View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4426_low_38 (Length: 275)
Name: NF4426_low_38
Description: NF4426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4426_low_38 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 7 - 275
Target Start/End: Original strand, 31869639 - 31869907
Alignment:
| Q |
7 |
cacagaccagcaagatatttgagtgttaataattctcaaccacaaacatcgacttcaaaaaataannnnnnncgatgttttaaatggcagtgtaaaggtt |
106 |
Q |
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| T |
31869639 |
cacagaccagcaagatatttgagtgttaataattctcaaccacaaacatcgacttcaaaaaataatttttttcgatgttttaaatggcagtgtaaaggtt |
31869738 |
T |
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| Q |
107 |
acactacatttgccagcagacctttagattgcatcatgtaatgcagctgcaaaggttttaaacagaagtctgtgactgagatctgggcagcaacatcagg |
206 |
Q |
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| T |
31869739 |
acactacatttgccagcagacttttagattgcatcatgtaatgcagctgcaaaggttttaaacagaagtttgtgactgagatctgggcagcaacatcagg |
31869838 |
T |
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| Q |
207 |
gtttttgttgttactgtgactataattgagatagcatcggtcacatttgagtgcaattctctgttatat |
275 |
Q |
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| T |
31869839 |
gtttttgttgttactgtgactataattgagatagcatcggtcgcatttgagtgcaattctctgttatat |
31869907 |
T |
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