View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4426_high_59 (Length: 205)
Name: NF4426_high_59
Description: NF4426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4426_high_59 |
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Alignment Details
Target: chr1 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 371173 - 371010
Alignment:
| Q |
13 |
catcaaaagataatttgcacaggagatgaattcttaatacggaagatttacagtgtgtaggagagtgtggagaacaagataacataaatcacttattttt |
112 |
Q |
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| T |
371173 |
catcaaaagataatttgcacaggagatgaattcttaatacggaagagttacagtgtgtaggagagtgtggagaacaagataacataaatcacttattttt |
371074 |
T |
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| Q |
113 |
tgtgtgctcgnnnnnnngcaaagtatggccaaggattgctaagtggttgggtgcatatgtggtggtgtatcacaataac |
191 |
Q |
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| T |
371073 |
tgtgt---------------aagtatggccaaggattgctaagtggttgggtgcatatgtggtggtgtatcacaataac |
371010 |
T |
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