View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4426_low_23 (Length: 345)
Name: NF4426_low_23
Description: NF4426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4426_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 19 - 335
Target Start/End: Complemental strand, 33017075 - 33016759
Alignment:
| Q |
19 |
agttctgaagcttgacataatcaaaagcttttgatcaagttgatgggcgatacctctcagatgttatgtcaaaggcaggcttctccaatcaatgaataaa |
118 |
Q |
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| T |
33017075 |
agttctgaagcttgacataatcaaaagcttttgatcaagttgatgggcgatacctctcagatgttatgtcaaaggcaggcttctccaatcaatgaataaa |
33016976 |
T |
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| Q |
119 |
tggatttgtttggttatgtgtgacctctgtcaactacaacgtctgcctcaataatgaagcagttggtccgattttccaaatgaagtgccttacctctata |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33016975 |
tggatttgtttggttatgtgtgacctctgtcaactacaacgtctgcctcaataatgaagcagttggtccgattttccaaatgaagtgccttacctctata |
33016876 |
T |
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| Q |
219 |
tcatatgtgcaaagaacatctctgtcttatcaagcatagagtttcacaaggagctattcataggtccaaaatccatcgaggtacgccttctattagccac |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33016875 |
tcatatgtgcaaagaacatctctgtcttatcaagcatagagtttcacaaggagctattcataggtccaaaatccatcgaggtacgccttctattagccac |
33016776 |
T |
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| Q |
319 |
cttttttcgatgatgat |
335 |
Q |
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||||||||||||||||| |
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| T |
33016775 |
cttttttcgatgatgat |
33016759 |
T |
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