View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4428-Insertion-1 (Length: 936)
Name: NF4428-Insertion-1
Description: NF4428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4428-Insertion-1 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 778; Significance: 0; HSPs: 14)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 778; E-Value: 0
Query Start/End: Original strand, 7 - 863
Target Start/End: Complemental strand, 35322920 - 35322066
Alignment:
| Q |
7 |
aaaatgccgcacctaacaaaaactcagctaggggtttcgaagtgattgataccattaaaaccagtgttgaagcttcatgcaatgccattgtatcttgtgc |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
35322920 |
aaaatgccgcacctaacaaaaactcagctaggggtttcgaagtgattgataccattaaaactagtgttgaagcttcatgcaatgccactgtatcttgtgc |
35322821 |
T |
|
| Q |
107 |
tgatattctagcacttgcagcaagagatggtgtatttctggtgagtggtccattactccattccaatttctttcttctgatgcaaaacatattagaaaaa |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
35322820 |
tgatattctagcacttgcagcaagagatggagtatttctggtgagtggtccattactccatgccaattactttcttctgatgcaaaacatattagaaaaa |
35322721 |
T |
|
| Q |
207 |
attatactccgtctcgctgagagaaacatgagttacactttctcccatattaatagttttattttttatttctagcttggaggaccaacatgggtagtac |
306 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
35322720 |
attatactccgtctagctgagagaaacttgagttacactttctcccatattaatagttttattttttatttgtagcttggaggaccaacatgggtagtac |
35322621 |
T |
|
| Q |
307 |
cacttggaagaagagatgcaagaacagcaagccaaagtgcagcaaatagtcaaatcccttcaccattttctgacctttccactctcaccaaaatgtttac |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35322620 |
cacttggaagaagagatgcaagaacagcaagccaaagtgcagcaaatagtcaaatcccttcaccattttctgacctttccactctcaccaaaatgtttac |
35322521 |
T |
|
| Q |
407 |
agacaagggtttaactgcaagtgacctcacagtactttctggtgcacacaccataggccaaggagagtgccaatttttcagaaatcgcatatacaatgaa |
506 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35322520 |
agacaagggtctaactgcaagtgacctcacagtactttctggtgcacacaccataggccaaggagagtgccaatttttcagaaatcgcatatacaatgaa |
35322421 |
T |
|
| Q |
507 |
accaacattgacacaaactttgcaaccttaaggaaatcaaattgtcctctttctggtggtgacactaatttagcacctcttgatactcacactccaacaa |
606 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| |
|
|
| T |
35322420 |
accaacattgacacaaactttgcaaccttaaggaaattaaattgtcctctttctggtggtgacaccaatttagcacctcttgacactctcactccaacaa |
35322321 |
T |
|
| Q |
607 |
gttttgacaacaattactataaaaaccttgttgcaagcaaaggtcttttccattctgatcaagctcttttcaataatgggtctcaagataatttggttag |
706 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35322320 |
attttgacaacaattactataaaaatcttgttgcaagcaaaggtcttttccattctgatcaagctcttttcaataatgggtctcaagataatttggttag |
35322221 |
T |
|
| Q |
707 |
gagttatagtatcaatggtgctacttttagaagagactttgctgttgctatggtgaaactgagtaaaattaatcctctaacagggactaatggggagatt |
806 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
35322220 |
gagttatagtaccaatggtgctacttttagaagagactttgctgttgctatggtgaaactgagtaaaattaatcctctaactgggactaatggggagatt |
35322121 |
T |
|
| Q |
807 |
agaaagaattgtaggcttgtgaattgatcttgaatattggagggcttataagcaatt |
863 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
35322120 |
agaaagaattgtaggcttgtgaattgatcttga--attggagggcttataagcaatt |
35322066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 746; E-Value: 0
Query Start/End: Original strand, 7 - 867
Target Start/End: Complemental strand, 35307919 - 35307061
Alignment:
| Q |
7 |
aaaatgccgcacctaacaaaaactcagctaggggtttcgaagtgattgataccattaaaaccagtgttgaagcttcatgcaatgccattgtatcttgtgc |
106 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
35307919 |
aaaatgccgcacctaacaaaaattcagctaggggtttcgaagtgattgacaccattaaaaccagtgttgaagcttcttgcaatgccactgtatcttgtgc |
35307820 |
T |
|
| Q |
107 |
tgatattctagcacttgcagcaagagatggtgtatttctggtgagtggtccattactccattccaatttctttcttctgatgcaaaacatattagaaaaa |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35307819 |
tgatattctagcacttgcagcaagagatggagtatttctggtgagtggtccattactccattccaatttctttcttctgatgcaaaacatattagaaaaa |
35307720 |
T |
|
| Q |
207 |
attatactccgtctcgctgagagaaacatgagttacactttctcccatattaatagttttattttttatttctagcttggaggaccaacatgggtagtac |
306 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
35307719 |
attatactccatctcgctgagagaaacttgagttacactttcacccatattaatagttttattttttatttgtagcttggaggaccaacatgggtagtac |
35307620 |
T |
|
| Q |
307 |
cacttggaagaagagatgcaagaacagcaagccaaagtgcagcaaatagtcaaatcccttcaccattttctgacctttccactctcaccaaaatgtttac |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| | |
|
|
| T |
35307619 |
cacttggaagaagagatgcaagaacagcaagccaaagtgcagcaaatagtcaaatcccttcaccattttctgacctttccactctcactacaatgttttc |
35307520 |
T |
|
| Q |
407 |
agacaagggtttaactgcaagtgacctcacagtactttctggtgcacacaccataggccaaggagagtgccaatttttcagaaatcgcatatacaatgaa |
506 |
Q |
| |
|
|| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35307519 |
agccaagggtctaactgcaagtgacctcacagtactttctggtgcacacaccataggccaaggagagtgccaatttttcagaaatcgcatatacaatgaa |
35307420 |
T |
|
| Q |
507 |
accaacattgacacaaactttgcaaccttaaggaaatcaaattgtcctctttctggtggtgacactaatttagcacctcttgatactcacactccaacaa |
606 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||| |
|
|
| T |
35307419 |
accaacattgacacaaactttgcaaccttaaggaaatcaaattgtcctctttctggtggtgacaccaatttagcaccacttgatactctcactccaacaa |
35307320 |
T |
|
| Q |
607 |
gttttgacaacaattactataaaaaccttgttgcaagcaaaggtcttttccattctgatcaagctcttttcaataatgggtctcaagataatttggttag |
706 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35307319 |
gttttgataacaattactataaaaaccttgttgcaagcaaaggtcttttccattctgatcaagctcttttcaataatgggtctcaagataatttggttag |
35307220 |
T |
|
| Q |
707 |
gagttatagtatcaatggtgctacttttagaagagactttgctgttgctatggtgaaactgagtaaaattaatcctctaacagggactaatggggagatt |
806 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
35307219 |
gagttatagtaccaatggtgctactttttctagagactttgccgttgctatggtgaaactgagtaaaattagtcctctaactgggactaatggggagatt |
35307120 |
T |
|
| Q |
807 |
agaaagaattgtaggcttgtgaattgatcttgaatattggagggcttataagcaattaaat |
867 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
35307119 |
agaaagaattgcaggcttgtgaattgatcttga--attggagggcttataagcaattaaat |
35307061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 274 - 867
Target Start/End: Complemental strand, 35311998 - 35311402
Alignment:
| Q |
274 |
atttctagcttggaggaccaacatgggtagtaccacttggaagaagagatgcaagaacagcaagccaaagtgcagcaaatagtcaaatcccttcaccatt |
373 |
Q |
| |
|
|||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||| |
|
|
| T |
35311998 |
atttgtagcttggaggaccctcatggacagtaccacttggaagaagagatgcaagaacagcaaatcaaagtgcagcaaatagccaaatccctagaccatc |
35311899 |
T |
|
| Q |
374 |
ttctgacctttccactctcaccaaaatgtttacagacaagggtttaactgcaagtgacctcacagtactttctggtgcacacaccataggccaaggagag |
473 |
Q |
| |
|
| | |||| ||| ||||| | ||||||| || ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35311898 |
ctttaacctaaccagactcactacaatgtttttagccaagggtctaactgcaagtgatctcacagtactttctggtgcacacaccataggccaaggagag |
35311799 |
T |
|
| Q |
474 |
tgccaatttttcagaaatcgcatatacaatgaaaccaacattgacacaaactttgcaaccttaaggaaatcaaattgtcctctttctggtgg---tgaca |
570 |
Q |
| |
|
|| | ||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || ||| || ||||| ||| ||||| |
|
|
| T |
35311798 |
tgtcgattgttcagaactcgcatatacaatgaaaccaacattgacacaaacttcgcaaccttaagaaaatccaactgttctttttctagtgacaatgaca |
35311699 |
T |
|
| Q |
571 |
ctaatttagcacctcttgatactcacactccaacaagttttgacaacaattactataaaaaccttgttgcaagcaaaggtcttttccattctgatcaagc |
670 |
Q |
| |
|
| ||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
35311698 |
ccaatttagcaccacttgatactctcactccaacaagttttgacaacaattattataaaaaccttgttgcaagcaaaggtctattccattctgatcaagt |
35311599 |
T |
|
| Q |
671 |
tcttttcaataatgggtctcaagataatttggttaggagttatagtatcaatggtgctacttttagaagagactttgctgttgctatggtgaaactgagt |
770 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||| | ||||||||||| ||||||||||||||||||| |
|
|
| T |
35311598 |
ccttttcaataatgggtctcaagataatttggttaggagttatagtaccaatgaggctgctttttctacagactttgctgctgctatggtgaaactgagt |
35311499 |
T |
|
| Q |
771 |
aaaattaatcctctaacagggactaatggggagattagaaagaattgtaggcttgtgaattgatcttgaatattggagggcttataagcaattaaat |
867 |
Q |
| |
|
||||| | |||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
35311498 |
aaaatcagtcctctcactgggactaatggggagatcagaaagaattgtaggcttgtgaattgatattgaatattggagggcttataagcaattaaat |
35311402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 279 - 829
Target Start/End: Complemental strand, 35289849 - 35289296
Alignment:
| Q |
279 |
tagcttggaggaccaacatgggtagtaccacttggaagaagagatgcaagaacagcaagccaaagtgcagcaaatagtcaaatcccttcaccattttctg |
378 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || ||||| ||||| |
|
|
| T |
35289849 |
tagcttggaggtccttcatgggtagtaccacttggaagaagagatgcaagaacagcaagtcaaagtgcagcaaatagccaaattccaggaccatcttctg |
35289750 |
T |
|
| Q |
379 |
acctttccactctcaccaaaatgtttacagacaagggtttaactgcaagtgacctcacagtactttctggtgcacacaccataggccaaggagagtgcca |
478 |
Q |
| |
|
|||| ||||| ||||| | ||||||| | |||| ||| |||| || |||||| || || ||||||||||||||||||||||| |||| ||| || || |
|
|
| T |
35289749 |
acctatccacactcactaccatgtttagaaacaaaggtctaacattaaatgaccttactgtcctttctggtgcacacaccataggtcaagcagaatgtca |
35289650 |
T |
|
| Q |
479 |
atttttcagaaatcgcatatacaatgaaaccaacattgacacaaactttgcaaccttaaggaaatcaaattgtcctctttctggtggtgacactaattta |
578 |
Q |
| |
|
||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
35289649 |
atttttcagaactcgtatatacaacgaaaccaacattgacacaaactttgcaaccttaagaaaatcaaattgtcctacttctggtggtgacataaatttg |
35289550 |
T |
|
| Q |
579 |
gcacctcttgatactcacactccaacaagttttgacaacaattactataaaaaccttgttgcaagcaaaggtcttttccattctgatcaagctcttttca |
678 |
Q |
| |
|
|||||||||||| || | ||||| | ||||||||||||||||||||| |||||||||| | ||||| ||| | |||||||||||||||||||||| |
|
|
| T |
35289549 |
gcacctcttgattctgtctctccagttacttttgacaacaattactataatgaccttgttgctaataaaggacttcttcattctgatcaagctcttttca |
35289450 |
T |
|
| Q |
679 |
a---taatgggtctcaagataatttggttaggagttatagtatcaatggtgctacttttagaagagactttgctgttgctatggtgaaactgagtaaaat |
775 |
Q |
| |
|
| | ||| ||||||| | ||||||||||| |||||||| ||| | | |||||| |||||||||||| | |||||||||||| |||||| ||| |
|
|
| T |
35289449 |
atggtgttggttctcaagtttctttggttaggacttatagtagaaataatattgcttttaaaagagactttgcagctgctatggtgaagatgagtagaat |
35289350 |
T |
|
| Q |
776 |
taatcctctaacagggactaatggggagattagaaagaattgtaggcttgtgaa |
829 |
Q |
| |
|
|| ||||||||| ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
35289349 |
tagtcctctaactgggactaatggggagattagaaagaattgcaggcttgtgaa |
35289296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 279 - 831
Target Start/End: Complemental strand, 35280504 - 35279949
Alignment:
| Q |
279 |
tagcttggaggaccaacatgggtagtaccacttggaagaagagatgcaagaacagcaagccaaagtgcagcaaatagtcaaatcccttcaccattttctg |
378 |
Q |
| |
|
||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||| ||||| |
|
|
| T |
35280504 |
tagcttggaggtccttcatggatagtaccacttggaagaagagatgcaagaacagcaagtcaaagtgcagcaaacacccaaatcccttcaccagcttctg |
35280405 |
T |
|
| Q |
379 |
acctttccactctcaccaaaatgtttacagacaagggtttaactgcaagtgacctcacagtactttctggtgcacacaccataggccaaggagagtgcca |
478 |
Q |
| |
|
|||| ||||| ||||| ||||||||| | |||| ||| |||| ||| ||||| ||||| |||||||||||||||||||||||||||| ||| || || |
|
|
| T |
35280404 |
acctatccacactcactaaaatgtttcaaaacaaaggtctaacattaagagaccttacagtcctttctggtgcacacaccataggccaagcagaatgtca |
35280305 |
T |
|
| Q |
479 |
atttttcagaaatcgcatatacaatgaaaccaacattgacacaaactttgcaaccttaaggaaatcaaattgtcctctttctggtggtgacactaattta |
578 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| |||||||||||||| |||||||| ||||| |
|
|
| T |
35280304 |
atttttccgaaatcgcatatacaatgaaaccaacatcgacacaaactttgcaaccttaagaaaagcaaactgtcctctttctggcggtgacacaaatttg |
35280205 |
T |
|
| Q |
579 |
gcacctcttgatactcacactccaacaagttttgacaacaattactataaaaaccttgttgcaagcaaaggtcttttccattctgatcaagctcttttca |
678 |
Q |
| |
|
|| ||||||||| || | |||| | ||||||||||||||| |||| | || ||||| | ||||| ||| | ||||||||||||| ||||||| |
|
|
| T |
35280204 |
gctcctcttgattctgtctctcctgttacttttgacaacaattattatagggatctagttgctaataaaggacttcttaattctgatcaagcacttttca |
35280105 |
T |
|
| Q |
679 |
a---taatgggtctcaagataatttggttaggagttatagtatcaatggtgctacttttagaagagactttgctgttgctatggtgaaactgagtaaaat |
775 |
Q |
| |
|
| | ||| |||| || | |||||||||| ||||||||| |||||| | |||||||||||||||||||| ||||||||||||| |||| | ||| |
|
|
| T |
35280104 |
atggtgttggttctccagtttctttggttagggcttatagtataaatggttttgcttttagaagagactttgcttttgctatggtgaagatgagcagaat |
35280005 |
T |
|
| Q |
776 |
taatcctctaacagggactaatggggagattagaaagaattgtaggcttgtgaatt |
831 |
Q |
| |
|
|| |||||| ||||||||||||||||| |||||||||||||| || |||||||||| |
|
|
| T |
35280004 |
tagtcctctcacagggactaatggggaaattagaaagaattgcagacttgtgaatt |
35279949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 279 - 834
Target Start/End: Complemental strand, 35275737 - 35275179
Alignment:
| Q |
279 |
tagcttggaggaccaacatgggtagtaccacttggaagaagagatgcaagaacagcaagccaaagtgcagcaaatagtcaaatcccttcaccattttctg |
378 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||| ||||| |
|
|
| T |
35275737 |
tagcttggaggaccctcatgggcagtaccacttggaagaagagatgcaagaacagcaagtcaaagtgcagcaaatagccaaatccctggaccatcttctg |
35275638 |
T |
|
| Q |
379 |
acctttccactctcaccaaaatgtttacagacaagggtttaactgcaagtgacctcacagtactttctggtgcacacaccataggccaaggagagtgcca |
478 |
Q |
| |
|
|||| || || ||||| | ||||||| | |||| || |||| || |||||| ||||| || |||||||||||||||||||| ||| ||||| || |
|
|
| T |
35275637 |
acctatcgacactcactagaatgtttcaaaacaaaagtctaacattaaatgaccttacagtcctatctggtgcacacaccatagggcaaactgagtgtca |
35275538 |
T |
|
| Q |
479 |
atttttcagaaatcgcatatacaatgaaaccaacattgacacaaactttgcaaccttaaggaaatcaaattgtcctctttctggtggtgacactaattta |
578 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||||||| |||||| || |||||||| ||| |||||| ||| |||||||||||||| |||||| |
|
|
| T |
35275537 |
atttttcagaaatcgcatacacaatgaagccaacattgacagaaacttggctaccttaagaaaaagaaattgccctacctctggtggtgacaccaattta |
35275438 |
T |
|
| Q |
579 |
gcacctcttgatactcacactccaacaagttttgacaacaattactataaaaaccttgttgcaagcaaaggtcttttccattctgatcaagctcttttca |
678 |
Q |
| |
|
||||| ||||| || ||||||||| | |||||||||||||| ||||| ||||| |||| | ||||||||| | ||||||||||||| |||||||| |
|
|
| T |
35275437 |
gcaccctttgattctgtcactccaactaaatttgacaacaattattataaggaccttattgctaataaaggtcttctacattctgatcaagttcttttca |
35275338 |
T |
|
| Q |
679 |
a---taatgggtctcaagataatttggttaggagttatagtatcaatggtgctacttttagaagagactttgctgttgctatggtgaaactgagtaaaat |
775 |
Q |
| |
|
| | ||| |||||| | ||||||||||| ||||||| |||||||| ||||| ||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
35275337 |
atggtggtggttctcaaatttctttggttaggaagtatagtagagatggtgctgctttttctagagactttgctgctgctatggtgaagatgagtaaaat |
35275238 |
T |
|
| Q |
776 |
taatcctctaacagggactaatggggagattagaaagaattgtaggcttgtgaattgat |
834 |
Q |
| |
|
|| |||||| || ||||||||||| ||||| ||||||||||| ||| |||||||||||| |
|
|
| T |
35275237 |
tagtcctcttactgggactaatggtgagatcagaaagaattgcaggattgtgaattgat |
35275179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 35312697 - 35312554
Alignment:
| Q |
17 |
acctaacaaaaactcagctaggggtttcgaagtgattgataccattaaaaccagtgttgaagcttcatgcaatgccattgtatcttgtgctgatattcta |
116 |
Q |
| |
|
|||||| || ||||||| | |||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||| |||||||| ||||||||| |
|
|
| T |
35312697 |
acctaataacaactcagtcaagggtttcgaagtgattgataacattaaaaacagtgttgaagcttcatgcaatgccactgtctcttgtgccgatattcta |
35312598 |
T |
|
| Q |
117 |
gcacttgcagcaagagatggtgtatttctggtgagtggtccatt |
160 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||| |||||| |
|
|
| T |
35312597 |
gcacttgcagcaagagatggagtagttctggtgagtgatccatt |
35312554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 7 - 136
Target Start/End: Complemental strand, 35281952 - 35281823
Alignment:
| Q |
7 |
aaaatgccgcacctaacaaaaactcagctaggggtttcgaagtgattgataccattaaaaccagtgttgaagcttcatgcaatgccattgtatcttgtgc |
106 |
Q |
| |
|
||||||| | |||||||||||| |||||||||||||| |||||||||||| | |||||||| |||||||||||| | |||| ||||| ||| |||||||| |
|
|
| T |
35281952 |
aaaatgctggacctaacaaaaattcagctaggggttttgaagtgattgatgcaattaaaactagtgttgaagctgcttgcagtgccactgtctcttgtgc |
35281853 |
T |
|
| Q |
107 |
tgatattctagcacttgcagcaagagatgg |
136 |
Q |
| |
|
||||||||| ||||||||| | |||||||| |
|
|
| T |
35281852 |
tgatattcttgcacttgcaactagagatgg |
35281823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 7 - 136
Target Start/End: Complemental strand, 35290797 - 35290668
Alignment:
| Q |
7 |
aaaatgccgcacctaacaaaaactcagctaggggtttcgaagtgattgataccattaaaaccagtgttgaagcttcatgcaatgccattgtatcttgtgc |
106 |
Q |
| |
|
||||||| | |||||||||||| |||||||||||||| |||||||||||| | |||||||| |||||||||||| | |||| ||||| ||| |||||||| |
|
|
| T |
35290797 |
aaaatgctggacctaacaaaaattcagctaggggttttgaagtgattgatgcaattaaaactagtgttgaagctgcttgcagtgccactgtctcttgtgc |
35290698 |
T |
|
| Q |
107 |
tgatattctagcacttgcagcaagagatgg |
136 |
Q |
| |
|
||||||||| ||||||||| | |||||||| |
|
|
| T |
35290697 |
tgatattcttgcacttgcaactagagatgg |
35290668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 35276019 - 35275913
Alignment:
| Q |
30 |
tcagctaggggtttcgaagtgattgataccattaaaaccagtgttgaagcttcatgcaatgccattgtatcttgtgctgatattctagcacttgcagcaa |
129 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||||||||||||| || | ||||| |||| || ||||||||||||||||| ||||||||| | | |
|
|
| T |
35276019 |
tcagctaggggttttgaagtgattgatacaattaaaaccagtgttgaaactgcttgcaaagccaccgtctcttgtgctgatattcttgcacttgcaacta |
35275920 |
T |
|
| Q |
130 |
gagatgg |
136 |
Q |
| |
|
||||||| |
|
|
| T |
35275919 |
gagatgg |
35275913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 894 - 936
Target Start/End: Complemental strand, 35289270 - 35289228
Alignment:
| Q |
894 |
gtcataaaggttgactagatcttggacacatcggcaattgtag |
936 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
35289270 |
gtcataaaggttgactagatcttggacacattggcaattgtag |
35289228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 894 - 936
Target Start/End: Complemental strand, 35307023 - 35306981
Alignment:
| Q |
894 |
gtcataaaggttgactagatcttggacacatcggcaattgtag |
936 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
35307023 |
gtcataaaggttgactagatcttggacacattggcaattgtag |
35306981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 894 - 936
Target Start/End: Complemental strand, 35322024 - 35321982
Alignment:
| Q |
894 |
gtcataaaggttgactagatcttggacacatcggcaattgtag |
936 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
35322024 |
gtcataaaggttgactagatcttgaacacattggcaattgtag |
35321982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 887 - 924
Target Start/End: Complemental strand, 35275056 - 35275019
Alignment:
| Q |
887 |
ggtcttggtcataaaggttgactagatcttggacacat |
924 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
35275056 |
ggtctaggtcataaaggttgactagatcttggacacat |
35275019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 36190635 - 36190689
Alignment:
| Q |
280 |
agcttggaggaccaacatgggtagtaccacttggaagaagagatgcaagaacagc |
334 |
Q |
| |
|
|||||||||| |||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
36190635 |
agcttggaggcccaacatgggatgtgaaacttggaagaagagatgcaagaacagc |
36190689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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