View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4426_high_58 (Length: 215)

Name: NF4426_high_58
Description: NF4426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4426_high_58
NF4426_high_58
[»] chr3 (47 HSPs)
chr3 (97-198)||(36868411-36868512)
chr3 (9-77)||(36868558-36868626)
chr3 (106-174)||(50960844-50960912)
chr3 (106-173)||(49503766-49503833)
chr3 (106-174)||(39600892-39600960)
chr3 (106-174)||(54128381-54128449)
chr3 (106-198)||(21200553-21200643)
chr3 (9-65)||(27917490-27917546)
chr3 (13-69)||(29919226-29919282)
chr3 (13-69)||(29928586-29928642)
chr3 (13-69)||(29968379-29968435)
chr3 (13-69)||(29977740-29977796)
chr3 (9-69)||(49841529-49841589)
chr3 (106-174)||(52138803-52138871)
chr3 (119-174)||(39235154-39235209)
chr3 (106-180)||(26490318-26490392)
chr3 (105-162)||(29817506-29817563)
chr3 (13-66)||(40562520-40562573)
chr3 (106-171)||(41842725-41842790)
chr3 (13-65)||(26490239-26490291)
chr3 (9-69)||(36820263-36820323)
chr3 (106-174)||(38430851-38430919)
chr3 (107-174)||(42510227-42510292)
chr3 (106-174)||(43694976-43695044)
chr3 (13-69)||(45236778-45236834)
chr3 (9-69)||(45728064-45728124)
chr3 (9-57)||(46568034-46568082)
chr3 (106-173)||(5168835-5168902)
chr3 (106-173)||(36820173-36820240)
chr3 (12-47)||(44395346-44395381)
chr3 (118-169)||(45289307-45289358)
chr3 (106-173)||(47233808-47233875)
chr3 (19-69)||(345015-345065)
chr3 (110-172)||(3987054-3987116)
chr3 (13-67)||(19736918-19736972)
chr3 (108-174)||(19737002-19737068)
chr3 (108-174)||(19757905-19757971)
chr3 (125-171)||(48734349-48734395)
chr3 (106-172)||(49841622-49841688)
chr3 (106-168)||(54365194-54365255)
chr3 (106-171)||(51447924-51447989)
chr3 (106-154)||(34719303-34719351)
chr3 (106-174)||(38060434-38060502)
chr3 (9-69)||(42510315-42510375)
chr3 (21-69)||(48777519-48777567)
chr3 (9-65)||(51448017-51448073)
chr3 (9-65)||(52138718-52138774)
[»] chr4 (59 HSPs)
chr4 (107-174)||(29398822-29398889)
chr4 (106-171)||(31459033-31459098)
chr4 (113-182)||(42285903-42285972)
chr4 (108-181)||(46715576-46715649)
chr4 (106-182)||(35555850-35555926)
chr4 (106-182)||(51252664-51252740)
chr4 (110-172)||(50662394-50662457)
chr4 (106-172)||(28236186-28236252)
chr4 (106-172)||(54470210-54470276)
chr4 (109-182)||(42639223-42639296)
chr4 (13-69)||(20105775-20105831)
chr4 (118-174)||(47611742-47611798)
chr4 (9-69)||(49987346-49987406)
chr4 (106-173)||(31960026-31960093)
chr4 (106-173)||(43433927-43433994)
chr4 (106-173)||(52569727-52569794)
chr4 (106-173)||(53707797-53707864)
chr4 (106-172)||(31339540-31339605)
chr4 (108-182)||(38570950-38571024)
chr4 (119-172)||(30853373-30853426)
chr4 (106-174)||(436232-436300)
chr4 (9-69)||(31403324-31403384)
chr4 (110-182)||(33709931-33710003)
chr4 (106-154)||(38266149-38266197)
chr4 (106-174)||(41192839-41192907)
chr4 (9-69)||(44860772-44860832)
chr4 (119-171)||(44860862-44860914)
chr4 (13-65)||(45205156-45205208)
chr4 (110-162)||(49987435-49987487)
chr4 (118-174)||(50471541-50471597)
chr4 (9-65)||(56375208-56375264)
chr4 (106-173)||(33227212-33227279)
chr4 (14-69)||(45423542-45423597)
chr4 (106-173)||(48622755-48622822)
chr4 (12-71)||(54470128-54470187)
chr4 (106-172)||(1793463-1793529)
chr4 (15-69)||(2588905-2588959)
chr4 (9-67)||(7092525-7092583)
chr4 (106-172)||(20591513-20591579)
chr4 (11-69)||(25755237-25755295)
chr4 (106-172)||(28497493-28497558)
chr4 (108-173)||(4440858-4440923)
chr4 (9-58)||(18499791-18499840)
chr4 (106-171)||(30621418-30621483)
chr4 (106-171)||(37797855-37797920)
chr4 (14-47)||(40933222-40933255)
chr4 (14-62)||(4137009-4137057)
chr4 (106-174)||(10209037-10209105)
chr4 (9-65)||(12494668-12494724)
chr4 (141-181)||(13805469-13805509)
chr4 (9-69)||(17900398-17900458)
chr4 (9-65)||(23906609-23906665)
chr4 (106-174)||(31403229-31403295)
chr4 (9-65)||(31960122-31960178)
chr4 (13-65)||(35690226-35690278)
chr4 (106-162)||(42293472-42293528)
chr4 (9-65)||(43433836-43433892)
chr4 (13-69)||(45094466-45094522)
chr4 (9-65)||(48174401-48174457)
[»] scaffold0018 (2 HSPs)
scaffold0018 (106-175)||(44078-44147)
scaffold0018 (106-173)||(31471-31538)
[»] chr1 (45 HSPs)
chr1 (106-174)||(5338727-5338795)
chr1 (106-174)||(27848016-27848084)
chr1 (106-172)||(48431619-48431685)
chr1 (13-69)||(4379927-4379983)
chr1 (9-65)||(9599702-9599758)
chr1 (106-174)||(35828761-35828829)
chr1 (9-69)||(52442808-52442868)
chr1 (106-173)||(34792561-34792628)
chr1 (110-172)||(43423726-43423788)
chr1 (106-167)||(14226047-14226108)
chr1 (106-171)||(40416374-40416439)
chr1 (106-174)||(1661433-1661501)
chr1 (106-174)||(2544602-2544670)
chr1 (106-182)||(3819059-3819135)
chr1 (9-69)||(9509236-9509296)
chr1 (13-69)||(34827406-34827462)
chr1 (106-173)||(1210748-1210815)
chr1 (118-181)||(8343062-8343125)
chr1 (106-173)||(9509321-9509388)
chr1 (9-72)||(26016355-26016418)
chr1 (106-169)||(38868885-38868948)
chr1 (106-173)||(51602059-51602126)
chr1 (108-174)||(13827928-13827994)
chr1 (106-171)||(8671921-8671986)
chr1 (9-69)||(1661344-1661404)
chr1 (110-174)||(32404737-32404801)
chr1 (106-173)||(15085937-15086004)
chr1 (106-173)||(22090099-22090166)
chr1 (106-181)||(23791848-23791923)
chr1 (106-173)||(39140523-39140590)
chr1 (110-173)||(51440977-51441040)
chr1 (124-174)||(10569278-10569328)
chr1 (106-172)||(32231167-32231233)
chr1 (106-171)||(4380016-4380081)
chr1 (16-69)||(16822323-16822376)
chr1 (105-174)||(36340014-36340083)
chr1 (9-65)||(1210663-1210719)
chr1 (9-65)||(9592652-9592708)
chr1 (118-174)||(16822233-16822289)
chr1 (124-168)||(17815493-17815537)
chr1 (106-174)||(19908250-19908318)
chr1 (9-65)||(30202438-30202494)
chr1 (9-69)||(40419557-40419617)
chr1 (113-169)||(51812535-51812591)
chr1 (13-69)||(52633476-52633532)
[»] chr7 (67 HSPs)
chr7 (106-173)||(12966025-12966092)
chr7 (109-169)||(7189442-7189502)
chr7 (9-69)||(30200263-30200323)
chr7 (106-170)||(42187473-42187537)
chr7 (106-168)||(38920797-38920859)
chr7 (106-172)||(40169652-40169718)
chr7 (119-181)||(41948532-41948594)
chr7 (106-172)||(47848677-47848743)
chr7 (106-171)||(27021906-27021971)
chr7 (106-171)||(28020967-28021032)
chr7 (106-174)||(19262644-19262712)
chr7 (106-174)||(36101976-36102044)
chr7 (106-182)||(36514410-36514486)
chr7 (9-52)||(5335840-5335883)
chr7 (106-173)||(12841487-12841554)
chr7 (106-173)||(13859220-13859287)
chr7 (106-173)||(34869423-34869490)
chr7 (106-173)||(35906413-35906480)
chr7 (106-173)||(49029279-49029346)
chr7 (10-68)||(40139221-40139279)
chr7 (13-67)||(47848596-47848650)
chr7 (106-171)||(2885936-2886001)
chr7 (124-173)||(24549905-24549954)
chr7 (127-172)||(35713719-35713764)
chr7 (16-69)||(48736203-48736256)
chr7 (128-172)||(6420703-6420747)
chr7 (110-174)||(7273046-7273110)
chr7 (9-53)||(14593679-14593723)
chr7 (9-53)||(16013202-16013246)
chr7 (9-69)||(24549991-24550051)
chr7 (106-174)||(28628144-28628212)
chr7 (110-174)||(30200174-30200238)
chr7 (9-65)||(37617862-37617918)
chr7 (13-69)||(42187393-42187448)
chr7 (106-173)||(6374871-6374938)
chr7 (109-172)||(7220750-7220813)
chr7 (106-173)||(11593963-11594030)
chr7 (106-173)||(22349623-22349690)
chr7 (106-173)||(31005226-31005293)
chr7 (106-173)||(33072955-33073022)
chr7 (9-68)||(36514510-36514569)
chr7 (106-173)||(39906582-39906649)
chr7 (106-173)||(43281677-43281744)
chr7 (106-173)||(45836692-45836759)
chr7 (106-172)||(18605359-18605425)
chr7 (106-172)||(18637565-18637631)
chr7 (106-172)||(18650999-18651065)
chr7 (106-172)||(25579290-25579356)
chr7 (9-71)||(31005141-31005203)
chr7 (9-47)||(36869615-36869653)
chr7 (106-172)||(43282411-43282477)
chr7 (111-173)||(44855384-44855446)
chr7 (106-172)||(46356069-46356135)
chr7 (124-173)||(38135424-38135473)
chr7 (16-69)||(39811882-39811935)
chr7 (106-182)||(5335923-5335999)
chr7 (9-65)||(11593878-11593934)
chr7 (9-65)||(12841583-12841639)
chr7 (110-182)||(14593772-14593844)
chr7 (106-154)||(26742127-26742175)
chr7 (9-65)||(33072872-33072928)
chr7 (109-173)||(33350018-33350082)
chr7 (9-65)||(35906509-35906565)
chr7 (106-174)||(36136767-36136835)
chr7 (106-173)||(37617947-37618015)
chr7 (106-174)||(40830226-40830294)
chr7 (106-174)||(46989906-46989974)
[»] chr5 (37 HSPs)
chr5 (106-181)||(33667219-33667294)
chr5 (14-69)||(21952274-21952329)
chr5 (106-173)||(31636132-31636199)
chr5 (106-176)||(28676598-28676668)
chr5 (106-172)||(43558040-43558106)
chr5 (106-174)||(43475243-43475311)
chr5 (106-173)||(4496387-4496454)
chr5 (106-174)||(41833793-41833863)
chr5 (106-172)||(1287792-1287858)
chr5 (118-172)||(42199301-42199355)
chr5 (106-171)||(1275267-1275332)
chr5 (32-69)||(8492627-8492664)
chr5 (106-171)||(15489706-15489771)
chr5 (106-174)||(18351118-18351187)
chr5 (106-182)||(2712947-2713023)
chr5 (106-174)||(34273030-34273098)
chr5 (106-173)||(14665717-14665784)
chr5 (106-173)||(16347590-16347657)
chr5 (106-173)||(24178513-24178580)
chr5 (106-173)||(28977071-28977138)
chr5 (106-173)||(38684970-38685037)
chr5 (106-156)||(14667766-14667816)
chr5 (124-181)||(6889014-6889071)
chr5 (105-182)||(14749309-14749386)
chr5 (16-69)||(16134483-16134536)
chr5 (11-52)||(27998343-27998384)
chr5 (106-154)||(27896-27944)
chr5 (106-174)||(79516-79584)
chr5 (9-65)||(1287897-1287953)
chr5 (9-65)||(2075782-2075838)
chr5 (106-182)||(6859384-6859460)
chr5 (29-69)||(6888931-6888971)
chr5 (9-69)||(11002725-11002785)
chr5 (113-173)||(12492596-12492656)
chr5 (13-69)||(16347682-16347738)
chr5 (115-167)||(21193858-21193910)
chr5 (124-172)||(38578734-38578782)
[»] chr2 (34 HSPs)
chr2 (106-180)||(8180783-8180857)
chr2 (114-172)||(13240958-13241016)
chr2 (9-69)||(7825276-7825336)
chr2 (17-69)||(9556672-9556724)
chr2 (9-69)||(9647909-9647969)
chr2 (106-174)||(12141547-12141615)
chr2 (106-162)||(19024183-19024239)
chr2 (106-173)||(43238305-43238372)
chr2 (106-180)||(25834684-25834758)
chr2 (106-155)||(18958910-18958959)
chr2 (133-182)||(42543265-42543314)
chr2 (9-65)||(8180698-8180754)
chr2 (13-69)||(12734623-12734679)
chr2 (18-69)||(37393470-37393522)
chr2 (9-69)||(42092437-42092497)
chr2 (106-174)||(43752158-43752226)
chr2 (13-69)||(45077670-45077726)
chr2 (106-173)||(11992320-11992387)
chr2 (106-173)||(36183454-36183521)
chr2 (106-172)||(38434954-38435021)
chr2 (106-173)||(38452897-38452964)
chr2 (106-173)||(45367837-45367904)
chr2 (106-172)||(2610591-2610657)
chr2 (124-174)||(3481162-3481212)
chr2 (111-172)||(14197375-14197437)
chr2 (127-172)||(9556582-9556627)
chr2 (106-159)||(11412724-11412777)
chr2 (126-174)||(12026216-12026264)
chr2 (21-69)||(21834483-21834531)
chr2 (9-69)||(23714562-23714622)
chr2 (9-69)||(24102234-24102294)
chr2 (9-69)||(32754620-32754680)
chr2 (9-65)||(36183369-36183425)
chr2 (110-174)||(41763253-41763317)
[»] chr8 (36 HSPs)
chr8 (106-170)||(9695634-9695698)
chr8 (106-182)||(29700279-29700355)
chr8 (118-172)||(35643814-35643868)
chr8 (108-169)||(13171865-13171926)
chr8 (106-171)||(45512709-45512774)
chr8 (106-173)||(12491350-12491417)
chr8 (14-69)||(28300416-28300471)
chr8 (9-68)||(36143287-36143346)
chr8 (106-172)||(18474173-18474239)
chr8 (18-68)||(36069570-36069620)
chr8 (118-172)||(41971991-41972045)
chr8 (141-174)||(79081-79114)
chr8 (105-181)||(12611537-12611613)
chr8 (118-170)||(16917199-16917251)
chr8 (9-49)||(30456535-30456575)
chr8 (118-174)||(30748472-30748528)
chr8 (9-65)||(36545065-36545121)
chr8 (9-69)||(39760728-39760788)
chr8 (106-162)||(41444549-41444605)
chr8 (106-174)||(45419240-45419308)
chr8 (106-173)||(2776441-2776508)
chr8 (14-69)||(29520583-29520638)
chr8 (110-173)||(36545156-36545219)
chr8 (106-169)||(36565457-36565520)
chr8 (15-69)||(6510730-6510784)
chr8 (16-69)||(16252860-16252913)
chr8 (106-174)||(36395160-36395229)
chr8 (106-171)||(40813327-40813392)
chr8 (106-174)||(43904876-43904947)
chr8 (14-63)||(44681386-44681435)
chr8 (118-174)||(17491832-17491888)
chr8 (9-69)||(33511278-33511338)
chr8 (106-174)||(36143368-36143436)
chr8 (9-65)||(36395258-36395314)
chr8 (106-174)||(39946860-39946928)
chr8 (106-174)||(44681250-44681318)
[»] chr6 (21 HSPs)
chr6 (106-174)||(33084061-33084129)
chr6 (106-174)||(14389379-14389446)
chr6 (9-64)||(6293678-6293733)
chr6 (118-172)||(9593919-9593973)
chr6 (126-162)||(33997765-33997801)
chr6 (9-69)||(33998308-33998368)
chr6 (106-173)||(5258360-5258427)
chr6 (14-65)||(5631741-5631792)
chr6 (111-174)||(24665818-24665881)
chr6 (106-173)||(28085379-28085446)
chr6 (9-52)||(32755837-32755880)
chr6 (12-46)||(5129164-5129198)
chr6 (106-171)||(2079343-2079408)
chr6 (118-167)||(4948529-4948578)
chr6 (118-167)||(4955500-4955549)
chr6 (9-69)||(7513690-7513750)
chr6 (106-162)||(8364575-8364631)
chr6 (13-65)||(9594020-9594072)
chr6 (13-69)||(10100161-10100217)
chr6 (9-69)||(12134205-12134265)
chr6 (13-45)||(26291700-26291732)
[»] scaffold0325 (1 HSPs)
scaffold0325 (107-171)||(11802-11866)
[»] scaffold0570 (1 HSPs)
scaffold0570 (106-173)||(1160-1227)
[»] scaffold0157 (1 HSPs)
scaffold0157 (9-65)||(25753-25809)


Alignment Details
Target: chr3 (Bit Score: 90; Significance: 1e-43; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 97 - 198
Target Start/End: Complemental strand, 36868512 - 36868411
Alignment:
Q  97 ttggggtatgtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggattcagccgtaaggatag 196  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  36868512 ttggggtatgtagcacctatggtagagaagatggtggaaagtaggcttaggtggtttgggcatatataaagaagacctttggattcagccgtaaggatag 36868413  T
Q  197 ta 198  Q
    ||    
T  36868412 ta 36868411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 36868626 - 36868558
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaataatatcat 77  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  36868626 agcagagatgaggatgttgtgttgaatttgtggtaagaccaggcgagatatgattagaaataatatcat 36868558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 50960912 - 50960844
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||||| |||||||| |||| || |||||||||||||||||||||| |||||||||||    
T  50960912 gtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacct 50960844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 49503833 - 49503766
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| |||||||| |||| || |||||||||||||||||||||| ||||||||||    
T  49503833 gtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacc 49503766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 39600960 - 39600892
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    |||| |||||| ||||| |||||||||||||  ||||||||||||||| |||||||| |||||||||||    
T  39600960 gtagtacctatagtagaaaagatggtggaaaacaagcttaggtggttttggcatgtaaagagaagacct 39600892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 54128381 - 54128449
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||||| |||||||| |||| || |||||||||||||||||||||| ||| |||||||    
T  54128381 gtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagaaaagacct 54128449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 198
Target Start/End: Original strand, 21200553 - 21200643
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggattcagccgtaaggatagta 198  Q
    ||||||||||  ||||| ||||||||||||| ||  ||||||||||||||||||||| ||||||||| | | ||||| || ||||||| ||||    
T  21200553 gtagcaccta--gtagaaaagatggtggaaactagacttaggtggtttgggcatgtagagagaagacatgtagattctgcagtaaggagagta 21200643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 27917490 - 27917546
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    |||||||||||||||||||||||| ||| |||||||| | ||||||||| |||||||    
T  27917490 agcagagatgaggatgttgtgttggatgagtggtaagcctagacgagatttgattag 27917546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 29919226 - 29919282
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||| |||||||||||| |||||||||| ||  |||||||||||||||||||||    
T  29919226 gagatgacgatgttgtgttggatgtgtggtacgattagacgagatatgattagaaat 29919282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 29928642 - 29928586
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||| |||||||||||| |||||||||| ||  |||||||||||||||||||||    
T  29928642 gagatgacgatgttgtgttggatgtgtggtacgattagacgagatatgattagaaat 29928586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 29968379 - 29968435
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||| |||||||||||| |||||||||| ||  |||||||||||||||||||||    
T  29968379 gagatgacgatgttgtgttggatgtgtggtacgattagacgagatatgattagaaat 29968435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 29977796 - 29977740
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||| |||||||||||| |||||||||| ||  |||||||||||||||||||||    
T  29977796 gagatgacgatgttgtgttggatgtgtggtacgattagacgagatatgattagaaat 29977740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 49841529 - 49841589
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||| ||||||||||||||||||| |||||| ||||||| ||||||| || ||||||||||    
T  49841529 agcatagatgaggatgttgtgttggatgtgtagtaagactagacgaggtaagattagaaat 49841589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 52138803 - 52138871
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| |||||||||||    
T  52138803 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacct 52138871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 39235154 - 39235209
Alignment:
Q  119 tagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    |||| |||||||| |||| || |||||||||||||||||||||| |||||||||||    
T  39235154 tagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacct 39235209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 26490318 - 26490392
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggat 180  Q
    ||||||||||| ||||| |||||||| |||| || ||||||||||||||| |||||| | | |||||| ||||||    
T  26490318 gtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttggacatgtagataaaagaccgttggat 26490392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 29817506 - 29817563
Alignment:
Q  105 tgtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgta 162  Q
    |||||||||||| ||||| ||||| || ||||||||| ||||||||||||| ||||||    
T  29817506 tgtagcacctatagtagaaaagattgtagaaagtaagtttaggtggtttggacatgta 29817563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 40562573 - 40562520
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattaga 66  Q
    ||||||| ||||||||||| ||||||||||||||| |||||| |||||| ||||    
T  40562573 gagatgacgatgttgtgttaaatgtgtggtaagactagacgaaatatgaataga 40562520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 41842790 - 41842725
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaaga 171  Q
    ||||||||||| ||||| |||||||||||||  |  ||||||||||||||| ||||| ||||||||    
T  41842790 gtagcacctatagtagaaaagatggtggaaaccagtcttaggtggtttgggtatgtagagagaaga 41842725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 26490239 - 26490291
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||| |||| ||| |||||||||| ||||| |||||||||||    
T  26490239 gagatgaggatgttgcgttggatgagtggtaagacaagacgggatatgattag 26490291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 36820323 - 36820263
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||| |||| ||| ||||| |||| |||||||||||||| |||||||||| ||||||||||    
T  36820323 agcaaagataaggttgttgcgttggatgtgtggtaagactagacgagataggattagaaat 36820263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 38430851 - 38430919
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||||| |||||||| |||| || |||||||| | ||||||||||| ||||| |||||    
T  38430851 gtagcacctatagtagaaaagatggtagaaaataggcttaggttgattgggcatgtagagagacgacct 38430919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 42510292 - 42510227
Alignment:
Q  107 tagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    |||||||||| ||||| ||||| ||||||| || ||||||||||||||| ||||  ||||||||||||    
T  42510292 tagcacctatagtagaaaagatagtggaaaataggcttaggtggtttggacatg--tagagaagacct 42510227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 43695044 - 43694976
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||||| ||| |||| |||| |  |||||| ||||||||||||||| |||||||||||    
T  43695044 gtagcacctatagtagaaaagttggtagaaaatttgcttagatggtttgggcatgtagagagaagacct 43694976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 45236778 - 45236834
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||| ||||||||| |||| |||||||||||||| ||||  |||||||||||||||    
T  45236778 gagattaggatgttgcgttggatgtgtggtaagactagactggatatgattagaaat 45236834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 45728064 - 45728124
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||||||||||||| | || ||| |||||||||| |||||| ||| ||||||||||    
T  45728064 agcagagatgaggatgttgcgctggatgagtggtaagacgagacgaaataggattagaaat 45728124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 46568034 - 46568082
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagat 57  Q
    |||||||||||||||||||||||| ||||||| |||||| |||| ||||    
T  46568034 agcagagatgaggatgttgtgttggatgtgtgttaagactagaccagat 46568082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 5168835 - 5168902
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||||||||| ||| |||| |||| || |||||| |||||||  |||||| ||||||||||    
T  5168835 gtagcacctatggtagaaaagttggtagaaaatacgcttagatggtttgaacatgtagagagaagacc 5168902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 36820240 - 36820173
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    |||||||||||  |||  ||||||||||||| || ||||||||||||| | |||||| ||||||||||    
T  36820240 gtagcacctatattagcaaagatggtggaaactaggcttaggtggtttagacatgtaaagagaagacc 36820173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 47
Target Start/End: Original strand, 44395346 - 44395381
Alignment:
Q  12 agagatgaggatgttgtgttgaatgtgtggtaagac 47  Q
    ||||||||||| ||||||||||||||||||||||||    
T  44395346 agagatgaggaagttgtgttgaatgtgtggtaagac 44395381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 45289358 - 45289307
Alignment:
Q  118 gtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaa 169  Q
    ||||| ||||||||||||| || |||||||||||||||||| ||| ||||||    
T  45289358 gtagaaaagatggtggaaaataggcttaggtggtttgggcacgtagagagaa 45289307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 47233875 - 47233808
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| |||||||| |||||| ||||||||||    
T  47233875 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacc 47233808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 345065 - 345015
Alignment:
Q  19 aggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||| ||||| || ||||||||||| |||||||||| ||||||||||    
T  345065 aggatgttatgttggatttgtggtaagactagacgagataggattagaaat 345015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 3987054 - 3987116
Alignment:
Q  110 cacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||||| ||||| |||||||| |||| ||  ||||||||||||||| ||||| |||||||||    
T  3987054 cacctatagtagaaaagatggtagaaactagacttaggtggtttgggaatgtagagagaagac 3987116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 19736918 - 19736972
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaa 67  Q
    ||||||| |||||||||||| ||| |||||||||| ||||| |||| ||||||||    
T  19736918 gagatgatgatgttgtgttggatgagtggtaagactagacgggatacgattagaa 19736972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 19737002 - 19737068
Alignment:
Q  108 agcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||| ||||| |||||||| |||| || | |||||||||||| ||||| | |||||||||||    
T  19737002 agcacctatagtagaaaagatggtagaaaataggtttaggtggtttgagcatgcagagagaagacct 19737068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 19757905 - 19757971
Alignment:
Q  108 agcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||| ||||| |||||||| |||| || | |||||||||||| ||||| | |||||||||||    
T  19757905 agcacctatagtagaaaagatggtagaaaataggtttaggtggtttgagcatgcagagagaagacct 19757971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 171
Target Start/End: Complemental strand, 48734395 - 48734349
Alignment:
Q  125 agatggtggaaagtaagcttaggtggtttgggcatgtatagagaaga 171  Q
    ||||||| |||| || |||||||||||||||||||||| ||||||||    
T  48734395 agatggtagaaaataggcttaggtggtttgggcatgtagagagaaga 48734349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 49841622 - 49841688
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    |||||||||||  |||| ||||||||||||| ||  || ||||||||||||| |||| |||||||||    
T  49841622 gtagcacctatattagaaaagatggtggaaactagactaaggtggtttgggcgtgtagagagaagac 49841688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 54365255 - 54365194
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagaga 168  Q
    ||||||||||| ||||| || |||| ||||| || |||||||||||||||||||||| |||||    
T  54365255 gtagcacctatagtagaaaatatggcggaaaata-gcttaggtggtttgggcatgtagagaga 54365194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 51447989 - 51447924
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaaga 171  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| | ||||||||||||| ||||||||    
T  51447989 gtagcacctatagtagaaaagttggtagaaaataggcttagatagtttgggcatgtagagagaaga 51447924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 34719351 - 34719303
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttg 154  Q
    ||||||||||| ||||| ||||||||||||||| | |||||||| ||||    
T  34719351 gtagcacctatcgtagaaaagatggtggaaagtcaacttaggtgttttg 34719303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 38060434 - 38060502
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    |||||||||||  |||| ||| |||| |||| || |||||| |||||||| |||||| |||||||||||    
T  38060434 gtagcacctataatagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacct 38060502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 42510375 - 42510315
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||||||||||||||  ||| |||||||||||||| ||| | |||| | ||||||||    
T  42510375 agcagagatgaggatgttgcattggatgtgtggtaagactagatgggataggtttagaaat 42510315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 48777567 - 48777519
Alignment:
Q  21 gatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||||||| |||||||||||||| | | |||||||||||| ||||    
T  48777567 gatgttgtgttggatgtgtggtaagactaaaagagatatgattaaaaat 48777519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 51448073 - 51448017
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||||  |||| ||||||    
T  51448073 agcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattag 51448017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 52138718 - 52138774
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||||  |||| ||||||    
T  52138718 agcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattag 52138774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 29398822 - 29398889
Alignment:
Q  107 tagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    |||||||||||||||| ||||||||||||| || ||||| |||||||||||||||| |||||||||||    
T  29398822 tagcacctatggtagaaaagatggtggaaaatatgcttatgtggtttgggcatgtagagagaagacct 29398889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 31459033 - 31459098
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaaga 171  Q
    ||||||||||| ||||| |||||||| |||| || |||||||||||||||||||||| ||||||||    
T  31459033 gtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtaaagagaaga 31459098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 42285972 - 42285903
Alignment:
Q  113 ctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggattc 182  Q
    |||| ||||| |||||||| |||| ||  ||||||||||||||||||||||||||||||||| |||||||    
T  42285972 ctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtatagagaagacctgtggattc 42285903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 46715649 - 46715576
Alignment:
Q  108 agcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggatt 181  Q
    ||||||||| ||||| ||||||||||||| || ||||||||||| |||||||||| ||||||||| | ||||||    
T  46715649 agcacctattgtagaaaagatggtggaaactaggcttaggtggtgtgggcatgtagagagaagacatgtggatt 46715576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 35555926 - 35555850
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggattc 182  Q
    ||||||||||| ||||| |||||||| |||| ||  |||||||||||||||||| || ||||||||||| |||||||    
T  35555926 gtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatttagagagaagacctgtggattc 35555850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 51252740 - 51252664
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggattc 182  Q
    ||||||||| | ||||| ||||||||||||| || ||||||||||| |||||||||| ||||||||| | |||||||    
T  51252740 gtagcacctctagtagaaaagatggtggaaactaggcttaggtggtatgggcatgtagagagaagacatgtggattc 51252664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 50662394 - 50662457
Alignment:
Q  110 cacctatggtagagaagatggtggaaagtaagcttaggtgg-tttgggcatgtatagagaagac 172  Q
    ||||||| ||||| |||||||||||||||| |||||||||| |||||||||||| |||||||||    
T  50662394 cacctatagtagaaaagatggtggaaagtaggcttaggtggttttgggcatgtagagagaagac 50662457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 28236186 - 28236252
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||||||||| ||||| ||| ||||||||| || |||||| ||||||||||||||| |||||||||    
T  28236186 gtagcacctatagtagaaaagttggtggaaaataggcttagatggtttgggcatgtagagagaagac 28236252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 54470210 - 54470276
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||||||||| ||||| ||||||||||||| ||  |||| |||||||||||||||| |||||||||    
T  54470210 gtagcacctatagtagaaaagatggtggaaactagacttaagtggtttgggcatgtagagagaagac 54470276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 182
Target Start/End: Complemental strand, 42639296 - 42639223
Alignment:
Q  109 gcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggattc 182  Q
    |||||||| ||||| |||||||||||||  | ||||||||||||||| |||||| ||||||||| | |||||||    
T  42639296 gcacctatagtagaaaagatggtggaaaccaggcttaggtggtttggacatgtagagagaagacttatggattc 42639223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 20105831 - 20105775
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||| ||||||| | || |||||||||||||| |||||||||||||||||||||    
T  20105831 gagatgatgatgttgcgatggatgtgtggtaagactagacgagatatgattagaaat 20105775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 47611742 - 47611798
Alignment:
Q  118 gtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||| |||||| |||||| || |||||||||||||||||||||| |||||||||||    
T  47611742 gtagaaaagatgatggaaaataggcttaggtggtttgggcatgtagagagaagacct 47611798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 49987346 - 49987406
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||||||||||||||||||||||| | ||||||| ||||  |||| ||||||||||    
T  49987346 agcagagatgaggatgttgtgttgaatgtttagtaagactagacatgataggattagaaat 49987406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 31960093 - 31960026
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  31960093 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 31960026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 43433927 - 43433994
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  43433927 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 43433994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 52569794 - 52569727
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  52569794 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 52569727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 53707797 - 53707864
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  53707797 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 53707864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 31339540 - 31339605
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    |||| |||||||||||| || ||||| |||| ||||||||||||||||| ||||||| |||||||||    
T  31339540 gtagaacctatggtagaaaa-atggtcgaaactaagcttaggtggtttgagcatgtagagagaagac 31339605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 38571024 - 38570950
Alignment:
Q  108 agcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggattc 182  Q
    ||||||||| ||| | ||||| ||||||| || |||||||||||||||||||||| | ||||||| | |||||||    
T  38571024 agcacctatagtacaaaagatagtggaaactaggcttaggtggtttgggcatgtagaaagaagacatgtggattc 38570950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 30853373 - 30853426
Alignment:
Q  119 tagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    |||| ||||| ||||||| | ||||||||||||||||||||||| |||||||||    
T  30853373 tagacaagatagtggaaactcagcttaggtggtttgggcatgtagagagaagac 30853426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 436232 - 436300
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| || |||||||||||| |||||||||||    
T  436232 gtagcacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagacct 436300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 31403384 - 31403324
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||||| ||||||| |||||||||||||| |||  ||||| |||| ||||||||||    
T  31403384 agcagagatgatgatgttgagttgaatgtgtggtgagattagacgggataggattagaaat 31403324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 182
Target Start/End: Original strand, 33709931 - 33710003
Alignment:
Q  110 cacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggattc 182  Q
    ||||||| ||||| ||||||||||||| || | ||||||||||| |||||||  |||||||| || |||||||    
T  33709931 cacctatagtagaaaagatggtggaaactaggtttaggtggtttaggcatgtggagagaagaactgtggattc 33710003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 38266149 - 38266197
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttg 154  Q
    |||||||||||  |||||| ||||||||||| |||||||||||||||||    
T  38266149 gtagcacctataatagagaggatggtggaaactaagcttaggtggtttg 38266197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 41192839 - 41192907
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||  ||||| ||||||||||||| ||  |||||||| |||| ||||||| |||||||||||    
T  41192839 gtagcacctacagtagaaaagatggtggaaactagacttaggtgatttgtgcatgtagagagaagacct 41192907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 44860772 - 44860832
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||| ||||||||||||||||| |||||||||||||| ||| |  ||| ||||||||||    
T  44860772 agcagaaatgaggatgttgtgttggatgtgtggtaagactagatggaataagattagaaat 44860832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 44860862 - 44860914
Alignment:
Q  119 tagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaaga 171  Q
    |||| |||||||||||||  | |||||| ||||||||||||||||||||||||    
T  44860862 tagaaaagatggtggaaaccaggcttagatggtttgggcatgtatagagaaga 44860914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 45205208 - 45205156
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    |||||||||||||||||||| ||| |||||||||| ||||| |||| ||||||    
T  45205208 gagatgaggatgttgtgttggatgagtggtaagactagacgggataggattag 45205156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 49987435 - 49987487
Alignment:
Q  110 cacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgta 162  Q
    ||||||| ||||| ||||||||||||| || ||||||||||||||| ||||||    
T  49987435 cacctatagtagaaaagatggtggaaaataggcttaggtggtttggtcatgta 49987487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 50471541 - 50471597
Alignment:
Q  118 gtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||| ||||||||||||| || | ||| |||||||||||||||| |||||||||||    
T  50471541 gtagaaaagatggtggaaactaggtttaagtggtttgggcatgtagagagaagacct 50471597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 56375208 - 56375264
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||||||| |||| ||| |||||||||| |||| ||||| ||||||    
T  56375208 agcagagatgaggatgttgcgttggatgagtggtaagactagacaagataagattag 56375264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 33227212 - 33227279
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| | ||||||||||||| ||||||||||    
T  33227212 gtagcacctatagtagaaaagttggtagaaaataggcttagattgtttgggcatgtagagagaagacc 33227279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 45423542 - 45423597
Alignment:
Q  14 agatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||||||||||||||  ||||||||||||| ||||| ||||  |||||||||    
T  45423542 agatgaggatgttgtgttggttgtgtggtaagactagacgggatagaattagaaat 45423597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 48622822 - 48622755
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    |||||||| || ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  48622822 gtagcacccatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 48622755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 54470128 - 54470187
Alignment:
Q  12 agagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaataa 71  Q
    ||||||||||||||||  ||| |||||||||||||| ||| | ||||||||| |||||||    
T  54470128 agagatgaggatgttgcattggatgtgtggtaagactagatgggatatgatttgaaataa 54470187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 1793463 - 1793529
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||||||||| ||| | ||| |||| |||| ||||||||| |||||||| |||||| |||||||||    
T  1793463 gtagcacctatagtaaaaaagttggtagaaaataagcttagatggtttggacatgtagagagaagac 1793529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 2588905 - 2588959
Alignment:
Q  15 gatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||||||| |||| |||||||||||||| ||| | |||| ||||||||||    
T  2588905 gatgaggatgttgcgttggatgtgtggtaagactagaagggataggattagaaat 2588959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 7092583 - 7092525
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaa 67  Q
    ||||||||||||||||||||| || ||| |||||||| | ||| | |||||||||||||    
T  7092583 agcagagatgaggatgttgtgctggatgagtggtaagtctagaagggatatgattagaa 7092525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 20591579 - 20591513
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||||| ||| ||||| ||| |||| |||| |||| |||| ||||||||||||||| |||||||||    
T  20591579 gtagcacttatagtagaaaagttggtagaaaataagattagatggtttgggcatgtagagagaagac 20591513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 25755237 - 25755295
Alignment:
Q  11 cagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||||| ||||||||||  |||||||||||||| ||||  ||||||||| |||||    
T  25755237 cagagatgagaatgttgtgttagatgtgtggtaagactagacatgatatgattggaaat 25755295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 28497493 - 28497558
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||||||| | ||||| ||||| |||||||  | |||||||||||||||||||||| |||||||||    
T  28497493 gtagcacctttagtagaaaagattgtggaaaa-aggcttaggtggtttgggcatgtagagagaagac 28497558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 4440858 - 4440923
Alignment:
Q  108 agcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||| ||||| ||| |||| |||| || |||||| |||||||||||| || ||||||||||    
T  4440858 agcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatctagagagaagacc 4440923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 18499791 - 18499840
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagata 58  Q
    |||||| |||| |||||||||||| ||||||| |||||| ||||||||||    
T  18499791 agcagaaatgaagatgttgtgttggatgtgtgataagactagacgagata 18499840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 30621483 - 30621418
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaaga 171  Q
    ||||||| ||| ||||| ||||||||||||| || | ||||||| |||||||| ||| ||||||||    
T  30621483 gtagcacttatagtagaaaagatggtggaaaataggtttaggtgatttgggcacgtagagagaaga 30621418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 37797855 - 37797920
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaaga 171  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| |||||||| |||||| ||||||||    
T  37797855 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaaga 37797920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 40933255 - 40933222
Alignment:
Q  14 agatgaggatgttgtgttgaatgtgtggtaagac 47  Q
    |||||||||||||| |||||||||||||||||||    
T  40933255 agatgaggatgttgcgttgaatgtgtggtaagac 40933222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 4137057 - 4137009
Alignment:
Q  14 agatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgat 62  Q
    |||||||||| |||||||| |||||||||||||| |||| | |||||||    
T  4137057 agatgaggattttgtgttggatgtgtggtaagactagacaaaatatgat 4137009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 10209037 - 10209105
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    |||| |||||| ||||| |||||||  |||| ||| ||||| |||||||||||||||  ||||||||||    
T  10209037 gtagaacctatagtagaaaagatggcagaaactaaacttagttggtttgggcatgtagcgagaagacct 10209105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 12494668 - 12494724
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||||  |||| ||||||    
T  12494668 agcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattag 12494724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 13805509 - 13805469
Alignment:
Q  141 gcttaggtggtttgggcatgtatagagaagacctttggatt 181  Q
    |||||||||||||||| ||||| ||||||||||||| ||||    
T  13805509 gcttaggtggtttgggtatgtagagagaagacctttagatt 13805469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 17900398 - 17900458
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||| |||||||||||| |||| |||||||||||||| ||| | ||||  |||||||||    
T  17900398 agcagaaatgaggatgttgcgttggatgtgtggtaagactagatgggataaaattagaaat 17900458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 23906665 - 23906609
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||||||| |||| ||| |||| ||||| |||| ||||| ||||||    
T  23906665 agcagagatgaggatgttgcgttggatgagtggcaagactagacaagataggattag 23906609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 31403295 - 31403229
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||||| || |||||||||| || |||||||||| ||||||||||| |||||| ||||    
T  31403295 gtagcacctatagtagaaaa-atggtggaaactaggcttaggtgg-ttgggcatgtaaagagaacacct 31403229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 31960178 - 31960122
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||||  |||| ||||||    
T  31960178 agcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattag 31960122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 35690226 - 35690278
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||| |||| ||| || ||||||| |||||||||| ||||||    
T  35690226 gagatgaggatgttgcgttggatgagtagtaagactagacgagataggattag 35690278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 42293528 - 42293472
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgta 162  Q
    ||||||||||| ||||| |||||| |||||| |  |||||||||||||||| |||||    
T  42293528 gtagcacctatagtagaaaagatgatggaaactcggcttaggtggtttgggtatgta 42293472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 43433836 - 43433892
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||||||| |||| ||| |||| ||||| |||| ||||| ||||||    
T  43433836 agcagagatgaggatgttgcgttggatgagtggcaagactagacaagataggattag 43433892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 45094522 - 45094466
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||||||||||||||| |||||| |||| || |||| |||||  |||||||||    
T  45094522 gagatgaggatgttgtgttggatgtgtagtaatactagacaagatagtattagaaat 45094466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 48174457 - 48174401
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    |||| |||||||||||||| |||| ||| |||||||||| ||||  |||||||||||    
T  48174457 agcaaagatgaggatgttgcgttggatgagtggtaagactagacatgatatgattag 48174401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 175
Target Start/End: Complemental strand, 44147 - 44078
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctt 175  Q
    ||||||||||| ||||| ||||||| ||||| || |||||||||||||||||||||| ||||||||||||    
T  44147 gtagcacctatagtagaaaagatggcggaaaataggcttaggtggtttgggcatgtagagagaagacctt 44078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 31471 - 31538
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  31471 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 31538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 8e-17; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 5338727 - 5338795
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||||| ||||||||||||| | ||||||||||||||||||||| | |||||||||||    
T  5338727 gtagcacctatagtagaaaagatggtggaaactgagcttaggtggtttgggcatgcagagagaagacct 5338795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 27848084 - 27848016
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||| ||||||| |||||||| |||| ||||||||||||||||||||||| | |||||||||||    
T  27848084 gtagcacctgtggtagaaaagatggtagaaaataagcttaggtggtttgggcatgcagagagaagacct 27848016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 48431685 - 48431619
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||| ||||| ||||| ||||||||||||| || |||||||||||||||||||||| |||||||||    
T  48431685 gtagcccctatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagagaagac 48431619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 4379927 - 4379983
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||||||||||||||| |||||||||||||| |||  ||||||||||||||||    
T  4379927 gagatgaggatgttgtgttggatgtgtggtaagactagaaaagatatgattagaaat 4379983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 9599758 - 9599702
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||| |||||||||||    
T  9599758 agcagagatgaggatgttgtgttggatgagtggtaagactagacgggatatgattag 9599702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 35828829 - 35828761
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||||||||| ||||||||||||| || | ||||||||||||| | |||| |||||||||||    
T  35828829 gtagcacctatggtagaaaagatggtggaaaatagggttaggtggtttggacgtgtagagagaagacct 35828761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 52442868 - 52442808
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||| ||||||||||||||||| |||||||||||||| |||| ||||| ||||||||||    
T  52442868 agcagacatgaggatgttgtgttggatgtgtggtaagactagacaagataagattagaaat 52442808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 34792628 - 34792561
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| ||||||| |||||| ||||||||||||||| ||||||||||    
T  34792628 gtagcacctatagtagaaaagttggtagaaagtaggcttagatggtttgggcatgtagagagaagacc 34792561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 43423726 - 43423788
Alignment:
Q  110 cacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||||| ||||| ||||||||||||| || ||||||||||||||| |||||| |||||||||    
T  43423726 cacctatagtagaaaagatggtggaaactaggcttaggtggtttggccatgtagagagaagac 43423788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 14226108 - 14226047
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagag 167  Q
    |||||||||||  |||| ||||||||||||| || |||||||||||||||||||||| ||||    
T  14226108 gtagcacctatcatagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagag 14226047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 40416374 - 40416439
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaaga 171  Q
    ||||||||||| ||||| |||||||||||||  | ||||||||||||| |||||||| ||||||||    
T  40416374 gtagcacctatagtagaaaagatggtggaaacgaggcttaggtggtttaggcatgtagagagaaga 40416439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 1661433 - 1661501
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||||| ||||||||||||| || ||| || ||||||| ||||||| |||||||||||    
T  1661433 gtagcacctatagtagaaaagatggtggaaaataggctcagatggtttgagcatgtagagagaagacct 1661501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 2544602 - 2544670
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||||| |||||||||||||  |  |||||||||||||| |||||| |||||||||||    
T  2544602 gtagcacctatagtagaaaagatggtggaaaacagacttaggtggtttggacatgtagagagaagacct 2544670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 3819135 - 3819059
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggattc 182  Q
    ||||||||||||||||| |||||||||| || ||  |||| |||||||||||||||| | ||||||| | |||||||    
T  3819135 gtagcacctatggtagaaaagatggtggtaactagacttaagtggtttgggcatgtagaaagaagacttgtggattc 3819059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 9509236 - 9509296
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||||||||||||||||||| ||| ||| |||||| ||||  |||||||||||||||    
T  9509236 agcagagatgaggatgttgtgttggatgagtgataagactagacaggatatgattagaaat 9509296  T

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Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 34827462 - 34827406
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||||||||||||||| ||| |||||||||| |||||| ||| ||||||||||    
T  34827462 gagatgaggatgttgtgttggatgagtggtaagactagacgatataagattagaaat 34827406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 1210748 - 1210815
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  1210748 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 1210815  T

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Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 8343125 - 8343062
Alignment:
Q  118 gtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggatt 181  Q
    ||||| ||||||||||||| || ||||||||||  |||||||||| ||||||||||| ||||||    
T  8343125 gtagaaaagatggtggaaactaggcttaggtggactgggcatgtagagagaagacctgtggatt 8343062  T

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Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 9509321 - 9509388
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||||||||  ||| || |||||||| ||||||||||||| ||||||||||    
T  9509321 gtagcacctatagtagaaaagatggtaaaaaataggcttaggtagtttgggcatgtagagagaagacc 9509388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 26016355 - 26016418
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaataat 72  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||  ||||| |||| |||||||    
T  26016355 agcagagatgaggatgttgcgttggatgtgtggtaagactagacaggatataattataaataat 26016418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 38868885 - 38868948
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaa 169  Q
    |||||||||||  |||| ||||||||||||| |  |||||||||||||||||||||| ||||||    
T  38868885 gtagcacctatcatagaaaagatggtggaaactcggcttaggtggtttgggcatgtagagagaa 38868948  T

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Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 51602059 - 51602126
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  51602059 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 51602126  T

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Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 13827994 - 13827928
Alignment:
Q  108 agcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||| ||||| ||||||||||||| || | ||||||||||||  |||||| |||||||||||    
T  13827994 agcacctatagtagaaaagatggtggaaactagggttaggtggtttgaacatgtagagagaagacct 13827928  T

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Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 8671921 - 8671986
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaaga 171  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||    
T  8671921 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 8671986  T

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Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 1661344 - 1661404
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||||| ||||||||||||||||| || |||||| ||| | |||| ||||||||||    
T  1661344 agcagagatgaagatgttgtgttgaatgtctgataagactagatgtgataggattagaaat 1661404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 32404801 - 32404737
Alignment:
Q  110 cacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||| ||| | ||||||||||||| || |||||||||||||||  ||||| |||||||||||    
T  32404801 cacctatagtaaaaaagatggtggaaaataggcttaggtggtttggatatgtagagagaagacct 32404737  T

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Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 15085937 - 15086004
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| |||||||| |||||| ||||||||||    
T  15085937 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacc 15086004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 22090099 - 22090166
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| |||||||||||||||  |||||||||    
T  22090099 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagggagaagacc 22090166  T

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Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 23791923 - 23791848
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggatt 181  Q
    |||| ||| |||||||| |||||||| || | ||| ||||||||||||| ||||||| ||||||||| | ||||||    
T  23791923 gtaggacccatggtagaaaagatggtagatactaaacttaggtggtttgtgcatgtagagagaagacatgtggatt 23791848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 39140523 - 39140590
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| |||||||   ||| |  |||||||||||||||||||||| ||||||||||    
T  39140523 gtagcacctatagtagaaaagatggcaaaaaattggcttaggtggtttgggcatgtagagagaagacc 39140590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 51441040 - 51440977
Alignment:
Q  110 cacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  51441040 cacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 51440977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 10569328 - 10569278
Alignment:
Q  124 aagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||| ||| |  |||||||||||||||||||||| |||||||||||    
T  10569328 aagatggtgaaaacttggcttaggtggtttgggcatgtagagagaagacct 10569278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 32231233 - 32231167
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||||||||| ||||| ||  |||| |||| || |||||| ||||||||||||||| |||||||||    
T  32231233 gtagcacctatagtagaaaaattggtagaaaataggcttagatggtttgggcatgtagagagaagac 32231167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 4380016 - 4380081
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaaga 171  Q
    |||||| |||| ||||| ||||||||||||| |||| |||||||||||   |||||| ||||||||    
T  4380016 gtagcaactatagtagaaaagatggtggaaactaaggttaggtggtttatacatgtagagagaaga 4380081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 16822376 - 16822323
Alignment:
Q  16 atgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||||||||||| ||||||||||| || |||  ||||| ||||||||||    
T  16822376 atgaggatgttgtgttggatgtgtggtaatactagataagataggattagaaat 16822323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 36340083 - 36340014
Alignment:
Q  105 tgtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||||  |||| ||||||||||||| || | ||||||||||| | |||| | |||||||||||    
T  36340083 tgtagcacctatattagaaaagatggtggaaaataggtttaggtggtttagacatggagagagaagacct 36340014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 1210663 - 1210719
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||||  |||| ||||||    
T  1210663 agcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattag 1210719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 9592652 - 9592708
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||||  |||| ||||||    
T  9592652 agcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattag 9592708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 16822289 - 16822233
Alignment:
Q  118 gtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||| |||||||| |||| |  ||||||||||||||| |||||| |||||||||||    
T  16822289 gtagacaagatggtagaaactcggcttaggtggtttggacatgtagagagaagacct 16822233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 17815493 - 17815537
Alignment:
Q  124 aagatggtggaaagtaagcttaggtggtttgggcatgtatagaga 168  Q
    ||||||||||||| || |||||| ||||||||||||||| |||||    
T  17815493 aagatggtggaaactaggcttagttggtttgggcatgtagagaga 17815537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 19908318 - 19908250
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||| | ||||||| |||||  ||| ||||||| |||||||||||| |||||| ||||    
T  19908318 gtagcacctatagtaaaaaagatgggggaaaccaagtttaggtgatttgggcatgtagagagaaaacct 19908250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 30202494 - 30202438
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||||  |||| ||||||    
T  30202494 agcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattag 30202438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 40419557 - 40419617
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||||||||||| || ||||||||| |||||| || ||| ||||||  |||||||||    
T  40419557 agcagagatgaggatggtgcgttgaatgtatggtaaaactagatgagatagaattagaaat 40419617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 51812535 - 51812591
Alignment:
Q  113 ctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaa 169  Q
    |||| ||||| ||||||||||||| || ||||| ||| |||||||||||| ||||||    
T  51812535 ctatagtagaaaagatggtggaaactaggcttatgtgatttgggcatgtagagagaa 51812591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 52633532 - 52633476
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||||||||| |||||||||| |||||||| ||| | |||| || |||||||    
T  52633532 gagatgaggatgttgcgttgaatgtgcggtaagactagatgtgataagactagaaat 52633476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 3e-16; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 12966025 - 12966092
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| | ||| ||||||||||||| || |||||||||||||||||||||| ||||||||||    
T  12966025 gtagcacctatagaagaaaagatggtggaaactatgcttaggtggtttgggcatgtagagagaagacc 12966092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 169
Target Start/End: Complemental strand, 7189502 - 7189442
Alignment:
Q  109 gcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaa 169  Q
    |||||||| ||||| |||||||| |||| ||||||||||||||||||||||||| ||||||    
T  7189502 gcacctatagtagaaaagatggtagaaaataagcttaggtggtttgggcatgtagagagaa 7189442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 30200323 - 30200263
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||||||||||||||||||| |||||||||||||  ||| | |||||||||||||||    
T  30200323 agcagagatgaggatgttgtgttggatgtgtggtaagattagatgggatatgattagaaat 30200263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 42187473 - 42187537
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaag 170  Q
    |||||||||||  |||| ||||||||||||| || |||||||||||||||||||||| |||||||    
T  42187473 gtagcacctataatagaaaagatggtggaaaataggcttaggtggtttgggcatgtaaagagaag 42187537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 38920797 - 38920859
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagaga 168  Q
    ||||||||||| ||||| ||||||||||||| || ||||| |||||||||||||||| |||||    
T  38920797 gtagcacctatagtagaaaagatggtggaaactaggcttaagtggtttgggcatgtagagaga 38920859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 40169652 - 40169718
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||||| ||| ||||| ||||||||||||| || |||||||||||||||||||||| ||| |||||    
T  40169652 gtagcacttatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagataagac 40169718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 41948532 - 41948594
Alignment:
Q  119 tagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggatt 181  Q
    |||| ||||||||||||| || ||||| |||||||||||||||| ||||||||||| ||||||    
T  41948532 tagaaaagatggtggaaactaggcttaagtggtttgggcatgtagagagaagacctctggatt 41948594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 47848677 - 47848743
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||| ||||| ||||| ||||||||||||| || |||||||||||||||||||||  |||||||||    
T  47848677 gtagcgcctatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtcgagagaagac 47848743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 27021971 - 27021906
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaaga 171  Q
    ||||||||||| ||||| ||| ||||| ||| || |||||||||||||||||||||| ||||||||    
T  27021971 gtagcacctatagtagaaaagttggtgaaaactaggcttaggtggtttgggcatgtagagagaaga 27021906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 28020967 - 28021032
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaaga 171  Q
    ||||||| ||| ||||| ||||||||||||| |  |||||||||||||||||||||| ||||||||    
T  28020967 gtagcacttatcgtagaaaagatggtggaaacttggcttaggtggtttgggcatgtagagagaaga 28021032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 19262712 - 19262644
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||||| |||||||| |||| |  |||||||||||||| ||||||| |||||||||||    
T  19262712 gtagcacctattgtagaaaagatggtagaaacttggcttaggtggtttgagcatgtagagagaagacct 19262644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 36102044 - 36101976
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    |||||||||||  |||| |||||| |||||| || |||||||||||||||| ||||| |||||||||||    
T  36102044 gtagcacctataatagaaaagatgttggaaaataggcttaggtggtttggggatgtagagagaagacct 36101976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 36514486 - 36514410
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggattc 182  Q
    ||||||||||| ||||| |||||||| |||| ||  ||||||||||||||||||||| ||||| ||| | |||||||    
T  36514486 gtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagacgacttgtggattc 36514410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 5335840 - 5335883
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagac 52  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||    
T  5335840 agcagagatgaggatgttgcgttgaatgtgtggtaagactagac 5335883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 12841554 - 12841487
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  12841554 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 12841487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 13859287 - 13859220
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  13859287 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 13859220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 34869423 - 34869490
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  34869423 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 34869490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 35906480 - 35906413
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  35906480 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 35906413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 49029279 - 49029346
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  49029279 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 49029346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 40139279 - 40139221
Alignment:
Q  10 gcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaa 68  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||| |||| |||||||||    
T  40139279 gcagagacgaggatgttgtgtgggatgtgtggtaagactagacgggataagattagaaa 40139221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 47848596 - 47848650
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaa 67  Q
    |||||||||||||||||||| |||||||||||||| ||||| |||| ||| ||||    
T  47848596 gagatgaggatgttgtgttggatgtgtggtaagactagacgggataggatcagaa 47848650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 2886001 - 2885936
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaaga 171  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||    
T  2886001 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 2885936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 24549954 - 24549905
Alignment:
Q  124 aagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    |||||| |||||| || |||||||||||||||||||||| ||||||||||    
T  24549954 aagatgatggaaactaggcttaggtggtttgggcatgtagagagaagacc 24549905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 35713719 - 35713764
Alignment:
Q  127 atggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    |||||||||| || |||||||||||||||||||||| |||||||||    
T  35713719 atggtggaaaataggcttaggtggtttgggcatgtagagagaagac 35713764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 48736256 - 48736203
Alignment:
Q  16 atgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||||||| ||||||||||||||||||| ||| ||||||  |||||||||    
T  48736256 atgaggatgttgcgttgaatgtgtggtaagactagatgagataaaattagaaat 48736203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 6420747 - 6420703
Alignment:
Q  128 tggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||||||| || |||||||||||||||||||||| |||||||||    
T  6420747 tggtggaaactaggcttaggtggtttgggcatgtagagagaagac 6420703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 7273046 - 7273110
Alignment:
Q  110 cacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| |||||||||||    
T  7273046 cacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtacagagaagacct 7273110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 14593679 - 14593723
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacg 53  Q
    ||||||||||||||||||| |||| |||||||||||||| |||||    
T  14593679 agcagagatgaggatgttgcgttggatgtgtggtaagactagacg 14593723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 16013202 - 16013246
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacg 53  Q
    ||||||||||||||||||| |||| |||||||||||||| |||||    
T  16013202 agcagagatgaggatgttgcgttggatgtgtggtaagactagacg 16013246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 24550051 - 24549991
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||||||||||||||||||| |||||| ||||||| |||    ||||||||||||||    
T  24550051 agcagagatgaggatgttgtgttggatgtgttgtaagactagatagaatatgattagaaat 24549991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 28628212 - 28628144
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||  ||||| | ||||||||||| |  |||||||||||||||||||||| |||||| ||||    
T  28628212 gtagcacctagagtagaaatgatggtggaaaattggcttaggtggtttgggcatgtaaagagaaaacct 28628144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 30200238 - 30200174
Alignment:
Q  110 cacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||| ||||| ||||||||||||| || ||||||||| ||| |||||||| | |||||||||    
T  30200238 cacctatagtagaaaagatggtggaaactaggcttaggtgattttggcatgtaaatagaagacct 30200174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 37617862 - 37617918
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||||||| |||| ||| |||||||||| |||| ||||| ||||||    
T  37617862 agcagagatgaggatgttgcgttggatgagtggtaagactagacaagataggattag 37617918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 42187393 - 42187448
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||||||||||||||| |||||| ||||||| ||||| ||||| |||||||||    
T  42187393 gagatgaggatgttgtgttggatgtgtagtaagactagacgggatat-attagaaat 42187448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 6374871 - 6374938
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||| ||||||| ||||||||||    
T  6374871 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgagcatgtagagagaagacc 6374938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 172
Target Start/End: Original strand, 7220750 - 7220813
Alignment:
Q  109 gcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    |||||||| ||||| |||||| | |||| |  |||||||||||||||||||||| |||||||||    
T  7220750 gcacctattgtagaaaagatgatagaaacttggcttaggtggtttgggcatgtagagagaagac 7220813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 11593963 - 11594030
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || | |||| ||||||||||||||| ||||||||||    
T  11593963 gtagcacctatagtagaaaagttggtagaaaatacggttagatggtttgggcatgtagagagaagacc 11594030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 22349623 - 22349690
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| |||||| |||||||| ||||||||||    
T  22349623 gtagcacctatagtagaaaagttggtagaaaataggcttagatggttttggcatgtagagagaagacc 22349690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 31005226 - 31005293
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || | |||| ||||||||||||||| ||||||||||    
T  31005226 gtagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaagacc 31005293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 33072955 - 33073022
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| || |||||||||||| ||||||||||    
T  33072955 gtagcacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagacc 33073022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 36514569 - 36514510
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaa 68  Q
    ||||||||||||||||||| |||| |||||||||||||| | ||| ||||  ||||||||    
T  36514569 agcagagatgaggatgttgcgttggatgtgtggtaagactaaacgggatagaattagaaa 36514510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 39906649 - 39906582
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| || |||||||||||| ||||||||||    
T  39906649 gtagcacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagacc 39906582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 43281677 - 43281744
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| |||||||| |||||| ||||||||||    
T  43281677 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacc 43281744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 45836759 - 45836692
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| |||||||| |||||| ||||||||||    
T  45836759 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacc 45836692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 18605425 - 18605359
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    |||||||||||  || | |||||||| |||| ||| ||||||||||||| ||||||| |||||||||    
T  18605425 gtagcacctatattataaaagatggtagaaactaaacttaggtggtttgagcatgtagagagaagac 18605359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 18637565 - 18637631
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    |||||||||||  || | |||||||| |||| ||| ||||||||||||| ||||||| |||||||||    
T  18637565 gtagcacctatattataaaagatggtagaaactaaacttaggtggtttgagcatgtagagagaagac 18637631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 18650999 - 18651065
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    |||||||||||  || | |||||||| |||| ||| ||||||||||||| ||||||| |||||||||    
T  18650999 gtagcacctatattataaaagatggtagaaactaaacttaggtggtttgagcatgtagagagaagac 18651065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 25579356 - 25579290
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    |||||||| || | ||| || |||||||||| || |||||||||||||||| ||||| |||||||||    
T  25579356 gtagcacccatagcagaaaaaatggtggaaaataggcttaggtggtttggggatgtagagagaagac 25579290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 31005141 - 31005203
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaataa 71  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||||  |||| |||||| |||||    
T  31005141 agcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaataa 31005203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 36869653 - 36869615
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagac 47  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  36869653 agcagagatgaggatgttgtgttggatgagtggtaagac 36869615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 43282411 - 43282477
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||||||||| ||||| |||  |||||||| || |||||||||  ||||||||||| |||||||||    
T  43282411 gtagcacctatagtagaaaagtcggtggaaactaggcttaggtgaattgggcatgtagagagaagac 43282477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 44855446 - 44855384
Alignment:
Q  111 acctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    |||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  44855446 acctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 44855384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 46356135 - 46356069
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||||||||| ||||| ||| |||| |||| || | |||| ||||||||||||||| |||||||||    
T  46356135 gtagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaagac 46356069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 38135473 - 38135424
Alignment:
Q  124 aagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||||| || ||||||||||||||| |||||| | ||||||||    
T  38135473 aagatggtggaaaataggcttaggtggtttggacatgtagacagaagacc 38135424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 39811882 - 39811935
Alignment:
Q  16 atgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||||||  ||| |||||||||||||| ||||| |||| ||||||||||    
T  39811882 atgaggatgttgctttggatgtgtggtaagactagacgtgataggattagaaat 39811935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 5335923 - 5335999
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggattc 182  Q
    |||||| |||| ||||  |||||||| |||| ||  |||||||||||||||||| || |||||||| || |||||||    
T  5335923 gtagcatctatagtaggaaagatggtcgaaactagacttaggtggtttgggcatatagagagaagaactgtggattc 5335999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 11593878 - 11593934
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||||  |||| ||||||    
T  11593878 agcagagatgaggatgttgcgttggatgagtggtaagactagacaggataagattag 11593934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 12841639 - 12841583
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    |||||||||||||||||||||||| ||| ||||||| || ||||  |||| ||||||    
T  12841639 agcagagatgaggatgttgtgttggatgagtggtaaaactagacatgataggattag 12841583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 182
Target Start/End: Original strand, 14593772 - 14593844
Alignment:
Q  110 cacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggattc 182  Q
    ||||||| ||||| || ||||| |||| ||  |||||||| ||||||||||||  |||||||||| |||||||    
T  14593772 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattc 14593844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 26742175 - 26742127
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttg 154  Q
    ||||||||||| ||||| ||||||||||||| || | ||||||||||||    
T  26742175 gtagcacctatagtagaaaagatggtggaaaataggattaggtggtttg 26742127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 33072872 - 33072928
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||| ||||||| |||| ||| |||||||||| |||| ||||| ||||||    
T  33072872 agcagagatgatgatgttgcgttggatgagtggtaagactagacaagataggattag 33072928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 173
Target Start/End: Complemental strand, 33350082 - 33350018
Alignment:
Q  109 gcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    |||||||| ||||| ||| || | |||| || |||||| ||||||||||||||| ||||||||||    
T  33350082 gcacctatagtagaaaagttgctagaaaataggcttagatggtttgggcatgtagagagaagacc 33350018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 35906565 - 35906509
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||||  |||| ||||||    
T  35906565 agcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattag 35906509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 36136767 - 36136835
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||||| |||||||| |||| ||  ||||||| |||||||||| || |||||| ||||    
T  36136767 gtagcacctatagtagaaaagatggtagaaaatagtcttaggttgtttgggcatatagagagaatacct 36136835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 37617947 - 37618015
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaag-taagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| ||||  || |||||| ||||||||||||||| ||||||||||    
T  37617947 gtagcacctatagtagaaaagttggtagaaaaataggcttagatggtttgggcatgtagagagaagacc 37618015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 40830226 - 40830294
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| | ||| |||||||| |||| |   ||||||||||||||||||| | |||||||||||    
T  40830226 gtagcacctattgaagaaaagatggtagaaactctacttaggtggtttgggcatgaagagagaagacct 40830294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 46989906 - 46989974
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||||| |||||||| |||  | | |||||||||||||||||||| | ||| ||||||    
T  46989906 gtagcacctattgtagaaaagatggttgaatttcatcttaggtggtttgggcatgtgtggaggagacct 46989974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 3e-16; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 33667219 - 33667294
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggatt 181  Q
    ||||||||||| ||||| |||||||| |||| ||  ||||||||||||||||||||| ||||||||||| ||||||    
T  33667219 gtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagaagacctgtggatt 33667294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 21952274 - 21952329
Alignment:
Q  14 agatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||||||||| |||| |||||||||||||| |||||||||| ||||||||||    
T  21952274 agatgaggatgttgcgttgcatgtgtggtaagactagacgagataagattagaaat 21952329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 31636199 - 31636132
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| |||||||| |||| ||  ||||||||||||||||||||| ||||||||||    
T  31636199 gtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagaagacc 31636132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 28676598 - 28676668
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagaccttt 176  Q
    |||||| |||| ||||| ||||||||||||| ||  |||||||||||| |||||||| |||||||||||||    
T  28676598 gtagcagctatagtagaaaagatggtggaaaatagtcttaggtggtttcggcatgtagagagaagaccttt 28676668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 43558106 - 43558040
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    |||||| ||||  |||| ||||||||||||| |||||||||||||||||||||| || |||||||||    
T  43558106 gtagcatctataatagaaaagatggtggaaactaagcttaggtggtttgggcatatagagagaagac 43558040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 43475243 - 43475311
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||||| ||||||||||||| || |||||||||||||||| ||  | |||||||||||    
T  43475243 gtagcacctatagtagaaaagatggtggaaactaggcttaggtggtttgggtattcagagagaagacct 43475311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 4496387 - 4496454
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  4496387 gtagcacctatagtagaaaagctggtagaaaataggcttagatggtttgggcatgtagagagaagacc 4496454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 41833863 - 41833793
Alignment:
Q  106 gtagcacctatggtagagaa--gatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||||||| ||||  ||||||||||  || |||||||||||||||||||||| ||| |||||||    
T  41833863 gtagcacctatggtatagaaaagatggtggaacatatgcttaggtggtttgggcatgtagagacaagacct 41833793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 1287858 - 1287792
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| |||||||||    
T  1287858 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 1287792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 42199301 - 42199355
Alignment:
Q  118 gtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||| ||||||||||||| ||  ||||||||||||||||||||| |||||||||    
T  42199301 gtagaaaagatggtggaaactagacttaggtggtttgggcatgtagagagaagac 42199355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 1275267 - 1275332
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaaga 171  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||    
T  1275267 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 1275332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 8492664 - 8492627
Alignment:
Q  32 gaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||||||||||||||||||||||| |||||||||    
T  8492664 gaatgtgtggtaagaccagacgagatataattagaaat 8492627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 15489771 - 15489706
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaaga 171  Q
    |||| |||||| ||||| |||||||| |||| | ||||||| ||||||||||||||| ||||||||    
T  15489771 gtagtacctattgtagaaaagatggttgaaactcagcttagatggtttgggcatgtagagagaaga 15489706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 18351187 - 18351118
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggca-tgtatagagaagacct 174  Q
    ||||||||||| ||||| || ||||| |||| || |||||||||||||||||| |||| |||||||||||    
T  18351187 gtagcacctatagtagaaaatatggtagaaactaggcttaggtggtttgggcattgtagagagaagacct 18351118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 2712947 - 2713023
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggattc 182  Q
    ||||||||||| ||  | |||||||| || | ||  ||||||||||||||||||||| ||||||||||| |||||||    
T  2712947 gtagcacctatagtctaaaagatggtagagactagacttaggtggtttgggcatgtagagagaagacctgtggattc 2713023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 34273030 - 34273098
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    |||||||||||  |||| ||| |||| |||| || |||||| ||||||||||||||| |||||||||||    
T  34273030 gtagcacctataatagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacct 34273098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 14665717 - 14665784
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||||||| || | |||| || |||||| |||||||| |||||| ||||||||||    
T  14665717 gtagcacctatagtagagaagttgatagaaaataggcttagatggtttggacatgtagagagaagacc 14665784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 16347657 - 16347590
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| |||||||| |||||| ||||||||||    
T  16347657 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacc 16347590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 24178513 - 24178580
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||  ||||||||||    
T  24178513 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtggagagaagacc 24178580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 28977138 - 28977071
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||| ||||||| ||||||||||    
T  28977138 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgtgcatgtagagagaagacc 28977071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 38684970 - 38685037
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| |||||||| |||||| ||||||||||    
T  38684970 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacc 38685037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 14667766 - 14667816
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttggg 156  Q
    ||||||||||| ||||| ||||||||||||| ||  |||||||||||||||    
T  14667766 gtagcacctatagtagaaaagatggtggaaaatagacttaggtggtttggg 14667816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 6889014 - 6889071
Alignment:
Q  124 aagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggatt 181  Q
    ||||||||||||| || ||||| ||||||||| |||||| ||||||||| | ||||||    
T  6889014 aagatggtggaaaataggcttaagtggtttggacatgtagagagaagacttgtggatt 6889071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 14749309 - 14749386
Alignment:
Q  105 tgtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggattc 182  Q
    |||||||||||| ||||| ||  |||| |||| ||  ||||| |||||||| |||||| ||||||||||| |||||||    
T  14749309 tgtagcacctatagtagaaaaattggtagaaactagacttagatggtttggacatgtagagagaagacctgtggattc 14749386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 16134536 - 16134483
Alignment:
Q  16 atgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||||||||||| |||| ||||||||| ||| ||||||  |||||||||    
T  16134536 atgaggatgttgtgttggatgtatggtaagactagatgagataaaattagaaat 16134483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 27998343 - 27998384
Alignment:
Q  11 cagagatgaggatgttgtgttgaatgtgtggtaagaccagac 52  Q
    ||||||||||||||||| |||| |||||||||||||| ||||    
T  27998343 cagagatgaggatgttgcgttggatgtgtggtaagactagac 27998384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 27896 - 27944
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttg 154  Q
    ||||||||||| ||||| |||||| |||||| || ||||||||||||||    
T  27896 gtagcacctatagtagaaaagatgatggaaaataggcttaggtggtttg 27944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 79516 - 79584
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    |||| |||||| ||||| |||||||||||||  |   ||||||||||||| |||||| |||||||||||    
T  79516 gtagtacctatagtagaaaagatggtggaaaacataattaggtggtttggacatgtagagagaagacct 79584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 1287953 - 1287897
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||||  |||| ||||||    
T  1287953 agcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattag 1287897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 2075838 - 2075782
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||||||| |||| ||| || ||||||| |||| ||||| ||||||    
T  2075838 agcagagatgaggatgttgcgttggatgagttgtaagactagacaagataggattag 2075782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 6859384 - 6859460
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggattc 182  Q
    ||||||||||| ||  |||||||||||||||  | || |||||||||||| || ||| ||||||||| | |||||||    
T  6859384 gtagcacctatagtgaagaagatggtggaaaacaggcataggtggtttggacacgtagagagaagacttgtggattc 6859460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 6888931 - 6888971
Alignment:
Q  29 gttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||| |||||||||||||| ||| |||||||||||||||||    
T  6888931 gttggatgtgtggtaagactagatgagatatgattagaaat 6888971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 11002785 - 11002725
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||||||||||||| | || |||||||||||||| ||| | ||||  |||||||||    
T  11002785 agcagagatgaggatgttgcgctggatgtgtggtaagacgagatgggatagaattagaaat 11002725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 12492656 - 12492596
Alignment:
Q  113 ctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    |||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  12492656 ctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 12492596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 16347738 - 16347682
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||||||||| |||| ||| |||||||||| |||| | ||||||||| ||||    
T  16347738 gagatgaggatgttgcgttggatgagtggtaagactagacaatatatgattaaaaat 16347682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 21193910 - 21193858
Alignment:
Q  115 atggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagag 167  Q
    ||||||||||| |||||||||| ||  |||||||| |||||||||||| ||||    
T  21193910 atggtagagaatatggtggaaactagacttaggtgatttgggcatgtagagag 21193858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 38578782 - 38578734
Alignment:
Q  124 aagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    |||||||| |||| ||| ||||||||||||| ||||||| |||||||||    
T  38578782 aagatggtagaaactaaacttaggtggtttgagcatgtaaagagaagac 38578734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 8180783 - 8180857
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggat 180  Q
    ||||||||||| ||||| ||| |||| |||| ||||||||| ||||||||||||||| ||||||||||| |||||    
T  8180783 gtagcacctatagtagaaaagttggtagaaaataagcttagatggtttgggcatgtagagagaagacctgtggat 8180857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 13241016 - 13240958
Alignment:
Q  114 tatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    |||| |||| ||||||||||||| || |||||||||||||||||||||| |||||||||    
T  13241016 tatgttagaaaagatggtggaaactaggcttaggtggtttgggcatgtagagagaagac 13240958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 7825276 - 7825336
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||| ||||||||| |||| |||||||||||||| ||||  |||||||||||||||    
T  7825276 agcagagattaggatgttgcgttggatgtgtggtaagactagactggatatgattagaaat 7825336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 9556724 - 9556672
Alignment:
Q  17 tgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||||||||||| |||||||||||||  ||||| |||||||||||||||    
T  9556724 tgaggatgttgtgttggatgtgtggtaagattagacgggatatgattagaaat 9556672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 9647969 - 9647909
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||||||||||||| |||| |||||||||||||| ||| | |||| ||||||||||    
T  9647969 agcagagatgaggatgttgcgttggatgtgtggtaagactagatgtgataagattagaaat 9647909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 12141547 - 12141615
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||||| |||||||||||||  | |||||||||||||||||| ||| | |||||||||    
T  12141547 gtagcacctatagtagaaaagatggtggaaaagaggcttaggtggtttgggcacgtagaaagaagacct 12141615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 19024183 - 19024239
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgta 162  Q
    |||||||||||  | || |||||||||||||||||||||||||||||||| ||||||    
T  19024183 gtagcacctatatttgaaaagatggtggaaagtaagcttaggtggtttggacatgta 19024239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 43238372 - 43238305
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  43238372 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtaaagagaagacc 43238305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 25834684 - 25834758
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggat 180  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| |||||||| |||||| ||||||||||| |||||    
T  25834684 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacctgtggat 25834758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 18958910 - 18958959
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgg 155  Q
    ||||||||||| ||||| ||||||||||||| || |||||||||||||||    
T  18958910 gtagcacctatagtagaaaagatggtggaaaataggcttaggtggtttgg 18958959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 42543265 - 42543314
Alignment:
Q  133 gaaagtaagcttaggtggtttgggcatgtatagagaagacctttggattc 182  Q
    |||| ||| ||||||||||||||||||||| ||||||||||| |||||||    
T  42543265 gaaactaaacttaggtggtttgggcatgtacagagaagacctgtggattc 42543314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 8180698 - 8180754
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||  |||| ||||||    
T  8180698 agcagagatgaggatgttgtgttggatgagtggtaagactagacatgataggattag 8180754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 12734623 - 12734679
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||||||||||| || ||| |||||||||| ||||| |||| ||||||||||    
T  12734623 gagatgaggatgttgtgctggatgagtggtaagactagacgggataggattagaaat 12734679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 37393522 - 37393470
Alignment:
Q  18 gaggatgttgtgttgaatgt-gtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||||||||||||||| |||||||||| ||| |||||||||| ||||||    
T  37393522 gaggatgttgtgttgaatgttgtggtaagactagatgagatatgatcagaaat 37393470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 42092437 - 42092497
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||||| |||||||  ||| |||||| ||||||| ||||| |||||||||||||||    
T  42092437 agcagagatgatgatgttgcattggatgtgtagtaagactagacgggatatgattagaaat 42092497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 43752226 - 43752158
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||||| ||| |||| |||| || ||||||||| ||||| |||||| |||||||||||    
T  43752226 gtagcacctatagtagaaaaggtggtagaaaataggcttaggtgatttggacatgtagagagaagacct 43752158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 45077670 - 45077726
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||||||||| |||| |||||||||||||| |||| |||||  |||||||||    
T  45077670 gagatgaggatgttgcgttggatgtgtggtaagactagactagatagaattagaaat 45077726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 11992387 - 11992320
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| ||||||||| |||||||| ||| || ||||||||||    
T  11992387 gtagcacctatagtagaaaagttggtagaaaataagcttagatggtttggacatatagagagaagacc 11992320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 36183454 - 36183521
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| ||| ||||| |||||| |||||||| ||||||||||    
T  36183454 gtagcacctatagtagaaaagttggtagaaaataatcttagttggtttcggcatgtagagagaagacc 36183521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 38434954 - 38435021
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagta-agcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||||||||| ||||| ||||||||||||| || |  || ||||||||||||||||| |||||||||    
T  38434954 gtagcacctatagtagaaaagatggtggaaactagactttgggtggtttgggcatgtaaagagaagac 38435021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 38452964 - 38452897
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    |||||| |||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  38452964 gtagcatctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 38452897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 45367904 - 45367837
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| ||| ||||| |||||||| |||||| ||||||||||    
T  45367904 gtagcacctatagtagaaaagttggtagaaaataaccttagatggtttggacatgtagagagaagacc 45367837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 2610591 - 2610657
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||||||||| || || ||| |||| |||| || |||||| ||||||||||||||| |||||||||    
T  2610591 gtagcacctatagtggaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 2610657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 3481162 - 3481212
Alignment:
Q  124 aagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    |||||||||||||  | ||||||||||||||| |||||| |||||||||||    
T  3481162 aagatggtggaaaacaggcttaggtggtttggacatgtagagagaagacct 3481212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 14197437 - 14197375
Alignment:
Q  111 acctatggtagagaagatggtggaaagtaagctt-aggtggtttgggcatgtatagagaagac 172  Q
    |||||| ||||| ||||||||||||| || |||| |||||||||||||||||| || ||||||    
T  14197437 acctatagtagaaaagatggtggaaactaggctttaggtggtttgggcatgtagagtgaagac 14197375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 9556627 - 9556582
Alignment:
Q  127 atggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    |||||||||| || ||||||||||||| |||||||| |||||||||    
T  9556627 atggtggaaaataggcttaggtggtttaggcatgtagagagaagac 9556582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 11412724 - 11412777
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcat 159  Q
    ||||||||||| ||||| || |||||||||| || |||||||| ||||||||||    
T  11412724 gtagcacctatagtagaaaatatggtggaaaataggcttaggttgtttgggcat 11412777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 12026264 - 12026216
Alignment:
Q  126 gatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| || ||||||||||||||  |||||| |||||||||||    
T  12026264 gatggtggaaactaggcttaggtggtttgaccatgtagagagaagacct 12026216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 21834483 - 21834531
Alignment:
Q  21 gatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||| |||| |||||||||||||| ||| |||||| ||||||||||    
T  21834483 gatgttgagttggatgtgtggtaagactagatgagataagattagaaat 21834531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 23714622 - 23714562
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||| || ||||||||||| |||||||||||||| |||| | ||| ||||| ||||    
T  23714622 agcagagattagaatgttgtgttggatgtgtggtaagactagacaaaataggattaaaaat 23714562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 24102294 - 24102234
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||| || ||||||||||| |||||||||||||| |||| | ||| ||||| ||||    
T  24102294 agcagagattagaatgttgtgttggatgtgtggtaagactagacaaaataggattaaaaat 24102234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 32754620 - 32754680
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||| ||||||  ||||||| |||||||||||||||||| |||| ||| |||| |||||||    
T  32754620 agcatagatgaaaatgttgttttgaatgtgtggtaagactagacaagacatgactagaaat 32754680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 36183369 - 36183425
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||||  |||| ||||||    
T  36183369 agcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattag 36183425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 41763317 - 41763253
Alignment:
Q  110 cacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||| ||||| ||| |||| |||| || ||||||||||||||| |||| | |||||||||||    
T  41763317 cacctatagtagaaaagttggtagaaaataggcttaggtggtttggacatgcagagagaagacct 41763253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 9695634 - 9695698
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaag 170  Q
    ||||||||||| ||||| ||||||||||||| |  |||||||||||||||||||||| |||||||    
T  9695634 gtagcacctatagtagaaaagatggtggaaactcggcttaggtggtttgggcatgtagagagaag 9695698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 29700279 - 29700355
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggattc 182  Q
    ||||||||||| ||||| ||||||| |||||||  ||||||||||||||||||| || ||| |||||| ||||||||    
T  29700279 gtagcacctatagtagaaaagatggaggaaagttggcttaggtggtttgggcatatagagaaaagaccattggattc 29700355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 35643868 - 35643814
Alignment:
Q  118 gtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||| ||||||||||||| || |||||||||||||||||||||| |||||||||    
T  35643868 gtagaaaagatggtggaaaatatgcttaggtggtttgggcatgtagagagaagac 35643814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 13171926 - 13171865
Alignment:
Q  108 agcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaa 169  Q
    ||||||||| ||||| ||||||||||||| || ||||||||||||||||||| || ||||||    
T  13171926 agcacctatagtagaaaagatggtggaaaatatgcttaggtggtttgggcatataaagagaa 13171865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 45512774 - 45512709
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaaga 171  Q
    ||||||||||| ||||| |||||| |||||| ||||||||| |||||||||||| || ||||||||    
T  45512774 gtagcacctatagtagaaaagatgatggaaaataagcttagatggtttgggcatataaagagaaga 45512709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 12491417 - 12491350
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  12491417 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 12491350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 28300471 - 28300416
Alignment:
Q  14 agatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||||||||||||| |||||| ||||||| ||| |||||| ||||||||||    
T  28300471 agatgaggatgttgtgttggatgtgtagtaagactagatgagataagattagaaat 28300416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 36143287 - 36143346
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaa 68  Q
    ||||||||||||||||||||||||   |||||||||||| ||| |||||| |||||||||    
T  36143287 agcagagatgaggatgttgtgttggtcgtgtggtaagactagatgagataggattagaaa 36143346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 18474239 - 18474173
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||||||||| ||||| | ||||||||||| || |||||| ||||||| ||||||| |||||||||    
T  18474239 gtagcacctatagtagaaatgatggtggaaactaggcttagttggtttgagcatgtagagagaagac 18474173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 36069570 - 36069620
Alignment:
Q  18 gaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaa 68  Q
    ||||||||||||||| |||||||||||||| ||||| |||| |||||||||    
T  36069570 gaggatgttgtgttggatgtgtggtaagactagacgggataagattagaaa 36069620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 41972045 - 41971991
Alignment:
Q  118 gtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||| ||||||||||||| |||| ||||||||||||| |||||| |||||||||    
T  41972045 gtagaaaagatggtggaaaataagtttaggtggtttggacatgtagagagaagac 41971991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 174
Target Start/End: Original strand, 79081 - 79114
Alignment:
Q  141 gcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||||||||||||||||||||||||||    
T  79081 gcttaggtggtttgggcatgtatagagaagacct 79114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 12611537 - 12611613
Alignment:
Q  105 tgtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacctttggatt 181  Q
    |||||||||||  ||||| ||||||||||||| || |||||||||||||| | ||||| | |||| |||| ||||||    
T  12611537 tgtagcacctaaagtagaaaagatggtggaaactaggcttaggtggtttgcgtatgtagacagaacacctgtggatt 12611613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 16917199 - 16917251
Alignment:
Q  118 gtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaag 170  Q
    ||||| ||||||||| ||| || |||||||||||||||||||||| |||||||    
T  16917199 gtagaaaagatggtgcaaactaggcttaggtggtttgggcatgtaaagagaag 16917251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 30456575 - 30456535
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagacca 49  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  30456575 agcagagatgaggatgttgcgttggatgtgtggtaagacca 30456535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 30748472 - 30748528
Alignment:
Q  118 gtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||| ||||||||||||   | |||||||||||||||||||||| |||||||||||    
T  30748472 gtagaaaagatggtggaatcaaggcttaggtggtttgggcatgtagagagaagacct 30748528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 36545065 - 36545121
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||  |||| ||||||    
T  36545065 agcagagatgaggatgttgtgttggatgagtggtaagactagacatgataggattag 36545121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 39760788 - 39760728
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||||||||||||||||||| |||||||||| ||  |||| ||||| || |||||||    
T  39760788 agcagagatgaggatgttgtgttggatgtgtggtaggattagacaagataggagtagaaat 39760728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 41444605 - 41444549
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgta 162  Q
    ||||||||||| ||||| ||||||||||||| || | ||||||||||||| ||||||    
T  41444605 gtagcacctatagtagaaaagatggtggaaactaggtttaggtggtttggacatgta 41444549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 45419240 - 45419308
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||||| ||||||||  ||| ||  ||||||||||||||||||||| ||| |||||||    
T  45419240 gtagcacctatagtagaaaagatggtataaaatagacttaggtggtttgggcatgtagagataagacct 45419308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 2776508 - 2776441
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| | |||||| |||| |  |||||||||||||||||||||  ||||||||||    
T  2776508 gtagcacctatcgtagaaatgatggtagaaactcggcttaggtggtttgggcatgttgagagaagacc 2776441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 29520583 - 29520638
Alignment:
Q  14 agatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||||||||| |||| |||||||||||||| ||| | |||| ||||||||||    
T  29520583 agatgaggatgttgcgttggatgtgtggtaagactagatgggataggattagaaat 29520638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 36545156 - 36545219
Alignment:
Q  110 cacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||||||    
T  36545156 cacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 36545219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 36565520 - 36565457
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaa 169  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| ||||||||||||||| ||||||    
T  36565520 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 36565457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 6510784 - 6510730
Alignment:
Q  15 gatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||| |||||||||||| ||  |||||||||| ||| |||||||||||||||||    
T  6510784 gatgatgatgttgtgttggataagtggtaagactagatgagatatgattagaaat 6510730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 16252860 - 16252913
Alignment:
Q  16 atgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||||||||||| |||||||||||||  ||| ||||||  |||||||||    
T  16252860 atgaggatgttgtgttggatgtgtggtaagattagatgagataaaattagaaat 16252913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 36395229 - 36395160
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagctt-aggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||||| ||| |||| |||| || |||| || ||||||||||||||| |||||||||||    
T  36395229 gtagcacctatagtagaaaagttggtagaaaataggctttagatggtttgggcatgtagagagaagacct 36395160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 40813327 - 40813392
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaaga 171  Q
    ||||||||||| ||||| ||| |||| |||| || | |||| ||||||||||||||| ||||||||    
T  40813327 gtagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaaga 40813392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 43904947 - 43904876
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaa---gcttaggtggtttgggcatgtatagagaagacct 174  Q
    |||||| |||| ||||| ||||||| ||||| |||   ||||||||||||||| |||||| |||||||||||    
T  43904947 gtagcatctatagtagaaaagatggaggaaaataataagcttaggtggtttggacatgtagagagaagacct 43904876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 44681435 - 44681386
Alignment:
Q  14 agatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgatt 63  Q
    ||||||||||||||| ||| |||||||||||||| |||||  ||||||||    
T  44681435 agatgaggatgttgtattggatgtgtggtaagactagacggaatatgatt 44681386  T

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Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 17491888 - 17491832
Alignment:
Q  118 gtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||| || |||||||| | ||| ||||||||||||||| ||||| |||||||||||    
T  17491888 gtagaaaatatggtggacaataaacttaggtggtttgggtatgtagagagaagacct 17491832  T

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Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 33511278 - 33511338
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||| |||||||||||| | |  |||||||||||||| | | |||||||||||||||||    
T  33511278 agcagaaatgaggatgttgcgcttgatgtgtggtaagactatatgagatatgattagaaat 33511338  T

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Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 36143368 - 36143436
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| | |||  |||||||||||| ||  |||||||||||||||||| || ||| |||||||    
T  36143368 gtagcacctatagcagaatagatggtggaaaatagacttaggtggtttgggcatttagagaaaagacct 36143436  T

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Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 36395314 - 36395258
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||||  |||| ||||||    
T  36395314 agcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattag 36395258  T

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Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 39946860 - 39946928
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| |||||||| |||||| | |||||||||    
T  39946860 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagaaagaagacct 39946928  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 44681318 - 44681250
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    |||||||||||  |||| ||||||||||||| |||||||||  |||||||  || || |||||||||||    
T  44681318 gtagcacctataatagaaaagatggtggaaaataagcttagaaggtttggaaatctagagagaagacct 44681250  T

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Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 33084061 - 33084129
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||||||||| |||||||| |||| ||  ||||||||||||||| ||||| |||||||||||    
T  33084061 gtagcacctatggtagaaaagatggtagaaactagacttaggtggtttgggaatgtagagagaagacct 33084129  T

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Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 14389446 - 14389379
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    ||||||||||| ||||| |||||||||||||  || |||||||||||||| |||||| |||||||||||    
T  14389446 gtagcacctatcgtagaaaagatggtggaaacaaa-cttaggtggtttggacatgtagagagaagacct 14389379  T

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Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 6293733 - 6293678
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgatta 64  Q
    |||||||||||||||||||||||| ||||||||||| |  |||| |||||||||||    
T  6293733 agcagagatgaggatgttgtgttggatgtgtggtaaaattagactagatatgatta 6293678  T

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Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 9593973 - 9593919
Alignment:
Q  118 gtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagac 172  Q
    ||||| |||||||| |||| || |||||||||||||||||||||| |||||||||    
T  9593973 gtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagac 9593919  T

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Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 33997801 - 33997765
Alignment:
Q  126 gatggtggaaagtaagcttaggtggtttgggcatgta 162  Q
    ||||||||||| |||||||||||||||||||||||||    
T  33997801 gatggtggaaactaagcttaggtggtttgggcatgta 33997765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 33998368 - 33998308
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||||| ||||||| |||| |||||||||||||| ||| | |||| ||||||||||    
T  33998368 agcagagatgaagatgttgcgttggatgtgtggtaagactagatgtgataggattagaaat 33998308  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 5258427 - 5258360
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| |||||||| |||||| ||||||||||    
T  5258427 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacc 5258360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 5631741 - 5631792
Alignment:
Q  14 agatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||||||| ||| |||||||||| ||||  |||||||||||    
T  5631741 agatgaggatgttgtgttggatgagtggtaagactagaccggatatgattag 5631792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 24665818 - 24665881
Alignment:
Q  111 acctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacct 174  Q
    |||||| ||||| || ||||| |||| || ||||||||||||||| |||||| |||||||||||    
T  24665818 acctatagtagaaaatatggtagaaaataggcttaggtggtttggacatgtagagagaagacct 24665881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 28085379 - 28085446
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| |||||||| |||||| ||||||||||    
T  28085379 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggccatgtagagagaagacc 28085446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 32755837 - 32755880
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagac 52  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||    
T  32755837 agcagagatgaggatgttgtgttggatgagtggtaagactagac 32755880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 46
Target Start/End: Complemental strand, 5129198 - 5129164
Alignment:
Q  12 agagatgaggatgttgtgttgaatgtgtggtaaga 46  Q
    |||||||||||||||| ||||||||||||||||||    
T  5129198 agagatgaggatgttgcgttgaatgtgtggtaaga 5129164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 2079343 - 2079408
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaaga 171  Q
    |||||| |||| ||||| ||||||||||||| || ||||| ||||||| || ||||| ||||||||    
T  2079343 gtagcatctatagtagaaaagatggtggaaaataggcttaagtggtttaggtatgtagagagaaga 2079408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 4948578 - 4948529
Alignment:
Q  118 gtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagag 167  Q
    ||||| ||||||||||||| |  ||||||||||||||||| |||||||||    
T  4948578 gtagaaaagatggtggaaattcggcttaggtggtttgggcctgtatagag 4948529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 4955549 - 4955500
Alignment:
Q  118 gtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagag 167  Q
    ||||| ||||||||||||| |  ||||||||||||||||| |||||||||    
T  4955549 gtagaaaagatggtggaaattcggcttaggtggtttgggcctgtatagag 4955500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 7513750 - 7513690
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||| | |||||||  |||| ||||||||||||| ||||| ||||| |||||||||    
T  7513750 agcagagataaagatgttgccttgagtgtgtggtaagactagacgcgatataattagaaat 7513690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 8364575 - 8364631
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgta 162  Q
    |||||| |||| ||||| ||| |||| |||| || ||||||||||||||||||||||    
T  8364575 gtagcaactatagtagaaaaggtggttgaaaataggcttaggtggtttgggcatgta 8364631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 9594072 - 9594020
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||||||||| |||| ||| |||||||||| ||||| |||| ||||||    
T  9594072 gagatgaggatgttgcgttggatgagtggtaagactagacgggataggattag 9594020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 10100217 - 10100161
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    ||||||||||||||| |||  ||| |||||||||| |||| | ||||||||||||||    
T  10100217 gagatgaggatgttgcgttagatgagtggtaagactagacaatatatgattagaaat 10100161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 12134265 - 12134205
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattagaaat 69  Q
    |||||||||||| ||||||||||| |||||||| ||||| ||| || |||  |||||||||    
T  12134265 agcagagatgagaatgttgtgttggatgtgtggcaagacaagatgatatagaattagaaat 12134205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 26291700 - 26291732
Alignment:
Q  13 gagatgaggatgttgtgttgaatgtgtggtaag 45  Q
    ||||||| |||||||||||||||||||||||||    
T  26291700 gagatgatgatgttgtgttgaatgtgtggtaag 26291732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 11802 - 11866
Alignment:
Q  107 tagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaaga 171  Q
    |||||||||| ||||| |||||||| | || |  |||||||||||||||||||||| ||||||||    
T  11802 tagcacctattgtagaaaagatggtaggaactcggcttaggtggtttgggcatgtagagagaaga 11866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 1227 - 1160
Alignment:
Q  106 gtagcacctatggtagagaagatggtggaaagtaagcttaggtggtttgggcatgtatagagaagacc 173  Q
    ||||||||||| ||||| ||| |||| |||| || |||||| |||||||| |||||| ||||||||||    
T  1227 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggccatgtagagagaagacc 1160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 25809 - 25753
Alignment:
Q  9 agcagagatgaggatgttgtgttgaatgtgtggtaagaccagacgagatatgattag 65  Q
    ||||||||| |||||||||||||| ||| |||||||||| ||||  |||| ||||||    
T  25809 agcagagattaggatgttgtgttggatgagtggtaagactagacatgataggattag 25753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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