View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4427_low_32 (Length: 239)

Name: NF4427_low_32
Description: NF4427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4427_low_32
NF4427_low_32
[»] chr1 (25 HSPs)
chr1 (7-236)||(46154622-46154851)
chr1 (2-82)||(3415072-3415152)
chr1 (1-76)||(16386736-16386811)
chr1 (2-76)||(7183800-7183874)
chr1 (2-75)||(17327867-17327940)
chr1 (4-76)||(32270240-32270312)
chr1 (1-76)||(28340520-28340595)
chr1 (19-78)||(50540224-50540283)
chr1 (4-78)||(51264375-51264449)
chr1 (1-82)||(41972788-41972869)
chr1 (1-76)||(844941-845016)
chr1 (21-76)||(39281777-39281832)
chr1 (1-76)||(42510407-42510482)
chr1 (2-76)||(1351652-1351726)
chr1 (19-77)||(16451008-16451066)
chr1 (22-76)||(16476392-16476446)
chr1 (1-74)||(38087212-38087285)
chr1 (1-77)||(12890119-12890195)
chr1 (21-76)||(51703399-51703454)
chr1 (34-76)||(1601050-1601092)
chr1 (22-76)||(26765027-26765081)
chr1 (34-76)||(34663824-34663866)
chr1 (1-66)||(6711263-6711328)
chr1 (19-76)||(16437260-16437317)
chr1 (1-77)||(24339854-24339930)
[»] chr3 (16 HSPs)
chr3 (1-81)||(43175438-43175518)
chr3 (1-77)||(29584748-29584824)
chr3 (2-76)||(1344844-1344918)
chr3 (1-76)||(26282523-26282598)
chr3 (1-76)||(51259916-51259991)
chr3 (2-76)||(4851593-4851667)
chr3 (26-76)||(22484903-22484953)
chr3 (2-76)||(28675664-28675738)
chr3 (1-77)||(47958568-47958644)
chr3 (37-76)||(21373814-21373853)
chr3 (1-67)||(12349307-12349373)
chr3 (34-76)||(20609802-20609844)
chr3 (1-75)||(21221496-21221570)
chr3 (34-76)||(34026556-34026598)
chr3 (34-76)||(38213228-38213270)
chr3 (22-74)||(3864831-3864883)
[»] chr2 (26 HSPs)
chr2 (1-79)||(19513831-19513909)
chr2 (10-78)||(18793412-18793480)
chr2 (1-76)||(18685709-18685784)
chr2 (1-75)||(30798631-30798703)
chr2 (1-76)||(32497788-32497863)
chr2 (1-76)||(39461187-39461262)
chr2 (2-76)||(4641389-4641463)
chr2 (1-75)||(17540588-17540662)
chr2 (14-76)||(37004024-37004086)
chr2 (2-72)||(42365454-42365524)
chr2 (2-75)||(2085946-2086019)
chr2 (19-76)||(9717114-9717171)
chr2 (1-86)||(33366473-33366558)
chr2 (19-76)||(35114658-35114715)
chr2 (19-67)||(9733090-9733138)
chr2 (2-82)||(37308523-37308603)
chr2 (1-76)||(2645228-2645303)
chr2 (1-76)||(5278976-5279051)
chr2 (21-72)||(13829316-13829367)
chr2 (1-76)||(34338683-34338758)
chr2 (1-76)||(42706231-42706306)
chr2 (22-81)||(44284505-44284564)
chr2 (2-76)||(16104147-16104221)
chr2 (34-76)||(33889131-33889173)
chr2 (35-76)||(26418796-26418837)
chr2 (21-74)||(27462961-27463014)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-76)||(51312-51387)
[»] chr8 (22 HSPs)
chr8 (2-76)||(31513741-31513815)
chr8 (2-76)||(34101381-34101455)
chr8 (1-82)||(3251813-3251894)
chr8 (4-76)||(31731937-31732009)
chr8 (1-76)||(45446328-45446403)
chr8 (19-76)||(8673230-8673287)
chr8 (1-76)||(25478121-25478196)
chr8 (1-76)||(32020158-32020233)
chr8 (1-76)||(32303742-32303817)
chr8 (1-76)||(41709650-41709725)
chr8 (1-75)||(7394971-7395045)
chr8 (2-76)||(13407093-13407167)
chr8 (19-76)||(29563401-29563458)
chr8 (25-78)||(45113927-45113980)
chr8 (2-78)||(955094-955170)
chr8 (2-74)||(12753483-12753554)
chr8 (34-78)||(30543197-30543241)
chr8 (1-76)||(6386449-6386524)
chr8 (34-76)||(17805563-17805605)
chr8 (10-76)||(34063001-34063067)
chr8 (1-74)||(21272588-21272661)
chr8 (21-77)||(15001339-15001395)
[»] chr5 (14 HSPs)
chr5 (2-76)||(41790611-41790685)
chr5 (1-76)||(7523044-7523119)
chr5 (21-76)||(20119644-20119699)
chr5 (1-76)||(21739304-21739379)
chr5 (2-76)||(548221-548295)
chr5 (2-67)||(34794769-34794834)
chr5 (1-76)||(32528588-32528663)
chr5 (21-72)||(37148741-37148792)
chr5 (2-76)||(2351553-2351627)
chr5 (19-76)||(35701150-35701207)
chr5 (20-76)||(4818307-4818363)
chr5 (19-82)||(8136706-8136769)
chr5 (19-74)||(11963216-11963271)
chr5 (34-76)||(24181790-24181832)
[»] chr4 (21 HSPs)
chr4 (2-76)||(21579902-21579976)
chr4 (1-76)||(49152234-49152309)
chr4 (1-76)||(12600762-12600837)
chr4 (1-76)||(24002214-24002289)
chr4 (1-76)||(56154497-56154572)
chr4 (2-76)||(33177168-33177242)
chr4 (2-76)||(37865629-37865703)
chr4 (2-76)||(52319202-52319276)
chr4 (19-76)||(38520440-38520497)
chr4 (19-76)||(46680643-46680700)
chr4 (34-82)||(37931791-37931839)
chr4 (21-76)||(21202616-21202671)
chr4 (1-76)||(23521756-23521831)
chr4 (1-76)||(29785672-29785747)
chr4 (1-76)||(43640975-43641050)
chr4 (34-76)||(2786841-2786883)
chr4 (22-76)||(20694252-20694306)
chr4 (2-76)||(20802667-20802741)
chr4 (34-67)||(30942674-30942707)
chr4 (10-75)||(42869859-42869924)
chr4 (22-74)||(13110207-13110259)
[»] chr7 (26 HSPs)
chr7 (1-78)||(3892169-3892246)
chr7 (2-75)||(21784749-21784822)
chr7 (19-76)||(43189404-43189461)
chr7 (1-76)||(11322028-11322103)
chr7 (1-76)||(36769712-36769787)
chr7 (2-76)||(30849390-30849464)
chr7 (19-76)||(10932718-10932775)
chr7 (2-77)||(32873913-32873988)
chr7 (2-85)||(46408764-46408847)
chr7 (22-72)||(18386406-18386456)
chr7 (2-76)||(30599152-30599226)
chr7 (2-76)||(46633574-46633648)
chr7 (22-67)||(11822118-11822163)
chr7 (1-74)||(18470563-18470636)
chr7 (19-76)||(47316844-47316901)
chr7 (2-66)||(26371953-26372017)
chr7 (22-74)||(41211365-41211417)
chr7 (34-74)||(47442731-47442771)
chr7 (1-76)||(3922846-3922921)
chr7 (1-76)||(26994368-26994443)
chr7 (34-76)||(16962989-16963031)
chr7 (34-76)||(22631610-22631652)
chr7 (34-76)||(34117350-34117392)
chr7 (34-76)||(40753047-40753089)
chr7 (1-81)||(12982175-12982255)
chr7 (32-76)||(26910580-26910624)
[»] scaffold0027 (1 HSPs)
scaffold0027 (2-74)||(15047-15119)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-76)||(101822-101897)
[»] chr6 (22 HSPs)
chr6 (2-76)||(2614769-2614843)
chr6 (1-75)||(11212131-11212205)
chr6 (2-76)||(15277119-15277193)
chr6 (2-76)||(28502332-28502406)
chr6 (2-76)||(29814738-29814812)
chr6 (34-76)||(34684199-34684241)
chr6 (19-84)||(24203228-24203293)
chr6 (1-76)||(3932988-3933063)
chr6 (2-76)||(3259551-3259625)
chr6 (19-76)||(11613975-11614032)
chr6 (2-82)||(11381960-11382040)
chr6 (2-78)||(17867706-17867782)
chr6 (2-78)||(17877489-17877565)
chr6 (21-73)||(18057396-18057448)
chr6 (19-62)||(15277479-15277522)
chr6 (1-76)||(32805351-32805426)
chr6 (22-76)||(17443136-17443190)
chr6 (34-88)||(23636085-23636139)
chr6 (19-76)||(11279012-11279069)
chr6 (1-66)||(32410033-32410098)
chr6 (2-74)||(4494280-4494352)
chr6 (34-82)||(10959868-10959916)
[»] scaffold0208 (1 HSPs)
scaffold0208 (1-76)||(2486-2561)
[»] scaffold0169 (2 HSPs)
scaffold0169 (19-76)||(12702-12759)
scaffold0169 (19-76)||(18220-18277)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-82)||(23444-23525)


Alignment Details
Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 7 - 236
Target Start/End: Complemental strand, 46154851 - 46154622
Alignment:
Q  7 tgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactcataagatgttcgaggtttgtaccccgac 106  Q
    |||||| | |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||    
T  46154851 tgtcttgtgttatactgttctatcttatactgttttgtccagtacttactgttttgcaaactaaacacacccataaggtgttcgaggtttgtaccccaac 46154752  T
Q  107 ctatgcatataatatgcaatgtcatgagtcaagcccacggacgaatattgtatgttttaaactatacatgtttgatctaatttttagaagaagggaccaa 206  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46154751 ctatgcatataatatgcaatatcctgagtcaagcccacggacgaatattgtatgttttaaactatacatgtttgatctaatttttagaagaagggaccaa 46154652  T
Q  207 aattcattttataccgctctctgctcctcc 236  Q
    |||||||||||||||||| |||||| ||||    
T  46154651 aattcattttataccgctttctgcttctcc 46154622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 3415072 - 3415152
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactcataa 82  Q
    |||| |||||| | ||||| |||||||| || |||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  3415072 tgttttgtcttgtgttatattgttctatcttgtactgttttgtccagtacttactgttttacaaaccaaacacactcataa 3415152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 16386811 - 16386736
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| |||| ||||||||||| || ||||||| |||||||||||| ||||||||||||| ||||||||    
T  16386811 ctgttctgccttgtattgtactgttctatcttgtactgttctgtccaatacttgctgttttgcaaaccaaacacac 16386736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 7183874 - 7183800
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||||| | || ||||||||||| || ||||||| |||||| ||||||||||||||||||| ||||||||    
T  7183874 tgttctgtcttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaaacacac 7183800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 17327867 - 17327940
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacaca 75  Q
    ||||||| ||| |||| ||||||||||| |||||||||| ||||||||||||||| |||||||||  |||||||    
T  17327867 tgttctgccttgtattgtactgttctatcttatactgttctgtccaatacttacttttttgcaaatcaaacaca 17327940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 32270312 - 32270240
Alignment:
Q  4 ttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||| | || ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||||||||    
T  32270312 ttctgtcttgtgttgtactgttctatcttgtactgttttgtccagtacttgctgttttgcaaaccaaacacac 32270240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 28340520 - 28340595
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| || ||||||| ||||||||||||||||||||| |||| ||||||||    
T  28340520 ctgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttactgttttgtaaaccaaacacac 28340595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 50540283 - 50540224
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactc 78  Q
    ||||||||||| |||||||||| |||| | ||||||||||||||||||| ||||||||||    
T  50540283 tactgttctatcttatactgttctgtcaagtacttactgttttgcaaaccaaacacactc 50540224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 51264449 - 51264375
Alignment:
Q  4 ttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactc 78  Q
    ||||||||| | || ||||||||||| || ||||||| |||||||||||| ||| ||||||||| ||||||||||    
T  51264449 ttctgtcttgtgttgtactgttctatcttgtactgttctgtccaatacttgctgatttgcaaaccaaacacactc 51264375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 41972869 - 41972788
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactcataa 82  Q
    |||||||| ||| | || ||||||||||| || ||||||| |||||| ||||| ||||||||||||| |||||||| |||||    
T  41972869 ctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacacccataa 41972788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 844941 - 845016
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| || ||||||| |||||| ||||| ||||||||||||| ||||||||    
T  844941 ctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 845016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 39281832 - 39281777
Alignment:
Q  21 ctgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||| ||||||| || |||||| ||||||||||||||||||| ||||||||    
T  39281832 ctgttctatcttatactattctgtccagtacttactgttttgcaaaccaaacacac 39281777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 42510482 - 42510407
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| || ||||||| |||||| ||||||||||||||||||  ||||||||    
T  42510482 ctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaatcaaacacac 42510407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 1351652 - 1351726
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||| | || ||||||||||| || ||||||| |||| | ||||||||||||||||||| ||||||||    
T  1351652 tgttctgccttgtgttgtactgttctatcttgtactgttctgtcaagtacttactgttttgcaaaccaaacacac 1351726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 16451066 - 16451008
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacact 77  Q
    |||| |||||| || ||||||| |||||| ||||||||||||||||||| |||||||||    
T  16451066 tactattctatcttgtactgttctgtccagtacttactgttttgcaaaccaaacacact 16451008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 16476392 - 16476446
Alignment:
Q  22 tgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||||| |||| |||||| ||||||||||||||||||| ||||||||    
T  16476392 tgttctatcttatattgttatgtccagtacttactgttttgcaaaccaaacacac 16476446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38087212 - 38087285
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacac 74  Q
    |||||||| ||||| || ||||||||| | || ||||||| |||||| |||||| |||||||||||| ||||||    
T  38087212 ctgttctgccttatgttgtactgttctgtcttgtactgttatgtccagtacttaatgttttgcaaaccaaacac 38087285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12890195 - 12890119
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacact 77  Q
    |||||||| ||| | || ||||||||||| || ||||||| |||| | |||||||| |||||||||| |||||||||    
T  12890195 ctgttctgccttgtgttgtactgttctatcttgtactgttctgtctagtacttactattttgcaaaccaaacacact 12890119  T

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Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 51703399 - 51703454
Alignment:
Q  21 ctgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||| ||| || |||||||||||||| ||||| ||||||||||||| ||||||||    
T  51703399 ctgttatatcttgtactgttttgtccagtacttgctgttttgcaaaccaaacacac 51703454  T

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Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 1601092 - 1601050
Alignment:
Q  34 tactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||||||||| |||||||||||||||| || ||||||||    
T  1601092 tactgttttgtccagtacttactgttttgcagaccaaacacac 1601050  T

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Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 26765027 - 26765081
Alignment:
Q  22 tgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| || ||||||| |||||| ||||||||||||||||||  ||||||||    
T  26765027 tgttctatcttgtactgttctgtccagtacttactgttttgcaaatcaaacacac 26765081  T

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Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 34663866 - 34663824
Alignment:
Q  34 tactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||    
T  34663866 tactgttctgtccagtacttactgttttgcaaaccaaacacac 34663824  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 6711263 - 6711328
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaa 66  Q
    |||||||| ||| | || |||||||||||||| ||||||| |||||| |||||  |||||||||||    
T  6711263 ctgttctgccttgtgttgtactgttctattttgtactgttctgtccagtacttgatgttttgcaaa 6711328  T

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Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 16437317 - 16437260
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||||| |||||||||| |||||| || || ||||||| ||||| ||||||||    
T  16437317 tactgttctatcttatactgttctgtccagtatttgctgttttacaaaccaaacacac 16437260  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 24339854 - 24339930
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacact 77  Q
    |||||||| ||| | || ||||||||||| || ||||||| |||||| || || |||||||||| || |||||||||    
T  24339854 ctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctgttttgcagaccaaacacact 24339930  T

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Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 43175518 - 43175438
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactcata 81  Q
    |||||||||||| |||||||||||||||| || |||||||||||||| ||||| ||||||||||||| |||||||| ||||    
T  43175518 ctgttctgtcttgtattatactgttctatcttgtactgttttgtccagtacttgctgttttgcaaaccaaacacacccata 43175438  T

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Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 29584824 - 29584748
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacact 77  Q
    |||||||| ||||| || ||||||||||| || ||||||| |||||| ||||| ||||||||||||| |||||||||    
T  29584824 ctgttctgccttatgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacact 29584748  T

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Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 1344844 - 1344918
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||||| | || ||||||||||| || |||||||||||||| ||||| || |||||||||| ||||||||    
T  1344844 tgttctgtcttgtgttgtactgttctatcttgtactgttttgtccagtacttgctattttgcaaaccaaacacac 1344918  T

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Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 26282523 - 26282598
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||||||| | || ||||||||||| || ||||||| | |||| ||||| ||||||||||||| ||||||||    
T  26282523 ctgttctgtcttgtgttgtactgttctatcttgtactgttctatccagtacttgctgttttgcaaaccaaacacac 26282598  T

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Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 51259916 - 51259991
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| || ||||||| | |||| ||||||||||||||||||| ||||||||    
T  51259916 ctgttctgccttgtgttgtactgttctatcttgtactgttctatccagtacttactgttttgcaaaccaaacacac 51259991  T

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Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 4851593 - 4851667
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||| | || ||||||||||| || |||||||||||||  ||||| ||||||||||||| ||||||||    
T  4851593 tgttctgccttgtgttgtactgttctatcttgtactgttttgtccggtacttgctgttttgcaaaccaaacacac 4851667  T

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Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 22484903 - 22484953
Alignment:
Q  26 ctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||| |||||||||| |||||| ||||||||||||||||||| ||||||||    
T  22484903 ctatcttatactgttatgtccagtacttactgttttgcaaaccaaacacac 22484953  T

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Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 28675738 - 28675664
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||| | || ||||||||||| || ||||||| |||||| |||||| |||||||||||| ||||||||    
T  28675738 tgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttattgttttgcaaaccaaacacac 28675664  T

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Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 47958568 - 47958644
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacact 77  Q
    |||||||| ||| |||| || |||||||| || || |||| |||||| ||||| ||||||||||||| |||||||||    
T  47958568 ctgttctgccttgtattgtagtgttctatcttgtattgttctgtccagtacttgctgttttgcaaaccaaacacact 47958644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 21373853 - 21373814
Alignment:
Q  37 tgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  21373853 tgttctgtccaatacttactgttttgcaaaccaaacacac 21373814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 12349307 - 12349373
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaac 67  Q
    |||||||| ||| | || ||||||||||| || ||||||| |||||||||||| || ||||||||||    
T  12349307 ctgttctgccttgtgttgtactgttctatcttgtactgttatgtccaatacttgctcttttgcaaac 12349373  T

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Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 20609802 - 20609844
Alignment:
Q  34 tactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||    
T  20609802 tactgttctgtccagtacttactgttttgcaaaccaaacacac 20609844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 21221496 - 21221570
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacaca 75  Q
    |||||||| ||||| || ||||||||||| || ||||||| |||| | ||||| |||| |||||||| |||||||    
T  21221496 ctgttctgccttatgttgtactgttctatcttgtactgttctgtctagtacttgctgtattgcaaaccaaacaca 21221570  T

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Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 34026598 - 34026556
Alignment:
Q  34 tactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||    
T  34026598 tactgttctgtccagtacttactgttttgcaaaccaaacacac 34026556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 38213270 - 38213228
Alignment:
Q  34 tactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||| |||||||||||||||||||||| ||||||||    
T  38213270 tactgttctgtacaatacttactgttttgcaaaccaaacacac 38213228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 3864831 - 3864883
Alignment:
Q  22 tgttctattttatactgttttgtccaatacttactgttttgcaaactaaacac 74  Q
    |||||||| || ||||||| ||| || ||||||||||||||||||| ||||||    
T  3864831 tgttctatcttgtactgttctgtgcagtacttactgttttgcaaaccaaacac 3864883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 2e-20; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 19513831 - 19513909
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactca 79  Q
    |||||||||||| |||| ||||||||||| || ||||||||| |||| ||||||||||||||||||| |||||||||||    
T  19513831 ctgttctgtcttctattgtactgttctatcttgtactgttttatccagtacttactgttttgcaaaccaaacacactca 19513909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 18793412 - 18793480
Alignment:
Q  10 cttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactc 78  Q
    ||||| || ||||||||||||||||||||||||||||| |||||| | |||||||||| ||||||||||    
T  18793412 cttatgttgtactgttctattttatactgttttgtccagtacttattattttgcaaaccaaacacactc 18793480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 18685784 - 18685709
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||||||| | || ||||||||||| || ||||||| |||||| ||||| ||||||||||||| ||||||||    
T  18685784 ctgttctgtcttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 18685709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 30798631 - 30798703
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacaca 75  Q
    |||||||||||||| |||  ||||||||| |||||||||| |||||| ||||| ||||||||||||| |||||||    
T  30798631 ctgttctgtcttatgtta--ctgttctatcttatactgttctgtccagtacttgctgttttgcaaaccaaacaca 30798703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 32497863 - 32497788
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| || || |||| |||||| ||||||||||||||||||| ||||||||    
T  32497863 ctgttctgccttttgttgtactgttctatcttgtattgttctgtccagtacttactgttttgcaaaccaaacacac 32497788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 39461262 - 39461187
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| || || |||| |||||| ||||||||||||||||||| ||||||||    
T  39461262 ctgttctgccttgtgttgtactgttctatcttgtattgttatgtccagtacttactgttttgcaaaccaaacacac 39461187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 4641463 - 4641389
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||||| || ||||||||||| || ||||||| |||||| ||||| ||||||||||||  ||||||||    
T  4641463 tgttctgccttatgttgtactgttctatattttactgttctgtccagtacttgctgttttgcaaagcaaacacac 4641389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 17540662 - 17540588
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacaca 75  Q
    |||||||| ||| | || ||||||||||| |||||||||| | |||| ||||| ||||||||||||| |||||||    
T  17540662 ctgttctgccttgtgttgtactgttctatcttatactgttctatccagtacttgctgttttgcaaaccaaacaca 17540588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 37004024 - 37004086
Alignment:
Q  14 tattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||| ||||||||||| |||||||||| |||| | ||||| ||||||||||||| ||||||||    
T  37004024 tattgtactgttctatcttatactgttctgtctagtacttgctgttttgcaaaccaaacacac 37004086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 42365524 - 42365454
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaac 72  Q
    ||||||| ||| | || ||||||||||| ||||  |||||| |||||||||||||||||||||||| ||||    
T  42365524 tgttctgccttgtgttgtactgttctatcttatgttgttttttccaatacttactgttttgcaaaccaaac 42365454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 2086019 - 2085946
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacaca 75  Q
    ||||||| ||| | || ||||||||||| || ||||||| |||||| ||||| ||||||||||||| |||||||    
T  2086019 tgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacaca 2085946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 9717171 - 9717114
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||||| || ||||||| |||||| ||||| ||||||||||||| ||||||||    
T  9717171 tactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 9717114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 33366558 - 33366473
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactcataagatg 86  Q
    |||||||| ||| | || ||||||||||| || || |||| |||||| ||||| ||||||||||||| |||||||| |||| ||||    
T  33366558 ctgttctgacttgtgttgtactgttctatcttgtattgttctgtccagtacttgctgttttgcaaaccaaacacacccataggatg 33366473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 35114715 - 35114658
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||||| || ||||||| |||||| ||||| ||||||||||||| ||||||||    
T  35114715 tactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 35114658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 9733090 - 9733138
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaac 67  Q
    ||||||||||| |||||||||| |||||| ||||| |||||||||||||    
T  9733090 tactgttctatcttatactgttctgtccagtacttgctgttttgcaaac 9733138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 37308603 - 37308523
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactcataa 82  Q
    ||||||| ||| | || ||||||||||| || ||||||| |||||| |||||  |||||||||||| |||||||| |||||    
T  37308603 tgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgttgttttgcaaaccaaacacacccataa 37308523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 2645228 - 2645303
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||||| || ||||||||||| |||||||||| | || | |||||  |||||||||||| ||||||||    
T  2645228 ctgttctgccttatgttgtactgttctatcttatactgttctatcaagtacttgttgttttgcaaaccaaacacac 2645303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 5278976 - 5279051
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || || |||||||| || ||||||| |||| | ||||||||||||||||||| ||||||||    
T  5278976 ctgttctgccttgtgttgtattgttctatcttgtactgttctgtcaagtacttactgttttgcaaaccaaacacac 5279051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 13829367 - 13829316
Alignment:
Q  21 ctgttctattttatactgttttgtccaatacttactgttttgcaaactaaac 72  Q
    |||||||  ||| ||||||||||||||||| |||||||||||||||| ||||    
T  13829367 ctgttctgctttgtactgttttgtccaataattactgttttgcaaaccaaac 13829316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 34338758 - 34338683
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| || ||||||| |||||| |||||  |||||||||||| ||||||||    
T  34338758 ctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgttgttttgcaaaccaaacacac 34338683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 42706306 - 42706231
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||||||| | || || |||||||| || ||||||| |||| | | ||||||||||||||||| ||||||||    
T  42706306 ctgttctgtcttgtgttgtattgttctatcttgtactgttatgtcaagtgcttactgttttgcaaaccaaacacac 42706231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 44284564 - 44284505
Alignment:
Q  22 tgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactcata 81  Q
    |||||||| || ||||||| |||||| ||||| ||||||||||||| |||||||| ||||    
T  44284564 tgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacacccata 44284505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 16104221 - 16104147
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||| | || ||||||||||| || |||||||||||||| |||||  |||||||||||| ||| ||||    
T  16104221 tgttctgccttgtgttgtactgttctatcttgtactgttttgtccagtacttgttgttttgcaaaccaaatacac 16104147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 33889173 - 33889131
Alignment:
Q  34 tactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||    
T  33889173 tactgttctgtccagtacttactgttttgcaaaccaaacacac 33889131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 26418837 - 26418796
Alignment:
Q  35 actgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||| |||| ||||||||||||||||||||| ||||||||    
T  26418837 actgttctgtcaaatacttactgttttgcaaaccaaacacac 26418796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 27462961 - 27463014
Alignment:
Q  21 ctgttctattttatactgttttgtccaatacttactgttttgcaaactaaacac 74  Q
    ||||||| ||||  |||||||| |||||||||| ||||||||||||| ||||||    
T  27462961 ctgttctgttttgcactgttttatccaatacttgctgttttgcaaaccaaacac 27463014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 51387 - 51312
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||||||| |||||||||||||||| || ||||||| |||||| ||||| ||||||||||||| ||||||||    
T  51387 ctgttctgtcttgtattatactgttctatattgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 51312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 31513741 - 31513815
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||| | || ||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||    
T  31513741 tgttctgccttgtgttgtactgttctatcttgtactgttttgtccaatacttactgttttgcaaaccaaacacac 31513815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 34101455 - 34101381
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||| | || ||||||||||| ||||||||||||||||| |||||||| |||||||||| ||||||||    
T  34101455 tgttctgccttgtgttgtactgttctatcttatactgttttgtccagtacttacttttttgcaaaccaaacacac 34101381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 3251813 - 3251894
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactcataa 82  Q
    |||||||| ||| | || ||||||||||| ||||| |||| ||||| |||||||||||||||||||| |||||||| |||||    
T  3251813 ctgttctgccttgtgttgtactgttctatcttatattgttctgtccgatacttactgttttgcaaaccaaacacacccataa 3251894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 31732009 - 31731937
Alignment:
Q  4 ttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||| | || ||||||||||| ||||||| || |||||| ||||||||||||||||||| ||||||||    
T  31732009 ttctgtcttgtgttgtactgttctatcttatacttttctgtccagtacttactgttttgcaaaccaaacacac 31731937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 45446403 - 45446328
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| || ||||||| |||||| ||||||||||||||||||| ||||||||    
T  45446403 ctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaaacacac 45446328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 8673230 - 8673287
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||||||||    
T  8673230 tactgttctatcttgtactgttttgtccagtacttgctgttttgcaaaccaaacacac 8673287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 25478196 - 25478121
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || || |||||||| ||||||||||||||| | ||||||||||||| ||||| ||||||||    
T  25478196 ctgttctgccttgtgttgtattgttctatcttatactgttttgtcaagtacttactgttttacaaaccaaacacac 25478121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 32020158 - 32020233
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| || ||||||| |||||| ||||| ||||||||||||| ||||||||    
T  32020158 ctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 32020233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 32303742 - 32303817
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| || ||||||| |||||| ||||| ||||||||||||| ||||||||    
T  32303742 ctgttctgccttttgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 32303817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 41709725 - 41709650
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| || || |||| |||||| ||||||||||||||||||| ||||||||    
T  41709725 ctgttctgccttgtgttgtactgttctatcttgtattgttctgtccagtacttactgttttgcaaaccaaacacac 41709650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 7394971 - 7395045
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacaca 75  Q
    |||||||||||| | || ||||||||||| ||||| |||| |||| | ||| ||||||||||||||| |||||||    
T  7394971 ctgttctgtcttgtgttgtactgttctatcttatattgttctgtcaagtacctactgttttgcaaaccaaacaca 7395045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 13407093 - 13407167
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||| | || ||||||||||| || ||||||| |||||| |||||||||||||| |||| ||||||||    
T  13407093 tgttctgccttgtgttgtactgttctatattgtactgttctgtccagtacttactgttttgtaaaccaaacacac 13407167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 29563401 - 29563458
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||||| || ||||||| ||| |||||||| ||||||||||||| ||||||||    
T  29563401 tactgttctatcttgtactgttctgttcaatacttgctgttttgcaaaccaaacacac 29563458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 45113980 - 45113927
Alignment:
Q  25 tctattttatactgttttgtccaatacttactgttttgcaaactaaacacactc 78  Q
    ||||| || ||||||| |||||| ||||||||||||||||||| ||||||||||    
T  45113980 tctatcttgtactgttatgtccagtacttactgttttgcaaaccaaacacactc 45113927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 955094 - 955170
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactc 78  Q
    ||||||||||| | || ||||||||||| || ||||||| |||| | ||||| |||||||| |||| ||||||||||    
T  955094 tgttctgtcttgtgttgtactgttctatcttgtactgttctgtcaagtacttgctgttttgtaaaccaaacacactc 955170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 12753483 - 12753554
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacac 74  Q
    ||||||||||| | || || |||||||| || ||||||| |||||||||||| ||||||||||||| ||||||    
T  12753483 tgttctgtcttgtgttgtattgttctatcttgtactgttctgtccaatactt-ctgttttgcaaaccaaacac 12753554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 30543197 - 30543241
Alignment:
Q  34 tactgttttgtccaatacttactgttttgcaaactaaacacactc 78  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||    
T  30543197 tactgttctgtccaatacttactattttgcaaaccaaacacactc 30543241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 6386524 - 6386449
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| || ||||||| |||||| |||||  |||||||||||| ||||||||    
T  6386524 ctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgttgttttgcaaaccaaacacac 6386449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 17805605 - 17805563
Alignment:
Q  34 tactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||||||| | ||||||||||||||||||| ||||||||    
T  17805605 tactgttttgtcaagtacttactgttttgcaaaccaaacacac 17805563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 34063067 - 34063001
Alignment:
Q  10 cttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||| || ||||||||||| || ||||||| |||||| ||||| | ||||||||||| ||||||||    
T  34063067 cttatgttgtactgttctatcttgtactgttctgtccagtacttgcggttttgcaaaccaaacacac 34063001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21272661 - 21272588
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacac 74  Q
    |||||||| ||| | || ||||| ||||| || || |||| |||||||||||| ||||||||||||| ||||||    
T  21272661 ctgttctgccttgtgttgtactgatctatcttgtattgttctgtccaatacttgctgttttgcaaaccaaacac 21272588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 15001395 - 15001339
Alignment:
Q  21 ctgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacact 77  Q
    ||||||| | || ||||||| |||||| ||||||||||||||||||| |||| ||||    
T  15001395 ctgttctgtcttgtactgttctgtccagtacttactgttttgcaaaccaaacgcact 15001339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 41790611 - 41790685
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||| | || |||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||||    
T  41790611 tgttctgccttgtgttgtactgttctattttatactgttctgtccagtacttactgttttgtaaaccaaacacac 41790685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 7523119 - 7523044
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| || ||||||| |||||||||||| ||||||||||||| ||||||||    
T  7523119 ctgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttcctgttttgcaaaccaaacacac 7523044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 20119699 - 20119644
Alignment:
Q  21 ctgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||| || ||||||| |||||||||||||||||||||||||| ||||||||    
T  20119699 ctgttctatcttgtactgttctgtccaatacttactgttttgcaaaccaaacacac 20119644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 21739304 - 21739379
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||||||| | || ||||||||||| ||||| |||| |||||| ||||| ||||||||||||| ||||||||    
T  21739304 ctgttctgtcttgtgttgtactgttctatcttatattgttatgtccagtacttgctgttttgcaaaccaaacacac 21739379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 548295 - 548221
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||||| || ||||||||||| || ||||||| |||||| |||||| |||||||||||| ||||||||    
T  548295 tgttctgccttatgttgtactgttctatcttgtactgttctgtccagtacttaatgttttgcaaaccaaacacac 548221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 34794834 - 34794769
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaac 67  Q
    ||||||| ||| | || ||||||||||| || ||||||| ||||||||||||||||||||||||||    
T  34794834 tgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttactgttttgcaaac 34794769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 32528663 - 32528588
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||||| || ||||||||||| || ||||||| |||||| |||||||| |||||||||  ||||||||    
T  32528663 ctgttctgccttatgttgtactgttctatcttgtactgttctgtccagtacttactattttgcaaatcaaacacac 32528588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 37148741 - 37148792
Alignment:
Q  21 ctgttctattttatactgttttgtccaatacttactgttttgcaaactaaac 72  Q
    ||||||| | ||||||||||||||||| ||||||||||||||||||| ||||    
T  37148741 ctgttctgtattatactgttttgtccagtacttactgttttgcaaaccaaac 37148792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 2351627 - 2351553
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||| | || ||||||||||| || ||||||| |||||| ||||| ||||||||||||| ||||||||    
T  2351627 tgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 2351553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 35701207 - 35701150
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||||| || ||||||| |||||| ||||| ||||||||||||| ||||||||    
T  35701207 tactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 35701150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 4818307 - 4818363
Alignment:
Q  20 actgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||||| || ||||||| |||||| ||||| ||||||||||||| ||||||||    
T  4818307 actgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 4818363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 8136769 - 8136706
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactcataa 82  Q
    ||||||||||| || |||| || |||||| ||||||||||||| ||||| |||||||| |||||    
T  8136769 tactgttctatcttgtactattctgtccagtacttactgttttacaaaccaaacacacccataa 8136706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 11963271 - 11963216
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacac 74  Q
    ||||||||||| || ||||||| |||||| ||||| ||||||||||||| ||||||    
T  11963271 tactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacac 11963216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 24181790 - 24181832
Alignment:
Q  34 tactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||    
T  24181790 tactgttctgtccagtacttactgttttgcaaaccaaacacac 24181832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 21579976 - 21579902
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||| | || ||||||||||| |||||||||| |||||| ||||||||||||||||||| ||||||||    
T  21579976 tgttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttactgttttgcaaaccaaacacac 21579902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 49152234 - 49152309
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| |||||||||| |||||| ||||| ||||||||||||| ||||||||    
T  49152234 ctgttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttgctgttttgcaaaccaaacacac 49152309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 12600837 - 12600762
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| || ||||||| |||||| ||||| ||||||||||||| ||||||||    
T  12600837 ctgttctgacttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 12600762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 24002289 - 24002214
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| || ||||||| |||||| ||||| ||||||||||||| ||||||||    
T  24002289 ctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 24002214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 56154572 - 56154497
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| |||||||||| |||||| |||||  |||||||||||| ||||||||    
T  56154572 ctgttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttgttgttttgcaaaccaaacacac 56154497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 33177168 - 33177242
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||||| | || ||||||||||| |||||||||| |||| | ||||||| ||||||||||| || |||||    
T  33177168 tgttctgtcttgtgttgtactgttctatcttatactgttctgtcaagtacttaccgttttgcaaaccaagcacac 33177242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 37865703 - 37865629
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||| | || ||||||||||| || ||||||| |||||  ||||||||||||||||||| ||||||||    
T  37865703 tgttctgccttgtgttgtactgttctatcttgtactgttatgtcccgtacttactgttttgcaaaccaaacacac 37865629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 52319276 - 52319202
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||| | || ||||||||||| || ||||||| |||||| ||||| ||||||||||||| ||||||||    
T  52319276 tgttctgccttgtgttgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaaacacac 52319202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 38520497 - 38520440
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||||| |||||||||| |||||||||||   |||||||||||| ||||||||    
T  38520497 tactgttctatcttatactgttctgtccaatactagttgttttgcaaaccaaacacac 38520440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 46680643 - 46680700
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||||| || ||||||| |||||| |||||||| |||||||||| ||||||||    
T  46680643 tactgttctatcttgtactgttctgtccagtacttactattttgcaaaccaaacacac 46680700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 37931839 - 37931791
Alignment:
Q  34 tactgttttgtccaatacttactgttttgcaaactaaacacactcataa 82  Q
    ||||||| |||||| ||||||||||||||||||| ||||||| ||||||    
T  37931839 tactgttatgtccagtacttactgttttgcaaaccaaacacagtcataa 37931791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 21202671 - 21202616
Alignment:
Q  21 ctgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| | || |||||||||||||| |||||||| |||||||||| ||||||||    
T  21202671 ctgttctgtcttgtactgttttgtccagtacttactattttgcaaaccaaacacac 21202616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 23521831 - 23521756
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||| ||| || ||||||| |||||| ||||| ||||||||||||| ||||||||    
T  23521831 ctgttctgccttgtgttgtactgttttatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 23521756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 29785672 - 29785747
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| |||||||||| ||| || |||||| |||||||||||  ||||||||    
T  29785672 ctgttctgccttgtgttgtactgttctatcttatactgttctgttcagtacttattgttttgcaaatcaaacacac 29785747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 43641050 - 43640975
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| || ||||||| |||| | ||||| ||||||||||||| ||||||||    
T  43641050 ctgttctgccttgtgttgtactgttctatcttgtactgttctgtctagtacttgctgttttgcaaaccaaacacac 43640975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 2786883 - 2786841
Alignment:
Q  34 tactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||    
T  2786883 tactgttatgtccagtacttactgttttgcaaaccaaacacac 2786841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 20694306 - 20694252
Alignment:
Q  22 tgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| || ||||||| | |||| ||||||||||||||||||| ||||||||    
T  20694306 tgttctatcttgtactgttctatccattacttactgttttgcaaaccaaacacac 20694252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 20802667 - 20802741
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||| | || ||||||||||| || ||||||| ||| || ||||| ||||||||||||| ||||||||    
T  20802667 tgttctgccttgtgttgtactgttctatcttgtactgttctgttcagtacttgctgttttgcaaaccaaacacac 20802741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 30942707 - 30942674
Alignment:
Q  34 tactgttttgtccaatacttactgttttgcaaac 67  Q
    |||||||||||||||||||||||||||| |||||    
T  30942707 tactgttttgtccaatacttactgttttacaaac 30942674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 42869924 - 42869859
Alignment:
Q  10 cttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacaca 75  Q
    ||||| || ||||||||||| || ||||||| |||| | ||||| ||||||||||||| |||||||    
T  42869924 cttatgttgtactgttctatcttgtactgttctgtcgagtacttgctgttttgcaaaccaaacaca 42869859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 13110259 - 13110207
Alignment:
Q  22 tgttctattttatactgttttgtccaatacttactgttttgcaaactaaacac 74  Q
    |||||||| || || |||||| |||| ||||||||||||||||||| ||||||    
T  13110259 tgttctatcttgtattgttttatccactacttactgttttgcaaaccaaacac 13110207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 3892169 - 3892246
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactc 78  Q
    |||||||| ||| | || ||||||||||| |||||||||| |||||| ||||||||||||||||||| ||| ||||||    
T  3892169 ctgttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttactgttttgcaaaccaaatacactc 3892246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 21784822 - 21784749
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacaca 75  Q
    ||||||| ||| | || ||||||||||| || |||||||||||||| ||||||||||||||||||| |||||||    
T  21784822 tgttctgccttgtgttgtactgttctatcttgtactgttttgtccagtacttactgttttgcaaaccaaacaca 21784749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 43189404 - 43189461
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||||| |||||||||| |||||| ||||||||||||||||||| ||||||||    
T  43189404 tactgttctatcttatactgttatgtccagtacttactgttttgcaaaccaaacacac 43189461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 11322028 - 11322103
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| || ||||||| ||||| |||||||||||||||||||| ||||||||    
T  11322028 ctgttctgccttgtgttgtactgttctatcttgtactgttctgtccgatacttactgttttgcaaaccaaacacac 11322103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 36769712 - 36769787
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| || ||||||| |||||| ||||||||||||||||||| ||||||||    
T  36769712 ctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaaacacac 36769787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 30849390 - 30849464
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||||| | || ||||||||||| || ||||||| |||| | ||||||||||||||||||| ||||||||    
T  30849390 tgttctgtcttgtgttgtactgttctatcttgtactgttctgtcaagtacttactgttttgcaaaccaaacacac 30849464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 10932718 - 10932775
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||||| || ||||||| |||||| ||||||||||||||||||| ||||||||    
T  10932718 tactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaaacacac 10932775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 32873913 - 32873988
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacact 77  Q
    ||||||| ||| | || ||||||||||| || ||||||| |||||| ||||| ||||||||||||| |||||||||    
T  32873913 tgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacact 32873988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 46408847 - 46408764
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactcataagat 85  Q
    ||||||| ||| | || ||||||||||| || ||||||| | |||||||||| ||||||||||||| |||||||| || |||||    
T  46408847 tgttctgccttgtgttgtactgttctatcttgtactgttctatccaatacttgctgttttgcaaaccaaacacacccaaaagat 46408764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 18386456 - 18386406
Alignment:
Q  22 tgttctattttatactgttttgtccaatacttactgttttgcaaactaaac 72  Q
    ||||||||||| ||| |||||||||||||||| ||||||||||||| ||||    
T  18386456 tgttctattttgtaccgttttgtccaatacttgctgttttgcaaaccaaac 18386406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 30599152 - 30599226
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||| | || ||||||||||| || ||||||| |||||| |||||||||||||| |||| ||||||||    
T  30599152 tgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgtaaaccaaacacac 30599226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 46633648 - 46633574
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||| | || ||||||||||| || |||| || |||||||||||| ||||||||||||| ||||||||    
T  46633648 tgttctgccttgtgttgtactgttctatcttgtactattatgtccaatacttgctgttttgcaaaccaaacacac 46633574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 11822163 - 11822118
Alignment:
Q  22 tgttctattttatactgttttgtccaatacttactgttttgcaaac 67  Q
    ||||||||||||||||||| ||| || |||||||||||||||||||    
T  11822163 tgttctattttatactgttatgttcagtacttactgttttgcaaac 11822118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18470636 - 18470563
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacac 74  Q
    |||||||| ||| | || ||||||||||| || ||||||| |||||| ||||| ||||||||||||| ||||||    
T  18470636 ctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacac 18470563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 47316844 - 47316901
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||||| || ||| ||| |||||| ||||||||||||||||||| ||||||||    
T  47316844 tactgttctatcttgtaccgttctgtccagtacttactgttttgcaaaccaaacacac 47316901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 26371953 - 26372017
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaa 66  Q
    |||||||| |||| || ||||||||||| || ||||||| |||||| ||||||||||||| ||||    
T  26371953 tgttctgttttatgttgtactgttctatcttgtactgttatgtccagtacttactgtttttcaaa 26372017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 41211365 - 41211417
Alignment:
Q  22 tgttctattttatactgttttgtccaatacttactgttttgcaaactaaacac 74  Q
    |||||||| || |||||||||||||| ||||| ||||||||||||| ||||||    
T  41211365 tgttctatcttgtactgttttgtccagtacttgctgttttgcaaaccaaacac 41211417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 47442771 - 47442731
Alignment:
Q  34 tactgttttgtccaatacttactgttttgcaaactaaacac 74  Q
    |||||||||||||||||||| ||||||||||||| ||||||    
T  47442771 tactgttttgtccaatacttgctgttttgcaaaccaaacac 47442731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 3922846 - 3922921
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||| ||||| || ||||||| |||||| ||||| ||||||||||||| ||||||||    
T  3922846 ctgttctgccttgtgttgtactggtctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 3922921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 26994368 - 26994443
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || ||||||||||| || | ||||| |||||| ||||| ||||||||||||| ||||||||    
T  26994368 ctgttctgccttgtgttgtactgttctatcttgtcctgttctgtccagtactttctgttttgcaaaccaaacacac 26994443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 16963031 - 16962989
Alignment:
Q  34 tactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||    
T  16963031 tactgttctgtccagtacttactgttttgcaaaccaaacacac 16962989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 22631652 - 22631610
Alignment:
Q  34 tactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||    
T  22631652 tactgttctgtccaatacttattgttttgcaaacgaaacacac 22631610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 34117392 - 34117350
Alignment:
Q  34 tactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||    
T  34117392 tactgttatgtccagtacttactgttttgcaaaccaaacacac 34117350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 40753089 - 40753047
Alignment:
Q  34 tactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||    
T  40753089 tactgttctgtccagtacttactgttttgcaaaccaaacacac 40753047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12982255 - 12982175
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactcata 81  Q
    |||||||| ||| | || ||||||||||| || ||||||| | |||| ||||| || |||||||||| |||||||| ||||    
T  12982255 ctgttctgccttgtgttgtactgttctatcttgtactgttctctccagtacttgctcttttgcaaaccaaacacacccata 12982175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 26910580 - 26910624
Alignment:
Q  32 tatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||| |||| |||||| ||||||||||||||||||| ||||||||    
T  26910580 tatattgttatgtccagtacttactgttttgcaaaccaaacacac 26910624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 15119 - 15047
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacac 74  Q
    ||||||| ||||| || |||||||||||||| ||||||| |||||  ||||||||||||||||||| ||||||    
T  15119 tgttctgccttatgttgtactgttctattttgtactgttctgtccggtacttactgttttgcaaaccaaacac 15047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 101897 - 101822
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||  |||||||| ||||||||||| |||||||||| |||||  ||||| ||||||||||||| ||||||||    
T  101897 ctgttctaccttatattgtactgttctatcttatactgttctgtccggtacttgctgttttgcaaaccaaacacac 101822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 2614843 - 2614769
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||| | || ||||||||||| ||||||||||||||||| |||||  |||||||||||| ||||||||    
T  2614843 tgttctgccttgtgttgtactgttctatcttatactgttttgtccagtacttgttgttttgcaaaccaaacacac 2614769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 11212205 - 11212131
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacaca 75  Q
    |||||||| ||| | || ||||||||||| || ||||||| |||||||||||| ||||||||||||| |||||||    
T  11212205 ctgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttgctgttttgcaaaccaaacaca 11212131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 15277119 - 15277193
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||||| || ||||||||||| || ||||||| |||||| ||||| ||||||||||||| ||||||||    
T  15277119 tgttctgccttatgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 15277193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 28502406 - 28502332
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||| | || ||||||||||| || ||||||| |||||| ||||||||||||||||||| ||||||||    
T  28502406 tgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaaacacac 28502332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 29814812 - 29814738
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||| | || ||||||||||| || ||||||| |||||| ||||||||||||||||||| ||||||||    
T  29814812 tgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaaacacac 29814738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 34684199 - 34684241
Alignment:
Q  34 tactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  34684199 tactgttttgtccaatacttactgttttgcaaaccaaacacac 34684241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 24203293 - 24203228
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactcataaga 84  Q
    |||||||||||  | ||||||| |||||||||||| ||||||||||||| ||||||||||| ||||    
T  24203293 tactgttctatcatgtactgttctgtccaatacttgctgttttgcaaaccaaacacactcaaaaga 24203228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 3932988 - 3933063
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||| |||||| | || ||||||||||| |||||||||||| ||||||||||  | |||||||||| ||||||||    
T  3932988 ctgttttgtcttgtgttgtactgttctatcttatactgttttatccaatacttgttattttgcaaaccaaacacac 3933063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 3259625 - 3259551
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||| ||| | || ||||||||||| || ||||||| |||||||| ||| ||||||||||||| ||||||||    
T  3259625 tgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatccttgctgttttgcaaaccaaacacac 3259551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 11613975 - 11614032
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||||||  | ||||||| |||||||||||| ||||||||||||| ||||||||    
T  11613975 tactgttctatcgtgtactgttctgtccaatacttgctgttttgcaaaccaaacacac 11614032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 11382040 - 11381960
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactcataa 82  Q
    ||||||| ||| | || ||||||||||| || ||||||| ||| || |||||||| |||||||||| |||||||| |||||    
T  11382040 tgttctgccttgtgttgtactgttctatcttgtactgttctgttcagtacttactattttgcaaaccaaacacacccataa 11381960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 17867782 - 17867706
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactc 78  Q
    ||||||| ||| | || ||||||||||| || ||||||| |||||| ||||| ||||||||||||| |||| |||||    
T  17867782 tgttctgccttgtgttgtactgttctatgttgtactgttctgtccagtacttgctgttttgcaaaccaaacgcactc 17867706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 17877565 - 17877489
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactc 78  Q
    ||||||| ||| | || ||||||||||| || ||||||| |||||| ||||| ||||||||||||| |||| |||||    
T  17877565 tgttctgccttgtgttgtactgttctatgttgtactgttctgtccagtacttgctgttttgcaaaccaaacgcactc 17877489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 18057448 - 18057396
Alignment:
Q  21 ctgttctattttatactgttttgtccaatacttactgttttgcaaactaaaca 73  Q
    ||||||||| || ||||||| | |||||||||||||||||||||||| |||||    
T  18057448 ctgttctatcttttactgttctatccaatacttactgttttgcaaaccaaaca 18057396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 15277479 - 15277522
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttg 62  Q
    ||||||||||| |||||||||| |||||| ||||||||||||||    
T  15277479 tactgttctatcttatactgttctgtccagtacttactgttttg 15277522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 32805426 - 32805351
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || || |||||||| || ||||||| |||||| ||||| ||||||||||||| ||||||||    
T  32805426 ctgttctgccttgtgttgtattgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaaacacac 32805351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 17443190 - 17443136
Alignment:
Q  22 tgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| || ||||||| ||||||||| || ||||||||||||| ||||||||    
T  17443190 tgttctatcttgtactgttctgtccaatatttgctgttttgcaaaccaaacacac 17443136  T

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Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 23636139 - 23636085
Alignment:
Q  34 tactgttttgtccaatacttactgttttgcaaactaaacacactcataagatgtt 88  Q
    ||||||| | |||| || |||||||||||||||| ||||||||| ||||||||||    
T  23636139 tactgttatatccagtatttactgttttgcaaaccaaacacactaataagatgtt 23636085  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 11279069 - 11279012
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||||| || ||||||| | |||| ||||| ||||||||||||| ||||||||    
T  11279069 tactgttctatcttgtactgttctatccagtacttgctgttttgcaaaccaaacacac 11279012  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 32410033 - 32410098
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaa 66  Q
    |||||||| ||| | || ||||||||||| |||||||||| |||| | || |||||||||||||||    
T  32410033 ctgttctgccttgtgttgtactgttctatcttatactgttctgtctagtatttactgttttgcaaa 32410098  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 4494280 - 4494352
Alignment:
Q  2 tgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacac 74  Q
    ||||||| ||||| || | |||||||||  | ||||||| |||| | ||||||||||||||||||| ||||||    
T  4494280 tgttctgccttatgttgtgctgttctatcctgtactgttctgtctagtacttactgttttgcaaaccaaacac 4494352  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 10959916 - 10959868
Alignment:
Q  34 tactgttttgtccaatacttactgttttgcaaactaaacacactcataa 82  Q
    ||||||| | |||| ||||||||||||||||||| |||||||| |||||    
T  10959916 tactgttctatccagtacttactgttttgcaaaccaaacacacccataa 10959868  T

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Target: scaffold0208 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 2486 - 2561
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    |||||||| ||| | || |||| |||||| || ||||||| |||||| ||||| ||||||||||||| ||||||||    
T  2486 ctgttctgccttgtgttgtactattctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 2561  T

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Target: scaffold0169 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 12702 - 12759
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||||| || ||||||| | |||| ||||| ||||||||||||| ||||||||    
T  12702 tactgttctatcttgtactgttctatccagtacttgctgttttgcaaaccaaacacac 12759  T

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Target: scaffold0169; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 18220 - 18277
Alignment:
Q  19 tactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacac 76  Q
    ||||||||||| || ||||||| | |||| ||||| ||||||||||||| ||||||||    
T  18220 tactgttctatcttgtactgttctatccagtacttgctgttttgcaaaccaaacacac 18277  T

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Target: scaffold0054 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23525 - 23444
Alignment:
Q  1 ctgttctgtcttatattatactgttctattttatactgttttgtccaatacttactgttttgcaaactaaacacactcataa 82  Q
    |||||||| ||| | || || |||||||| || ||||||| |||||| || || ||||||||||||| |||||||| |||||    
T  23525 ctgttctgccttgtgttgtattgttctatcttgtactgttctgtccagtatttgctgttttgcaaaccaaacacacccataa 23444  T

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