, 55080581 - 55080815
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----tta 403  Q
    ||||||||||||||||||||||||||| ||||| |||| || || ||| ||||||||| |||||||||||||||||||||||| |||| |||     |||    
T  55080581 ggtgtgtttggattgagggtttaggagaggaagagaggagatggttcatttttattttgtaaattacgaacaatgtaaaatgttttttcaaaataagtta 55080680  T
Q  404 agtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccc 503  Q
    |||||||||||||||||  ||||||||| |||||| |||||||| |||||| ||||||| ||||||||||||   ||| ||||||||| || ||||| ||    
T  55080681 agtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgttcgtaatttaaaaaagaaaagtaagtcc 55080780  T
Q  504 tcccctcctaaaccctcttcccaaacacaccctta 538  Q
    |||| ||||||||||||   |||||||||||||||    
T  55080781 tcccatcctaaaccctccatccaaacacaccctta 55080815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 305 - 533
Target Start/End: Original strand, 22186717 - 22186950
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaa 404  Q
    ||||||||| |||||||||||||||||||| |||||||||||| || | ||||||||| |||||||||||| ||||| ||||||||| |||||||| |||    
T  22186717 ttagggtgtatttggattgagggtttaggaagggaagggagggcagagttcacttttaatttttaaattacaaacaacgtaaaatgtttttttaaaataa 22186816  T
Q  405 -----gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaa 499  Q
         ||||||||||||||||| || |||||| |||||| ||||||||||||||| |||||||||||||||||||||  ||| ||||||||| || || |    
T  22186817 ataaagtgtttttgaagtattatataatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagtga 22186916  T
Q  500 gccctcccctcctaaaccctcttcccaaacacac 533  Q
    | ||||||||  |||||||||   ||||||||||    
T  22186917 gtcctccccttttaaaccctccatccaaacacac 22186950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 307 - 536
Target Start/End: Original strand, 56135749 - 56135965
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 401  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||     |||||    
T  56135749 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttcatttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaat 56135848  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 501  Q
    |||||||||||||||||||| ||||||||| ||||   ||||||||||||||| |||||               |||||| ||||||||| || ||||||    
T  56135849 taagtgtttttgaagtattatatgatcatttatca---tgttaattcaattttctaaaa---------------ctttaatttaaaaaagaaaagtaagc 56135930  T
Q  502 cctcccctcctaaaccctcttcccaaacacaccct 536  Q
    |||||||||||||||||||   |||||||||||||    
T  56135931 cctcccctcctaaaccctccatccaaacacaccct 56135965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 307 - 511
Target Start/End: Complemental strand, 7977741 - 7977530
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------taaa 400  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||| ||| ||||||||||||||||||||| |||||||||||| ||||      ||||    
T  7977741 agggtgtgtttggattgagggtttatgaggggaaaggaggggagggttcaattttattttttaaattacgaagaatgtaaaatgttttttttaaagtaaa 7977642  T
Q  401 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaatt-aaaaaaggaatgtaa 499  Q
    |||| |||||||||||||||| ||||||||| |||||| |||||||||||||||  ||| || ||||||||||||   ||| || ||||||| || ||||    
T  7977641 ttaattgtttttgaagtattatatgatcatttatcatgttgttaattcaattttcaaaatattattttataatgttcgtaatttaaaaaaagaaaagtaa 7977542  T
Q  500 gccctcccctcc 511  Q
    ||||||||||||    
T  7977541 gccctcccctcc 7977530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 346 - 536
Target Start/End: Original strand, 43961449 - 43961644
Alignment:
Q  346 gggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatcatgct 440  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||     ||||||||||||||||||||| ||||||||| |||||| |    
T  43961449 gggagggctcacttttattttttaaattatgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 43961548  T
Q  441 gttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttcccaaacacaccct 536  Q
    | |||||||||||| ||||||||||||||||||||   ||| ||||||||| ||  |||||||||||||| ||| |||||   |||||||||||||    
T  43961549 gataattcaattttctaaaaatcattttataatgttcataatttaaaaaagaaaaataagccctcccctcataatccctccatccaaacacaccct 43961644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 307 - 511
Target Start/End: Original strand, 37761465 - 37761673
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaatt 402  Q
    ||||||||||||||||||| |||||||||| ||| |||||| || | ||||||||| ||||||||||||||||||  |||||| | ||||    ||||||    
T  37761465 agggtgtgtttggattgagagtttaggaggagaaaggagggtagagttcacttttaatttttaaattacgaacaacataaaatattttttagaataaatt 37761564  T
Q  403 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagcc 502  Q
    ||||||||||||||| ||| || |||||| |||||| ||||||||||||||| |||||||||||| ||||||||  ||| ||||||||| || | |||||    
T  37761565 aagtgtttttgaagtgttatataatcatttatcatgttgttaattcaattttctaaaaatcatttcataatgtccataatttaaaaaagaaaaggaagcc 37761664  T
Q  503 ctcccctcc 511  Q
    |||||||||    
T  37761665 ctcccctcc 37761673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 309 - 511
Target Start/End: Complemental strand, 47846298 - 47846090
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------taaatt 402  Q
    ||||||||||||||||||||||| |||| ||||||| ||||||| | ||||||||||||||||||| |||||||||||| ||| ||||      ||||||    
T  47846298 ggtgtgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaattatgaacaatgtaaagtgttttttttaaaataaatt 47846199  T
Q  403 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagcc 502  Q
    ||||||||||||||||||| ||||| ||| |||||| | ||||||||||||| ||||||| |||||||||||||   || ||||||||| || |||| |     
T  47846198 aagtgtttttgaagtattatatgattatttatcatgttcttaattcaattttgtaaaaattattttataatgtccagaatttaaaaaagaaaagtaaact 47846099  T
Q  503 ctcccctcc 511  Q
    |||||||||    
T  47846098 ctcccctcc 47846090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 303 - 511
Target Start/End: Complemental strand, 54576577 - 54576362
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt----- 397  Q
    |||||||||||||||||||| |||||||| ||| ||||||||| | || | ||||||||| |||||||||||||||||| ||||||||| |||||         
T  54576577 tcttagggtgtgtttggattaagggtttaagagaggaagggagagaagagttcacttttaatttttaaattacgaacaacgtaaaatgttttttttttaa 54576478  T
Q  398 --aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaat 495  Q
      ||||||| |||||||||||||||| || |||||| |||| | ||||||||||||||| || ||||||||||||||||||  |||  |||||||| ||     
T  54576477 ataaattaaatgtttttgaagtattatataatcatttatcacgttgttaattcaattttctataaatcattttataatgtccgtaatctaaaaaagaaaa 54576378  T
Q  496 gtaagccctcccctcc 511  Q
    ||||||||||||||||    
T  54576377 gtaagccctcccctcc 54576362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 307 - 491
Target Start/End: Complemental strand, 29994015 - 29993826
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaa-----at 401  Q
    |||||| |||| |||| ||| |||||||||| || ||||||||||| ||||||||| ||||||||||||||||||||||||| || |||||||     ||    
T  29994015 agggtgagtttagattaaggatttaggagggaaatggaggggagggttcacttttactttttaaattacgaacaatgtaaaaagtttttttaaaatagat 29993916  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 491  Q
    ||||| |||||||||||||| || |||||  |||||| ||||||||||||||| |||||||||||||||| ||||  ||| |||||||||    
T  29993915 taagtatttttgaagtattatatcatcatcaatcatgttgttaattcaattttctaaaaatcattttatagtgtccgtaatttaaaaaag 29993826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 342 - 491
Target Start/End: Complemental strand, 4437633 - 4437480
Alignment:
Q  342 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaattaagtgtttttgaagtattacatgatcattgatcat 437  Q
    ||||||||||| ||| |||||||||||||||||  ||||||||||||||| |||     ||||| ||||||||||||||||||| ||||||| | |||||    
T  4437633 ggaggggagggttcatttttattttttaaattaaaaacaatgtaaaatgtttttaaaaataaatcaagtgtttttgaagtattatatgatcaattatcat 4437534  T
Q  438 gctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 491  Q
    | |||||||||||||||||||||||||||||||||| ||  ||| |||||||||    
T  4437533 gttgttaattcaattttttaaaaatcattttataatatccataatttaaaaaag 4437480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 305 - 491
Target Start/End: Original strand, 5824899 - 5825085
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaa 404  Q
    |||||||||||||||||||||||||| ||| ||||| | |||  || ||||| ||||||||||||||||||||| |||||||||||| | |||||| |||    
T  5824899 ttagggtgtgtttggattgagggttttggaagggaatgaaggttagtgctcatttttattttttaaattacgaaaaatgtaaaatgtttgtttaaaataa 5824998  T
Q  405 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 491  Q
        ||| ||    ||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||| | |||||||    
T  5824999 aatgtttggattggttatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtctgtaattcaaaaaag 5825085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 307 - 490
Target Start/End: Original strand, 51329796 - 51329983
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 401  Q
    ||||||||||||||||||| |||||||||||||||  || |||| | ||| ||||| ||||||||||||||||||   ||||||| ||||     |||||    
T  51329796 agggtgtgtttggattgagagtttaggaggggaagaaagaggagagttcaattttaatttttaaattacgaacaacacaaaatgtttttttaaaataaat 51329895  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaa 490  Q
    ||||| |||||||||||||| || |||||| |||||  ||||||||||||||| || |||| |||||||||| ||  ||| ||||||||    
T  51329896 taagt-tttttgaagtattatataatcatttatcattttgttaattcaattttctataaattattttataatatccctaatttaaaaaa 51329983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 307 - 507
Target Start/End: Complemental strand, 21695132 - 21694929
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt----aaatt 402  Q
    ||||||||||||||||| ||||||| |||||||||| || |||||| | |||||| | |||||||||| | ||||| |||  | | |||||    |||||    
T  21695132 agggtgtgtttggattgggggtttatgaggggaaggaagcggagggtttacttttctattttaaattatggacaatataatttattttttttaataaatt 21695033  T
Q  403 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagcc 502  Q
    ||||||  ||||||||||| ||||||||| |||||  ||||| |||||||| ||||||| ||||||||| ||||  ||| ||||||||| || |||||||    
T  21695032 aagtgtgattgaagtattatatgatcatt-atcattttgttatttcaatttattaaaaaccattttatagtgtccgtaatttaaaaaagaaaagtaagcc 21694934  T
Q  503 ctccc 507  Q
    |||||    
T  21694933 ctccc 21694929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 307 - 396
Target Start/End: Original strand, 49735468 - 49735557
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 396  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| ||||  | |||||||||||    
T  49735468 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacggacaacatgaaatgtctttt 49735557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 366 - 490
Target Start/End: Complemental strand, 54001289 - 54001162
Alignment:
Q  366 tttaaattacgaacaatgtaaaatgtctttttaaattaa------gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaa 459  Q
    ||||||| ||||||||||||||||||||||||||| |||      ||||||||||||||||| ||||||||| ||||||   ||||||||||||||||||    
T  54001289 tttaaatcacgaacaatgtaaaatgtctttttaaaataaataaaagtgtttttgaagtattatatgatcatttatcatg---ttaattcaattttttaaa 54001193  T
Q  460 aatcattttataatgtctttaaattaaaaaa 490  Q
    ||| |||||||||||||  ||| ||||||||    
T  54001192 aattattttataatgtccgtaatttaaaaaa 54001162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 309 - 500
Target Start/End: Original strand, 34995052 - 34995247
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggaggg-ctcacttttattttttaaattacgaacaatgtaaaatgtcttt-----ttaaatt 402  Q
    |||||||||| |||||||| ||  ||| |||||||| ||||  | | |||||||||||||||||||||||||||||| |||||| |||      ||||||    
T  34995052 ggtgtgtttgaattgaggggttgagagaggaagggaagggaatgacacacttttattttttaaattacgaacaatgtgaaatgtttttctaaaataaatt 34995151  T
Q  403 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaag 500  Q
    ||||||||||||||||||| | ||| ||| ||||||   ||||||||||||| |||||||||||| ||||| ||  ||| ||||||||| || |||||    
T  34995152 aagtgtttttgaagtattataagattatttatcatg--tttaattcaattttctaaaaatcatttgataatatccgtaatttaaaaaagaaaagtaag 34995247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 590 - 666
Target Start/End: Complemental strand, 44156052 - 44155976
Alignment:
Q  590 tgtatctacttttcattcatattccacattctattgatcttaccaactttcttgtgaattctcgtagcttaagactt 666  Q
    ||||||||||||| ||||||||||| |||| || |||| ||||||||||||||||||||||||||||||||||||||    
T  44156052 tgtatctacttttaattcatattccccattttagtgattttaccaactttcttgtgaattctcgtagcttaagactt 44155976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 307 - 400
Target Start/End: Original strand, 54935067 - 54935161
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaaggga-ggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 400  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| | |||||| ||||||||||||||||| || ||| |||| ||| ||||    
T  54935067 agggtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaattacgaactatataacatgtttttctaaa 54935161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 304 - 373
Target Start/End: Complemental strand, 46007948 - 46007879
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaatt 373  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||    
T  46007948 cttagagtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatt 46007879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 364 - 477
Target Start/End: Original strand, 9030272 - 9030391
Alignment:
Q  364 tttttaaattacgaacaatgtaaaatgtctttt------taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaatttttta 457  Q
    |||||||||||||||||| ||||||||| ||||      |||||||||||||||| |||||||| || |||||| |||||  | |||||| |||||| ||    
T  9030272 tttttaaattacgaacaacgtaaaatgttttttaaacaataaattaagtgtttttaaagtattatataatcatttatcattttattaattaaattttcta 9030371  T
Q  458 aaaatcattttataatgtct 477  Q
    ||||||||||||||||||||    
T  9030372 aaaatcattttataatgtct 9030391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 305 - 400
Target Start/End: Complemental strand, 35543543 - 35543448
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 400  Q
    ||||| ||||||||||||||||||||| ||||||||  || ||||| |||||||||||||||| ||||||||||||  ||||||| | ||||||||    
T  35543543 ttaggatgtgtttggattgagggtttatgaggggaaatgatgggagagctcacttttatttttaaaattacgaacatagtaaaatatttttttaaa 35543448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 304 - 520
Target Start/End: Complemental strand, 47433956 - 47433734
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaat-gtaaaatgtctttt-----t 397  Q
    |||||||||||||||| |||| |||||||||||||||||||| |||||| | |||||| |||||||||||||  || ||  ||| |||| ||||     |    
T  47433956 cttagggtgtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaattacagactataataacatgtttttttaaaat 47433857  T
Q  398 aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgt 497  Q
    |||||||||||  ||||||||||| |||||| || || ||| | ||| || ||||||||||||| ||||  ||||||||  ||| ||||||| | ||  |    
T  47433856 aaattaagtgtgattgaagtattatatgatcgtttat-atgttattattttaattttttaaaaaacattccataatgtccataatttaaaaacgaaaatt 47433758  T
Q  498 aagccc-tcccctcctaaaccctc 520  Q
    || ||| |||||||||||||||||    
T  47433757 aaacccttcccctcctaaaccctc 47433734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 54320680 - 54320609
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |   ||||| |||||||||||||    
T  54320680 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgattttaatttttaaattacg 54320609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 311 - 471
Target Start/End: Original strand, 55510173 - 55510338
Alignment:
Q  311 tgtgtttggattgagggtttaggaggggaaggg-aggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaa 404  Q
    ||||||||||||||||| |||||  |||||||| |||||||| || ||||||  ||||||| |||   |||||||||||||| ||||||||     ||||    
T  55510173 tgtgtttggattgaggggttagggagggaaggggaggggaggacttacttttcatttttaatttaaagacaatgtaaaatgtttttttaaaataaattaa 55510272  T
Q  405 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttata 471  Q
    ||||   |||||||||| ||||||||| |||||| ||||| ||||||||||| ||||| ||||||||    
T  55510273 gtgtgactgaagtattatatgatcattcatcatgttgttatttcaatttttttaaaat-attttata 55510338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 31348565 - 31348500
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaat 372  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| | |||||| ||||||||||    
T  31348565 agggtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaat 31348500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 310 - 418
Target Start/End: Original strand, 51074344 - 51074459
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-------taaatt 402  Q
    |||||||||| || ||| ||||||||| ||| ||| ||||||||||||||||||||||||||||| ||||| |||||| ||| ||||       ||||||    
T  51074344 gtgtgtttgggttaaggatttaggaggagaaaggacgggagggctcacttttattttttaaattatgaacattgtaaagtgtttttttttttaataaatt 51074443  T
Q  403 aagtgtttttgaagta 418  Q
    ||||||||||||||||    
T  51074444 aagtgtttttgaagta 51074459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 309 - 390
Target Start/End: Original strand, 54576329 - 54576410
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 390  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||| |||||| ||||||| |||||| ||| | |||||||    
T  54576329 ggtgtgtttggatggagggtttagaaggggaagggaggggagggcttacttttcttttttagattacggacattataaaatg 54576410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 303 - 376
Target Start/End: Complemental strand, 54935317 - 54935244
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| | | ||||  |||||||||||||    
T  54935317 tcttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacg 54935244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 309 - 397
Target Start/End: Complemental strand, 47846505 - 47846417
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt 397  Q
    ||||||||||||||||||||||| |||| |||||||  ||| || | ||||||||||||||||||| |||||||||||| ||| |||||    
T  47846505 ggtgtgtttggattgagggtttaagaggagaagggaaaggaaggtttacttttattttttaaattatgaacaatgtaaagtgttttttt 47846417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 305 - 352
Target Start/End: Complemental strand, 49735738 - 49735691
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggaggg 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  49735738 ttagggtgtgtttggattgagggtttaggaggggaagggaggggaggg 49735691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 307 - 428
Target Start/End: Original strand, 29798288 - 29798410
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt-ttaaattaag 405  Q
    |||||||||||||||||| |||||||||||||||| ||| |||  | | ||||||||||||||||||||  || || ||| |||| ||| |||||| |||    
T  29798288 agggtgtgtttggattgatggtttaggaggggaagagagaggatagtttacttttattttttaaattacagactatataacatgtttttcttaaatcaag 29798387  T
Q  406 tgtttttgaagtattacatgatc 428  Q
    |||  ||||||||||| ||||||    
T  29798388 tgtgattgaagtattatatgatc 29798410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 305 - 369
Target Start/End: Original strand, 16400798 - 16400862
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttatttttta 369  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  16400798 ttagtgtgtgattggattgagggtttaggaggagaagggaggggaggattcacttttatttttta 16400862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 27735749 - 27735881
Alignment:
Q  311 tgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaag 405  Q
    ||||||||||| |||||||||||||||||||||| | ||||| | | ||||  ||||||||||||| || || ||| |||| ||||     |||||||||    
T  27735749 tgtgtttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattacggactatataacatgtttttttaaaataaattaag 27735848  T
Q  406 tgtttttgaagtattacatgatcattgatcatg 438  Q
    |||  ||||||||||| ||||||||| ||||||    
T  27735849 tgtgattgaagtattatatgatcatttatcatg 27735881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 305 - 389
Target Start/End: Complemental strand, 37711369 - 37711285
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 389  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| | |  |||  ||||||||||||| ||| | ||||||    
T  37711369 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagatttcatttttaaattacggacactataaaat 37711285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 405 - 539
Target Start/End: Original strand, 11089619 - 11089756
Alignment:
Q  405 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc--- 501  Q
    |||||||||||||| || ||||||||| || ||| ||||||||||||||| ||||||  ||||||||| |||  ||| ||||||||| ||||||| |       
T  11089619 gtgtttttgaagtaatatatgatcatttatgatgttgttaattcaattttctaaaaaatattttataaagtccgtaatttaaaaaagaaatgtaaaccat 11089718  T
Q  502 cctcccctcctaaaccctcttcccaaacacacccttaa 539  Q
    | |||||| ||||| ||||   ||||||||||||||||    
T  11089719 cttccccttctaaatcctcaatccaaacacacccttaa 11089756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 323 - 390
Target Start/End: Original strand, 21694906 - 21694973
Alignment:
Q  323 gagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 390  Q
    |||||||||||||||||||||| ||||||||| |||||| |||||||||||||| ||| | |||||||    
T  21694906 gagggtttaggaggggaagggacgggagggcttacttttcttttttaaattacggacactataaaatg 21694973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 309 - 396
Target Start/End: Complemental strand, 27735987 - 27735900
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 396  Q
    ||||||||||||| ||||||||||||||||||||||||  |||| ||| ||||  ||||||||||||| ||| | |||||||| ||||    
T  27735987 ggtgtgtttggatggagggtttaggaggggaagggaggatagggttcatttttcatttttaaattacggacactataaaatgtttttt 27735900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 374
Target Start/End: Complemental strand, 37761712 - 37761641
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaatta 374  Q
    ||||||||||||||||||| |||| ||||  |||||||||||||||||||||  ||||| ||||||||||||    
T  37761712 tcttagggtgtgtttggatggaggatttaaaaggggaagggaggggagggcttccttttcttttttaaatta 37761641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 475
Target Start/End: Original strand, 14539367 - 14539445
Alignment:
Q  397 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgt 475  Q
    ||||||||||||||||||||||||| ||||||||| || ||| | |||||| |||||| ||| || |||||||||||||    
T  14539367 taaattaagtgtttttgaagtattatatgatcatttattatgttcttaatttaattttctaacaaacattttataatgt 14539445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 305 - 375
Target Start/End: Original strand, 26166935 - 26167005
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| | |   |||| |||||||||||||    
T  26166935 ttagggtgtgtttggattgagggtttaggaggggaatggaggggagagtttgtttttcttttttaaattac 26167005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 376
Target Start/End: Complemental strand, 1968603 - 1968534
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||||||||||||||||||||||||||||| || | | | ||||  |||||||||||||    
T  1968603 agggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacg 1968534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 376
Target Start/End: Complemental strand, 6938491 - 6938422
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||| || |||||| |||||||| ||||||||||| ||||||||  |||||||||||||    
T  6938491 agggtgtgtttggatggaaggtttatgaggggaatggaggggagggttcacttttcatttttaaattacg 6938422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 489
Target Start/End: Complemental strand, 17938352 - 17938164
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------taaa 400  Q
    ||||| |||||||||||||  ||||||||||||||||||  ||| | | |||||| ||||||||||||| ||| || ||| || | ||||      ||||    
T  17938352 agggtatgtttggattgagaatttaggaggggaagggagatgagagtttacttttcttttttaaattacaaactatataacatatttttttttaaataaa 17938253  T
Q  401 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaa 489  Q
    ||||||||  ||||||||||| |||||| || |||||| | ||| || || |||||||||| ||||  ||||||||  ||| |||||||    
T  17938252 ttaagtgtgattgaagtattatatgatcgtttatcatgttattattttaaatttttaaaaaacattccataatgtccataatttaaaaa 17938164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 37711138 - 37711183
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggaggg 352  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  37711138 agggtgtgtttggattgagggtttaggaggggaagggaagggaggg 37711183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 310 - 390
Target Start/End: Original strand, 29993774 - 29993854
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 390  Q
    ||||||||||||| |||||||||||||||||| ||| ||||| |||  |||| |||||||||||||| ||| | |||||||    
T  29993774 gtgtgtttggattaagggtttaggaggggaagtgagtggaggactcgtttttcttttttaaattacggacactataaaatg 29993854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 304 - 376
Target Start/End: Complemental strand, 34995296 - 34995224
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||| |||||||||||||||| |||||| ||||| | | || |||||| ||||||||||||||    
T  34995296 cttagggtgtgtttagattgagggtttaggaagggaagtgagggtaagacttacttttcttttttaaattacg 34995224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 305 - 361
Target Start/End: Original strand, 35565556 - 35565612
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcactttt 361  Q
    |||| ||| ||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  35565556 ttagagtgcgtttggattgagggtttagcaggggaagggaggggagggcttactttt 35565612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 530 - 590
Target Start/End: Complemental strand, 44156207 - 44156147
Alignment:
Q  530 acacccttaataaagtaagtcaaaaagaattaatataagtaattaaaagtagtactatcat 590  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||| ||| |||||||||    
T  44156207 acactcttaataaaataagtcaaagagaattaatataagtaattaaaggtaatactatcat 44156147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 305 - 437
Target Start/End: Complemental strand, 45132741 - 45132610
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaa 404  Q
    |||||||||||||| |||||| ||||||||||||||| |||| || || | |||||| |||||||||||||| || || ||| ||||     ||||||||    
T  45132741 ttagggtgtgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattacggactatataatatgt-aaaataaattaa 45132643  T
Q  405 gtgtttttgaagtattacatgatcattgatcat 437  Q
    ||||  ||||||||||| |||||| || |||||    
T  45132642 gtgtgattgaagtattatatgatcgtttatcat 45132610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 45741888 - 45741959
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||||||||||||||||||||||||| | | | ||||  | |||||| ||||||||||||||    
T  45741888 ttagggtgtgtttggattgagggtttaggaggggaatgaatgtgaggatttacttttgttttttaaattacg 45741959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 309 - 375
Target Start/End: Complemental strand, 2248043 - 2247977
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    |||||||||||||||||||||||||||| |||| || ||||| | | |||||| |||||||||||||    
T  2248043 ggtgtgtttggattgagggtttaggaggagaagtgaagggagagtttacttttcttttttaaattac 2247977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 41174589 - 41174547
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggagggga 349  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  41174589 agggtgtgtttggatggagggtttaggaggggaagggagggga 41174547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 423 - 473
Target Start/End: Original strand, 51075218 - 51075268
Alignment:
Q  423 atgatcattgatcatgctgttaattcaattttttaaaaatcattttataat 473  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||||||||    
T  51075218 atgatcatttatcatgttgttaattcaattttttaaaaattattttataat 51075268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 342 - 436
Target Start/End: Original strand, 41227518 - 41227614
Alignment:
Q  342 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt--taaattaagtgtttttgaagtattacatgatcattgatca 436  Q
    |||||| |||||| |||| | |||||||||||| ||||||| ||||||||| |||   |||||||||||  ||||||||||| ||||||||| ||||    
T  41227518 ggagggcagggcttacttctcttttttaaattatgaacaatataaaatgtcatttaaaaaattaagtgtgattgaagtattatatgatcatttatca 41227614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 348
Target Start/End: Original strand, 53260718 - 53260759
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggagggg 348  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  53260718 agggtgtgtttggatggagggtttaggaggggaagggagggg 53260759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 5731072 - 5731032
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggag 350  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  5731072 gtgtgtttgaattgagggtttaggaggggaagggaggggag 5731032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 54320435 - 54320475
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggg 347  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  54320435 agggtgtgtttggattgagggtttaggagggaaagggaggg 54320475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 41174354 - 41174388
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggagggga 339  Q
    |||||||||||||||||||||||||||||||||||    
T  41174354 ttagggtgtgtttggattgagggtttaggagggga 41174388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 341
Target Start/End: Original strand, 27775580 - 27775617
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaag 341  Q
    |||||||| |||||||||||||||||||||||||||||    
T  27775580 cttagggtttgtttggattgagggtttaggaggggaag 27775617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 34110803 - 34110840
Alignment:
Q  312 gtgtttggattgagggtttaggaggggaagggagggga 349  Q
    |||||||||||||||||||||||||||||| |||||||    
T  34110803 gtgtttggattgagggtttaggaggggaagagagggga 34110840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 376
Target Start/End: Complemental strand, 45742134 - 45742065
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||||  |||||||||| ||| |||||||||||| | | ||||||  |||||||||||||    
T  45742134 agggtgtgtttggatgaagggtttaggcgggaaagggaggggagagtttacttttcatttttaaattacg 45742065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 310 - 374
Target Start/End: Original strand, 4437428 - 4437492
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaatta 374  Q
    |||||||||||| |||||||||||| || ||||||||||| | || | |||| ||||||||||||    
T  4437428 gtgtgtttggatggagggtttaggatggaaagggaggggatgacttatttttcttttttaaatta 4437492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 31348314 - 31348390
Alignment:
Q  305 ttagggtgtgtttggattgagggtttag-----gaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||||| ||||||||||     ||||||||||||||| |||| | ||||||  |||||||||||||    
T  31348314 ttagggtgtgtttggatggagggtttagtttatgaggggaagggagggaagggtttacttttcatttttaaattacg 31348390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 305 - 361
Target Start/End: Original strand, 47694347 - 47694403
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcactttt 361  Q
    ||||||| ||||||||| |||| ||| |||| |||||||||||||||||| ||||||    
T  47694347 ttagggtatgtttggatggaggattttggagcggaagggaggggagggcttactttt 47694403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 352
Target Start/End: Original strand, 5730828 - 5730875
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggaggg 352  Q
    ||||||||||||||||| ||||||||||||||| ||| || |||||||    
T  5730828 ttagggtgtgtttggatggagggtttaggagggaaagagatgggaggg 5730875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 4437660 - 4437626
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggagggga 339  Q
    |||||||||||||||||||| ||||||||||||||    
T  4437660 ttagggtgtgtttggattgaaggtttaggagggga 4437626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 7977520 - 7977578
Alignment:
Q  332 ggaggggaagggaggggagggctcactttt-attttttaaattacgaacaatgtaaaat 389  Q
    |||||| |||||||||||||||| ||||||  |||||||||||||||||| | ||||||    
T  7977520 ggagggaaagggaggggagggcttacttttctttttttaaattacgaacattataaaat 7977578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 442 - 520
Target Start/End: Complemental strand, 35543411 - 35543333
Alignment:
Q  442 ttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctc 520  Q
    ||||||||||||||||||||| ||||||||||||   ||| ||||||||| ||  ||||  ||||| || |||||||||    
T  35543411 ttaattcaattttttaaaaattattttataatgttcctaatttaaaaaagaaaaataagttctcccttcttaaaccctc 35543333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 56135967 - 56135933
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggagggga 339  Q
    ||||||||||||||||| |||||||||||||||||    
T  56135967 ttagggtgtgtttggatggagggtttaggagggga 56135933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 374
Target Start/End: Complemental strand, 23332786 - 23332709
Alignment:
Q  297 aaacactcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaatta 374  Q
    |||||| | |||| ||||||||||||||| ||||  ||||||||| ||| | | | ||||||||| ||||||||||||    
T  23332786 aaacacgcctaggatgtgtttggattgagagtttgtgaggggaagagagtgaatgactcacttttcttttttaaatta 23332709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 24565346 - 24565415
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||| || ||||||||| ||||||   |||||||| | ||||||  |||||||||||||    
T  24565346 agggtgtgtttggatggaaggtttaggaagggaagactggggagggtttacttttcatttttaaattacg 24565415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 305 - 361
Target Start/End: Original strand, 1968349 - 1968405
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcactttt 361  Q
    |||||||| ||||||||| |||||||  ||||| |||||||||||||| | ||||||    
T  1968349 ttagggtgcgtttggattaagggtttgagagggaaagggaggggagggtttactttt 1968405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 375
Target Start/End: Complemental strand, 5825140 - 5825072
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    ||||||||||||||| ||||||||||||| ||||| | || ||||  | |||||| |||||| ||||||    
T  5825140 agggtgtgtttggatggagggtttaggagaggaagtggggagaggatttacttttcttttttgaattac 5825072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 454 - 530
Target Start/End: Complemental strand, 11842401 - 11842325
Alignment:
Q  454 tttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttcccaaaca 530  Q
    ||||||||  |||||||| ||||| ||| || |||||| || ||||| |||||||| |||||||||||  |||||||    
T  11842401 tttaaaaaatattttatagtgtctgtaatttgaaaaagaaaagtaagtcctccccttctaaaccctctatccaaaca 11842325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 305 - 337
Target Start/End: Original strand, 22920979 - 22921011
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggg 337  Q
    |||||||||||||||||||| ||||||||||||    
T  22920979 ttagggtgtgtttggattgatggtttaggaggg 22921011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 305 - 337
Target Start/End: Complemental strand, 22970820 - 22970788
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggg 337  Q
    |||||||||||||||||||| ||||||||||||    
T  22970820 ttagggtgtgtttggattgatggtttaggaggg 22970788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 32192847 - 32192891
Alignment:
Q  347 ggagggctcacttttattttttaaattacgaacaatgtaaaatgt 391  Q
    |||||| |||||||||||||||||||||  || ||||||||||||    
T  32192847 ggagggttcacttttattttttaaattatcaataatgtaaaatgt 32192891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 323 - 351
Target Start/End: Complemental strand, 49735695 - 49735667
Alignment:
Q  323 gagggtttaggaggggaagggaggggagg 351  Q
    |||||||||||||||||||||||||||||    
T  49735695 gagggtttaggaggggaagggaggggagg 49735667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 8e-72; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 307 - 511
Target Start/End: Complemental strand, 12022387 - 12022178
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 401  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||     |||||    
T  12022387 agggtgtgtttggattgagggtttaggaggggaaaggaggggagggctcacttttattttttaaattacggacaatgtaaaatgtttttttaaaataaat 12022288  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 501  Q
    |||||||||||||||||||| ||||||||| |||||| ||||||||||||||| ||||||||||||||||||||   ||| ||||||||| || ||||||    
T  12022287 taagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgttcgtaatttaaaaaagaaaagtaagc 12022188  T
Q  502 cctcccctcc 511  Q
    ||||||||||    
T  12022187 cctcccctcc 12022178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 342 - 539
Target Start/End: Original strand, 39449339 - 39449546
Alignment:
Q  342 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaa-----attaagtgtttttgaagtattacatgatcattgatca 436  Q
    |||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||     ||||| |||||||||||||||| ||||||||| ||||    
T  39449339 ggagaggagagctcacttttattttttaaattacgaacaatgtgaaatgtctttttaagataaattaactgtttttgaagtattatatgatcattaatca 39449438  T
Q  437 tgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaag-----ccctcccctcctaaaccctcttcccaaacac 531  Q
    || ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||     |||||||||||||||| ||||||||||||||    
T  39449439 tgttgttaattcaattttttaaaaataattttataacgtctttaaattaaaaaaggaatgtaagccctcccctcccctcctaaactctcttcccaaacac 39449538  T
Q  532 acccttaa 539  Q
    ||||||||    
T  39449539 acccttaa 39449546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 307 - 500
Target Start/End: Complemental strand, 8815385 - 8815187
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaatt 402  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||| |||||||||| ||||    ||||||    
T  8815385 agggtgtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaattacgaacactgtaaaatgttttttcaaataaatt 8815286  T
Q  403 -aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaag 500  Q
     ||||||||||||||||||| || |||||| |||||| |||| |||||||||| |||||||||||||||||||||  ||| ||||||||| || |||||    
T  8815285 aaagtgtttttgaagtattatataatcatttatcatgttgttgattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaag 8815187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 307 - 511
Target Start/End: Original strand, 43732679 - 43732896
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt---------- 396  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| ||||              
T  43732679 agggtgtgtttggattgagggtttaggaggggaagggagaggaggactcacttttattttttaaattactaacaatgtaaaatgtttttttttttaaaaa 43732778  T
Q  397 ---taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaagga 493  Q
       ||||||||||||||||||||||||| ||||||||| |||||  |||||||||||||||  ||||||||||||||||||||  ||| ||||||||| |    
T  43732779 aaataaattaagtgtttttgaagtattatatgatcatttatcatattgttaattcaattttcaaaaaatcattttataatgtccgtaatttaaaaaagaa 43732878  T
Q  494 atgtaagccctcccctcc 511  Q
    | |||| |||||||||||    
T  43732879 aagtaaaccctcccctcc 43732896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 305 - 511
Target Start/End: Original strand, 30365128 - 30365339
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 399  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| | ||||||||| ||||||||||||||||||  |||||| | ||||     |||    
T  30365128 ttagggtgtgtttggattgagggtttaggaggagaaaggaggggagagttcacttttaatttttaaattacgaacaacataaaatatttttttagaataa 30365227  T
Q  400 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaa 499  Q
    |||||||||||||||||| ||| || |||||| |||||| ||||||||||||||| |||||||||||| ||||||||| ||| ||||||||| || | ||    
T  30365228 attaagtgtttttgaagtgttatataatcatttatcatgttgttaattcaattttctaaaaatcatttcataatgtctgtaatttaaaaaagaaaaggaa 30365327  T
Q  500 gccctcccctcc 511  Q
    ||||||||||||    
T  30365328 gccctcccctcc 30365339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 304 - 489
Target Start/End: Original strand, 16024150 - 16024341
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------t 397  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| ||||| ||||  ||||||||||||||||||| |||||||  ||||      |    
T  16024150 cttatggtgtgtttggattgagggtttaggaagggaagggaggggagagctcagtttttgtttttaaattacgaacaatataaaatgattttttttaaat 16024249  T
Q  398 aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaa 489  Q
    |||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||  ||| |||||||    
T  16024250 aaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaa 16024341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 310 - 536
Target Start/End: Complemental strand, 20472933 - 20472702
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaa 404  Q
    ||||||||||||||| ||||||| |||| |||||| || ||| ||||||||||||||||||||||||||||||||||  ||| ||||     ||||| ||    
T  20472933 gtgtgtttggattgaaggtttagaagggaaagggaaggaaggactcacttttattttttaaattacgaacaatgtaagttgttttttaaaaataaatcaa 20472834  T
Q  405 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccct 504  Q
    ||||||||||||||||| ||||||||  |||||  ||||||||||||||| ||||| | |||||||||||||| ||| ||||||||| || |||||||||    
T  20472833 gtgtttttgaagtattatatgatcatatatcatattgttaattcaattttctaaaatttattttataatgtctgtaatttaaaaaagaaaagtaagccct 20472734  T
Q  505 cccctcctaaaccctcttcccaaacacaccct 536  Q
     ||||| ||| ||||||  |||||||||||||    
T  20472733 tccctcttaatccctctatccaaacacaccct 20472702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 307 - 515
Target Start/End: Original strand, 9933240 - 9933454
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt------aaa 400  Q
    |||||||||||||||||| ||||||||||| ||| |||||| ||   |||||||||| ||||||||||||||||||||||||| | |||||      |||    
T  9933240 agggtgtgtttggattgaaggtttaggaggagaaaggagggaagaattcacttttatattttaaattacgaacaatgtaaaatatttttttcaaaataaa 9933339  T
Q  401 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaag 500  Q
    |||||| |||||||| ||||| ||||||||| |||||| ||||||||||||||||| |||||||||||||||||||   |  ||||||||| || ||||     
T  9933340 ttaagtatttttgaaatattatatgatcatttatcatgttgttaattcaatttttttaaaatcattttataatgtccaaattttaaaaaagaaaagtaaa 9933439  T
Q  501 ccctcccctcctaaa 515  Q
    |||||||||||||||    
T  9933440 ccctcccctcctaaa 9933454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 308 - 470
Target Start/End: Original strand, 43826333 - 43826500
Alignment:
Q  308 gggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaatt 402  Q
    |||||||||| |||||||| ||||||||||||| ||||||||| | ||| ||||||||| |||||||||||||||||||||||| ||||     ||| ||    
T  43826333 gggtgtgtttagattgaggatttaggaggggaatggaggggagagttcatttttattttgtaaattacgaacaatgtaaaatgttttttcaaaataagtt 43826432  T
Q  403 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttat 470  Q
    ||||||||||||||||||  ||||||||| |||||| ||||||||||||||| ||||||| |||||||    
T  43826433 aagtgtttttgaagtattttatgatcatttatcatgttgttaattcaattttctaaaaattattttat 43826500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 315 - 508
Target Start/End: Original strand, 34196316 - 34196514
Alignment:
Q  315 tttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt----aaat---taagtg 407  Q
    ||||||||||||| | |||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| || ||| |||||    ||||   ||||||    
T  34196316 tttggattgagggatcaggaggggaagggagggggggg-tcactttaattttttaaattacgaacaatgtgaagtgtttttttttttaaataaataagtg 34196414  T
Q  408 tttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctccc 507  Q
    |||||||||||||| |||||| || ||| || ||||||||||||||| |||||||||||||||||||||| | |||| |||||| || ||||||||||||    
T  34196415 tttttgaagtattatatgatcgtttatcttgttgttaattcaattttctaaaaatcattttataatgtctgt-aatttaaaaagaaaagtaagccctccc 34196513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 305 - 489
Target Start/End: Complemental strand, 8672040 - 8671849
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa---- 400  Q
    |||||||||||||||||||||| ||||| ||||||||| |||||| | || | |||||||||||||||||| || |||||||||||| ||||||||        
T  8672040 ttagggtgtgtttggattgaggatttagaaggggaaggtaggggatgacttaattttattttttaaattacaaataatgtaaaatgtatttttaaaataa 8671941  T
Q  401 -ttaagtgtttttgaagtattacatgatcattgat--catgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaa 489  Q
     |||||| |||||||||||||| |||||||||  |  |||  ||||||||||||||| |||||||||||||||||||||  ||| |||||||    
T  8671940 attaagtatttttgaagtattatatgatcatttttttcatattgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaa 8671849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 307 - 468
Target Start/End: Complemental strand, 9434543 - 9434377
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt------aaa 400  Q
    ||||||||||||||||||||||||| ||||| ||  || || || | ||||||||||||||||||||| |||||||||||||||| |||||      |||    
T  9434543 agggtgtgtttggattgagggtttacgaggg-aatagatggaagagttcacttttattttttaaattaggaacaatgtaaaatgttttttttttaataaa 9434445  T
Q  401 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcatttt 468  Q
    ||||||| ||||||||||||| || |||||| |||||| ||||||||||||||||||||||| |||||    
T  9434444 ttaagtggttttgaagtattatattatcatttatcatgttgttaattcaattttttaaaaattatttt 9434377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 307 - 476
Target Start/End: Complemental strand, 40633232 - 40633059
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 401  Q
    |||||||||||||||||||||||| ||| ||||||| || ||| || ||| ||||| ||||| |||||||||||| |||||||||  |||     |||||    
T  40633232 agggtgtgtttggattgagggtttcggaagggaaggaagcgga-ggttcaattttaatttttcaattacgaacaacgtaaaatgttgttttaaaataaat 40633134  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 476  Q
    |||||||||||||| ||||| |  |||||| |||||| ||||||||||||||| ||||||| |||||||||||||    
T  40633133 taagtgtttttgaaatattatacaatcatttatcatgttgttaattcaattttctaaaaattattttataatgtc 40633059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 310 - 474
Target Start/End: Original strand, 6453185 - 6453356
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttatttttt-aaattacgaacaatgtaaaatgtctttttaaa------tt 402  Q
    |||| |||||||||||||||| ||||   ||||||||||| | |||||||||||||||| |||||||||| |||||||||| | ||||| ||      ||    
T  6453185 gtgtatttggattgagggtttgggagaaaaagggaggggaagactcacttttatttttttaaattacgaataatgtaaaatattttttttaaaatatatt 6453284  T
Q  403 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatg 474  Q
    ||||||||||||||||||| ||||| | | |||||| | ||||||||||||| |||||||||||||||||||    
T  6453285 aagtgtttttgaagtattatatgattacttatcatgttattaattcaattttctaaaaatcattttataatg 6453356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 311 - 397
Target Start/End: Complemental strand, 7394701 - 7394615
Alignment:
Q  311 tgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt 397  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||| || |||||    
T  7394701 tgtgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaattacgaacaatgcaaaacgttttttt 7394615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 305 - 390
Target Start/End: Complemental strand, 43732933 - 43732848
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 390  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| |||||||||||||| ||| | |||||||    
T  43732933 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatg 43732848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 12022136 - 12022226
Alignment:
Q  301 actcttagggtgtgtttggattgagggttt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 390  Q
    |||||||||||||||| |||| |||||||| || ||||||||||||||||||||| |||||| |||||||||||||||||| | |||||||    
T  12022136 actcttagggtgtgttaggatggagggtttgagaaggggaagggaggggagggcttacttttcttttttaaattacgaacattataaaatg 12022226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 303 - 476
Target Start/End: Original strand, 29937508 - 29937676
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaatt-acgaacaatgtaaaatgtctttttaaat 401  Q
    |||||||||||||||| |||||||||||| || || |||   | |||| | ||| |||||||||||||||| | ||||||||| |||||| ||| ||||     
T  29937508 tcttagggtgtgtttgaattgagggtttaagatggaaagatggaggagagatcatttttattttttaaatttatgaacaatgtcaaatgtttttctaaaa 29937607  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 476  Q
    ||   | ||   |||||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||    
T  29937608 ta---gatt---aagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtc 29937676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 305 - 374
Target Start/End: Complemental strand, 31543318 - 31543249
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaatta 374  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  31543318 ttagggtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatta 31543249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 307 - 376
Target Start/End: Complemental strand, 1027092 - 1027023
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||||| ||||||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  1027092 agggtgtgtttggattaagggtttaggaagggaagggagggaagggttcacttttcttttttaaattacg 1027023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 8815135 - 8815224
Alignment:
Q  301 actcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 390  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||| || | || |||||| |||||||||||||| ||| | |||||||    
T  8815135 actcttagggtgtgtttggatggagggtttaggaggggaagagaggtgatgacttacttttcttttttaaattacggacattataaaatg 8815224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 2248450 - 2248521
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| | ||| |||  ||||||||||||||    
T  2248450 ttagggtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaattacg 2248521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 9718723 - 9718651
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaac 379  Q
    |||||||||||||||||||||||||||||| ||||||||||||  | | |||||| |||||||||||| ||||    
T  9718723 agggtgtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaattatgaac 9718651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 313 - 376
Target Start/End: Original strand, 1281149 - 1281212
Alignment:
Q  313 tgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||||||||||||||||||||| | ||||| | |||||| ||||||||||||||    
T  1281149 tgtttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacg 1281212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 313 - 400
Target Start/End: Complemental strand, 36309081 - 36308994
Alignment:
Q  313 tgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 400  Q
    ||||||||| |||||||||||||||||||||||||||||| | ||||||  | ||||||||||| ||| ||| |||| | ||||||||    
T  36309081 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatctttaaattacgtacattgtgaaatatatttttaaa 36308994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 300 - 374
Target Start/End: Complemental strand, 7503205 - 7503131
Alignment:
Q  300 cactcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaatta 374  Q
    |||| |||||||||||||||||||||| ||| |||||||| |||||||||||| | ||||||  |||||||||||    
T  7503205 cacttttagggtgtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaatta 7503131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 31543072 - 31543141
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||| ||||||||| ||||||||| |||||||||||||||||||| | ||||||  |||||||||||||    
T  31543072 agggtatgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattacg 31543141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 34196556 - 34196492
Alignment:
Q  302 ctcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttt 367  Q
    ||||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||| |||||    
T  34196556 ctcttagggtgcgtttggatggagggtttaggaggggaaggg-ggggagggcttacttttcttttt 34196492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 40632994 - 40633051
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcactttta 362  Q
    |||||||||||||| || ||||||||||||||||||||||| |||||||| |||||||    
T  40632994 ttagggtgtgtttgaatggagggtttaggaggggaagggagaggagggcttactttta 40633051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 307 - 375
Target Start/End: Complemental strand, 30365374 - 30365306
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    ||||||||||||||| |||| ||||| |||| ||||||||||||||||  ||||| |||||||||||||    
T  30365374 agggtgtgtttggatggaggatttagaagggtaagggaggggagggcttccttttcttttttaaattac 30365306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 7979138 - 7979209
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||| |||||||||||||||||||||| || ||||||||| |||| | | |||||| ||||||||||||||    
T  7979138 ttaggatgtgtttggattgagggtttagaagaggaagggagaggagagtttacttttcttttttaaattacg 7979209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 302 - 347
Target Start/End: Complemental strand, 2482022 - 2481977
Alignment:
Q  302 ctcttagggtgtgtttggattgagggtttaggaggggaagggaggg 347  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||    
T  2482022 ctcttagggtatgtttggatggagggtttaggaggggaagggaggg 2481977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 13404976 - 13405041
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaat 372  Q
    |||||||| ||||||||||||||||||||||||||||| |||||   | |||||| ||||||||||    
T  13404976 agggtgtggttggattgagggtttaggaggggaagggatgggagaaattacttttcttttttaaat 13405041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 331 - 376
Target Start/End: Complemental strand, 30582033 - 30581988
Alignment:
Q  331 aggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||    
T  30582033 aggaggggaagggaggggagggcttacttttcttttttaaattacg 30581988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 376
Target Start/End: Complemental strand, 34634387 - 34634318
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||| ||| |||||||||||||||||| | ||||| ||| ||||  |||||||||||||    
T  34634387 agggtgtgtttggatggagagtttaggaggggaagggatgtgagggttcattttttatttttaaattacg 34634318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 41103504 - 41103549
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggaggg 352  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  41103504 agggtgtgtttggatggagggtttaggaggggaagagaggggaggg 41103549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 372
Target Start/End: Original strand, 11033417 - 11033482
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaat 372  Q
    |||||||||||||||||||||||||||| || |||||||||||  ||| | |||||| ||||||||||    
T  11033417 ttagggtgtgtttggattgagggtttagaagaggaagggaggg--gggtttacttttcttttttaaat 11033482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 375
Target Start/End: Complemental strand, 11575646 - 11575582
Alignment:
Q  311 tgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    |||||||||||| ||||||||||| | ||||||||||||||| | ||||||  ||||||||||||    
T  11575646 tgtgtttggattcagggtttaggatgagaagggaggggagggtttacttttcatttttaaattac 11575582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 310 - 390
Target Start/End: Complemental strand, 16024394 - 16024315
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 390  Q
    |||||||||||| |||| ||||||||||||||||||||||| | | ||||||  ||||||||||||| ||| | |||||||    
T  16024394 gtgtgtttggatggaggatttaggaggggaagggaggggagagtttactttt-ctttttaaattacggacattataaaatg 16024315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 389
Target Start/End: Complemental strand, 31738669 - 31738585
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 389  Q
    ||||||||||||||||| |||||||||||||||||||  ||||||||| | |  |||  ||||||||||||| ||| | ||||||    
T  31738669 ttagggtgtgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacggacactataaaat 31738585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 305 - 344
Target Start/End: Original strand, 3726861 - 3726900
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaaggga 344  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  3726861 ttagggtgtgtttggatggagggtttaggaggggaaggga 3726900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 346
Target Start/End: Complemental strand, 4247764 - 4247725
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggagg 346  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  4247764 agggtgtgtttggattgaaggtttaggaggggaagggagg 4247725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 310 - 476
Target Start/End: Complemental strand, 24243287 - 24243118
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaa 404  Q
    |||||||||||| ||||||||| | |||||| ||||||||||||| |||||  |||| ||||||||  ||||| | | || | ||||| ||     ||||    
T  24243287 gtgtgtttggatcgagggtttaag-ggggaatggaggggagggcttactttccttttctaaattacagacaatatgagatctttttttcaaattaattaa 24243189  T
Q  405 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 476  Q
    ||||  ||||||||||| ||||||||| |||||| | ||| ||||| |||||||||  ||||||||| ||||    
T  24243188 gtgtgattgaagtattatatgatcatttatcatgttattatttcaa-tttttaaaagacattttatagtgtc 24243118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 33922521 - 33922563
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggaggggaagggag 345  Q
    ||||||||| |||||||||||||||||||||| ||||||||||    
T  33922521 tcttagggtatgtttggattgagggtttaggaagggaagggag 33922563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 11785774 - 11785725
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggaggg 352  Q
    ||||||||||||||||||| ||||||||||||||| ||| || |||||||    
T  11785774 tcttagggtgtgtttggatggagggtttaggagggtaagagaagggaggg 11785725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 28083744 - 28083781
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggagg 346  Q
    |||||||| |||||||||||||||||||||||||||||    
T  28083744 ggtgtgttcggattgagggtttaggaggggaagggagg 28083781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 311 - 396
Target Start/End: Original strand, 30479721 - 30479806
Alignment:
Q  311 tgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 396  Q
    ||||||||||| |||| ||||||||||| | ||||||||| | ||||||||  ||||||||||||  ||| | | |||||||||||    
T  30479721 tgtgtttggatggaggatttaggagggggatggaggggagagttcacttttcatttttaaattacagacactatgaaatgtctttt 30479806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 304 - 375
Target Start/End: Original strand, 2412961 - 2413027
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    ||||| |||||||||||| |||||||||||||||||     |||||||||| ||| || |||||||||||||    
T  2412961 cttagagtgtgtttggatggagggtttaggagggga-----ggggagggcttactattcttttttaaattac 2413027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 342
Target Start/End: Original strand, 6315066 - 6315101
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagg 342  Q
    |||||||||||||||||||||||||||||| |||||    
T  6315066 agggtgtgtttggattgagggtttaggaggcgaagg 6315101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 10028369 - 10028298
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||| ||||||||||  ||||||||||||| ||||| |||||||||| | ||||||   ||||||||||||    
T  10028369 ttaggatgtgtttggacagagggtttaggagaggaagtgaggggagggtttactttttacttttaaattacg 10028298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 302 - 376
Target Start/End: Original strand, 10028105 - 10028179
Alignment:
Q  302 ctcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||| ||| ||||||||||| |||||||||||||||||  ||||| |||   | |||||| ||||||||||||||    
T  10028105 ctctaaggatgtgtttggatcgagggtttaggaggggataggaggtgagattttacttttcttttttaaattacg 10028179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 30479959 - 30479897
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaa 371  Q
    ||||||||||||||||||||||| ||| |||| |||| |||||| | | |||| |||||||||    
T  30479959 ggtgtgtttggattgagggtttatgagaggaatggagcggagggtttagttttcttttttaaa 30479897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 305 - 335
Target Start/End: Complemental strand, 37032626 - 37032596
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggag 335  Q
    |||||||||||||||||||||||||||||||    
T  37032626 ttagggtgtgtttggattgagggtttaggag 37032596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 36308847 - 36308884
Alignment:
Q  302 ctcttagggtgtgtttggattgagggtttaggagggga 339  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  36308847 ctcttagggtgtgtttggattaagggtttgggagggga 36308884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 460
Target Start/End: Complemental strand, 38198196 - 38198135
Alignment:
Q  399 aattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaa 460  Q
    ||||||||||  ||||||||||| ||||||||  |||||| ||||| |||||||||| ||||    
T  38198196 aattaagtgtgattgaagtattatatgatcatatatcatgttgttatttcaatttttaaaaa 38198135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 376
Target Start/End: Complemental strand, 40990427 - 40990359
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||||||||| ||||||| |||||||||| ||| | |   |||| ||||||||||||||    
T  40990427 agggtgtgtttggattgaggg-ttaggagaggaagggaggagagagtttgtttttcttttttaaattacg 40990359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 7502964 - 7502996
Alignment:
Q  307 agggtgtgtttggattgagggtttaggagggga 339  Q
    |||||||||||||||||||||||| ||||||||    
T  7502964 agggtgtgtttggattgagggtttgggagggga 7502996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 9718489 - 9718521
Alignment:
Q  307 agggtgtgtttggattgagggtttaggagggga 339  Q
    ||||||||||||||| |||||||||||||||||    
T  9718489 agggtgtgtttggatggagggtttaggagggga 9718521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 16652958 - 16652994
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaaggg 343  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  16652958 agggtgtgtttggattgagggttttggagggggaggg 16652994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 399 - 443
Target Start/End: Original strand, 27487087 - 27487131
Alignment:
Q  399 aattaagtgtttttgaagtattacatgatcattgatcatgctgtt 443  Q
    ||||||||||| ||||||||||| ||||||||| |||||| ||||    
T  27487087 aattaagtgttattgaagtattatatgatcatttatcatgttgtt 27487131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 8e-72; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 307 - 511
Target Start/End: Original strand, 10204576 - 10204785
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 401  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||     |||||    
T  10204576 agggtgtgtttggatcgagggtttaggaggggaagggaggtgagggctcacttttattttttaaattaccaacaatgtaaaatgtctttttaaaataaat 10204675  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 501  Q
    |||||||||||||||||||| ||||||||| || | | ||||||||||||||||||||||||||||| |||||||| ||||||||||||| || |||||     
T  10204676 taagtgtttttgaagtattatatgatcatttattacgttgttaattcaattttttaaaaatcattttttaatgtctgtaaattaaaaaagaaaagtaagt 10204775  T
Q  502 cctcccctcc 511  Q
    ||||||||||    
T  10204776 cctcccctcc 10204785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 307 - 511
Target Start/End: Complemental strand, 15986868 - 15986659
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 401  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||     |||||    
T  15986868 agggtgtgtttggattgagggtttaggaggggaaggaagaggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaaataaat 15986769  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 501  Q
    ||||||||||| |||||||| |||||||||    ||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||  ||||     
T  15986768 taagtgtttttaaagtattatatgatcattttaaatgttgttaattcaattttttaaaagtcattttataatgtctgtaaattaaaaaagaaaattaagt 15986669  T
Q  502 cctcccctcc 511  Q
    ||||||||||    
T  15986668 cctcccctcc 15986659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 307 - 536
Target Start/End: Complemental strand, 40305909 - 40305670
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 401  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||| |||||||||||||||||||| ||||||||||||| ||||     |||||    
T  40305909 agggtgtgtttggattgagggtttaggaggagaagggaggggagaactcatttttattttttaaattacgaccaatgtaaaatgttttttcaaaataaat 40305810  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 501  Q
    |||| |||||||||||| || ||||||||| |||||  ||||||||||||||| ||||||| |||||||||||||| ||| ||||||||| ||  |||||    
T  40305809 taagggtttttgaagtactatatgatcatttatcatattgttaattcaattttctaaaaattattttataatgtctgtaatttaaaaaagaaaactaagc 40305710  T
Q  502 cc-----tcccctcctaaaccctcttcccaaacacaccct 536  Q
    ||     |||||||||||||||||   |||||||||||||    
T  40305709 cctcccttcccctcctaaaccctccatccaaacacaccct 40305670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 309 - 536
Target Start/End: Complemental strand, 8551660 - 8551427
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaatta 403  Q
    |||||||||||||||| |||||||||||||||| |||||| || ||||||||||||||||||||||||| ||||||||||||| ||||     |||||||    
T  8551660 ggtgtgtttggattgaaggtttaggaggggaagagagggggggtctcacttttattttttaaattacgagcaatgtaaaatgtgttttaaaaataaatta 8551561  T
Q  404 agtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccc 503  Q
    ||||||||| |||||||| ||||||||| || ||| |||||||| ||||||||||||||||||||||||||||| ||  |||| |||  ||||||| |||    
T  8551560 agtgtttttaaagtattatatgatcatttataatgttgttaatttaattttttaaaaatcattttataatgtctgtagtttaagaaataaatgtaaaccc 8551461  T
Q  504 -tcccctcctaaaccctcttcccaaacacaccct 536  Q
     | ||||  ||||||||||  |||||||||||||    
T  8551460 tttccctattaaaccctctatccaaacacaccct 8551427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 307 - 511
Target Start/End: Complemental strand, 33744437 - 33744228
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 401  Q
    ||||||| |||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||  ||||||| ||||     |||||    
T  33744437 agggtgtatttggattgagggtttaggagatgaagggaggggagggctcacttttatattttaaattacgaacaattcaaaatgtttttttaaaataaat 33744338  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 501  Q
    ||||||||||||||| | || ||||||||| |||||| |||||||||||||||  ||||||||||||||||||||  ||| ||||||||| || |||| |    
T  33744337 taagtgtttttgaagaaatatatgatcatttatcatgttgttaattcaattttcaaaaaatcattttataatgtccataatttaaaaaagaaaagtaaac 33744238  T
Q  502 cctcccctcc 511  Q
    ||||||||||    
T  33744237 cctcccctcc 33744228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 309 - 511
Target Start/End: Original strand, 34980812 - 34981019
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaatta 403  Q
    |||||||||||||||| |||||||||||||||||||||| |||| ||||||||| |||||||||||||||||| ||||||| | ||||     |||||||    
T  34980812 ggtgtgtttggattgaaggtttaggaggggaagggagggaagggttcacttttaatttttaaattacgaacaacgtaaaatatttttttaaaataaatta 34980911  T
Q  404 agtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccc 503  Q
    |||||||||||||||||| || |||||| |||||| |||||| |||||||| || ||||||||||||||||||  ||| ||||||||| || ||||| ||    
T  34980912 agtgtttttgaagtattatataatcatttatcatgttgttaactcaattttctataaatcattttataatgtccataatttaaaaaagaaaagtaagtcc 34981011  T
Q  504 tcccctcc 511  Q
    ||||||||    
T  34981012 tcccctcc 34981019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 307 - 511
Target Start/End: Original strand, 10043252 - 10043461
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt-----aaat 401  Q
    ||||||| ||| |||||| |||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |  ||||     ||||    
T  10043252 agggtgtatttagattgatggtttatgaggggaagggaggggatgactcacttttattttttaaattacgaacaatgtaaaatattgttttaaaagaaat 10043351  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 501  Q
    |||||||||||||||||||| ||||| ||| || ||| ||||||||||||||| |||||||||||||||||| |   ||| ||||||||| || || ||     
T  10043352 taagtgtttttgaagtattatatgattatttataatgttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtgagt 10043451  T
Q  502 cctcccctcc 511  Q
    ||||||||||    
T  10043452 cctcccctcc 10043461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 305 - 490
Target Start/End: Original strand, 21580945 - 21581135
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 399  Q
    ||||||||| ||||||||| |||||| |||| | |||||||||||||| ||||||||||||| |||||||||||||||||||||| | ||||     |||    
T  21580945 ttagggtgtatttggattgggggttttggagagaaagggaggggaggggtcacttttattttctaaattacgaacaatgtaaaatatttttttaaaataa 21581044  T
Q  400 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaa 490  Q
    |||||||||||||||||||| | |||| |||| |||||| ||||||||||||||| ||||||| |||| |||| |||  ||| ||||||||    
T  21581045 attaagtgtttttgaagtatcatatgaacatttatcatgttgttaattcaattttctaaaaattatttcataacgtccataatttaaaaaa 21581135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 342 - 461
Target Start/End: Original strand, 5688448 - 5688572
Alignment:
Q  342 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaa-----attaagtgtttttgaagtattacatgatcattgatca 436  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||     |||||||||||||||||||||| || |||||  ||||    
T  5688448 ggaggggagggttcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaatagattaagtgtttttgaagtattatatcatcatcaatca 5688547  T
Q  437 tgctgttaattcaattttttaaaaa 461  Q
    || ||||||||||||||| ||||||    
T  5688548 tgttgttaattcaattttctaaaaa 5688572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 14245083 - 14245177
Alignment:
Q  302 ctcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 396  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  | |||||| |||||||||||||| ||| ||| |||||| ||||    
T  14245083 ctctaagggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacggacactgtgaaatgtttttt 14245177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 308 - 380
Target Start/End: Complemental strand, 13634954 - 13634882
Alignment:
Q  308 gggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaaca 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||  |||||||||||||||||    
T  13634954 gggtgtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacgaaca 13634882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 7544136 - 7544205
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  7544136 agggtgtgtttggattgagggtttaggaagggaagggaggggagggctaaattttcttttttaaattacg 7544205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 13634711 - 13634776
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaat 372  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||    
T  13634711 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaat 13634776  T

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Target: chr5; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 302 - 391
Target Start/End: Complemental strand, 14245295 - 14245206
Alignment:
Q  302 ctcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgt 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||  ||||||||||||| ||| ||| ||||||    
T  14245295 ctcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacggacactgtgaaatgt 14245206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 309 - 396
Target Start/End: Complemental strand, 1658055 - 1657968
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 396  Q
    ||||||||||||| |||||||||||||||||||||||||||||| | ||||||  ||||||||||||| ||| | |||||||| ||||    
T  1658055 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacggacactataaaatgtttttt 1657968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 397 - 500
Target Start/End: Original strand, 6382422 - 6382525
Alignment:
Q  397 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatg 496  Q
    |||||||||| |||||||||||| |||||| |||| |||||| ||||||||||||||| ||||||  |||||||||||||  ||||||| ||||| || |    
T  6382422 taaattaagtctttttgaagtatcacatgaacatttatcatgttgttaattcaattttctaaaaagtattttataatgtccgtaaattagaaaagaaaag 6382521  T
Q  497 taag 500  Q
    ||||    
T  6382522 taag 6382525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 307 - 471
Target Start/End: Original strand, 11436939 - 11437108
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaa------atgtctttttaaa 400  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| |||||  |||||||||||||| ||||| || |      || | ||||||||    
T  11436939 agggcgtgtttggattgagggtttaggaggggaagggagaggagggcttactttccttttttaaattacggacaatatatatattttatttatttttaaa 11437038  T
Q  401 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttata 471  Q
    | ||  ||  ||||||||||| | ||||||| |||  ||||||| || ||||||||||||| |||||||||    
T  11437039 taaac-gtgattgaagtattatacgatcatttatcgcgctgttattttaattttttaaaaaacattttata 11437108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 303 - 389
Target Start/End: Complemental strand, 15858988 - 15858902
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 389  Q
    |||||||||||||||| ||||||| ||| ||||| |||||||||||| | ||||| |||||||| |||||||||||||||| |||||    
T  15858988 tcttagggtgtgtttgaattgaggctttgggaggtgaagggaggggatgactcacatttattttctaaattacgaacaatggaaaat 15858902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 26414893 - 26414962
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| | ||||||  |||||||||||||    
T  26414893 agggtgtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattacg 26414962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 305 - 377
Target Start/End: Complemental strand, 10476274 - 10476202
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacga 377  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| | | |||| || ||||||||||||||    
T  10476274 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagtgtttacttataatttttaaattacga 10476202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 311 - 370
Target Start/End: Complemental strand, 2550592 - 2550533
Alignment:
Q  311 tgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaa 370  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||    
T  2550592 tgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaa 2550533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 306 - 397
Target Start/End: Complemental strand, 14684729 - 14684638
Alignment:
Q  306 tagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt 397  Q
    ||||||||||||||||| ||||||||||||||| || ||| |||||||| |||||| |||||| |||||||  |||| |||||||| |||||    
T  14684729 tagggtgtgtttggatttagggtttaggaggggcagagagaggagggcttacttttctttttttaattacgggcaatataaaatgttttttt 14684638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 305 - 352
Target Start/End: Original strand, 16938477 - 16938524
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggaggg 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16938477 ttagggtgtgtttggattgagggtttaggaggggaagggaggggaggg 16938524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 15986619 - 15986713
Alignment:
Q  302 ctcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 396  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| || | |||| |||||||| ||||  ||| | ||||||| |||||    
T  15986619 ctcttagggtgtgtttggaaagagggtttaggaggggaagggaggggaggacttaattttcttttttaatttacagacattataaaatgactttt 15986713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 302 - 351
Target Start/End: Complemental strand, 5688639 - 5688590
Alignment:
Q  302 ctcttagggtgtgtttggattgagggtttaggaggggaagggaggggagg 351  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5688639 ctcttagggtgtgtttggattgagggtttaggaggggaagggaagggagg 5688590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 312 - 396
Target Start/End: Complemental strand, 36363271 - 36363187
Alignment:
Q  312 gtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 396  Q
    |||||||||| |||||||||||||||||||||||| ||| | ||||||||  ||||||||||||| | | | |||||||||||||    
T  36363271 gtgtttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattacggatactataaaatgtctttt 36363187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 349 - 491
Target Start/End: Complemental strand, 6597984 - 6597845
Alignment:
Q  349 agggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaattaagtgtttttgaagtattacatgatcattgatcatgctgtta 444  Q
    |||||||| ||||||||||||||||| ||| |||||||||| | ||||    ||||||||||||       |||||| ||||||||| |||||| |||||    
T  6597984 agggctcatttttattttttaaattatgaataatgtaaaatattttttaaaataaattaagtgt-------gtattatatgatcatttatcatgttgtta 6597892  T
Q  445 attcaattttttaaaaatcattttataatgtctttaaattaaaaaag 491  Q
     |||||||||  ||||||||||||| ||||||  ||| |||||||||    
T  6597891 tttcaattttcaaaaaatcattttacaatgtccgtaatttaaaaaag 6597845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 304 - 375
Target Start/End: Complemental strand, 10204823 - 10204752
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    |||||||||||||||||  ||| ||||||||||||||||||||||||| || |||||| |||||||| ||||    
T  10204823 cttagggtgtgtttggaaagagagtttaggaggggaagggaggggaggacttacttttcttttttaatttac 10204752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 374
Target Start/End: Complemental strand, 34981058 - 34980987
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaatta 374  Q
    |||||||||||||||  || ||||||||| ||||||||||||||||||| || |||||| ||||||||||||    
T  34981058 tcttagggtgtgttttaatggagggtttaagaggggaagggaggggaggacttacttttcttttttaaatta 34980987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 399 - 500
Target Start/End: Complemental strand, 10043156 - 10043055
Alignment:
Q  399 aattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgta 498  Q
    |||||||||||||| |||||||| ||||||||| |||||| ||||||||||||||| || |||| ||| | |||||| | ||| |||| |||| || |||    
T  10043156 aattaagtgtttttaaagtattatatgatcatttatcatgttgttaattcaattttctagaaataattctttaatgtttataatttaagaaagaaaagta 10043057  T
Q  499 ag 500  Q
    ||    
T  10043056 ag 10043055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 305 - 374
Target Start/End: Original strand, 33744191 - 33744260
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaatta 374  Q
    ||||||||||||||||| ||||||| ||| || ||||||||||||||| | |||||| ||||||||||||    
T  33744191 ttagggtgtgtttggatggagggttaaggcggagaagggaggggagggtttacttttcttttttaaatta 33744260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 314 - 378
Target Start/End: Complemental strand, 10043489 - 10043425
Alignment:
Q  314 gtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaa 378  Q
    |||||||||||  ||||||||||  ||||||||||||| ||||||||| ||||||||||||||||    
T  10043489 gtttggattgattgtttaggaggaaaagggaggggaggactcacttttcttttttaaattacgaa 10043425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 10476026 - 10476090
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaa 371  Q
    |||||||||||| ||||||||||||||||||||||||| | ||||| | |||||| |||||||||    
T  10476026 agggtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaa 10476090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 20147114 - 20147074
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggg 347  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20147114 agggtgtgtttggattgagggtttaggaggggaagggaggg 20147074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 40305667 - 40305710
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggg 347  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  40305667 cttagggtgtgtttggatggagggtttaggaggggaagggaggg 40305710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 305 - 438
Target Start/End: Complemental strand, 4373812 - 4373674
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 399  Q
    |||||||||||||||||||||||||||||| |||||   || |||||  | |||||| |||||||||||||| || || ||| | || ||||     |||    
T  4373812 ttagggtgtgtttggattgagggtttaggaagggaaaatagtggaggatttacttttcttttttaaattacggactatataacaagttttttaaaaataa 4373713  T
Q  400 attaagtgtttttgaagtattacatgatcattgatcatg 438  Q
    |||||||||  ||||| ||||| ||||||||| ||||||    
T  4373712 attaagtgtgattgaaatattatatgatcatttatcatg 4373674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 305 - 379
Target Start/End: Original strand, 11756876 - 11756949
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaac 379  Q
    ||||| |||||||||||||||||||||||||||| ||||| ||||| | |   ||||||||||||||||||||||    
T  11756876 ttaggatgtgtttggattgagggtttaggagggg-agggatgggagagtttgtttttattttttaaattacgaac 11756949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 12035936 - 12036018
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 389  Q
    ||||||||||||||| || |||||||||||||||||||| ||||| ||   |||| |||||||||||| ||||| | ||||||    
T  12035936 agggtgtgtttggatagatggtttaggaggggaagggagaggaggacttgtttttcttttttaaattatgaacattataaaat 12036018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 475
Target Start/End: Complemental strand, 12036084 - 12036007
Alignment:
Q  397 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgt 475  Q
    |||||||||||||||| |||||||| ||||| ||| |||||| || |||||||||||| ||| ||| ||||||||||||    
T  12036084 taaattaagtgttttttaagtattatatgataatttatcatgttg-taattcaattttctaataataattttataatgt 12036007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 396
Target Start/End: Complemental strand, 11437188 - 11437094
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggag---ggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 396  Q
    ||||||||| |||||||||||||||||| ||||||||||| |||||   | || |||||| ||||||||| || ||||| | |||||||| ||||    
T  11437188 ttagggtgtttttggattgagggtttagaaggggaagggaagggaggacgacttacttttcttttttaaaataggaacactataaaatgtttttt 11437094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 309 - 376
Target Start/End: Complemental strand, 16502034 - 16501966
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggagggg-agggctcacttttattttttaaattacg 376  Q
    ||||||||||||||||||||||||||||| ||| |||||| ||   | |||||||||||||||||||||    
T  16502034 ggtgtgtttggattgagggtttaggagggaaagagagggggagaaattacttttattttttaaattacg 16501966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 489
Target Start/End: Complemental strand, 28279728 - 28279533
Alignment:
Q  300 cactcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt--- 396  Q
    |||||| ||||||||||||||||||| || ||  ||||||||||||| ||||| | ||||||  ||||||||||| | |  || ||| |||| ||||       
T  28279728 cactctaagggtgtgtttggattgagagtctataaggggaagggaggagagggtttacttttcctttttaaattatggaatatataacatgttttttcta 28279629  T
Q  397 ---taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaa 489  Q
       |||| |||||||  ||||||||||| ||||||||| |||||| |  ||  | || |||||||||| ||||| ||||||||  ||| |||||||    
T  28279628 aaataaactaagtgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcataatgtccataatttaaaaa 28279533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 375
Target Start/End: Original strand, 40815297 - 40815365
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    |||||||||||||||||| | ||||||||||||||||| | ||||  | |||||| |||||||||||||    
T  40815297 agggtgtgtttggattgaagatttaggaggggaagggaagagaggatttacttttcttttttaaattac 40815365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 304 - 368
Target Start/End: Original strand, 42681445 - 42681509
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttatttttt 368  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||||||  | |||||| ||||||    
T  42681445 cttaaggtgtgtttggattgagggtttaagaggggaaaggaggggaggatttacttttttttttt 42681509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 309 - 352
Target Start/End: Complemental strand, 7544378 - 7544335
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggaggg 352  Q
    ||||||||||||| |||||||||||||||||||| |||||||||    
T  7544378 ggtgtgtttggatggagggtttaggaggggaaggaaggggaggg 7544335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 11757144 - 11757102
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggaggg 352  Q
    |||||||||||| ||||||||| ||||||||||||||||||||    
T  11757144 gtgtgtttggatggagggtttaagaggggaagggaggggaggg 11757102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 348
Target Start/End: Complemental strand, 21581188 - 21581150
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggagggg 348  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  21581188 gtgtgtttggatggagggtttaggaggggaagggagggg 21581150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 351
Target Start/End: Original strand, 22022849 - 22022891
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagg 351  Q
    |||||||||||||||||||||||||||||||| ||||| ||||    
T  22022849 ggtgtgtttggattgagggtttaggaggggaatggaggagagg 22022891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 8502835 - 8502904
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||| || |||||| || ||||| ||| ||||||| ||||||||  |||||||||||||    
T  8502835 agggtgtgtttggatggatggtttatgaagggaatggatgggagggttcacttttcatttttaaattacg 8502904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 342
Target Start/End: Complemental strand, 8503079 - 8503038
Alignment:
Q  301 actcttagggtgtgtttggattgagggtttaggaggggaagg 342  Q
    ||||||||||||||||||||||||||||||| ||| ||||||    
T  8503079 actcttagggtgtgtttggattgagggtttatgagaggaagg 8503038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 311 - 384
Target Start/End: Complemental strand, 12036177 - 12036105
Alignment:
Q  311 tgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgt 384  Q
    |||||||| ||||||| |||||||| ||||  |||||||| | | |||||||| ||||||||||||||||||||    
T  12036177 tgtgtttgtattgaggatttaggagaggaaatgaggggagagtttacttttat-ttttaaattacgaacaatgt 12036105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 16938723 - 16938678
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggaggg 352  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||    
T  16938723 agggtgtgtttggatggagggtttaggagaggaatggaggggaggg 16938678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 353 - 389
Target Start/End: Original strand, 6382357 - 6382393
Alignment:
Q  353 ctcacttttattttttaaattacgaacaatgtaaaat 389  Q
    |||||||||||||||||||| ||||||||||||||||    
T  6382357 ctcacttttattttttaaatcacgaacaatgtaaaat 6382393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 9856890 - 9856922
Alignment:
Q  307 agggtgtgtttggattgagggtttaggagggga 339  Q
    |||||||||||||||||||||||||||||||||    
T  9856890 agggtgtgtttggattgagggtttaggagggga 9856922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 310 - 342
Target Start/End: Original strand, 14681473 - 14681505
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagg 342  Q
    |||||||||||||||||||||||||||||||||    
T  14681473 gtgtgtttggattgagggtttaggaggggaagg 14681505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 22023607 - 22023571
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggagggga 339  Q
    ||||||||||||||||||| |||||||||||||||||    
T  22023607 tcttagggtgtgtttggatggagggtttaggagggga 22023571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 10650660 - 10650589
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||||||||  |||| ||||||||||||||| ||  | | ||||||  |||||||||||||    
T  10650660 ttagggtgtgtttggattgaaagtttgggaggggaagggaggagaaagtttactttttgtttttaaattacg 10650589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 304 - 371
Target Start/End: Complemental strand, 37551652 - 37551585
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaa 371  Q
    |||||||||||||||||| ||||||||| ||||| ||||||| ||| || | ||||||  ||||||||    
T  37551652 cttagggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaa 37551585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 304 - 371
Target Start/End: Complemental strand, 37654482 - 37654415
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaa 371  Q
    |||||||||||||||||| ||||||||| ||||| ||||||| ||| || | ||||||  ||||||||    
T  37654482 cttagggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaa 37654415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 305 - 391
Target Start/End: Complemental strand, 2184060 - 2183974
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgt 391  Q
    ||||||||||||||||| ||||||||| |||||||||  ||  ||||||| | ||||  | ||||||||||| ||| | ||||||||    
T  2184060 ttagggtgtgtttggatggagggtttaagaggggaagatagaagagggcttatttttcctctttaaattacggacattataaaatgt 2183974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 350
Target Start/End: Original strand, 36363037 - 36363075
Alignment:
Q  312 gtgtttggattgagggtttaggaggggaagggaggggag 350  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  36363037 gtgtttggattgagggtttagaaggggaatggaggggag 36363075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 307 - 341
Target Start/End: Complemental strand, 36392393 - 36392359
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaag 341  Q
    |||| ||||||||||||||||||||||||||||||    
T  36392393 agggcgtgtttggattgagggtttaggaggggaag 36392359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 376
Target Start/End: Complemental strand, 20513681 - 20513612
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||||||||||||||||| | |||  || || |||  | |||||| ||||||||||||||    
T  20513681 agggtgtgtttggattgagggtttaggaagcgaaaagaaggaaggatttacttttcttttttaaattacg 20513612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 345
Target Start/End: Complemental strand, 37607141 - 37607100
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggag 345  Q
    |||||||||||||||||| ||||||||| ||||| |||||||    
T  37607141 cttagggtgtgtttggatggagggtttacgagggaaagggag 37607100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 345
Target Start/End: Complemental strand, 37779350 - 37779309
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggag 345  Q
    |||||||||||||||||| ||||||||| ||||| |||||||    
T  37779350 cttagggtgtgtttggatggagggtttacgagggaaagggag 37779309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 12600743 - 12600703
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggag 350  Q
    ||||||||||||| | |||||||||||||||| ||||||||    
T  12600743 gtgtgtttggatttaaggtttaggaggggaagagaggggag 12600703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 336
Target Start/End: Complemental strand, 13298509 - 13298477
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggagg 336  Q
    |||||||||||||||||| ||||||||||||||    
T  13298509 cttagggtgtgtttggatagagggtttaggagg 13298477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 5e-67; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 307 - 511
Target Start/End: Original strand, 33519048 - 33519257
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt-----aaat 401  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||     ||||    
T  33519048 agggagtgtttggatggaggttttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatataaaatgtttttttgaaataaat 33519147  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 501  Q
    |||||||||||||||||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||| ||||| ||| || |||| |    
T  33519148 taagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtctgtaatttaaagaagaaaagtaatc 33519247  T
Q  502 cctcccctcc 511  Q
    ||||||||||    
T  33519248 cctcccctcc 33519257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 301 - 476
Target Start/End: Original strand, 37925835 - 37926015
Alignment:
Q  301 actcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 400  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||    
T  37925835 actctaagggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattacgaacaatgtaaaatgttttttttaa 37925934  T
Q  401 -----ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 476  Q
         ||||||||||||||||||||| || |||||  |||||| ||||||||||||||| |||| ||||||||||||||||    
T  37925935 atagattaagtgtttttgaagtattatatcatcatcaatcatgttgttaattcaattttctaaacatcattttataatgtc 37926015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 307 - 511
Target Start/End: Complemental strand, 36267797 - 36267588
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 401  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||| ||||     || |     
T  36267797 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcatttttattttttaaattacaaccaatgtaaaatgttttttcaaaatatag 36267698  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 501  Q
    |||||||||||||||||||| ||||||||| |||||  |||| |||||||||| |||||||||||||||||| ||  ||| ||||||||| ||  |||||    
T  36267697 taagtgtttttgaagtattatatgatcatttatcatattgttgattcaattttctaaaaatcattttataatatccgtaatttaaaaaagaaaactaagc 36267598  T
Q  502 cctcccctcc 511  Q
    ||||||||||    
T  36267597 cctcccctcc 36267588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 305 - 520
Target Start/End: Original strand, 39646467 - 39646687
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 399  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||  ||||||||||||||||||||| |||||||||||||| | ||||     |||    
T  39646467 ttagggtgtgtttggattgacggtttaggagaggaagggaggggaggaatcacttttattttttaaattatgaacaatgtaaaatatatttttaaaataa 39646566  T
Q  400 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaa 499  Q
    ||||| |||||||||||||||| || |||||  |||||| ||||||||||||||| |||||||||||||||||||||  ||| ||||||||  || || |    
T  39646567 attaactgtttttgaagtattatatcatcatcaatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaataaaagtga 39646666  T
Q  500 gccctcccctcctaaaccctc 520  Q
    | | |||||||||||||||||    
T  39646667 gtcatcccctcctaaaccctc 39646687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 305 - 491
Target Start/End: Complemental strand, 28074354 - 28074158
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattt--tttaaattacgaacaatgtaaaatgtctttt------ 396  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||  ||| ||| |||||||||||||||||| ||||          
T  28074354 ttagggtgtgtttggattgagggtttaggagaggaaggaaggggagggatcacttttatttatttttaatcacgaacaatgtaaaatgttttttgtttta 28074255  T
Q  397 --taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 491  Q
      ||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||| |||||||||||||||||||||  ||| |||||||||    
T  28074254 aataaattaagtgtttttgaagtattatatgatcatttatcaggttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaag 28074158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 324 - 539
Target Start/End: Original strand, 48013520 - 48013740
Alignment:
Q  324 agggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagta 418  Q
    ||||||||||||||||||||||||||| | || ||||||||||| ||||||||||||||||||||||| ||||||||     |||||||||||||||  |    
T  48013520 agggtttaggaggggaagggaggggagcgttcgcttttattttt-aaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaaaaa 48013618  T
Q  419 tt-acatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaacc 517  Q
    || | ||||||||| |||||| ||||||||||||||| ||||||| ||||||||| |||| | | ||||||| | || |||||| |||||||||||| ||    
T  48013619 ttcatatgatcatttatcatgttgttaattcaattttctaaaaattattttataaagtctgtgatttaaaaacgaaaagtaagctctcccctcctaatcc 48013718  T
Q  518 ctcttcccaaacacacccttaa 539  Q
    |||   ||||||||||||||||    
T  48013719 ctccatccaaacacacccttaa 48013740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 304 - 511
Target Start/End: Original strand, 37620771 - 37620983
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----ta 398  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||| | ||||||||  |||| |||||| |||||||||||||||  ||||     ||    
T  37620771 cttaaggtgtgtttggattgagggtttgggaggggaagggaggggagagttcactttttattttcaaattatgaacaatgtaaaatgattttttaaaata 37620870  T
Q  399 aattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgta 498  Q
    |||||| |||||||||||||||| || ||| || |||||| || ||||||||||||  ||||||||||||||||||||  ||| ||||||||| || | |    
T  37620871 aattaaatgtttttgaagtattatataatcttttatcatgttgataattcaattttccaaaaatcattttataatgtccataatttaaaaaagaaaagca 37620970  T
Q  499 agccctcccctcc 511  Q
    | |||||||||||    
T  37620971 aaccctcccctcc 37620983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 310 - 506
Target Start/End: Original strand, 35421967 - 35422168
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaa 404  Q
    ||||||||||||||||| |||| |||| ||||||||  || | || | |||||||||||||||||| ||||||||||||||| ||||||||     ||||    
T  35421967 gtgtgtttggattgaggatttaagaggtgaagggagaagatgacttatttttattttttaaattacaaacaatgtaaaatgtttttttaaaataaattaa 35422066  T
Q  405 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccct 504  Q
    ||||||||||||||| | ||||| ||| || ||| ||||||||||||||| ||||||| |||||||||||||  ||| || |||||| || |||| ||||    
T  35422067 gtgtttttgaagtatcatatgattatttattatgttgttaattcaattttctaaaaattattttataatgtccgtaattttaaaaagaaaagtaaaccct 35422166  T
Q  505 cc 506  Q
    ||    
T  35422167 cc 35422168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 310 - 516
Target Start/End: Original strand, 21857350 - 21857560
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaa 404  Q
    |||||||||||| || ||||||| ||||||||||||  ||| | ||| ||||||||||||||||| ||||||| ||||||   ||||||||     ||||    
T  21857350 gtgtgtttggatcgaaggtttagaaggggaagggagtagagagttcatttttattttttaaattaagaacaatataaaatccttttttaaaataaattaa 21857449  T
Q  405 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccct 504  Q
    ||||||||||| ||||  ||||||||| |||||| ||||||||||||||| |||||||||||||||||||| |   |||||||| || || ||||| |||    
T  21857450 gtgtttttgaaatattgtatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgt-tcgtaattaaaagagaaaagtaagtcct 21857548  T
Q  505 cccctcctaaac 516  Q
    | ||||||||||    
T  21857549 ctcctcctaaac 21857560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 310 - 511
Target Start/End: Complemental strand, 31364285 - 31364080
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttt------tattttttaaattacgaacaatgtaaaatgtctttttaaatta 403  Q
    |||||||||||||||||||||||||||||||||||||  |||| | |||||      |||||||||||||| |||||||||||||||| |||||||| ||    
T  31364285 gtgtgtttggattgagggtttaggaggggaagggagg--agggtttactttattttttattttttaaattaggaacaatgtaaaatgtttttttaaaata 31364188  T
Q  404 a---gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaag 500  Q
    |   ||||||||||||||||| ||||||||   | |||  ||| |||||||||| | |||||||||||||||||||  ||| ||| ||||| || |||||    
T  31364187 agttgtgtttttgaagtattatatgatcat---ttatgtcgttgattcaattttcttaaaatcattttataatgtccgtaatttagaaaagaaaagtaag 31364091  T
Q  501 ccctcccctcc 511  Q
    | |||||||||    
T  31364090 ctctcccctcc 31364080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 307 - 511
Target Start/End: Complemental strand, 48881793 - 48881593
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa------ 400  Q
    ||||||||||||||||||||||||||||||||||||           ||||||||| |||||||||||| ||||| ||||||||| ||||||||          
T  48881793 agggtgtgtttggattgagggtttaggaggggaaggt----------tcacttttaatttttaaattacaaacaacgtaaaatgtttttttaaaaataaa 48881704  T
Q  401 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaag 500  Q
    |||||| ||||||||| |||| || |||||| |||||| ||||||||||||||| | ||||| |||||||||||||  ||| ||||||||| || |||||    
T  48881703 ttaagtatttttgaagcattatataatcatttatcatgttgttaattcaattttctgaaaattattttataatgtccgtaatttaaaaaagaaaagtaag 48881604  T
Q  501 ccctcccctcc 511  Q
    || ||||||||    
T  48881603 ccatcccctcc 48881593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 308 - 454
Target Start/End: Complemental strand, 12671079 - 12670928
Alignment:
Q  308 gggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaatt 402  Q
    ||||||||||||||||||| |||||||| | ||  ||||| | | ||||||||||||||||||| |||||||||||| |||||| ||||     | ||||    
T  12671079 gggtgtgtttggattgaggttttaggagtgaaacagagggaaagactcacttttattttttaaactacgaacaatgtgaaatgttttttgtaaatgaatt 12670980  T
Q  403 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaatttt 454  Q
    ||||||||||||||||||| ||||||||| |||||| |||||||||||||||    
T  12670979 aagtgtttttgaagtattatatgatcatttatcatgttgttaattcaatttt 12670928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 305 - 482
Target Start/End: Original strand, 8122142 - 8122328
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 399  Q
    |||||||||||||| ||||||  ||||||||| |||||||||||| | ||||||||||||||||||||||||||| || |||||| |  |||     |||    
T  8122142 ttagggtgtgtttgaattgagaatttaggaggagaagggaggggaagactcacttttattttttaaattacgaaccatataaaatattgttttaaaataa 8122241  T
Q  400 attaagtgtttttgaagt----attacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaa 482  Q
    ||||| ||||||||||||    |||| ||||| ||| |||||  ||||||||||||||| ||||||| |||||||||||||| ||||    
T  8122242 attaattgtttttgaagtattaattatatgataatttatcatcttgttaattcaattttctaaaaattattttataatgtctataaa 8122328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 308 - 421
Target Start/End: Complemental strand, 12682972 - 12682854
Alignment:
Q  308 gggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaatt 402  Q
    ||||||||||||||||||| |||||||| | ||  ||||| | ||||||||||||||||||||| ||||||||||||||||||| ||||     ||||||    
T  12682972 gggtgtgtttggattgaggttttaggagcgaaacagagggaaaggctcacttttattttttaaactacgaacaatgtaaaatgtattttttaaataaatt 12682873  T
Q  403 aagtgtttttgaagtatta 421  Q
    |||||||||||||||||||    
T  12682872 aagtgtttttgaagtatta 12682854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 309 - 474
Target Start/End: Original strand, 16833684 - 16833867
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggagggg-aggg-ctcacttttattttttaaattacgaacaatgtaaaatgtcttttt--------- 397  Q
    ||||||||||||||||||||||| ||||| |||||| | | || | || |||||||||||||||||||||||||||||||||||| |||||             
T  16833684 ggtgtgtttggattgagggtttaagagggaaagggatgagtagagacttacttttattttttaaattacgaacaatgtaaaatgtttttttttttttttt 16833783  T
Q  398 -------aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatg 474  Q
           |||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| ||||||| || ||||||||    
T  16833784 taaaaaaaaattaagtgtttttgaagtattacatgatcatttatcatgttattaattcaattttataaaaattatattataatg 16833867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 303 - 376
Target Start/End: Original strand, 36267549 - 36267622
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  36267549 tcttagggtgtgtttggatggagggtttaggaggggaagggaggggagggcttagttttcttttttaaattacg 36267622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 307 - 376
Target Start/End: Complemental strand, 39856109 - 39856040
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||    
T  39856109 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacg 39856040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 326 - 489
Target Start/End: Original strand, 48015229 - 48015394
Alignment:
Q  326 ggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt------aaattaagtgtttttgaagtat 419  Q
    |||||| || ||||||||||||||| | || ||||||| |||||||||||    |||||||||||| |||||      ||||||||||||||||||  ||    
T  48015229 ggtttacgaagggaagggaggggagcgttcgcttttatcttttaaattac----aatgtaaaatgtttttttttaaataaattaagtgtttttgaaaaat 48015324  T
Q  420 tacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaa 489  Q
    || ||||||||| |||||| |||||||||||||||  |||||| ||||||||| |||| ||| |||||||    
T  48015325 tatatgatcatttatcatgttgttaattcaattttccaaaaattattttataaagtctgtaatttaaaaa 48015394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 305 - 389
Target Start/End: Original strand, 48881556 - 48881640
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 389  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||| | ||||||    
T  48881556 ttagggtgtgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaattacggacattataaaat 48881640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 398 - 536
Target Start/End: Complemental strand, 23116408 - 23116269
Alignment:
Q  398 aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatca-ttttataatgtctttaaattaaaaaaggaatg 496  Q
    |||||||||||  ||||||||||| || |||||| |||||| || || ||||||||||||| || || ||||||| ||||| ||| ||||||||| || |    
T  23116408 aaattaagtgtgattgaagtattatataatcatttatcatgttgctatttcaattttttaataaacacttttatagtgtctgtaatttaaaaaagaaaag 23116309  T
Q  497 taagccctcccctcctaaaccctcttcccaaacacaccct 536  Q
    ||||||||||| ||||||||||||   |||||||||||||    
T  23116308 taagccctcccttcctaaaccctccatccaaacacaccct 23116269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 307 - 390
Target Start/End: Original strand, 28074103 - 28074186
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 390  Q
    |||||||||||||||||| |||||||||||||||||||||||||  ||||||||| |||||||||||||| ||| | |||||||    
T  28074103 agggtgtgtttggattgaaggtttaggaggggaagggaggggagaactcacttttcttttttaaattacggacattataaaatg 28074186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 472
Target Start/End: Complemental strand, 3216048 - 3215934
Alignment:
Q  363 ttttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaatttttta 457  Q
    |||||||||||| |||||||||||||||| ||||     ||||| |||| ||| |||||||||| ||||||||| |||||  ||||||||||||||| ||    
T  3216048 ttttttaaattatgaacaatgtaaaatgttttttcaaaataaatcaagtatttatgaagtattatatgatcatttatcatattgttaattcaattttcta 3215949  T
Q  458 aaaatcattttataa 472  Q
    |||||||||||||||    
T  3215948 aaaatcattttataa 3215934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 304 - 375
Target Start/End: Complemental strand, 33519295 - 33519224
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| || ||||||||||    
T  33519295 cttagggtgtgtttggatggagggtttaggaggggaagggaggggagggattacttttcttctttaaattac 33519224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 305 - 400
Target Start/End: Original strand, 47390853 - 47390948
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 400  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||| | |||||| |||||||||||| |||| || ||| |||| ||| ||||    
T  47390853 ttagggtgtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaattatgaactatataacatgtttttctaaa 47390948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 353 - 491
Target Start/End: Original strand, 3143526 - 3143673
Alignment:
Q  353 ctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatcatgctg----tt 443  Q
    |||| |||| ||||||||||||  ||||||||||||| | ||| ||||     |||||| |||||||||||||| ||||||||| |||||  ||    ||    
T  3143526 ctcaatttttttttttaaattataaacaatgtaaaatatttttataaaataaattaagtttttttgaagtattatatgatcatttatcattttgttaatt 3143625  T
Q  444 aattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 491  Q
    ||||||||||||||||||| ||||||||||||| |||| |||||||||    
T  3143626 aattcaattttttaaaaattattttataatgtcattaatttaaaaaag 3143673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 302 - 400
Target Start/End: Complemental strand, 18795843 - 18795746
Alignment:
Q  302 ctcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 400  Q
    ||||||| |||||||||||||||| |||||| ||||||||| |||||| ||||   |||| |||||||||||||||||||| |||||||| ||||||||    
T  18795843 ctcttagagtgtgtttggattgagagtttagaaggggaagg-aggggaaggcttgattttcttttttaaattacgaacaatataaaatgtttttttaaa 18795746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 1051742 - 1051670
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaac 379  Q
    |||||||||||||||||||||||||||||||||||||||| ||||  | | |||| |||||||||||||||||    
T  1051742 agggtgtgtttggattgagggtttaggaggggaagggaggagaggatttatttttcttttttaaattacgaac 1051670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 31571713 - 31571645
Alignment:
Q  308 gggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||||||||||||||||||||||| |||||||| | | |||||| ||||||||||||||    
T  31571713 gggtgtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacg 31571645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 299 - 382
Target Start/End: Original strand, 41496949 - 41497032
Alignment:
Q  299 acactcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaat 382  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||| |  | ||||||  ||||||||||||| |||||    
T  41496949 acacccttagggtgtgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattacggacaat 41497032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 305 - 438
Target Start/End: Complemental strand, 33655354 - 33655216
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt-----ttaa 399  Q
    |||| |||||||||||||||||||||||||||||||| |||| ||||| | |||||| |||||||||||| |  | || ||| |||| |||      |||    
T  33655354 ttagagtgtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaattatgggctatataacatgtttttctaaaataa 33655255  T
Q  400 attaagtgtttttgaagtattacatgatcattgatcatg 438  Q
    |||||||||  ||||||||||| ||||||||| ||||||    
T  33655254 attaagtgtgattgaagtattatatgatcatttatcatg 33655216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 307 - 400
Target Start/End: Complemental strand, 13771190 - 13771097
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 400  Q
    ||||||||||| |||||||||||||||||||||||||||| ||| | | ||||||  ||||||||||||| || || ||| |||| ||||||||    
T  13771190 agggtgtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacggactatataacatgtttttttaaa 13771097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 307 - 375
Target Start/End: Original strand, 4833531 - 4833599
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||| | ||||||  ||||||||||||    
T  4833531 agggtatgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattac 4833599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 305 - 389
Target Start/End: Original strand, 13770946 - 13771030
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 389  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||  | |||| |  ||||||||||||| ||| | ||||||    
T  13770946 ttagggtgtgtttggattgaggatttaggaggggaagggaggggaggatttacttattatttttaaattacggacactataaaat 13771030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 411 - 507
Target Start/End: Complemental strand, 30592388 - 30592292
Alignment:
Q  411 ttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctccc 507  Q
    ||||||||||| ||||| ||| |||||    ||| |||||||||||||||||||||||||| ||||| ||| ||||||||| || ||||||||||||    
T  30592388 ttgaagtattatatgattatttatcatatgattatttcaattttttaaaaatcattttatagtgtctgtaatttaaaaaagaaaagtaagccctccc 30592292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 302 - 373
Target Start/End: Original strand, 40282192 - 40282263
Alignment:
Q  302 ctcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaatt 373  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||| |   |||| |||||||||||    
T  40282192 ctcttagggtatgtttggattgagggtttaggaggggaagggagaggagggtttgattttcttttttaaatt 40282263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 305 - 351
Target Start/End: Original strand, 25887190 - 25887236
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagg 351  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  25887190 ttagggtgtgtttggattgagggtttatgaggggaagggaggggagg 25887236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 305 - 391
Target Start/End: Original strand, 40196530 - 40196616
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgt 391  Q
    ||||||||||||||||| |||||||| |||||||||||||| |||||| | ||||||  ||||| ||||||| ||| | ||||||||    
T  40196530 ttagggtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggacactataaaatgt 40196616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 4835479 - 4835548
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||| ||||||||||||||||| | |||||||||| | ||| |||||| ||||||||||||||    
T  4835479 agggtgtgtttagattgagggtttaggagagaaagggaggggtgtgcttacttttcttttttaaattacg 4835548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 380
Target Start/End: Complemental strand, 18231830 - 18231757
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaaca 380  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||  | ||||||  |||||||||||| ||||    
T  18231830 agggtgtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaattacaaaca 18231757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 307 - 375
Target Start/End: Original strand, 30592253 - 30592321
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    ||||||| ||||||| |||| |||||||||| |||||| ||||||||| |||||| |||||||||||||    
T  30592253 agggtgtatttggatggaggatttaggagggaaagggaagggagggcttacttttcttttttaaattac 30592321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 301 - 376
Target Start/End: Complemental strand, 34228569 - 34228494
Alignment:
Q  301 actcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||||||||||  | ||||||  |||| ||||||||    
T  34228569 actcttagggtgtgtttgaattgaaggtttaggaggagaagggaggggaggatttacttttcattttaaaattacg 34228494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 320 - 387
Target Start/End: Complemental strand, 48147471 - 48147404
Alignment:
Q  320 attgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaa 387  Q
    |||||| ||||||||||| ||| |||| ||| |||||||||||||||||||||||| || ||||||||    
T  48147471 attgagagtttaggagggaaagagaggagagagctcacttttattttttaaattacaaataatgtaaa 48147404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 500
Target Start/End: Complemental strand, 2087892 - 2087785
Alignment:
Q  397 taaattaagtgtttttgaagtattacatgatca----ttgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaagg 492  Q
    |||||| | |||||||||||||||| |||||||    || |||||| |||||||||| |||||||||||| |||||||||| ||  ||| |||||||||     
T  2087892 taaatttaatgtttttgaagtattatatgatcaattatttatcatgttgttaattcatttttttaaaaattattttataatatccgtaatttaaaaaaga 2087793  T
Q  493 aatgtaag 500  Q
    || |||||    
T  2087792 aaagtaag 2087785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 309 - 390
Target Start/End: Complemental strand, 37926083 - 37926002
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 390  Q
    |||||||| ||||||| | ||||||| |||||||||||||||| |||| |||| |||| ||||||||| ||| | |||||||    
T  37926083 ggtgtgttaggattgaagatttaggaagggaagggaggggaggactcatttttcttttctaaattacggacattataaaatg 37926002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 376
Target Start/End: Original strand, 43230232 - 43230305
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||| |||||||||||||| ||||||| ||| | |||| ||||||||| | |||||| ||||||||||||||    
T  43230232 tcttagtgtgtgtttggattgggggtttaagagagaaaggaaggggagggtttacttttcttttttaaattacg 43230305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 350
Target Start/End: Complemental strand, 47391100 - 47391057
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggag 350  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||    
T  47391100 agggtgtgtttggatggagggtttaagaggggaagggaggggag 47391057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 367
Target Start/End: Original strand, 31553183 - 31553243
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttt 367  Q
    ||||||||||||||||| |||| ||||||||||||||||||| ||||| ||||||||| ||||    
T  31553183 ttagggtgtgtttggatggagg-tttaggaggggaagggaggagaggg-tcacttttaatttt 31553243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 376
Target Start/End: Complemental strand, 42306571 - 42306505
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||||||||||||||||||||  ||||||| || | | ||||  |||||||||||||    
T  42306571 gtgtgtttggattgagggtttaggaggggaattgaggggatggtttaattttcatttttaaattacg 42306505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 538
Target Start/End: Original strand, 17852966 - 17853106
Alignment:
Q  397 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatg 496  Q
    ||||||||||||  |||| |||||| |||||| || |||||| ||||| || |  |||||||||| | ||| ||| ||    ||| ||||||| | || |    
T  17852966 taaattaagtgtgattgaggtattatatgatcgtttatcatgttgttattttatctttttaaaaa-cttttcatagtgctcgtaatttaaaaatgaaaag 17853064  T
Q  497 taagccctcccctcctaaaccctcttcccaaacacaccctta 538  Q
    ||||||||||||||||||||||||   |||||||||||||||    
T  17853065 taagccctcccctcctaaaccctccatccaaacacaccctta 17853106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 307 - 375
Target Start/End: Original strand, 13425120 - 13425188
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    ||||||||||||||| |||||||||||||||||||| || ||| || | | ||||  ||||||||||||    
T  13425120 agggtgtgtttggatagagggtttaggaggggaaggaagaggatggtttattttttatttttaaattac 13425188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 23116470 - 23116418
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcactttt 361  Q
    ||||||||||||  ||||||||| ||||||||||||||||||| || ||||||    
T  23116470 ggtgtgtttggaccgagggtttacgaggggaagggaggggaggacttactttt 23116418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 307 - 339
Target Start/End: Complemental strand, 37417867 - 37417835
Alignment:
Q  307 agggtgtgtttggattgagggtttaggagggga 339  Q
    |||||||||||||||||||||||||||||||||    
T  37417867 agggtgtgtttggattgagggtttaggagggga 37417835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 307 - 375
Target Start/End: Complemental strand, 48015451 - 48015383
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    ||||| ||||||||| ||||| |||||||||||||||||  ||| ||| ||||||  ||||||||||||    
T  48015451 agggtttgtttggatggagggattaggaggggaagggagatgagagcttacttttcgtttttaaattac 48015383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 17852870 - 17852913
Alignment:
Q  296 taaacactcttagggtgtgtttggattgagggtttaggagggga 339  Q
    |||| ||| ||||||||||||| |||||||||||||||||||||    
T  17852870 taaaaacttttagggtgtgtttagattgagggtttaggagggga 17852913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 25887436 - 25887366
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaa 378  Q
    ||||||||||||| |  ||||||||||||||||||||||||||| | | || |||  |||||||||||||||    
T  25887436 agggtgtgtttgg-tgaagggtttaggaggggaagggaggggagagtttacatttcatttttaaattacgaa 25887366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 375
Target Start/End: Original strand, 26365765 - 26365836
Alignment:
Q  305 ttagggtgtgtttggattgagggtttagga-ggggaagggaggggagggctcacttttattttttaaattac 375  Q
    |||| ||||||||||||||||||||||||| |||||||||||  ||| | | |||||| ||||||| |||||    
T  26365765 ttagagtgtgtttggattgagggtttaggagggggaagggagttgagagtttacttttcttttttatattac 26365836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 336 - 438
Target Start/End: Complemental strand, 41497172 - 41497065
Alignment:
Q  336 gggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt-----ttaaattaagtgtttttgaagtattacatgatcat 430  Q
    ||||||||||||||||| | |||||| |||||||||||||| || || ||| |||| |||      ||||||||||||  |||||| |||| ||||||||    
T  41497172 gggaagggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattatatgatcat 41497073  T
Q  431 tgatcatg 438  Q
    | ||||||    
T  41497072 ttatcatg 41497065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 332 - 390
Target Start/End: Original strand, 31364070 - 31364128
Alignment:
Q  332 ggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 390  Q
    ||||||||||||||||||| ||| |||||| |||| ||||||||| ||| | |||||||    
T  31364070 ggaggggaagggaggggagagcttacttttcttttctaaattacggacattataaaatg 31364128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 351
Target Start/End: Complemental strand, 47230061 - 47230019
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagg 351  Q
    |||||||||| |||||||||||||||||  |||||||||||||    
T  47230061 ggtgtgtttgaattgagggtttaggaggaaaagggaggggagg 47230019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 37621012 - 37620951
Alignment:
Q  313 tgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaatta 374  Q
    ||||||||| ||||||||  || ||||||||||||||||| |  ||||| ||||||||||||    
T  37621012 tgtttggatggagggtttgagaagggaagggaggggagggtttgcttttcttttttaaatta 37620951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 334
Target Start/End: Original strand, 38749576 - 38749605
Alignment:
Q  305 ttagggtgtgtttggattgagggtttagga 334  Q
    ||||||||||||||||||||||||||||||    
T  38749576 ttagggtgtgtttggattgagggtttagga 38749605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 350
Target Start/End: Original strand, 41008188 - 41008225
Alignment:
Q  313 tgtttggattgagggtttaggaggggaagggaggggag 350  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  41008188 tgtttggattgagggtttgagaggggaagggaggggag 41008225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 342
Target Start/End: Complemental strand, 41008424 - 41008387
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagg 342  Q
    |||||||||||||||||  |||||||||||||||||||    
T  41008424 ttagggtgtgtttggatgcagggtttaggaggggaagg 41008387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 339
Target Start/End: Complemental strand, 17853104 - 17853072
Alignment:
Q  307 agggtgtgtttggattgagggtttaggagggga 339  Q
    ||||||||||||||| |||||||||||||||||    
T  17853104 agggtgtgtttggatggagggtttaggagggga 17853072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 337
Target Start/End: Complemental strand, 24970407 - 24970379
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggg 337  Q
    |||||||||||||||||||||||||||||    
T  24970407 ggtgtgtttggattgagggtttaggaggg 24970379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 389
Target Start/End: Complemental strand, 35422198 - 35422126
Alignment:
Q  317 tggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 389  Q
    ||||||||||||||||||||| ||  ||| |||||| | |||||| ||||| |||||||| ||| | ||||||    
T  35422198 tggattgagggtttaggagggaaatagagtggagggtttacttttctttttaaaattacggacattataaaat 35422126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 342 - 390
Target Start/End: Complemental strand, 39646678 - 39646630
Alignment:
Q  342 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 390  Q
    |||||||| | |||||||||||||||||||||||| ||| | |||||||    
T  39646678 ggaggggatgactcacttttattttttaaattacggacattataaaatg 39646630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 311 - 339
Target Start/End: Complemental strand, 39646699 - 39646671
Alignment:
Q  311 tgtgtttggattgagggtttaggagggga 339  Q
    |||||||||||||||||||||||||||||    
T  39646699 tgtgtttggattgagggtttaggagggga 39646671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 121; Significance: 1e-61; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 342 - 539
Target Start/End: Original strand, 8182 - 8390
Alignment:
Q  342 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaa-----attaagtgtttttgaagtattacatgatcattgatca 436  Q
    |||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||     ||||| |||||||||||||||| ||||||||| ||||    
T  8182 ggagaggagagctcacttttattttttaaattacgaacaatgtgaaatgtctttttaagataaattaactgtttttgaagtattatatgatcattaatca 8281  T
Q  437 tgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaag-----ccctcccctcctaaaccctcttccc-aaaca 530  Q
    || ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||     |||||||||||||||| |||||||| |||||    
T  8282 tgttgttaattcaattttttaaaaataattttataacgtctttaaattaaaaaaggaatgtaagccctcccctcccctcctaaactctcttccctaaaca 8381  T
Q  531 cacccttaa 539  Q
    |||||||||    
T  8382 cacccttaa 8390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 1e-61; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 305 - 511
Target Start/End: Complemental strand, 1085736 - 1085524
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 399  Q
    ||||||||||||||||| |||||||||||||||||||||||| || | ||||||||||||||||||||||||||| ||||||||||| ||||     |||    
T  1085736 ttagggtgtgtttggatagagggtttaggaggggaagggaggagatgactcacttttattttttaaattacgaaccatgtaaaatgtttttttaaaataa 1085637  T
Q  400 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaagg-aatgta 498  Q
    |||||||||||||||||||||| ||||||||| |||||||||||| ||||||||| ||||||||||||| |||||||  ||| |||||||||| || |||    
T  1085636 attaagtgtttttgaagtattatatgatcatttatcatgctgttagttcaattttctaaaaatcattttctaatgtccgtaatttaaaaaaggaaaagta 1085537  T
Q  499 agccctcccctcc 511  Q
    || ||||||||||    
T  1085536 agtcctcccctcc 1085524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 303 - 534
Target Start/End: Original strand, 33643264 - 33643499
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----t 397  Q
    ||||||||||||||| |||||| ||||||||||||||||||| |||| | |||||||||||||||||||||||||| |||||||||||| ||||     |    
T  33643264 tcttagggtgtgtttagattgaaggtttaggaggggaagggaagggatgactcacttttattttttaaattacgaaaaatgtaaaatgtttttttaaaat 33643363  T
Q  398 aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgt 497  Q
    |||||||||||||||||||||||| ||||||||| |||||  | ||||||||||||| |||||||||||||| |||||   ||| ||||||||| ||| |    
T  33643364 aaattaagtgtttttgaagtattatatgatcattcatcatattattaattcaattttctaaaaatcattttaaaatgttcataatttaaaaaagaaat-t 33643462  T
Q  498 aagccctcccctcctaaaccctcttcccaaacacacc 534  Q
    ||   |||||||||||||||||||  |||||||||||    
T  33643463 aaattctcccctcctaaaccctctatccaaacacacc 33643499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 307 - 491
Target Start/End: Original strand, 35927814 - 35928001
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaatt 402  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||   | || |    ||||||    
T  35927814 agggtgtgtttggattgaggttttaggaggggaatggaggggagggctcacatttattttttaaattatgaacaatgtaaatatttttctaaaataaatt 35927913  T
Q  403 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 491  Q
    |||| |||||||||||||| ||||||||| |||||| ||||||||||||||| | ||||| |||||||||  ||| ||| |||||||||    
T  35927914 aagtatttttgaagtattatatgatcatttatcatgttgttaattcaattttct-aaaattattttataaaatctgtaatttaaaaaag 35928001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 310 - 511
Target Start/End: Complemental strand, 40709532 - 40709327
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaa 404  Q
    ||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| || ||||      |||||||    
T  40709532 gtgtgtttggattgaggatttaggaggggaacggaggggaggg-tcacttttattttttaaattatgaacaatgtaaaaggttttttaaaaagaaattaa 40709434  T
Q  405 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccct 504  Q
    ||||||||||||||||| ||||||||| |||||   ||||||| |||||| ||||||| |||||||||| |   ||| ||||||||| || ||||| |||    
T  40709433 gtgtttttgaagtattatatgatcatttatcatatcgttaatttaattttctaaaaattattttataatattcgtaatttaaaaaagaaaagtaagtcct 40709334  T
Q  505 cccctcc 511  Q
    || ||||    
T  40709333 cctctcc 40709327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 305 - 515
Target Start/End: Complemental strand, 525346 - 525133
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------ta 398  Q
    |||||||||||||||||||||||||||||| ||||||||| || || | ||||||||| |||||||||||| ||||| ||||||||| ||||      ||    
T  525346 ttagggtgtgtttggattgagggtttaggacgggaagggaaggaagagttcacttttaatttttaaattacaaacaacgtaaaatgttttttttaaaata 525247  T
Q  399 aattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgta 498  Q
    |||||||| | |||||||||||| || |||||| |||||  ||||||||||| ||| ||||||| ||||||| |||||  ||| ||||||||| || |||    
T  525246 aattaagtttgtttgaagtattatataatcatttatcatattgttaattcaa-tttctaaaaattattttat-atgtccgtaatttaaaaaagaaaagta 525149  T
Q  499 agccctcccctcctaaa 515  Q
    |  ||||||||||||||    
T  525148 a-tcctcccctcctaaa 525133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 335 - 539
Target Start/End: Original strand, 47071079 - 47071288
Alignment:
Q  335 ggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatca 429  Q
    ||||||||||||| |  | ||| ||||||||| |||||||||| ||||||||||||| |||| |||     ||||||||||||||| ||||  |||||||    
T  47071079 ggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaaatattttatgatca 47071178  T
Q  430 ttgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttcccaaac 529  Q
    || |||||| |||||||| |||||| |||||||||||||||||||||  ||| ||||||||| || || || | |||| |||||||||||    ||||||    
T  47071179 tttatcatgttgttaattaaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagttagtcttcccttcctaaacccttcatccaaac 47071278  T
Q  530 acacccttaa 539  Q
    ||||||||||    
T  47071279 acacccttaa 47071288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 356 - 510
Target Start/End: Original strand, 25268313 - 25268472
Alignment:
Q  356 acttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaa 450  Q
    |||||||| |||||||||  |||||||||||||||| ||||||||     ||||||||||||||||||||| ||||||||| |||| | |||| ||| ||    
T  25268313 acttttatattttaaattttgaacaatgtaaaatgtatttttaaaataaattaagtgtttttgaagtattatatgatcatttatcacgttgttgattaaa 25268412  T
Q  451 ttttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctc 510  Q
    |||| |||||||||||||||||| ||  ||| |||||||||||| |||| ||||||||||    
T  25268413 ttttctaaaaatcattttataatttccgtaatttaaaaaaggaaagtaaaccctcccctc 25268472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 307 - 390
Target Start/End: Original strand, 51303384 - 51303467
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 390  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  51303384 agggtgtgtttggattgagggtttaggaggggaggggaggggagggctcacttttattttttatattaccaacaatgtaaaatg 51303467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 344 - 491
Target Start/End: Original strand, 2506576 - 2506728
Alignment:
Q  344 aggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtattacatgatcattgatcatg 438  Q
    ||||||||| ||| |||||| ||||||||||||| |||| |||||||| ||||     ||||||||||||||||||||||||| ||||||||| || ||     
T  2506576 aggggagggttcatttttatcttttaaattacgaccaatataaaatgttttttcaaaataaattaagtgtttttgaagtattatatgatcatttattata 2506675  T
Q  439 ctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 491  Q
     ||||||||| ||||||||||||| |||||||||| ||| ||| |||||||||    
T  2506676 ttgttaattcgattttttaaaaattattttataatatctgtaatttaaaaaag 2506728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 337 - 469
Target Start/End: Complemental strand, 51303600 - 51303461
Alignment:
Q  337 ggaagggaggggagggctcactttt-attttttaaattacgaacaatgtaaaatgtcttttt------aaattaagtgtttttgaagtattacatgatca 429  Q
    |||||||| ||||||||||| |||| |||||||||||||||||||||||||||  | |||||      |||||||||||||||||||||||| |||||||    
T  51303600 ggaagggaagggagggctcattttttattttttaaattacgaacaatgtaaaacattttttttaaaataaattaagtgtttttgaagtattatatgatca 51303501  T
Q  430 ttgatcatgctgttaattcaattttttaaaaatcatttta 469  Q
    || |||||| |||||||||||||||  |||||||||||||    
T  51303500 tttatcatgttgttaattcaattttaaaaaaatcatttta 51303461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 315 - 476
Target Start/End: Complemental strand, 13387163 - 13386989
Alignment:
Q  315 tttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-------------taaat 401  Q
    ||||||||||||||||||||||| ||| ||| ||||| |||| |||||||||||||||||| ||||||| ||||||| ||||             |||||    
T  13387163 tttggattgagggtttaggagggaaagagagtggaggactcatttttattttttaaattacaaacaatgaaaaatgttttttttttttttataaataaat 13387064  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 476  Q
    |||||||||||   |||||| ||||||||| |||||| ||||||||||||||| |||||||| |||||| |||||    
T  13387063 taagtgttttttgtgtattatatgatcatttatcatgttgttaattcaattttctaaaaatcgttttatgatgtc 13386989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 350 - 537
Target Start/End: Original strand, 1344592 - 1344783
Alignment:
Q  350 gggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaa 445  Q
    |||||||||||||||||||||||||| ||||||| ||||||| ||||     ||||||||||||||||| ||| || ||| | ||| |||||| ||||      
T  1344592 gggctcacttttattttttaaattacaaacaatgcaaaatgttttttaaaaaaaattaagtgtttttgatgtaatatatgtttatttatcatgttgttgg 1344691  T
Q  446 ttcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttcccaaacacaccctt 537  Q
    ||||||||| |||||||||||||| ||||||  ||| ||||||||| ||  |||    |||||||||||||||||   ||||||||| ||||    
T  1344692 ttcaattttctaaaaatcattttacaatgtccgtaatttaaaaaagaaaaataaattttcccctcctaaaccctccatccaaacacatcctt 1344783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 315 - 400
Target Start/End: Complemental strand, 23536924 - 23536839
Alignment:
Q  315 tttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 400  Q
    |||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||| | || ||||||||||||| ||||||||    
T  23536924 tttggattgaggatttatgaggggaagggaggggagggctcatttttattttttaaataatgatcaatgtaaaatgtttttttaaa 23536839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 414 - 511
Target Start/End: Original strand, 35512909 - 35513006
Alignment:
Q  414 aagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcc 511  Q
    |||||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||  ||| ||||||||  || ||||||||||||||||    
T  35512909 aagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccataatttaaaaaataaaagtaagccctcccctcc 35513006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 304 - 476
Target Start/End: Original strand, 20607220 - 20607390
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------- 396  Q
    ||||||||||||||| |||||||||||||||||||||     |||||||||||||||||||||||||||||   ||||||| |||||| ||||           
T  20607220 cttagggtgtgtttgaattgagggtttaggaggggaa-----gggagggctcacttttattttttaaatta--tacaatgt-aaatgtttttttttttta 20607311  T
Q  397 --taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 476  Q
      ||||||||||||||||||||||||| ||||| ||  ||||   |||||||| ||||||  ||||||||||||||||||||    
T  20607312 aataaattaagtgtttttgaagtattatatgataatatatca---tgttaatttaattttcaaaaaatcattttataatgtc 20607390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 307 - 459
Target Start/End: Original strand, 17622536 - 17622694
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatg------taaaatgtctttttaaa 400  Q
    |||||||||||||||| |||||| |||||||||||  | |||||| ||||||||||||||||||| |||||||||||      |||||     |  ||||    
T  17622536 agggtgtgtttggattaagggttcaggaggggaagcaatgggaggactcacttttattttttaaactacgaacaatgtaattttaaaaaaaaataataaa 17622635  T
Q  401 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaa 459  Q
    ||||||||||| ||||||||| ||||||| | |||||| | ||||||||||||||||||    
T  17622636 ttaagtgttttagaagtattatatgatcacttatcatgttattaattcaattttttaaa 17622694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 311 - 374
Target Start/End: Complemental strand, 35513037 - 35512974
Alignment:
Q  311 tgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaatta 374  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35513037 tgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttattttttaaatta 35512974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 305 - 396
Target Start/End: Original strand, 38509892 - 38509983
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 396  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||  ||||||||||||| ||| | | |||||||||||    
T  38509892 ttagggtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacggacactatgaaatgtctttt 38509983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 12234010 - 12234079
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| | |||| ||||||||||||||    
T  12234010 agggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacg 12234079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 304 - 428
Target Start/End: Original strand, 30010329 - 30010458
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt-----tta 398  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  | |||||| || ||||||||||| || || ||| |||| |||      ||    
T  30010329 cttagggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacggactatataacatgtttttctaaaata 30010428  T
Q  399 aattaagtgtttttgaagtattacatgatc 428  Q
    ||||||||||  ||||||||||| ||||||    
T  30010429 aattaagtgtggttgaagtattatatgatc 30010458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 40094927 - 40095002
Alignment:
Q  301 actcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||| | ||||||  |||||||||||||    
T  40094927 actcttagggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacg 40095002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 314 - 376
Target Start/End: Complemental strand, 2859169 - 2859107
Alignment:
Q  314 gtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  2859169 gtttggattgaaggtttaggaggggaagggaggggagggtttacttttattttttaaattacg 2859107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 342 - 476
Target Start/End: Complemental strand, 40287467 - 40287325
Alignment:
Q  342 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt--------aaattaagtgtttttgaagtattacatgatcattga 433  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||| | | |||        |||||||||||||||||||||||| || |||||| |    
T  40287467 ggaggggagagctcacttttattttttaaactacgaactatgtaaaatatatatttttttaaataaattaagtgtttttgaagtattatataatcattta 40287368  T
Q  434 tcatgctgttaattcaattttttaaaaatcattttataatgtc 476  Q
    | ||  ||||||||||||||| ||||| |||||| | ||||||    
T  40287367 tgattttgttaattcaattttctaaaactcatttcacaatgtc 40287325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 41498404 - 41498476
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaac 379  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| | ||||||  ||||||||||| ||||    
T  41498404 agggtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaattatgaac 41498476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 35349708 - 35349637
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||| | ||||||  |||||||||||||    
T  35349708 ttagggtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacg 35349637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 26324014 - 26324059
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggaggg 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  26324014 agggtgtgtttggattgagggtttaggaggggaagggaggggaggg 26324059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 305 - 378
Target Start/End: Original strand, 40709290 - 40709363
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaa 378  Q
    |||||||||||||||||| | |||||| ||||||||||||| ||||| || |||||| ||||||||||||||||    
T  40709290 ttagggtgtgtttggatttaaggtttaagaggggaagggagaggaggacttacttttcttttttaaattacgaa 40709363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 315 - 454
Target Start/End: Complemental strand, 50079620 - 50079476
Alignment:
Q  315 tttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtt 409  Q
    ||||||||||| |||||||||| |||  |||| ||| | ||  ||||||| |||||| |||||||||| |||||||| ||||     |||||||||||||    
T  50079620 tttggattgagtgtttaggaggagaaaagaggagagagttcctttttattatttaaagtacgaacaatataaaatgtttttttaaaataaattaagtgtt 50079521  T
Q  410 tttgaagtattacatgatcattgatcatgctgttaattcaatttt 454  Q
    ||| |||||||| ||||||||| |||||  ||||| || ||||||    
T  50079520 tttaaagtattatatgatcatttatcatattgttagttaaatttt 50079476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 309 - 376
Target Start/End: Complemental strand, 12234252 - 12234185
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||| |||||||||||||||||||||||||||||| | | ||||  |||||||||||||    
T  12234252 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattacg 12234185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 32951564 - 32951493
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||| | | ||||||  |||||||||||||    
T  32951564 ttagggtgtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacg 32951493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 310 - 376
Target Start/End: Complemental strand, 38510135 - 38510069
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||| ||||||||||||||||||||||||||||| | | |||| ||||||||| ||||    
T  38510135 gtgtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaactacg 38510069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 306 - 375
Target Start/End: Original strand, 2858931 - 2859000
Alignment:
Q  306 tagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||  ||| ||||||||    
T  2858931 tagggtgtgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaattac 2859000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 20607461 - 20607416
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggaggg 352  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  20607461 agggtgtgtttggatggagggtttaggaggggaagggaggggaggg 20607416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 376
Target Start/End: Complemental strand, 30010576 - 30010507
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||| | ||||||  |||| ||||||||    
T  30010576 agggtgtgtttggatggagggtttagaaggggaagggaggggagggtttacttttcattttgaaattacg 30010507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 353 - 461
Target Start/End: Original strand, 52707691 - 52707803
Alignment:
Q  353 ctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaatt 447  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||     ||||||| || |||||||||||||| || |||||| |||||| |||| |||    
T  52707691 ctcacttttattttttaaactacaaacaatgtaaaatgttttttaaaaataaattatgtatttttgaagtattatatcatcatttatcatgttgtt-att 52707789  T
Q  448 caattttttaaaaa 461  Q
     ||||||| |||||    
T  52707790 aaatttttaaaaaa 52707803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 1085483 - 1085559
Alignment:
Q  301 actcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcactttt-attttttaaattacg 376  Q
    ||||| ||||||||||||||| |||||||||||||||| | |||||||||| || ||||||  ||||||||||||||    
T  1085483 actctaagggtgtgtttggatggagggtttaggagggggatggaggggaggacttacttttccttttttaaattacg 1085559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 7444476 - 7444547
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||| ||||||| ||||||||||||| ||||| ||||||| ||||||| | |||||| ||||||||||||||    
T  7444476 ttagagtgtgttaggattgagggtttgggaggagaagggaagggagggtttacttttcttttttaaattacg 7444547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 304 - 350
Target Start/End: Original strand, 20576130 - 20576176
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggag 350  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  20576130 cttagagtgtgtttggatagagggtttaggaggggaagggaggggag 20576176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 304 - 342
Target Start/End: Complemental strand, 26941080 - 26941042
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagg 342  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26941080 cttagggtgtgtttggattgagggtttaggaggggaagg 26941042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 51597672 - 51597793
Alignment:
Q  311 tgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaag 405  Q
    ||||||||||||||||||||| ||  |||||||||||||| | | |||||| |||||||||| ||| || || ||| |||| ||||||||     |||||    
T  51597672 tgtgtttggattgagggtttatgaaaggaagggaggggagagtttacttttcttttttaaatcacggactatataacatgtttttttaaaataaattaag 51597771  T
Q  406 tgtttttgaagtattacatgat 427  Q
    |||  ||||||||||| |||||    
T  51597772 tgtgattgaagtattatatgat 51597793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 397
Target Start/End: Original strand, 2470728 - 2470820
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt 397  Q
    ||||||||||||||||| ||||||||||||||||||| ||  |||||| |   |||   ||||||||||||||||| | |||||||| |||||    
T  2470728 ttagggtgtgtttggatggagggtttaggaggggaagagaatggagggtttcgtttacatttttaaattacgaacactataaaatgttttttt 2470820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 41498651 - 41498579
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggagggg-aagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||||| ||| |||||||||||| |||||||||||||  | ||||||  |||||||||||||    
T  41498651 ttagggtgtgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacg 41498579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 35512638 - 35512694
Alignment:
Q  311 tgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaa 371  Q
    ||||||||||| |||||||||||||||||     |||||||||||||||||||||||||||    
T  35512638 tgtgtttggatggagggtttaggagggga----gggggagggctcacttttattttttaaa 35512694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 302 - 438
Target Start/End: Complemental strand, 40095183 - 40095041
Alignment:
Q  302 ctcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----- 396  Q
    |||| |||||||||||||||||||||||||| |||  |||||| || |||| | ||||||  ||||||||||||  || || ||| |||| ||||         
T  40095183 ctctaagggtgtgtttggattgagggtttagaaggaaaagggaaggaagggtttacttttcgtttttaaattacagactatataacatgttttttctaaa 40095084  T
Q  397 -taaattaagtgtttttgaagtattacatgatcattgatcatg 438  Q
     ||||||||||||  ||||||||||| |||||| || ||||||    
T  40095083 ataaattaagtgtgattgaagtattatatgatcgtttatcatg 40095041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 304 - 375
Target Start/End: Original strand, 49832544 - 49832615
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    |||||||||  |||||||| | |||||||||||||||| ||| |||| ||| |||||| |||||||||||||    
T  49832544 cttagggtgcatttggattcaaggtttaggaggggaagtgagaggagagcttacttttcttttttaaattac 49832615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 375
Target Start/End: Complemental strand, 35928058 - 35927988
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    ||||||||||||||||||||||| |||| ||||||||||  |||| |  | |||||| |||||||||||||    
T  35928058 ttagggtgtgtttggattgagggcttagaaggggaaggggagggatgatttacttttcttttttaaattac 35927988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 315 - 376
Target Start/End: Original strand, 10391880 - 10391941
Alignment:
Q  315 tttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||| |||||||||||||  |||||||||| | ||||||  |||||||||||||    
T  10391880 tttggattgaggttttaggaggggaaacgaggggagggtttacttttcatttttaaattacg 10391941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 315 - 376
Target Start/End: Complemental strand, 25268500 - 25268439
Alignment:
Q  315 tttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||| |||||||||| |||||||| |||||||||| | |||||  ||||||||||||||    
T  25268500 tttggatggagggtttagaaggggaagtgaggggagggtttactttccttttttaaattacg 25268439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 8529807 - 8529841
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggagggga 339  Q
    |||||||| ||||||||||||||||||||||||||    
T  8529807 ttagggtgcgtttggattgagggtttaggagggga 8529841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 305 - 375
Target Start/End: Complemental strand, 28770967 - 28770897
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    ||||||||||||||||| || |||||||||||| || |||| |||||| | | ||||  ||||||||||||    
T  28770967 ttagggtgtgtttggatggaaggtttaggagggaaaaggagtggagggtttattttttatttttaaattac 28770897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 35349466 - 35349533
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||| ||||||||| |||||||  || |||||||| | ||||||  |||||||||||||    
T  35349466 agggtgtgtttggatggagggtttaagagggga--gggggggagggtttacttttcatttttaaattacg 35349533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 310 - 342
Target Start/End: Complemental strand, 2470966 - 2470934
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagg 342  Q
    ||||||||||||||| |||||||||||||||||    
T  2470966 gtgtgtttggattgatggtttaggaggggaagg 2470934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 305 - 397
Target Start/End: Complemental strand, 41676522 - 41676435
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt 397  Q
    ||||| ||||||||||| ||||||||||||     || |||||||||| | ||||||  ||||||||||||| ||| | |||||||| |||||    
T  41676522 ttaggatgtgtttggatcgagggtttagga-----agagaggggagggtttacttttcatttttaaattacggacactataaaatgttttttt 41676435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 457
Target Start/End: Complemental strand, 44211054 - 44210994
Alignment:
Q  397 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaatttttta 457  Q
    ||||||||||||  ||||||||||| |||||| || |||||| ||||| || |||||||||    
T  44211054 taaattaagtgtgattgaagtattatatgatcgtttatcatgttgttattttaatttttta 44210994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 49946828 - 49946768
Alignment:
Q  311 tgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaa 371  Q
    ||||||||||||||||| ||||| |||||||||| | ||||| | |||||| || ||||||    
T  49946828 tgtgtttggattgagggattaggcggggaagggatgtgagggtttacttttcttgtttaaa 49946768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 389
Target Start/End: Complemental strand, 52428147 - 52428068
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 389  Q
    ||||| ||||| |||  |||||| ||| |||||||||| |||| || | |||||||||| ||||||||| |||||||||||    
T  52428147 ggtgtatttgggttgtaggtttatgagaggaagggaggagaggacttatttttattttt-aaattacgaccaatgtaaaat 52428068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 7e-60; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 305 - 476
Target Start/End: Original strand, 15353362 - 15353537
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt-aaat-- 401  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||      
T  15353362 ttagggtgtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacgaacaatgtaaaatgtttttttgaaataa 15353461  T
Q  402 -taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 476  Q
     ||||||||||||| |||||| ||||||||| || ||| ||||||||||||||| |||||||||||||||||||||    
T  15353462 ataagtgtttttgatgtattatatgatcatttataatgttgttaattcaattttctaaaaatcattttataatgtc 15353537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 305 - 476
Target Start/End: Original strand, 15323223 - 15323399
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 399  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| | ||||     |||    
T  15323223 ttagggtgtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacgaacaatgtaaaatatatttttaaaataa 15323322  T
Q  400 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 476  Q
    ||||||||||| ||| |||||| |||||||||  ||||| ||||||||||||||| |||||||||||||||||||||    
T  15323323 attaagtgtttctgatgtattatatgatcatttgtcatgttgttaattcaattttctaaaaatcattttataatgtc 15323399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 307 - 490
Target Start/End: Complemental strand, 9051776 - 9051590
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 401  Q
    ||||||||||||||||||||||||| |||||||||||||||||  ||||||||||| |||||||||||||||||||||||||| | ||||     |||||    
T  9051776 agggtgtgtttggattgagggtttaagaggggaagggagggga-tgctcactttta-tttttaaattacgaacaatgtaaaatattttttttaaataaat 9051679  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaa 490  Q
    ||||||||||| |||||  | ||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||  ||| ||||||||    
T  9051678 taagtgtttttaaagtagcatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatatccgtaatttaaaaaa 9051590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 303 - 509
Target Start/End: Original strand, 31798914 - 31799128
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------ 396  Q
    ||||||||||||||||||||||||||||||||||  ||| |||| || | ||| ||||||||||||||||||||| ||||||||||||| ||||          
T  31798914 tcttagggtgtgtttggattgagggtttaggaggataagagaggagatgactcgcttttattttttaaattacgagcaatgtaaaatgtttttttttttt 31799013  T
Q  397 --taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaa 494  Q
      ||||  || |||||||||||||||| ||||||||| |||||| |||||||||||||||| |||||| |||||||||| ||  ||| ||||||||| ||    
T  31799014 aataaaaaaaatgtttttgaagtattatatgatcatttatcatgttgttaattcaatttttaaaaaattattttataatatccgtaatttaaaaaagaaa 31799113  T
Q  495 tgtaagccctcccct 509  Q
     |||| | |||||||    
T  31799114 agtaaactctcccct 31799128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 305 - 511
Target Start/End: Original strand, 10293248 - 10293457
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt---ttaaat 401  Q
    ||||||||||||||||||| ||||||||||  | ||  ||||||||||||||||||||||||||||||||||||||||||||||| | |||    |||||    
T  10293248 ttagggtgtgtttggattgtgggtttaggaaagaaaaagaggggagggctcacttttattttttaaattacgaacaatgtaaaatatttttaaaataaat 10293347  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 501  Q
    ||    |||||||||||||| ||||| ||| || ||| ||| |||||| |||| |||||||||||||||||| ||| ||| || |||||| || ||||||    
T  10293348 taccgatttttgaagtattatatgattatttatgatgttgtcaattcagttttctaaaaatcattttataatatctgtaatttgaaaaagaaaagtaagc 10293447  T
Q  502 cctcccctcc 511  Q
     |||||||||    
T  10293448 tctcccctcc 10293457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 307 - 421
Target Start/End: Original strand, 23090995 - 23091114
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 401  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||     |||||    
T  23090995 agggtgtgtttggattgaaggtttaggaggggaagggaggggagggctcacttttatcttttaaattacgaacaatctaaaatgtatttttaaactaaat 23091094  T
Q  402 taagtgtttttgaagtatta 421  Q
    ||||||||||||||||||||    
T  23091095 taagtgtttttgaagtatta 23091114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 347 - 472
Target Start/End: Original strand, 26318345 - 26318475
Alignment:
Q  347 ggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatcatgctg 441  Q
    |||||| ||| ||||||||||||||||||||| ||| |||||||| ||||||||     ||||||||||||||||||||| ||||||| | |||||| ||    
T  26318345 ggagggttcatttttattttttaaattacgaaaaatataaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcaattatcatgttg 26318444  T
Q  442 ttaattcaattttttaaaaatcattttataa 472  Q
    ||||||||||||| ||||| |||||||||||    
T  26318445 ttaattcaattttctaaaagtcattttataa 26318475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 307 - 476
Target Start/End: Complemental strand, 4097480 - 4097305
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt--------- 397  Q
    |||||||||| |||| |||||||||||||||||     ||||| | |||||||||||||||||||||  |||||||||||||||| |||||             
T  4097480 agggtgtgttaggatggagggtttaggagggga-----ggggatgactcacttttattttttaaattgtgaacaatgtaaaatgttttttttttttaaaa 4097386  T
Q  398 --aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 476  Q
      |||||||||||||| ||||||||  ||||||||| |||||| ||||||||||||||| ||||||  |||||||||||||    
T  4097385 ataaattaagtgttttggaagtattgtatgatcatttatcatgttgttaattcaattttctaaaaaatattttataatgtc 4097305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 305 - 438
Target Start/End: Complemental strand, 4097759 - 4097620
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------ta 398  Q
    |||| |||||||||||||||||||||| ||||||||||||||| |||| |||||||| |||||||||||||| ||||| ||| || | ||||      ||    
T  4097759 ttagagtgtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacggacaatataacattttttttccaaaata 4097660  T
Q  399 aattaagtgtttttgaagtattacatgatcattgatcatg 438  Q
    ||||||||||  ||||||||||| |||||| || ||||||    
T  4097659 aattaagtgtgattgaagtattatatgatcgtttatcatg 4097620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 14515467 - 14515542
Alignment:
Q  301 actcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |   |||| ||||||||||||||    
T  14515467 actctaagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacg 14515542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 307 - 511
Target Start/End: Original strand, 10818229 - 10818425
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaagt 406  Q
    |||||||||||||||||||||||||||||||||||||||||||  | | | |||| |||||||||||||| ||||| ||| |||   |||||||     |    
T  10818229 agggtgtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacggacaatataacatg---ttttaaa-----t 10818320  T
Q  407 gtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcc 506  Q
    ||  ||||||||||| ||||||||| |||||| |  ||  | ||| ||||||||| ||||| ||| ||||  ||| ||||||| | || |||| ||||||    
T  10818321 gtgattgaagtattatatgatcatttatcatgttaatatgttaatattttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctcc 10818420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 303 - 491
Target Start/End: Complemental strand, 25468639 - 25468454
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-- 400  Q
    ||||| |||||||||||||| | |||||| ||||| ||||||||| |||  |||||||||| |||| |||||||||||        ||| ||||||||      
T  25468639 tcttaaggtgtgtttggattaatggtttaagagggtaagggagggaaggattcacttttatatttttaattacgaaca--------tgtttttttaaaat 25468548  T
Q  401 ---ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 491  Q
       ||||||||||||||||||||| || |||||| |||| | |||||| | |||||| | ||||| |||||||||||||  ||| |||||||||    
T  25468547 aaattaagtgtttttgaagtattatataatcatttatcacgttgttaaattaattttcttaaaattattttataatgtccataatttaaaaaag 25468454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 307 - 374
Target Start/End: Original strand, 30487306 - 30487373
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaatta 374  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||  || ||||||||    
T  30487306 agggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcattgttaaatta 30487373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 397 - 500
Target Start/End: Original strand, 3841180 - 3841284
Alignment:
Q  397 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaatttttt--aaaaatcattttataatgtctttaaattaaaaaaggaa 494  Q
    ||||||||||||||||||||||||| || |||||| |||||  ||||||||||||||| |  ||||||||||||||||||||  ||| ||||||||| ||    
T  3841180 taaattaagtgtttttgaagtattatatcatcatttatcat-ttgttaattcaattttgtaaaaaaatcattttataatgtccgtaatttaaaaaagaaa 3841278  T
Q  495 tgtaag 500  Q
     |||||    
T  3841279 agtaag 3841284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 304 - 374
Target Start/End: Complemental strand, 12811227 - 12811157
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaatta 374  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||| | |||||| || |||||||||    
T  12811227 cttagggtgtgtttggattgagggtttaggatgggaagagaggggagggattacttttcttctttaaatta 12811157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 406 - 476
Target Start/End: Complemental strand, 15373739 - 15373669
Alignment:
Q  406 tgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 476  Q
    ||||||||| |||||| |||||||||  ||||| ||||||||||||||| |||||||||||||||||||||    
T  15373739 tgtttttgatgtattatatgatcatttgtcatgttgttaattcaattttctaaaaatcattttataatgtc 15373669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 9721138 - 9721207
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| | | ||||  |||||||||||||    
T  9721138 agggtgtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacg 9721207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 308 - 401
Target Start/End: Complemental strand, 10818459 - 10818366
Alignment:
Q  308 gggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaat 401  Q
    |||||||||||||||||| |||||||||||| ||||||||||||| | ||||||  ||||||||||||| ||| | | |||||| |||| ||||    
T  10818459 gggtgtgtttggattgagagtttaggaggggtagggaggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaat 10818366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 314 - 391
Target Start/End: Complemental strand, 34177137 - 34177060
Alignment:
Q  314 gtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgt 391  Q
    |||| |||||| |||||||||  ||||||||||  | | |||||||||||||||||||||||||||||||||||||||    
T  34177137 gtttagattgaaggtttaggaaaggaagggaggaaatgactcacttttattttttaaattacgaacaatgtaaaatgt 34177060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 310 - 376
Target Start/End: Original strand, 9719034 - 9719100
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||||||||||||||||||||||||||||||  | | ||||  |||||||||||||    
T  9719034 gtgtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacg 9719100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 310 - 376
Target Start/End: Complemental strand, 19278278 - 19278213
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||||| |||||||||||||||||||||||||| | | |||| ||||||||||||||    
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggagggttta-ttttcttttttaaattacg 19278213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 315 - 376
Target Start/End: Complemental strand, 23091195 - 23091133
Alignment:
Q  315 tttggattgagggtttaggaggggaagggaggggagggctcactttt-attttttaaattacg 376  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  23091195 tttggatggagggtttaggaggggaagggaggggagggcttacttttctttttttaaattacg 23091133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 310 - 376
Target Start/End: Complemental strand, 30487546 - 30487480
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||| ||||||||||||||||||||||||||| |||||| | | |||||||||||||| ||||    
T  30487546 gtgtgtttcgattgagggtttaggaggggaagggagtggagggtttagttttattttttaaactacg 30487480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 396
Target Start/End: Original strand, 665841 - 665929
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 396  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||| ||| ||||  ||||||||||| ||| | | | |||||||||||    
T  665841 agggtgtgtttggat-gagggtttaggaggggaagtgaggggagggttcatttttcatttttaaattatgaatattatgaaatgtctttt 665929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 302 - 371
Target Start/End: Original strand, 31849105 - 31849174
Alignment:
Q  302 ctcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaa 371  Q
    ||||||| ||||||| |||||||||||||| |||||||||||||||||||| | | |||| |||||||||    
T  31849105 ctcttagagtgtgttaggattgagggtttaagaggggaagggaggggagggtttagttttcttttttaaa 31849174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 406 - 511
Target Start/End: Complemental strand, 34176711 - 34176606
Alignment:
Q  406 tgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctc 505  Q
    |||||||||| ||||| ||||||||| || ||  ||||||||||||||||||||||||| |||||||| |   ||| ||||||||| || ||||| | ||    
T  34176711 tgtttttgaaatattatatgatcatttattatattgttaattcaattttttaaaaatcaatttataattttcgtaatttaaaaaagaaaagtaagtcttc 34176612  T
Q  506 ccctcc 511  Q
    ||||||    
T  34176611 ccctcc 34176606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 4097229 - 4097317
Alignment:
Q  301 actcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 389  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||  ||| | | ||||||||||||| ||| ||| ||| | ||||||    
T  4097229 actctaagggtgtgtttggattgagggtttaggaggggaaggaagatgagagtttacttttattttttgaatcacggacattataaaat 4097317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 308 - 404
Target Start/End: Complemental strand, 9719273 - 9719178
Alignment:
Q  308 gggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaa 404  Q
    |||||||||||||||||||||||| ||||||||| |||||| ||| | | |||| ||||||||||| || || || ||| ||| |||||||||||||    
T  9719273 gggtgtgtttggattgagggtttatgaggggaagagaggggtgggtttaattttcttttttaaattccggactatataacatg-ctttttaaattaa 9719178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 15373776 - 15373737
Alignment:
Q  352 gctcacttttattttttaaattacgaacaatgtaaaatgt 391  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15373776 gctcacttttattttttaaattacgaacaatgtaaaatgt 15373737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 1300623 - 1300661
Alignment:
Q  301 actcttagggtgtgtttggattgagggtttaggagggga 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1300623 actcttagggtgtgtttggattgagggtttaggagggga 1300661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 389
Target Start/End: Complemental strand, 14515719 - 14515633
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 389  Q
    ||||||||||||||||||| |||||||||||||||||||| | ||||||| | |  |||  ||||||||||| ||||| | ||||||    
T  14515719 tcttagggtgtgtttggatggagggtttaggaggggaaggaaagggagggtttagatttcatttttaaattatgaacactataaaat 14515633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 376
Target Start/End: Original strand, 9051530 - 9051603
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||| ||||||||||||| |||||||||| || ||||| || || | |||||| ||||||||||||||    
T  9051530 tcttagggtgcgtttggattgaggatttaggagggaaatggaggagatggtttactttttttttttaaattacg 9051603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 304 - 352
Target Start/End: Complemental strand, 9298738 - 9298690
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggaggg 352  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  9298738 cttagggtgtgtttggatgaaggggttaggaggggaagggaggggaggg 9298690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 375
Target Start/End: Complemental strand, 16738239 - 16738172
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||| | | |||||| |||||||||||||    
T  16738239 agggtttgtttggattgagggtttaggatgggaa-ggaggggagagtttacttttcttttttaaattac 16738172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 398 - 438
Target Start/End: Original strand, 28477076 - 28477116
Alignment:
Q  398 aaattaagtgtttttgaagtattacatgatcattgatcatg 438  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  28477076 aaattaagtgtttttgaagtattacatgatcatttatcatg 28477116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 398 - 438
Target Start/End: Original strand, 29692974 - 29693014
Alignment:
Q  398 aaattaagtgtttttgaagtattacatgatcattgatcatg 438  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  29692974 aaattaagtgtttttgaagtattacatgatcatttatcatg 29693014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 378
Target Start/End: Original strand, 34176586 - 34176642
Alignment:
Q  322 tgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaa 378  Q
    |||||||||||||||||| ||||||||| | || |||||| ||||||||||||||||    
T  34176586 tgagggtttaggaggggatgggaggggaagacttacttttcttttttaaattacgaa 34176642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 5287514 - 5287471
Alignment:
Q  358 ttttattttttaaattacgaacaatgtaaaatgtctttttaaat 401  Q
    ||||||||||||||||||||||||| |||||||| |||||||||    
T  5287514 ttttattttttaaattacgaacaatataaaatgtttttttaaat 5287471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 400
Target Start/End: Complemental strand, 30850153 - 30850063
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 400  Q
    |||||||||||||||||||||||||||| ||| || ||||| | | |||||| | |||||||||| |||  || ||| |||| ||||||||    
T  30850153 gtgtgtttggattgagggtttaggagggaaagagaagggagagtttacttttttattttaaattatgaattatataatatgtttttttaaa 30850063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 303 - 404
Target Start/End: Complemental strand, 9721385 - 9721285
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaatt 402  Q
    |||||||||||||||| |||||||||||| || || ||| |||||| ||| | | |||| ||||||||||| || || || ||| |||| ||||||||||    
T  9721385 tcttagggtgtgtttgaattgagggtttatgaaggtaagagaggggtgggtttaattttcttttttaaattccggaccatataacatgt-tttttaaatt 9721287  T
Q  403 aa 404  Q
    ||    
T  9721286 aa 9721285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 315 - 375
Target Start/End: Complemental strand, 10293484 - 10293424
Alignment:
Q  315 tttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    |||||||  ||||||||||||| ||||||||||||| ||| |||||| ||||| |||||||    
T  10293484 tttggatgaagggtttaggaggagaagggaggggagagcttacttttctttttcaaattac 10293424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 305 - 341
Target Start/End: Complemental strand, 21607090 - 21607054
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaag 341  Q
    |||| ||||||||||||||||||||||||||||||||    
T  21607090 ttagagtgtgtttggattgagggtttaggaggggaag 21607054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 310 - 374
Target Start/End: Complemental strand, 26318546 - 26318482
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaatta 374  Q
    |||||||||||| ||| ||||||||||| ||||||||||| |  | |||||| ||||||||||||    
T  26318546 gtgtgtttggatggagagtttaggagggaaagggaggggaagatttacttttcttttttaaatta 26318482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 1300864 - 1300789
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaat 382  Q
    ||||||||||||||| |||||||| | ||  ||| ||||||||||| | ||||||  ||||||||||||| |||||    
T  1300864 agggtgtgtttggatggagggtttggaagatgaatggaggggagggtttacttttcatttttaaattacggacaat 1300789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 390
Target Start/End: Complemental strand, 3841330 - 3841247
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 390  Q
    |||||||||||||||  ||||||||||||||||||  |  ||| | || |||||| |||||||||||||| ||| | |||||||    
T  3841330 agggtgtgtttggatgaagggtttaggaggggaagaaaatggaagacttacttttcttttttaaattacggacattataaaatg 3841247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 380
Target Start/End: Original strand, 5585304 - 5585375
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcac-ttttattttttaaattacgaaca 380  Q
    |||||||||||| |||||||||||||||||||| | || || | | || |||| ||||||||||||||||||    
T  5585304 gtgtgtttggatggagggtttaggaggggaaggaatggaagagtttactttttcttttttaaattacgaaca 5585375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 312 - 375
Target Start/End: Original strand, 19278039 - 19278102
Alignment:
Q  312 gtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    |||||||||| |||||||||||||||||||| ||| ||| | | ||||||  ||||||||||||    
T  19278039 gtgtttggatggagggtttaggaggggaaggaaggagagagtttacttttcatttttaaattac 19278102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 33235949 - 33236020
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||| |||||||||||| |||||| || |||||||| |||  | | |||||| ||||||||||||||    
T  33235949 ttagggtgtatttggattgaggatttaggtggagaagggagtggaaagtttacttttcttttttaaattacg 33236020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 342 - 396
Target Start/End: Complemental strand, 31849319 - 31849265
Alignment:
Q  342 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 396  Q
    ||||||||||| ||||||||  ||||||||||||| ||| | |||||||||||||    
T  31849319 ggaggggagggttcacttttcatttttaaattacggacactataaaatgtctttt 31849265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 21606854 - 21606886
Alignment:
Q  307 agggtgtgtttggattgagggtttaggagggga 339  Q
    ||||||||||||||| |||||||||||||||||    
T  21606854 agggtgtgtttggatggagggtttaggagggga 21606886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 310 - 350
Target Start/End: Original strand, 33041473 - 33041513
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggag 350  Q
    |||||||||||||| ||||||||||| |||| |||||||||    
T  33041473 gtgtgtttggattgggggtttaggagaggaaaggaggggag 33041513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 7e-57; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 307 - 490
Target Start/End: Original strand, 31061359 - 31061547
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 401  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||     |||||    
T  31061359 agggtgtgtttggattgaaggtttaggaggggaaaggatgggagggctcacttttattttttaaattacgaacaatgtaaaatgtgtttttaaaataaat 31061458  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaa 490  Q
    |||||||||||||| ||||| ||||||||| |||||| |||||||||||||||  |||| ||| |||||||||||| ||| ||||||||    
T  31061459 taagtgtttttgaaatattatatgatcatttatcatgttgttaattcaattttcaaaaagtcactttataatgtctgtaatttaaaaaa 31061547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 307 - 491
Target Start/End: Original strand, 45257307 - 45257496
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 401  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||| |||||||||||||| |||||||||||||||||||||||| || |     |||||    
T  45257307 agggtgtgtttggattgagagtttaggaggggaaaggaagggaggactcacttttattttataaattacgaacaatgtaaaatgttttcttaaaataaat 45257406  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 491  Q
    |||||||||||||||||||| ||||||||| |||||  |||||||||||||||  ||||||||||||||||| ||  ||| |||||||||    
T  45257407 taagtgtttttgaagtattatatgatcatttatcatattgttaattcaattttcaaaaaatcattttataatatccgtaatttaaaaaag 45257496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 305 - 500
Target Start/End: Complemental strand, 42296549 - 42296349
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttta-----a 399  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| | ||||||     |    
T  42296549 ttagggtgtgtttggattgagggattaggaggggaagggaggagagggttcacttttattttttaaattacgaacgatgtaaaatatttttttaaaatga 42296450  T
Q  400 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaa 499  Q
    ||||||||||||| || ||||| ||||||||| || ||| |||||||||| |||| ||||| |||||||||||| ||  ||| ||||||||| || ||||    
T  42296449 attaagtgtttttaaattattatatgatcatttattatgttgttaattcatttttctaaaattcattttataatatccgtaatttaaaaaagaaaagtaa 42296350  T
Q  500 g 500  Q
    |    
T  42296349 g 42296349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 315 - 469
Target Start/End: Original strand, 33265615 - 33265773
Alignment:
Q  315 tttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaattaagtgttt 410  Q
    |||||||||||||||||||||||||||||||| || | |||| |||||||||||||||||||||||||||||||  | ||||    ||||||||||||||    
T  33265615 tttggattgagggtttaggaggggaagggaggcgatgactcatttttattttttaaattacgaacaatgtaaaacattttttaaaataaattaagtgttt 33265714  T
Q  411 ttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcatttta 469  Q
    ||||||||||| ||||||||| |||||  |||||||||||||||  |||||||||||||    
T  33265715 ttgaagtattatatgatcatttatcatattgttaattcaattttcaaaaaatcatttta 33265773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 309 - 472
Target Start/End: Complemental strand, 3094595 - 3094427
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaa---- 404  Q
    |||||||||||||||||||||||||| || ||||||||||| | ||||||||||||||||||||||| ||| ||||||||||| ||| |||| |||        
T  3094595 ggtgtgtttggattgagggtttaggaaggaaagggaggggaagactcacttttattttttaaattacaaactatgtaaaatgtttttctaaaataaattt 3094496  T
Q  405 -gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataa 472  Q
     ||||||||||||||||| ||||| ||| |||||| ||||||||||||||| ||| |||||||||||||    
T  3094495 cgtgtttttgaagtattatatgattatttatcatgttgttaattcaattttctaagaatcattttataa 3094427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 307 - 473
Target Start/End: Complemental strand, 2381231 - 2381060
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 401  Q
    ||||||| ||||||||| ||||||| ||||| | |||||||||| | |||||||||||||||||||||||||||||||||||||| ||||     |||||    
T  2381231 agggtgtatttggattgtgggtttatgagggaatgggaggggagagttcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaat 2381132  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataat 473  Q
    |||||||||||||||||||| || |||||  |||||| ||| ||||||||||| ||||| ||||||||||||    
T  2381131 taagtgtttttgaagtattatatcatcatcaatcatgttgtcaattcaattttctaaaattcattttataat 2381060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 308 - 490
Target Start/End: Complemental strand, 1053000 - 1052811
Alignment:
Q  308 gggtgtgtttggattgagggtttaggag-gggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------taaa 400  Q
    |||||| ||||||||||| ||||||||| ||||| |||| |||| |||||||||||||||||||||||||||||||||||||||| ||||      ||||    
T  1053000 gggtgtatttggattgagagtttaggagcgggaaaggagaggagagctcacttttattttttaaattacgaacaatgtaaaatgtttttttttaaataaa 1052901  T
Q  401 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaa 490  Q
    |||| |||||||||| ||||| | ||||||| |||||| ||||||||||||||| ||||||| |||||||||| ||  ||| ||||||||    
T  1052900 ttaaatgtttttgaaatattatacgatcatttatcatgttgttaattcaattttctaaaaattattttataatatcgataatttaaaaaa 1052811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 314 - 469
Target Start/End: Complemental strand, 31928286 - 31928121
Alignment:
Q  314 gtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----------taaatta 403  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||| ||||          |||||||    
T  31928286 gtttggatcgagggtttaggaggggaagggaagggagggctcacttttaatttttaaattacaaacaatgtaaaatgtttttttttttttaaataaatta 31928187  T
Q  404 agtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcatttta 469  Q
    |||||||||||||||||| ||||||||| |||||| | |||||||||||||  |||||||||||||    
T  31928186 agtgtttttgaagtattatatgatcatttatcatgttattaattcaattttaaaaaaatcatttta 31928121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 307 - 476
Target Start/End: Original strand, 34187575 - 34187751
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 401  Q
    ||||||||||||||||||| ||||||||| |||||| |||||| || ||||||||| |||||||||||||||||| |||| |||| || |     |||||    
T  34187575 agggtgtgtttggattgagagtttaggagtggaaggaaggggaaggttcacttttaatttttaaattacgaacaacgtaagatgttttattaaaataaat 34187674  T
Q  402 taagtgtttttgaagtat--tacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 476  Q
    ||||||||||||||||||  || || |||||| |||||| ||||||||||||||| |||||||||||||||||||||    
T  34187675 taagtgtttttgaagtattatatataatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtc 34187751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 341 - 476
Target Start/End: Complemental strand, 15085911 - 15085770
Alignment:
Q  341 gggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------taaattaagtgtttttgaagtattacatgatcattgat 434  Q
    |||| |||||||||| |||||||||||||||||||||||||| |||||| | ||||      ||||||||||||||||||||||||| ||||||||| ||    
T  15085911 gggatgggagggctcgcttttattttttaaattacgaacaatataaaatattttttaaaaaataaattaagtgtttttgaagtattatatgatcatttat 15085812  T
Q  435 catgctgttaattcaattttttaaaaatcattttataatgtc 476  Q
    || | ||||||||||||||| |||||||||||||||||||||    
T  15085811 caagttgttaattcaattttctaaaaatcattttataatgtc 15085770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 307 - 429
Target Start/End: Complemental strand, 1270522 - 1270394
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------taaa 400  Q
    |||||| ||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||      ||||    
T  1270522 agggtgcgtttggattgaggatttaggaggacaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttttaaataaa 1270423  T
Q  401 ttaagtgtttttgaagtattacatgatca 429  Q
    ||||||||||||||||| ||| |||||||    
T  1270422 ttaagtgtttttgaagtgttatatgatca 1270394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 311 - 489
Target Start/End: Original strand, 35325271 - 35325456
Alignment:
Q  311 tgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt-------aaatta 403  Q
    |||||||  |||||||||||||||| | || | |||| | | || ||||||||||||| |||||||||||||||||||| | |||||       ||||||    
T  35325271 tgtgtttaaattgagggtttaggagagaaatgaagggaatgacttacttttatttttttaattacgaacaatgtaaaatatatttttttaaaataaatta 35325370  T
Q  404 agtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaa 489  Q
    ||| |||||||||||||| ||||||||| |||||| | ||||||||||||||||||||| ||||||||||||| |||| |||||||    
T  35325371 agtatttttgaagtattatatgatcatttatcatgttattaattcaattttttaaaaattattttataatgtcgttaatttaaaaa 35325456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 45098218 - 45098355
Alignment:
Q  356 acttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaa 450  Q
    |||||||||||||| ||||| || |||||||||||| ||||||||     ||||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  45098218 acttttattttttacattacaaataatgtaaaatgtatttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaa 45098317  T
Q  451 ttttttaaaaatcattttataatgtctttaaattaaaa 488  Q
    ||||| ||||| ||||||||||||||| ||| ||||||    
T  45098318 tttttcaaaaaccattttataatgtctgtaatttaaaa 45098355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 304 - 421
Target Start/End: Complemental strand, 17334059 - 17333936
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttatt-ttttaaattacgaacaatgtaaaatgtctttt-----t 397  Q
    |||||||||| |||| ||||||||||||||||||||||| |||||||| |||||||||||| |||||| |||| ||||||||||||||||||||     |    
T  17334059 cttagggtgtttttgaattgagggtttaggaggggaaggaaggggaggactcacttttatttttttaagttacaaacaatgtaaaatgtctttttaaaat 17333960  T
Q  398 aaattaagtgtttttgaagtatta 421  Q
    ||||||||||||||||||||||||    
T  17333959 aaattaagtgtttttgaagtatta 17333936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 22356250 - 22356179
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  22356250 ttagggtgtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacg 22356179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 307 - 396
Target Start/End: Complemental strand, 23748339 - 23748250
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 396  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||  |||||||| |||| ||| | | |||||||||||    
T  23748339 agggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcatttttaaactacggacactatgaaatgtctttt 23748250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 403 - 515
Target Start/End: Complemental strand, 36052230 - 36052118
Alignment:
Q  403 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagcc 502  Q
    ||||||||||||||||| | ||||||||  || ||| ||||||||||||||| |||||||||||||||||||| | ||| |||||| || || ||||| |    
T  36052230 aagtgtttttgaagtatcatatgatcatgtatgatgttgttaattcaattttctaaaaatcattttataatgtatgtaatttaaaatagaaaagtaagtc 36052131  T
Q  503 ctcccctcctaaa 515  Q
     ||||||||||||    
T  36052130 gtcccctcctaaa 36052118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 305 - 372
Target Start/End: Original strand, 35736173 - 35736240
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaat 372  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  35736173 ttagggtgtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaat 35736240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 36347787 - 36347716
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| | | |||||| ||||||||||||||    
T  36347787 ttagggtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacg 36347716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 307 - 373
Target Start/End: Complemental strand, 35736431 - 35736365
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaatt 373  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||  ||||||||||    
T  35736431 agggtgtgtttggatggagggtttaggaggtgaagggaggggagggctcacttttcgtttttaaatt 35736365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 17379842 - 17379891
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggaggg 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17379842 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggaggg 17379891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 307 - 431
Target Start/End: Original strand, 41778773 - 41778902
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 401  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| | |||||| |  ||||||||| | ||| | |||||||| ||||     |||||    
T  41778773 agggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttgtactttaaattatggacagtataaaatgtttttttaaaataaat 41778872  T
Q  402 taagtgtttttgaagtattacatgatcatt 431  Q
    |||||||  ||||||||||| |||||||||    
T  41778873 taagtgtgattgaagtattatatgatcatt 41778902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 307 - 438
Target Start/End: Complemental strand, 15224938 - 15224802
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt-----ttaaat 401  Q
    |||||||||||||||  |||||||||||||||||||||||||| || | |||||| ||||||||||||||  | || ||| |||| |||      |||||    
T  15224938 agggtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaattacgggctatataacatgtttttctagaataaat 15224839  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatg 438  Q
    |||||||  ||||||||||| ||||||||| ||||||    
T  15224838 taagtgtgattgaagtattatatgatcatttatcatg 15224802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 307 - 390
Target Start/End: Complemental strand, 42813864 - 42813781
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 390  Q
    |||||||||||||||  |||||||||||||||||| ||||||| |||| | |||| |||||||||||||||||| | |||||||    
T  42813864 agggtgtgtttggatgaagggtttaggaggggaagagaggggatggcttatttttcttttttaaattacgaacattataaaatg 42813781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 309 - 438
Target Start/End: Original strand, 16713494 - 16713628
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt-----aaatta 403  Q
    ||||||||| ||||||||||||| |||||||||||| ||||  | ||| ||||| ||||||||||||| ||||| |||||| | |||||     ||||||    
T  16713494 ggtgtgttttgattgagggtttaagaggggaagggaagggatagttcaattttaatttttaaattacgtacaatataaaatatttttttaaaagaaatta 16713593  T
Q  404 agtgtttttgaagtattacatgatcattgatcatg 438  Q
     ||||||||||||||||| ||  ||||| ||||||    
T  16713594 tgtgtttttgaagtattatatattcatttatcatg 16713628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 399 - 476
Target Start/End: Complemental strand, 8554446 - 8554369
Alignment:
Q  399 aattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 476  Q
    |||| |||||||||||||||||  | ||||||| |||||| |||||||||||||||| |||||| |||||||||||||    
T  8554446 aattgagtgtttttgaagtattgtacgatcatttatcatgatgttaattcaatttttaaaaaattattttataatgtc 8554369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 358 - 430
Target Start/End: Original strand, 22356016 - 22356093
Alignment:
Q  358 ttttattttttaaattacgaacaatgtaaaatgtctttttaa-----attaagtgtttttgaagtattacatgatcat 430  Q
    |||||||||||||||||||||||||||||||||| |||||||     |||||||||||||||||||||| || |||||    
T  22356016 ttttattttttaaattacgaacaatgtaaaatgtttttttaaaatagattaagtgtttttgaagtattatatcatcat 22356093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 307 - 437
Target Start/End: Original strand, 886919 - 887051
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 401  Q
    |||||||||| || |||||||||||||||||||||| | ||||||||| |||||| |||||||||||||  ||||| |||||||  ||||     |||||    
T  886919 agggtgtgttggg-ttgagggtttaggaggggaaggtaagggagggcttacttttcttttttaaattac--acaatataaaatgcttttttaaaataaat 887015  T
Q  402 taagtgtttttgaagtattacatgatcattgatcat 437  Q
    || ||||  ||||||||||| ||||||||| |||||    
T  887016 tatgtgtgattgaagtattatatgatcatttatcat 887051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 304 - 376
Target Start/End: Complemental strand, 887356 - 887285
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||| ||| |||||| ||||||||||||||    
T  887356 cttagggtgtgtctggat-gaaggtttaggaggggaagggaggggagcgcttacttttcttttttaaattacg 887285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 398 - 503
Target Start/End: Original strand, 9313079 - 9313188
Alignment:
Q  398 aaattaagtgtttttgaagtattacat----gatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaagga 493  Q
    |||||||||||||||||||||| | ||    ||||||| |||| | |||||||||||||||  ||||||||||||||||||||| ||| ||||||| | |    
T  9313079 aaattaagtgtttttgaagtataatatgatcgatcatttatcaagttgttaattcaattttcgaaaaatcattttataatgtctgtaatttaaaaaggaa 9313178  T
Q  494 atgtaagccc 503  Q
    | ||||||||    
T  9313179 aagtaagccc 9313188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 342 - 473
Target Start/End: Original strand, 21502067 - 21502204
Alignment:
Q  342 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt-------aaattaagtgtttttgaagtattacatgatcattgat 434  Q
    ||||||||||| |||  ||||||||| |||||||||||||| |||||| | |||||       |||||||||||||||||||||||| |||| |||| ||    
T  21502067 ggaggggagggttcagatttattttt-aaattacgaacaatataaaatattttttttaaaaataaattaagtgtttttgaagtattatatgaccatttat 21502165  T
Q  435 catgctgttaattcaattttttaaaaatcattttataat 473  Q
    | || ||||||| ||||||| | ||||| ||||||||||    
T  21502166 cttgttgttaatgcaattttcttaaaattattttataat 21502204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 302 - 420
Target Start/End: Complemental strand, 23740005 - 23739882
Alignment:
Q  302 ctcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----- 396  Q
    |||||| | |||||||| || |||| |||||||||| ||| | | |||||||| || |||||||||||||||||||| || ||||||||| ||||         
T  23740005 ctcttaagatgtgtttgaatcgaggatttaggagggaaagagggaggagggctaacatttattttttaaattacgaaaaaagtaaaatgtttttttaaaa 23739906  T
Q  397 taaattaagtgtttttgaagtatt 420  Q
    |||||||| |||||||||||||||    
T  23739905 taaattaaatgtttttgaagtatt 23739882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 309 - 376
Target Start/End: Complemental strand, 36046443 - 36046377
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||||||||||| ||||||||||||||||| || | |||||| ||||||||||||||    
T  36046443 ggtgtgtttggattgagggtttatgaggggaagggagggga-ggtttacttttgttttttaaattacg 36046377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 302 - 371
Target Start/End: Original strand, 2380987 - 2381057
Alignment:
Q  302 ctcttagggtgtgtttggattgagggtttaggaggggaa-gggaggggagggctcacttttattttttaaa 371  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||||||||| |||| |||| |||||||||    
T  2380987 ctcttaggatgtgtttggatagagggtttaggaggggaaggggaggggaggactcatttttcttttttaaa 2381057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 408 - 510
Target Start/End: Original strand, 42813726 - 42813828
Alignment:
Q  408 tttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctccc 507  Q
    ||||| |||||||| ||||| ||| |||| | ||||||||||||||| ||||||||||||||||||||   ||| ||||||||| ||  |||||| ||||    
T  42813726 tttttaaagtattatatgattatttatcaggttgttaattcaattttctaaaaatcattttataatgttcgtaatttaaaaaagaaaaataagccatccc 42813825  T
Q  508 ctc 510  Q
    |||    
T  42813826 ctc 42813828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 45257553 - 45257482
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||||| |||| ||||||| ||||||||||| || || | |||||| ||||||||||||||    
T  45257553 ttagggtgtgtttggatggaggttttaggatgggaagggaggagatggtttacttttcttttttaaattacg 45257482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 17380085 - 17380043
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggagggga 349  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  17380085 agggtgtgtttggattgagggtttaggaggggaagtgagggga 17380043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 310 - 376
Target Start/End: Original strand, 31795772 - 31795838
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||| ||||||||| |||| |||||||||||||| || ||||||  |||||||||||||    
T  31795772 gtgtgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacg 31795838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 376
Target Start/End: Complemental strand, 9631804 - 9631735
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||| ||||||||||||||| |||||||  ||||| | ||||||  |||||||||||||    
T  9631804 agggtgtgtttggatggagggtttaggagggaaagggagaagagggttaacttttcgtttttaaattacg 9631735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 40022359 - 40022407
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggaggg 352  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  40022359 tcttagggtgtgtttggattgagggtttaggagggtaaggg-ggggaggg 40022407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 8427110 - 8427051
Alignment:
Q  312 gtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaa 371  Q
    |||||||||||||||||||||||||| |||||||||||| | | ||||||  ||||||||    
T  8427110 gtgtttggattgagggtttaggagggaaagggaggggagagtttacttttcatttttaaa 8427051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 401
Target Start/End: Complemental strand, 14196878 - 14196819
Alignment:
Q  342 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaat 401  Q
    ||||||||||||| |||||| |||||||||||||||||| | |||||||| |||| ||||    
T  14196878 ggaggggagggcttacttttcttttttaaattacgaacactataaaatgttttttaaaat 14196819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 31061598 - 31061543
Alignment:
Q  313 tgtttggattgagggtttaggaggggaagggaggggagggctcacttttatttttt 368  Q
    |||||||||||||||||||||||||||| ||||||||||  | |||||| ||||||    
T  31061598 tgtttggattgagggtttaggaggggaatggaggggaggatttacttttctttttt 31061543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 375
Target Start/End: Original strand, 9426987 - 9427053
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    ||||||||||||||||  |||||||||||||||||||| ||||| |   |||| |||||||||||||    
T  9426987 ggtgtgtttggattgaaagtttaggaggggaagggaggagagggtttgattttcttttttaaattac 9427053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 350
Target Start/End: Original strand, 15224142 - 15224188
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggag 350  Q
    |||||||||  ||||||| ||||||||||||||||||||||||||||    
T  15224142 cttagggtgcctttggatggagggtttaggaggggaagggaggggag 15224188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 347
Target Start/End: Complemental strand, 31796010 - 31795968
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggg 347  Q
    ||||||| |||||||||||| ||||||||||||||||||||||    
T  31796010 ttagggtttgtttggattgaaggtttaggaggggaagggaggg 31795968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 390
Target Start/End: Complemental strand, 33265813 - 33265767
Alignment:
Q  344 aggggagggctcacttttattttttaaattacgaacaatgtaaaatg 390  Q
    |||||||| ||| |||||||||||||||||| |||||||||||||||    
T  33265813 aggggaggactcgcttttattttttaaattatgaacaatgtaaaatg 33265767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 375
Target Start/End: Original strand, 41841684 - 41841750
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    |||||||||||||||||| |||||||||| |||||| ||||||| |   |||| |||||||||||||    
T  41841684 ggtgtgtttggattgaggatttaggagggaaagggatgggagggtttgattttcttttttaaattac 41841750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 374
Target Start/End: Original strand, 8426881 - 8426946
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaatta 374  Q
    ||||| |||| || ||| |||||||||||||||||| ||||||| | ||||||| |||||||||||    
T  8426881 ggtgtatttgaatggagagtttaggaggggaagggaagggagggtttacttttaatttttaaatta 8426946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 36347541 - 36347610
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||||  ||||||||||||||||||||| | ||| | ||||||||  |||||| ||||||    
T  36347541 agggtgtgtttggatgaagggtttaggaggggaagggaagagagagttcacttttcatttttatattacg 36347610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 36046205 - 36046273
Alignment:
Q  308 gggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||| ||||||||||||||||||  |||||||| | | | ||||  |||||||||||||    
T  36046205 gggtgtgtttggatggagggtttaggaggggaaatgaggggagagtttatttttcatttttaaattacg 36046273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 376
Target Start/End: Original strand, 2241413 - 2241479
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||| ||||||||||| |||||||||||||||||||| | | |||||| | || |||||||||    
T  2241413 ggtgtgtttagattgagggtt-aggaggggaagggaggggagagtttacttttttattataaattacg 2241479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 356
Target Start/End: Complemental strand, 8554497 - 8554446
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctca 356  Q
    ||||||||||||||||||||  ||||| |||||||| |||||||||| ||||    
T  8554497 ttagggtgtgtttggattgaaagtttaagaggggaatggaggggaggactca 8554446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 345
Target Start/End: Original strand, 12541773 - 12541808
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggag 345  Q
    |||||||||||||||||||||||||||||| |||||    
T  12541773 gtgtgtttggattgagggtttaggaggggaggggag 12541808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 370
Target Start/End: Original strand, 17331415 - 17331478
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaa 370  Q
    |||||||||||| |  ||||||| |||||||||| ||||||||||| | |||||| ||||||||    
T  17331415 agggtgtgtttgcaaagagggttaaggaggggaaaggaggggagggtttacttttcttttttaa 17331478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 400
Target Start/End: Complemental strand, 40022615 - 40022524
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 400  Q
    |||||| |||||| ||||||||| |||| ||||||||||||||| | || |||  ||||||||||||  ||| | | |||||| ||||||||    
T  40022615 ggtgtgcttggatggagggtttaagaggagaagggaggggagggtttacatttcatttttaaattacagacactatgaaatgtttttttaaa 40022524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 23748103 - 23748137
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggagggga 339  Q
    ||||||||||||||||| |||||||||||||||||    
T  23748103 ttagggtgtgtttggatcgagggtttaggagggga 23748137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 511
Target Start/End: Complemental strand, 31795918 - 31795804
Alignment:
Q  397 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatg 496  Q
    ||||||||||||  ||||||||||| |||||| || |||||| ||||| || | ||||| ||||| | ||| ||| ||||  ||| ||||||| | || |    
T  31795918 taaattaagtgtgattgaagtattatatgatcgtttatcatgttgttattttattttttaaaaaaacttttcatagtgtccgtaatttaaaaacgaaaag 31795819  T
Q  497 taagccctcccctcc 511  Q
    |||| ||||||||||    
T  31795818 taagtcctcccctcc 31795804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 310 - 340
Target Start/End: Complemental strand, 36567093 - 36567063
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaa 340  Q
    |||||||||||||||||||||||||||||||    
T  36567093 gtgtgtttggattgagggtttaggaggggaa 36567063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 337
Target Start/End: Complemental strand, 9427233 - 9427200
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggg 337  Q
    |||||||||||||||||||||||||| |||||||    
T  9427233 cttagggtgtgtttggattgagggttcaggaggg 9427200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 346
Target Start/End: Complemental strand, 16713771 - 16713730
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggagg 346  Q
    ||||||||||||||||| ||||||||||||  ||||||||||    
T  16713771 ttagggtgtgtttggatggagggtttaggaaaggaagggagg 16713730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 347
Target Start/End: Complemental strand, 19567057 - 19567020
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggg 347  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  19567057 gtgtgtttggattgagggtttaggagaggaggggaggg 19567020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 453 - 509
Target Start/End: Complemental strand, 14187167 - 14187111
Alignment:
Q  453 ttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccct 509  Q
    |||| |||| ||||||||||||| | ||| ||||||||| || ||||||||||||||    
T  14187167 ttttcaaaaacattttataatgtttataatttaaaaaagaaaagtaagccctcccct 14187111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 305 - 431
Target Start/End: Complemental strand, 21662456 - 21662324
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggagg--ggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaat- 401  Q
    ||||||| ||||||||| |||||||| |||||||| ||||||  ||||| || |||||| | ||||||| ||   ||| |||||||||| |||| ||||     
T  21662456 ttagggtatgtttggatggagggttttggaggggaggggaggcgggaggccttacttttctcttttaaagtatagacactgtaaaatgttttttaaaatc 21662357  T
Q  402 ---taagtgtttttgaagtattacatgatcatt 431  Q
       ||||| |  ||||||||||| |||||||||    
T  21662356 aattaagtttgattgaagtattatatgatcatt 21662324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 440 - 472
Target Start/End: Original strand, 22356141 - 22356173
Alignment:
Q  440 tgttaattcaattttttaaaaatcattttataa 472  Q
    ||||||||||||||| |||||||||||||||||    
T  22356141 tgttaattcaattttctaaaaatcattttataa 22356173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 7e-54; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 307 - 536
Target Start/End: Original strand, 41414078 - 41414313
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaagt 406  Q
    ||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||| ||| |    
T  41414078 agggtatgtttagattgagggtttaggagggaaagggaggggagggctcacttttattttttaaattatgaacaaggtaaaatgtttttttaaaataaat 41414177  T
Q  407 -----gtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaatt-aaaaaaggaatgtaag 500  Q
         ||||||||||||||| ||||||||| |||||| |||||| |||||||| |||||||||||||||||||||  | | || ||||||| || ||||     
T  41414178 caagcgtttttgaagtattatatgatcatttatcatgttgttaactcaattttctaaaaatcattttataatgtccctgatttaaaaaaagaaaagtaaa 41414277  T
Q  501 ccctcccctcctaaaccctcttcccaaacacaccct 536  Q
    | |||||||||||||||| |   |||||||||||||    
T  41414278 cactcccctcctaaacccaccatccaaacacaccct 41414313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 346 - 535
Target Start/End: Original strand, 40858604 - 40858798
Alignment:
Q  346 gggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaa-----gtgtttttgaagtattacatgatcattgatcatgct 440  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||     ||||||||||||||||| ||||||||| |||||| |    
T  40858604 gggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaatttagtgtttttgaagtattatatgatcatttatcatgtt 40858703  T
Q  441 gttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttcccaaacacaccc 535  Q
    ||||||||||||||  ||| ||||||||||||||||  ||| ||||||||| ||  ||| ||||||||||||||||||||   ||||||||||||    
T  40858704 gttaattcaattttcaaaagatcattttataatgtccgtaatttaaaaaagaaaactaaaccctcccctcctaaaccctccatccaaacacaccc 40858798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 313 - 509
Target Start/End: Complemental strand, 16884209 - 16884010
Alignment:
Q  313 tgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtg 407  Q
    ||||||||||||||||||||||| |||||||| |  | | |||||||||||||||||| |||||||||||||||||||||||||     |||||||||||    
T  16884209 tgtttggattgagggtttaggagaggaagggatgataagactcacttttattttttaagttacgaacaatgtaaaatgtctttttaaaataaattaagtg 16884110  T
Q  408 tttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctccc 507  Q
    |||||||||||||| ||||||||| |||||| |||| |||||||||||||||| |  |||||| || | | ||||||||||||| |||||||||||||||    
T  16884109 tttttgaagtattatatgatcatttatcatgttgtt-attcaattttttaaaattttttttat-atatttgtaaattaaaaaagaaatgtaagccctccc 16884012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 305 - 511
Target Start/End: Original strand, 34641000 - 34641199
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 399  Q
    |||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||| |  ||||     |||    
T  34641000 ttagggtgtgtttggattgagggtttaggag----------gggagggctcacttttattttttaaattacgaacaatgtaaaaggattttttaaaataa 34641089  T
Q  400 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaa 499  Q
    |||||||||||||||||||||| ||||||||| |||||| ||||||||||||||| |  ||||||||||||||||||  ||| ||||||||| || ||||    
T  34641090 attaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttct--aaatcattttataatgtccgtaatttaaaaaagaaaagtaa 34641187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 313 - 491
Target Start/End: Complemental strand, 10943852 - 10943669
Alignment:
Q  313 tgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtg 407  Q
    ||||||||||||||||||| ||||| ||| |||||||||| ||||||||| |||||||||||||||||||| ||||||| ||||     |||||||||||    
T  10943852 tgtttggattgagggtttatgagggaaagagaggggagggttcacttttaatttttaaattacgaacaatgcaaaatgtttttttaaaataaattaagtg 10943753  T
Q  408 tttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 491  Q
    |||||||||||||| || || ||| || ||| ||||||||||||||| |||||||||||||||||| ||| ||| |||||||||    
T  10943752 tttttgaagtattatataattatttattatgttgttaattcaattttctaaaaatcattttataatatctataatttaaaaaag 10943669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 311 - 491
Target Start/End: Complemental strand, 17474446 - 17474261
Alignment:
Q  311 tgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaag 405  Q
    ||||||||||||||||||| |||||||||||||||||||| | | ||||||||||||||||||||||| |||||||||| | ||||     |||||||||    
T  17474446 tgtgtttggattgagggttgaggaggggaagggaggggagagttaacttttattttttaaattacgaataatgtaaaatattttttaaaaataaattaag 17474347  T
Q  406 tgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 491  Q
    ||||||||||||||||  |||| ||| |||||  |||||||||||||||| |||||| |||||||||||||  ||| |||||||||    
T  17474346 tgtttttgaagtattatttgattatttatcatattgttaattcaatttttaaaaaattattttataatgtccgtaatttaaaaaag 17474261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 310 - 488
Target Start/End: Complemental strand, 21090312 - 21090129
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaa 404  Q
    ||||||||||||||| |||||||||| |||||||||| |||| |||||||||||||||||||||| |||||||||||||| | ||||     ||||||||    
T  21090312 gtgtgtttggattgatggtttaggagaggaagggaggagaggactcacttttattttttaaattatgaacaatgtaaaatatttttttaaaataaattaa 21090213  T
Q  405 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaa 488  Q
    ||||||||||||||||| ||||| ||  |||||| |||||||||||||||  ||||||| ||||||||| ||| ||| ||||||    
T  21090212 gtgtttttgaagtattatatgataatatatcatgttgttaattcaattttcaaaaaatcgttttataatatctgtaatttaaaa 21090129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 342 - 536
Target Start/End: Original strand, 48683647 - 48683848
Alignment:
Q  342 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtattacatgatcattgatc- 435  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||     ||||||||||||||||||| ||||| ||||||||| |||     
T  48683647 ggaggggaggactcacttttatttcttaaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaaatattatatgatcatttatca 48683746  T
Q  436 atgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag-gaatgtaagccctcccctcctaaaccctcttcccaaacacacc 534  Q
    ||| ||||||||||||||  ||||||||||||||||||||   ||| |||||||||  ||  ||| |||||||||||||||||||||  |||||||||||    
T  48683747 atgttgttaattcaatttcctaaaaatcattttataatgttcgtaatttaaaaaagaaaaaataaaccctcccctcctaaaccctctatccaaacacacc 48683846  T
Q  535 ct 536  Q
    ||    
T  48683847 ct 48683848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 307 - 469
Target Start/End: Original strand, 44412361 - 44412528
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 401  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| |||| ||||  |||||||||||||||||||||||||  | ||||     |||||    
T  44412361 agggtgtgtttgaattgagggtttaggaggggaagagaggggaggactcattttttatttttaaattacgaacaatgtaaaacatttttttaaaataaat 44412460  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcatttta 469  Q
    |||||||||||||||||||| ||||| ||| |||||| |||||||||||||||  |||||||||||||    
T  44412461 taagtgtttttgaagtattatatgatgatttatcatgttgttaattcaattttcaaaaaatcatttta 44412528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 307 - 491
Target Start/End: Original strand, 24253721 - 24253911
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaaggga-ggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaa 400  Q
    ||||||||||||||||||||||||||||||| |||||| |||||| | ||||||||| ||||||||||| || |||||||||||   ||||     ||||    
T  24253721 agggtgtgtttggattgagggtttaggagggaaagggagggggagtgttcacttttaatttttaaattatgagcaatgtaaaataattttttaaaataaa 24253820  T
Q  401 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 491  Q
    ||||||||||||||||| ||| || |||||| |||||| ||||||||||| ||| ||||| |||||||||||||||  ||| |||||||||    
T  24253821 ttaagtgtttttgaagtgttatataatcatttatcatgttgttaattcaactttctaaaactcattttataatgtccgtaatttaaaaaag 24253911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 309 - 520
Target Start/End: Original strand, 42772046 - 42772250
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaagtgt 408  Q
    |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||      |  ||||        ||||||||||||    
T  42772046 ggtgtgtttggattgaaggtttaagaggggaagggaggggaggactcacttttattttttaaattacttttttttgaaaaa-------taaattaagtgt 42772138  T
Q  409 ttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccc 508  Q
    ||||||||||||| ||||||||| |||||| |||||||||||||||  ||||||||||||||||||||  ||| || || ||| || |||| || |||||    
T  42772139 ttttgaagtattatatgatcatttatcatgttgttaattcaattttcaaaaaatcattttataatgtccgtaattttaagaagcaaagtaaaccttcccc 42772238  T
Q  509 tcctaaaccctc 520  Q
    ||||||||||||    
T  42772239 tcctaaaccctc 42772250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 312 - 511
Target Start/End: Original strand, 26135807 - 26136006
Alignment:
Q  312 gtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagt 406  Q
    ||||||||||||||||||||||| | |||||||||      |||||||||||||||||||||| |||||||||||||||| ||||     ||||||||||    
T  26135807 gtgtttggattgagggtttaggaagagaagggagga-----ctcacttttattttttaaattatgaacaatgtaaaatgttttttaaaaataaattaagt 26135901  T
Q  407 gtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcc 506  Q
    ||||||||||||||| || || ||| |||||  |||||||||||||||  |||||| |||||||||||||  ||| ||||||||| || |||| ||||||    
T  26135902 gtttttgaagtattatataattatttatcatattgttaattcaattttcaaaaaattattttataatgtccgtaatttaaaaaagaaaagtaaaccctcc 26136001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 319 - 507
Target Start/End: Complemental strand, 18086218 - 18086019
Alignment:
Q  319 gattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt----------aaattaagtgt 408  Q
    ||||||||||||| ||||||| ||||||| | |||||||| |||||||||||||||| ||||||||||| ||| |||||          |||||||||||    
T  18086218 gattgagggtttatgaggggatgggagggtaaggctcactattattttttaaattactaacaatgtaaattgttttttttttctcaaataaattaagtgt 18086119  T
Q  409 ttttgaagtattacatgatcattg-atcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctccc 507  Q
    ||||||||||||  |||||||||  || ||| ||||||||||||||| |||||| ||||||||||||||| ||| ||||||||| || |||||| |||||    
T  18086118 ttttgaagtattttatgatcattttattatgttgttaattcaattttctaaaaaacattttataatgtctgtaatttaaaaaagaaaagtaagctctccc 18086019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 300 - 461
Target Start/End: Complemental strand, 27197900 - 27197734
Alignment:
Q  300 cactcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt--- 396  Q
    |||||| |||||||||||| ||||| |||||| ||| ||||| ||  ||||| |||||||||||||||||||||||||||||||||| || | ||||       
T  27197900 cactctaagggtgtgtttgaattgaaggtttaagagaggaagagaaaggaggactcacttttattttttaaattacgaacaatgtaacatatttttttaa 27197801  T
Q  397 --taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaa 461  Q
      |||||||||| | ||| |||||||| ||||||||  |||||| ||||||||||||||| ||||||    
T  27197800 aataaattaagtatatttaaagtattatatgatcatctatcatgttgttaattcaattttctaaaaa 27197734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 309 - 390
Target Start/End: Complemental strand, 44412603 - 44412522
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 390  Q
    |||||||||||||||| |||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44412603 ggtgtgtttggattgatggtttgtgaggggaagggaggggaggactcacttttattttttaaattacgaacaatgtaaaatg 44412522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 348 - 510
Target Start/End: Complemental strand, 8432462 - 8432297
Alignment:
Q  348 gagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatcatgctgt 442  Q
    ||||| ||| ||||| |||||||| ||||||||||| ||||||| ||||||||     ||||||||||||||||||||| |  || ||| |||||| |||    
T  8432462 gagggttcaattttaatttttaaactacgaacaatgaaaaatgtttttttaaaatgaattaagtgtttttgaagtattataaaattatttatcatgttgt 8432363  T
Q  443 taattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctc 510  Q
    |||||||||||| |||||||||||||||||||||| ||| | ||||||  || ||||| |||||||||    
T  8432362 taattcaattttgtaaaaatcattttataatgtctgtaattaaaaaaa--aaagtaagtcctcccctc 8432297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 342 - 469
Target Start/End: Original strand, 46978462 - 46978594
Alignment:
Q  342 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatca 436  Q
    ||||||||||| ||||||||| ||||||||||||||||  |||||||||| ||||||||     |||| |||||||||||||||| || |||||| ||||    
T  46978462 ggaggggagggttcacttttaatttttaaattacgaacggtgtaaaatgtttttttaaaataaattaaatgtttttgaagtattatataatcatttatca 46978561  T
Q  437 tgctgttaattcaattttttaaaaatcatttta 469  Q
    || |||||||| |||||| ||||||||||||||    
T  46978562 tgttgttaattaaattttataaaaatcatttta 46978594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 342 - 489
Target Start/End: Complemental strand, 42699821 - 42699669
Alignment:
Q  342 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtattacatgatcattgatca 436  Q
    |||||||||| |||||||||  ||||||||||||||||||| |||||| | |||      ||||||||||||||||||||||||| ||||||||| ||||    
T  42699821 ggaggggaggactcactttttgtttttaaattacgaacaatataaaatatttttaaaaaataaattaagtgtttttgaagtattatatgatcatttatca 42699722  T
Q  437 tgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaa 489  Q
    |  || |||||||||||| ||||| | |||||||||||||  ||| |||||||    
T  42699721 tattgataattcaattttctaaaatttattttataatgtccataatttaaaaa 42699669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 307 - 390
Target Start/End: Complemental strand, 34641234 - 34641151
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 390  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||| | |||||||    
T  34641234 agggtgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacggacattataaaatg 34641151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 28582755 - 28582684
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||| | |||||| ||||||||||||||    
T  28582755 ttagggtgtgtttggactgaggatttaggaggggaagggaggggagggtttacttttcttttttaaattacg 28582684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 307 - 400
Target Start/End: Original strand, 24560217 - 24560310
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 400  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |   |||| |||||||||||||| || |||||| |||| ||| ||||    
T  24560217 agggtgtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggactatgtaacatgtttttctaaa 24560310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 305 - 387
Target Start/End: Complemental strand, 5962014 - 5961933
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaa 387  Q
    |||||||||||||| ||||||||||||||| ||||||||||| || | ||||||||| ||||| ||||||| |||||||||||    
T  5962014 ttagggtgtgtttgtattgagggtttagga-gggaagggaggtgaagactcacttttgtttttaaaattacaaacaatgtaaa 5961933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 305 - 390
Target Start/End: Complemental strand, 24253968 - 24253883
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 390  Q
    ||||||||||||||||| |||||||||| |||||||||||||| |||  | |||||| |||||||||||||| ||| | |||||||    
T  24253968 ttagggtgtgtttggatggagggtttagaaggggaagggagggaaggatttacttttcttttttaaattacggacattataaaatg 24253883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 305 - 400
Target Start/End: Complemental strand, 220643 - 220548
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 400  Q
    ||||||| ||||||||| |||||||||||||| |||||||||||||   | |||||| |||||||||||||| || |||||| |||| ||| ||||    
T  220643 ttagggtctgtttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacggactatgtaacatgtttttctaaa 220548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 302 - 375
Target Start/End: Complemental strand, 24560466 - 24560393
Alignment:
Q  302 ctcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    |||||||||||||||||||| |||||||||||||||||| ||| ||||| | | ||||||  ||||||||||||    
T  24560466 ctcttagggtgtgtttggatggagggtttaggaggggaacggatgggagagtttacttttcatttttaaattac 24560393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 372 - 475
Target Start/End: Original strand, 36727242 - 36727349
Alignment:
Q  372 ttacgaacaatgtaaaatgt-ctttttaaat---taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattt 467  Q
    |||| ||||||||||||||| ||||| ||||   |||||||||||||||||||| ||||| ||| |||||| |||||| | |||||| | ||||| ||||    
T  36727242 ttactaacaatgtaaaatgttcttttaaaataaataagtgtttttgaagtattatatgataatttatcatgttgttaagttaattttcttaaaattattt 36727341  T
Q  468 tataatgt 475  Q
    ||||||||    
T  36727342 tataatgt 36727349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 311 - 376
Target Start/End: Complemental strand, 55428619 - 55428554
Alignment:
Q  311 tgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||||||||||||||||||||||||||| |  | |||||| || |||||||||||    
T  55428619 tgtgtttggattgagggtttaggaggggaagggaggggatgatttacttttcttctttaaattacg 55428554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 309 - 389
Target Start/End: Complemental strand, 26136039 - 26135959
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 389  Q
    |||||| ||| || ||||||||||||||||||||||| |||||| | |||||| |||||||||||||| ||| | ||||||    
T  26136039 ggtgtgattgaatggagggtttaggaggggaagggagtggagggtttacttttcttttttaaattacggacattataaaat 26135959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 301 - 536
Target Start/End: Complemental strand, 30200345 - 30200098
Alignment:
Q  301 actcttagggtgtgtttggattgaggg----tttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt- 395  Q
    ||||| |||||||||||||||||||||    | |||||||||||||||||| |||| | |||||| |||||||||||||| || || ||| |||| |||     
T  30200345 actctaagggtgtgtttggattgagggagggtataggaggggaagggagggaagggtttacttttcttttttaaattacggactatataacatgtttttc 30200246  T
Q  396 ----ttaaattaagtgtttttgaagtattacatgatcattgatcatgctgttaat---tcaattttttaaaaatcattttataatgtctttaaattaaaa 488  Q
         ||||| ||||||  || ||||| || |||||| ||| | ||  |||||||   | || |||||||||| ||||| ||| ||||  ||| ||||||    
T  30200245 taaaataaatcaagtgtgattaaagtactatatgatcgttgtttattatgttaatatgtaaactttttaaaaaacatttcatagtgtccgtaatttaaaa 30200146  T
Q  489 aaggaatgtaagccctcccctcctaaaccctcttcccaaacacaccct 536  Q
    | | ||  ||| ||||||||||||||||||||   |||||||||||||    
T  30200145 atgaaaactaaaccctcccctcctaaaccctccatccaaacacaccct 30200098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 27541937 - 27541998
Alignment:
Q  313 tgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaatta 374  Q
    |||||||||||||||||||||||||||||||||| || || |||| |||  |||||||||||    
T  27541937 tgtttggattgagggtttaggaggggaagggaggagatggttcacatttcatttttaaatta 27541998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 305 - 342
Target Start/End: Complemental strand, 37102385 - 37102348
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagg 342  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37102385 ttagggtgtgtttggattgagggtttaggaggggaagg 37102348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 376
Target Start/End: Complemental strand, 41110565 - 41110496
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||||||||||||  ||||||||||||| ||| || | ||||||  |||||||||||||    
T  41110565 agggtgtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattacg 41110496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 344
Target Start/End: Complemental strand, 54574604 - 54574563
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggaggggaaggga 344  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  54574604 tcttagggtgtgtttggattgagggtttaggaagggaaggga 54574563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 313 - 543
Target Start/End: Complemental strand, 54985943 - 54985696
Alignment:
Q  313 tgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtg 407  Q
    |||||||||||||||||||| |||||||| || | |||   ||  ||| |||||||||||||| |  ||||||||||||  |||     |||||||||||    
T  54985943 tgtttggattgagggtttagaaggggaagagatgagagaattcgttttaattttttaaattacaactaatgtaaaatgttctttcaaaataaattaagtg 54985844  T
Q  408 ttttt-----gaagtattacatgatcattg-------atcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaat 495  Q
    |||||     ||||||||| |||||||||        |||||  ||||||||||||||| ||||||||| |||||||||||  ||| ||||||| | ||     
T  54985843 ttttttttttgaagtattatatgatcattattcatttatcatattgttaattcaattttctaaaaatcaatttataatgtccgtaatttaaaaacgaaaa 54985744  T
Q  496 gtaagccctcccctcctaaaccctcttcccaaacacacccttaataaa 543  Q
     ||||| ||| ||| ||||||||||   |||||||||| |||| ||||    
T  54985743 ctaagctctctccttctaaaccctcaatccaaacacactcttagtaaa 54985696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 18654842 - 18654802
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggag 350  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  18654842 gtgtgtttgaattgagggtttaggaggggaagggaggggag 18654802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 21773776 - 21773851
Alignment:
Q  301 actcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||| || ||||   |||||| |||| |||||||||    
T  21773776 actctaagggtatgtttggattgaaggtttaggaggggaagggaaggaagggtatacttttcttttctaaattacg 21773851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 309 - 376
Target Start/End: Original strand, 41110323 - 41110390
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||| |||| ||||||||||||||||||| || || | ||||||  |||||||||||||    
T  41110323 ggtgtgtttggatggaggatttaggaggggaagggaggagaaggtttacttttcatttttaaattacg 41110390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 376
Target Start/End: Complemental strand, 52474165 - 52474090
Alignment:
Q  301 actcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||| ||||||||||||    ||||||||||||||||||||| |||||| | ||||||  |||||||||||||    
T  52474165 actcttaaggtgtgtttggaggatgggtttaggaggggaagggagaggagggtttactttttatttttaaattacg 52474090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 361
Target Start/End: Original strand, 5903549 - 5903603
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcactttt 361  Q
    |||||||||||||||||||| |||| |||||||||| ||||||||| | ||||||    
T  5903549 agggtgtgtttggattgaggatttaagaggggaaggcaggggagggtttactttt 5903603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 347
Target Start/End: Original strand, 9312470 - 9312516
Alignment:
Q  301 actcttagggtgtgtttggattgagggtttaggaggggaagggaggg 347  Q
    ||||||||||| |||||||||||||||||||  ||||||||||||||    
T  9312470 actcttagggtatgtttggattgagggtttaataggggaagggaggg 9312516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 350
Target Start/End: Original strand, 36568901 - 36568947
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggag 350  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||||    
T  36568901 cttagggtgtgtttggatggagggtttaggagtggaatggaggggag 36568947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 310 - 375
Target Start/End: Complemental strand, 6803442 - 6803377
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    ||||||||||||||| |||||||||||||||| |||| ||| | | | |||| |||||||||||||    
T  6803442 gtgtgtttggattgaaggtttaggaggggaagagaggagagagtttaattttcttttttaaattac 6803377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 25655216 - 25655171
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggaggg 352  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||    
T  25655216 agggtgtgtttggattgagggttgaagaggagaagggaggggaggg 25655171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 310 - 375
Target Start/End: Original strand, 28581189 - 28581254
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    |||||||||||| |||||||||| || |||||||||||||||| | | ||||  ||||||||||||    
T  28581189 gtgtgtttggatggagggtttagaagaggaagggaggggagggtttagttttcatttttaaattac 28581254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 415 - 476
Target Start/End: Original strand, 55428492 - 55428553
Alignment:
Q  415 agtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 476  Q
    ||||||| ||||||||| |||| | ||||||||||||||| |||||||||| || |||||||    
T  55428492 agtattatatgatcatttatcacgttgttaattcaattttctaaaaatcatcttgtaatgtc 55428553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 651740 - 651776
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaaggg 343  Q
    |||||||||||||||||||||||||||||||| ||||    
T  651740 agggtgtgtttggattgagggtttaggagggggaggg 651776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 307 - 367
Target Start/End: Original strand, 8432261 - 8432321
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttt 367  Q
    |||||||||||| || ||||||||| ||||||||| ||||||||| || |||||| |||||    
T  8432261 agggtgtgtttgaatggagggtttacgaggggaagagaggggaggacttactttttttttt 8432321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 9312713 - 9312673
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggg 347  Q
    |||| |||||||||||||||||||||||||||| |||||||    
T  9312713 agggagtgtttggattgagggtttaggaggggaggggaggg 9312673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 300 - 372
Target Start/End: Complemental strand, 25499146 - 25499074
Alignment:
Q  300 cactcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaat 372  Q
    ||||||||||| |||||||||| ||| ||||| |||||| || ||||| |||| | |||||| ||||||||||    
T  25499146 cactcttagggggtgtttggatggagagtttaagagggggagagagggaagggtttacttttcttttttaaat 25499074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 328 - 380
Target Start/End: Original strand, 25654991 - 25655043
Alignment:
Q  328 tttaggaggggaagggaggggagggctcacttttattttttaaattacgaaca 380  Q
    ||||||||||||||||||||||||| | ||||||  |||||| ||||||||||    
T  25654991 tttaggaggggaagggaggggagggtttacttttcatttttatattacgaaca 25655043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 30200094 - 30200130
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggagggga 339  Q
    ||||||||||||||||||| |||||||||||||||||    
T  30200094 tcttagggtgtgtttggatggagggtttaggagggga 30200130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 347
Target Start/End: Original strand, 31664391 - 31664427
Alignment:
Q  311 tgtgtttggattgagggtttaggaggggaagggaggg 347  Q
    ||||||||||||||||||||| |||||||||||||||    
T  31664391 tgtgtttggattgagggtttaagaggggaagggaggg 31664427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 347
Target Start/End: Complemental strand, 31932005 - 31931969
Alignment:
Q  311 tgtgtttggattgagggtttaggaggggaagggaggg 347  Q
    ||||||||||||||||||||| |||||||||||||||    
T  31932005 tgtgtttggattgagggtttaagaggggaagggaggg 31931969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 452 - 540
Target Start/End: Complemental strand, 37102243 - 37102155
Alignment:
Q  452 tttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttcccaaacacacccttaat 540  Q
    |||||||||| ||||| ||| ||||  ||| ||||||| | ||  ||| ||||||||||||||||||||   |||||||||||||||||    
T  37102243 tttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaaccctcccctcctaaaccctccatccaaacacacccttaat 37102155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 42772275 - 42772231
Alignment:
Q  298 aacactcttagggtgtgtttggattgagggtttaggaggggaagg 342  Q
    |||| |||||||||||||||| || ||||||||||||||||||||    
T  42772275 aacattcttagggtgtgtttgaatggagggtttaggaggggaagg 42772231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 312 - 375
Target Start/End: Original strand, 14897981 - 14898044
Alignment:
Q  312 gtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    |||||||||||||| ||||||||||||||||||| |||    | |||||| |||||||||||||    
T  14897981 gtgtttggattgagagtttaggaggggaagggagaggaaattttacttttcttttttaaattac 14898044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 352
Target Start/End: Original strand, 18654598 - 18654645
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggaggg 352  Q
    ||||||||||||||||| ||||||||||||||| ||| || |||||||    
T  18654598 ttagggtgtgtttggatggagggtttaggagggaaagagatgggaggg 18654645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 376
Target Start/End: Complemental strand, 23028168 - 23028101
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||| |||||||| |||||||||  ||||| ||| || ||||||  |||||||||||||    
T  23028168 ggtgtgtttggatggagggtttgggaggggaaaagagggcaggacttactttttatttttaaattacg 23028101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 431
Target Start/End: Original strand, 46204884 - 46205015
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt-----ttaa 399  Q
    ||||| ||||||||||| |||||||||| ||| |||| || | ||| | | |||||| |||||||||||| |||| || ||| |||| |||      |||    
T  46204884 ttaggatgtgtttggatcgagggtttagcaggagaagagatgagagtgtttacttttcttttttaaattatgaactatataacatgtttttctaaaataa 46204983  T
Q  400 attaagtgtttttgaagtattacatgatcatt 431  Q
    |||||||||  ||||||||||| |||||||||    
T  46204984 attaagtgtgattgaagtattatatgatcatt 46205015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 311 - 345
Target Start/End: Original strand, 10748299 - 10748333
Alignment:
Q  311 tgtgtttggattgagggtttaggaggggaagggag 345  Q
    ||||||||||| |||||||||||||||||||||||    
T  10748299 tgtgtttggatggagggtttaggaggggaagggag 10748333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 48683850 - 48683816
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggagggga 339  Q
    ||||||||||||||||| |||||||||||||||||    
T  48683850 ttagggtgtgtttggatagagggtttaggagggga 48683816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 346
Target Start/End: Complemental strand, 16275941 - 16275900
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggagg 346  Q
    |||||||||||||||||||||||||| | |||||| ||||||    
T  16275941 ttagggtgtgtttggattgagggtttggaaggggaggggagg 16275900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 339
Target Start/End: Complemental strand, 2387994 - 2387962
Alignment:
Q  307 agggtgtgtttggattgagggtttaggagggga 339  Q
    |||||||||||||||||||||||| ||||||||    
T  2387994 agggtgtgtttggattgagggtttgggagggga 2387962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 311 - 351
Target Start/End: Original strand, 12790377 - 12790417
Alignment:
Q  311 tgtgtttggattgagggtttaggaggggaagggaggggagg 351  Q
    ||||||||||||||||||||||||| ||||| ||| |||||    
T  12790377 tgtgtttggattgagggtttaggagaggaagagagaggagg 12790417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 345
Target Start/End: Original strand, 14897897 - 14897933
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggag 345  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  14897897 ggtgtttttggattgagagtttaggaggggaagggag 14897933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 375
Target Start/End: Original strand, 16883974 - 16884041
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    ||||||||||||||  ||||||||||  |||||||| ||||||||||| || ||| |||||||| ||||    
T  16883974 agggtgtgtttggaaagagggtttagt-ggggaaggaaggggagggcttacatttcttttttaatttac 16884041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 301 - 345
Target Start/End: Original strand, 27197677 - 27197721
Alignment:
Q  301 actcttagggtgtgtttggattgagggtttaggaggggaagggag 345  Q
    ||||||||| ||||||||||| ||||||||| ||||| |||||||    
T  27197677 actcttaggatgtgtttggatagagggtttaagagggaaagggag 27197721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 37102159 - 37102191
Alignment:
Q  307 agggtgtgtttggattgagggtttaggagggga 339  Q
    ||||||||||||||| |||||||||||||||||    
T  37102159 agggtgtgtttggatggagggtttaggagggga 37102191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 41039948 - 41039984
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaag 341  Q
    ||||||||||||||||| || ||||||||||||||||    
T  41039948 ttagggtgtgtttggatggaaggtttaggaggggaag 41039984  T

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Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 42699850 - 42699814
Alignment:
Q  303 tcttagggtgtgtttggattgagggtttaggagggga 339  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  42699850 tcttagggtgtttttggatcgagggtttaggagggga 42699814  T

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Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 312 - 376
Target Start/End: Original strand, 52473920 - 52473984
Alignment:
Q  312 gtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacg 376  Q
    |||||||||||||| |||| ||||||||||  | ||||| | ||| |||| ||||||||||||||    
T  52473920 gtgtttggattgagagtttgggaggggaagaaatgggagagttcaattttcttttttaaattacg 52473984  T

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Target: scaffold0026 (Bit Score: 101; Significance: 1e-49; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 307 - 476
Target Start/End: Complemental strand, 1642 - 1467
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt------ttaaa 400  Q
    |||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       ||||    
T  1642 agggtgtgtttgaattgagggtttaggagaggaatggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttctttaaataaa 1543  T
Q  401 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 476  Q
    |||||| ||||| |||||||| ||||||||| |||| | ||||||||||||||| ||||||||||| |||||||||    
T  1542 ttaagtattttttaagtattatatgatcatttatcaagttgttaattcaattttctaaaaatcattctataatgtc 1467  T

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Target: scaffold0026; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 1175 - 1256
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgt 391  Q
    |||||||||||||||||||||||||||||||| |||||||| | | |||||| |||||||||||||| || |||||| ||||    
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacggactatgtaacatgt 1256  T

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Target: scaffold0026; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 371
Target Start/End: Original strand, 1390 - 1461
Alignment:
Q  299 acactcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaa 371  Q
    ||||||||||| | |||||||||||||||||||||| | ||| ||| | |||| || |||||| |||||||||    
T  1390 acactcttagg-tatgtttggattgagggtttaggaagagaaaggatgagaggacttacttttcttttttaaa 1461  T

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Target: scaffold0119 (Bit Score: 94; Significance: 2e-45; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 307 - 491
Target Start/End: Original strand, 37383 - 37572
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 401  Q
    |||||| ||||| ||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||     |||||    
T  37383 agggtgcgtttgaattgaggatttaggagggcaaggaaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaat 37482  T
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 491  Q
     ||||||||||||||| ||| ||||||| | |||||| |||||||| | |||| |||||||||| ||||| ||||| ||| |||||||||    
T  37483 caagtgtttttgaagtgttatatgatcacttatcatgttgttaattaagttttctaaaaatcatcttatattgtctgtaatttaaaaaag 37572  T

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Target: scaffold0119; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 307 - 429
Target Start/End: Original strand, 30715 - 30843
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------taaa 400  Q
    |||||| ||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||      ||||    
T  30715 agggtgcgtttggattgaggatttaggaggacaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttttaaataaa 30814  T
Q  401 ttaagtgtttttgaagtattacatgatca 429  Q
    ||||||||||||||||| ||| |||||||    
T  30815 ttaagtgtttttgaagtgttatatgatca 30843  T

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Target: scaffold0071 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 305 - 541
Target Start/End: Original strand, 52894 - 53122
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaat--- 401  Q
    |||||||||||||||||||||||||||||| ||||||           ||||||||||||||||||||||| ||||||||||||| | |||||||||       
T  52894 ttagggtgtgtttggattgagggtttaggatgggaaga----------ctcacttttattttttaaattacaaacaatgtaaaatatttttttaaataca 52983  T
Q  402 -taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaag 500  Q
     |||||||||||||| ||||| ||||||||| |||||| ||||| |||||||||  ||||||||||| |||||| |  ||| ||||||||| || |||      
T  52984 ttaagtgtttttgaaatattatatgatcatttatcatgttgttagttcaattttcaaaaaatcatttcataatgcccataatttaaaaaagaaaagta-- 53081  T
Q  501 ccctcccctcctaaaccctcttcccaaacacacccttaata 541  Q
    |  |  ||||||||||||||   ||||||||||||||||||    
T  53082 cattgtcctcctaaaccctccatccaaacacacccttaata 53122  T

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Target: scaffold0012 (Bit Score: 61; Significance: 8e-26; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 304 - 491
Target Start/End: Original strand, 184608 - 184796
Alignment:
Q  304 cttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt------ 397  Q
    ||||||||||||||||||||||||||||||||||||          ||| ||||||||||||||||||||| |||| || |||||||| |||||          
T  184608 cttagggtgtgtttggattgagggtttaggagggga----------gggttcacttttattttttaaattatgaactatataaaatgttttttttttttt 184697  T
Q  398 ----aaattaagtgtttt-tgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 491  Q
        |||||||||||||| |||||||||| ||||| ||  |||||| |||||||||||||||  ||||||||||||||||||||  ||| |||||||||    
T  184698 aaataaattaagtgttttttgaagtattatatgataatatatcatgttgttaattcaattttaaaaaaatcattttataatgtccataatttaaaaaag 184796  T

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Target: scaffold0012; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 374
Target Start/End: Complemental strand, 184847 - 184784
Alignment:
Q  311 tgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaatta 374  Q
    ||||||||||| ||||||||||||||| |||||| ||||||| | ||| || ||||||||||||    
T  184847 tgtgtttggatggagggtttaggagggaaagggaagggagggtttactattcttttttaaatta 184784  T

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Target: scaffold0007 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 397 - 511
Target Start/End: Original strand, 242311 - 242425
Alignment:
Q  397 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatg 496  Q
    ||||| |||| |||||||| ||||| || |||||| ||||||  ||||||||||||||||||||||||||||||||||||  ||| ||||||||| || |    
T  242311 taaatgaagtatttttgaattattatatcatcatttatcatgtcgttaattcaattttttaaaaatcattttataatgtccgtaatttaaaaaagaaaag 242410  T
Q  497 taagccctcccctcc 511  Q
    ||| |||||||||||    
T  242411 taaaccctcccctcc 242425  T

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Target: scaffold0007; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 306 - 390
Target Start/End: Complemental strand, 242461 - 242377
Alignment:
Q  306 tagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 390  Q
    |||| ||||||||||| || ||||||  ||||||||||||||||||| | |||||| |||||||||||||| ||| | |||||||    
T  242461 taggctgtgtttggatggatggtttataaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatg 242377  T

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Target: scaffold0067 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 307 - 400
Target Start/End: Complemental strand, 39434 - 39341
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 400  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| | |||||| |||||||||||||| || |||||| |||| ||| ||||    
T  39434 agggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattacggactatgtaacatgtttttctaaa 39341  T

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Target: scaffold0067; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 39184 - 39256
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaaggga-ggggagggctcacttttattttttaaattacg 376  Q
    ||||||||||||||||| ||||||||||||||||||  || |||||||| | ||||||  |||||||||||||    
T  39184 ttagggtgtgtttggatggagggtttaggaggggaaatgagggggagggtttacttttcatttttaaattacg 39256  T

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Target: scaffold1414 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold1414
Description:

Target: scaffold1414; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 362 - 473
Target Start/End: Original strand, 355 - 473
Alignment:
Q  362 attttttaaattacgaacaatgtaaaatgtctttttaa------attaagtgtttttgaagtattacatgatcattgatcatgctgttaa-ttcaatttt 454  Q
    |||||||| ||||||||||| ||||||||| ||||| |      |||||||||||||||||||||  || |||||| ||||||||||||| || ||||||    
T  355 attttttatattacgaacaacgtaaaatgttttttttataaataattaagtgtttttgaagtattttattatcatttatcatgctgttaattttaatttt 454  T
Q  455 ttaaaaatcattttataat 473  Q
     ||||||||||||||||||    
T  455 ctaaaaatcattttataat 473  T

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Target: scaffold0096 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 305 - 375
Target Start/End: Original strand, 6582 - 6652
Alignment:
Q  305 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    |||||||||||||||||||| | ||||||||| ||||||||||||||| | |||||| |||||||||||||    
T  6582 ttagggtgtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaattac 6652  T

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Target: scaffold0198 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 310 - 375
Target Start/End: Original strand, 3150 - 3215
Alignment:
Q  310 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    |||||||||||||||| |||||||||||||||||||||||| | | |||||| |||||||||||||    
T  3150 gtgtgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaattac 3215  T

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Target: scaffold0240 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 402 - 491
Target Start/End: Original strand, 17640 - 17729
Alignment:
Q  402 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 491  Q
    ||||||| |||||||||||| ||||| ||| |||||| || ||||||||||||  ||||||||||||||||| | | ||| |||||||||    
T  17640 taagtgtatttgaagtattatatgattatttatcatgttgctaattcaattttcaaaaaatcattttataatatttgtaatttaaaaaag 17729  T

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Target: scaffold0240; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 301 - 375
Target Start/End: Complemental strand, 17788 - 17716
Alignment:
Q  301 actcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattac 375  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||  ||| | |||||| |||||||||||||    
T  17788 actctaagggtgtgtttggatggagggtttaggagtggaagggaggg--gggtttacttttcttttttaaattac 17716  T

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Target: scaffold0262 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 380
Target Start/End: Original strand, 16296 - 16369
Alignment:
Q  307 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaaca 380  Q
    ||||| ||||||||| ||||||||||||||| || ||||||||||| | ||||||  ||||||||||| |||||    
T  16296 agggtttgtttggatggagggtttaggagggaaaaggaggggagggtttacttttcatttttaaattatgaaca 16369  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 391
Target Start/End: Original strand, 121987 - 122068
Alignment:
Q  309 ggtgtgtttggattgagggtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgt 391  Q
    |||||||||||||||||||||||||||  | || |||||||||  |  ||||| ||||| |||||||||||| | ||||||||    
T  121987 ggtgtgtttggattgagggtttaggagaag-agagaggggaggatttgcttttctttttaaaattacgaacattataaaatgt 122068  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 411 - 459
Target Start/End: Complemental strand, 81546 - 81498
Alignment:
Q  411 ttgaagtattacatgatcattgatcatgctgttaattcaattttttaaa 459  Q
    ||||||||||| ||||||||| |||||| | ||| ||||||||||||||    
T  81546 ttgaagtattatatgatcatttatcatgttattatttcaattttttaaa 81498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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