View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4427_low_7 (Length: 442)
Name: NF4427_low_7
Description: NF4427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4427_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 395; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 11 - 429
Target Start/End: Original strand, 46046650 - 46047068
Alignment:
| Q |
11 |
cataggagaaacgaaaaacatagatatatcaacaaagatatagggttcagagatggaggtgctccaataccagctaggtcggtcagctggtaccaaccta |
110 |
Q |
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| T |
46046650 |
cataggagaaacgaaaaacatagatatatcaacaaagatatagggttcagagatggaggtgctccaataccagctaggtcggtcagctggtaccaaccta |
46046749 |
T |
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| Q |
111 |
catgatgcaaatgtgagaagcatcggcaacaccaaattgtgggttgggaggagcatgaactctccatctctgtactctaattataattattatgagacat |
210 |
Q |
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| T |
46046750 |
catgatgcaaatgtgagaagcatcggcaacaccaaattgtgggttgggaggagcgttaactctccatctctgtactctaattataattattatgagacat |
46046849 |
T |
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| Q |
211 |
cgcgagaacgttctgtggtgaaaaattataagacgctgcaaaaacgttctgtggtgaaaaagaagaagagtatgtcatggtggaatgaccctgagagaaa |
310 |
Q |
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| T |
46046850 |
cgcgagaacgttctgtggtgaaaaattatgagacgctgcgagaacgttctgtggtgaaaaagaagaagagcatgtcatggtggaatgaccctgagagaaa |
46046949 |
T |
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| Q |
311 |
aagaaagaggagagtggccagatacaagttttatgggaccgaaggtaagctgaaacgttctttgaagaaagggtttcaatggttgaaggtcaaatgcatc |
410 |
Q |
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| T |
46046950 |
aagaaagaggagagtggccagatacaagttttatgggaccgaaggtaagctgaaacgttctttgaagaaagggtttcaatggttgaaggtcaaatgcatc |
46047049 |
T |
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| Q |
411 |
aaaatctcagcaagtttct |
429 |
Q |
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| T |
46047050 |
aaaatctcagcaagtttct |
46047068 |
T |
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