View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4430_high_2 (Length: 555)

Name: NF4430_high_2
Description: NF4430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4430_high_2
NF4430_high_2
[»] chr4 (41 HSPs)
chr4 (11-555)||(22448590-22449133)
chr4 (482-546)||(41520960-41521024)
chr4 (480-553)||(18004464-18004537)
chr4 (495-555)||(16733523-16733583)
chr4 (482-552)||(19908692-19908762)
chr4 (482-552)||(30135140-30135210)
chr4 (508-553)||(3299111-3299156)
chr4 (482-555)||(8027388-8027461)
chr4 (482-555)||(18903749-18903822)
chr4 (485-554)||(40070962-40071031)
chr4 (482-555)||(42845022-42845095)
chr4 (506-555)||(45970722-45970771)
chr4 (481-552)||(19479467-19479538)
chr4 (508-555)||(19935178-19935225)
chr4 (480-551)||(39595926-39595997)
chr4 (498-553)||(53530008-53530063)
chr4 (482-528)||(836226-836272)
chr4 (489-554)||(7241914-7241980)
chr4 (482-528)||(8415486-8415532)
chr4 (493-551)||(9392934-9392992)
chr4 (481-555)||(22630350-22630424)
chr4 (482-555)||(27550724-27550798)
chr4 (504-553)||(7922263-7922312)
chr4 (482-555)||(12671739-12671812)
chr4 (490-551)||(17423176-17423237)
chr4 (508-553)||(19124639-19124684)
chr4 (482-555)||(21318244-21318317)
chr4 (482-555)||(43034333-43034406)
chr4 (509-546)||(46745356-46745393)
chr4 (493-546)||(47537448-47537501)
chr4 (482-551)||(48171882-48171951)
chr4 (488-552)||(15175141-15175204)
chr4 (506-546)||(24063223-24063263)
chr4 (505-553)||(29910460-29910508)
chr4 (482-546)||(34960148-34960212)
chr4 (482-546)||(34969384-34969448)
chr4 (497-553)||(42316830-42316886)
chr4 (498-542)||(43183000-43183044)
chr4 (508-552)||(56204947-56204991)
chr4 (482-542)||(56551583-56551643)
chr4 (482-554)||(56556113-56556185)
[»] chr6 (17 HSPs)
chr6 (485-555)||(8809303-8809373)
chr6 (497-555)||(1918464-1918522)
chr6 (485-555)||(13496113-13496183)
chr6 (482-552)||(15187063-15187133)
chr6 (482-552)||(15473473-15473543)
chr6 (482-555)||(29283812-29283885)
chr6 (494-555)||(32193862-32193923)
chr6 (491-555)||(2105902-2105966)
chr6 (493-555)||(7081656-7081718)
chr6 (493-555)||(31971526-31971588)
chr6 (482-555)||(2445296-2445369)
chr6 (508-553)||(4450261-4450306)
chr6 (512-553)||(6470637-6470678)
chr6 (506-554)||(3373396-3373444)
chr6 (497-553)||(8381200-8381256)
chr6 (482-530)||(17113451-17113499)
chr6 (480-528)||(33542796-33542844)
[»] chr2 (34 HSPs)
chr2 (487-546)||(32458308-32458367)
chr2 (482-555)||(16082129-16082203)
chr2 (482-552)||(23250311-23250381)
chr2 (489-554)||(9964489-9964554)
chr2 (480-553)||(20644003-20644076)
chr2 (482-555)||(29896285-29896358)
chr2 (482-542)||(24581008-24581068)
chr2 (480-555)||(41555291-41555366)
chr2 (505-555)||(22358039-22358089)
chr2 (493-555)||(31812975-31813037)
chr2 (482-555)||(31815878-31815951)
chr2 (484-528)||(18693655-18693699)
chr2 (482-546)||(25395433-25395497)
chr2 (508-552)||(37119275-37119319)
chr2 (508-555)||(7537107-7537154)
chr2 (485-552)||(29734691-29734758)
chr2 (482-528)||(660813-660859)
chr2 (497-555)||(6723083-6723141)
chr2 (494-552)||(9718394-9718452)
chr2 (508-554)||(40967388-40967434)
chr2 (485-555)||(42475104-42475174)
chr2 (493-555)||(43117192-43117254)
chr2 (506-555)||(7029406-7029455)
chr2 (494-551)||(19079765-19079822)
chr2 (481-546)||(19159947-19160012)
chr2 (493-554)||(25186244-25186305)
chr2 (504-553)||(28771581-28771630)
chr2 (482-555)||(29133475-29133548)
chr2 (508-553)||(35727436-35727481)
chr2 (508-553)||(37320534-37320579)
chr2 (504-553)||(39068721-39068770)
chr2 (508-553)||(39761437-39761482)
chr2 (497-553)||(12893250-12893306)
chr2 (508-552)||(16204834-16204878)
[»] chr8 (21 HSPs)
chr8 (489-555)||(7553676-7553742)
chr8 (480-551)||(29652219-29652290)
chr8 (482-549)||(43778022-43778089)
chr8 (507-553)||(10967211-10967257)
chr8 (482-543)||(18533678-18533739)
chr8 (482-555)||(27718885-27718958)
chr8 (494-546)||(4263821-4263873)
chr8 (482-554)||(27134411-27134483)
chr8 (480-552)||(28436536-28436608)
chr8 (508-555)||(1877679-1877726)
chr8 (480-555)||(11708983-11709058)
chr8 (480-554)||(29716689-29716763)
chr8 (509-555)||(37750017-37750063)
chr8 (481-554)||(1764944-1765017)
chr8 (482-555)||(28084279-28084351)
chr8 (482-555)||(29376898-29376971)
chr8 (482-547)||(35700386-35700451)
chr8 (508-549)||(38489219-38489260)
chr8 (483-555)||(13286128-13286199)
chr8 (484-552)||(24695999-24696067)
chr8 (493-553)||(42208471-42208531)
[»] chr7 (28 HSPs)
chr7 (486-555)||(25246768-25246837)
chr7 (482-554)||(1285060-1285132)
chr7 (507-555)||(3948051-3948099)
chr7 (482-554)||(22564133-22564205)
chr7 (482-554)||(28200376-28200448)
chr7 (480-555)||(22267578-22267653)
chr7 (482-528)||(18023703-18023749)
chr7 (480-550)||(37307863-37307933)
chr7 (480-554)||(44718802-44718876)
chr7 (483-552)||(19599145-19599214)
chr7 (482-551)||(41250038-41250107)
chr7 (482-555)||(42829225-42829298)
chr7 (508-549)||(45425456-45425497)
chr7 (508-555)||(34807215-34807263)
chr7 (508-555)||(5458088-5458135)
chr7 (488-551)||(44106629-44106692)
chr7 (505-555)||(9819563-9819613)
chr7 (505-555)||(10721488-10721538)
chr7 (513-555)||(19097608-19097650)
chr7 (485-555)||(23198743-23198813)
chr7 (508-546)||(27908737-27908775)
chr7 (509-555)||(29734808-29734854)
chr7 (508-553)||(33254177-33254222)
chr7 (508-553)||(38911298-38911343)
chr7 (508-552)||(10236922-10236966)
chr7 (482-554)||(10242479-10242550)
chr7 (482-526)||(26717919-26717963)
chr7 (482-526)||(37495909-37495953)
[»] chr3 (23 HSPs)
chr3 (485-555)||(41168132-41168202)
chr3 (493-552)||(5428438-5428497)
chr3 (482-553)||(51882191-51882262)
chr3 (482-555)||(31138414-31138486)
chr3 (508-555)||(7824804-7824851)
chr3 (482-525)||(8136623-8136666)
chr3 (482-553)||(10922299-10922370)
chr3 (506-553)||(22486682-22486729)
chr3 (487-554)||(48517669-48517736)
chr3 (493-555)||(5349525-5349587)
chr3 (482-555)||(24120411-24120485)
chr3 (512-554)||(29791774-29791816)
chr3 (489-555)||(46903905-46903971)
chr3 (482-528)||(48944347-48944392)
chr3 (482-555)||(7464482-7464555)
chr3 (482-555)||(7829893-7829966)
chr3 (508-553)||(12976619-12976664)
chr3 (484-529)||(24348410-24348455)
chr3 (482-555)||(28430556-28430629)
chr3 (493-554)||(32484276-32484337)
chr3 (493-553)||(2563928-2563988)
chr3 (505-553)||(17588361-17588409)
chr3 (508-552)||(38573590-38573634)
[»] chr5 (28 HSPs)
chr5 (482-555)||(8544980-8545053)
chr5 (480-541)||(20206526-20206587)
chr5 (494-555)||(40445980-40446041)
chr5 (480-555)||(5107234-5107309)
chr5 (480-555)||(27903110-27903185)
chr5 (482-552)||(1538799-1538869)
chr5 (482-555)||(13796327-13796400)
chr5 (482-555)||(13864341-13864414)
chr5 (508-553)||(18278276-18278321)
chr5 (508-553)||(34206226-34206271)
chr5 (513-553)||(20211672-20211712)
chr5 (490-553)||(22394034-22394097)
chr5 (498-541)||(25709744-25709787)
chr5 (508-555)||(36623191-36623238)
chr5 (508-554)||(7713530-7713576)
chr5 (497-551)||(31159430-31159484)
chr5 (511-553)||(39917904-39917946)
chr5 (505-542)||(1642344-1642381)
chr5 (508-553)||(8639346-8639391)
chr5 (485-554)||(13409548-13409617)
chr5 (482-555)||(15889408-15889481)
chr5 (523-555)||(7671228-7671260)
chr5 (504-552)||(9123858-9123906)
chr5 (482-546)||(16579365-16579429)
chr5 (495-551)||(18147719-18147775)
chr5 (497-553)||(35109399-35109455)
chr5 (482-526)||(37021363-37021407)
chr5 (482-554)||(41650931-41651002)
[»] chr1 (33 HSPs)
chr1 (508-553)||(31401670-31401715)
chr1 (497-552)||(24631839-24631894)
chr1 (490-553)||(25364995-25365058)
chr1 (506-553)||(47835730-47835777)
chr1 (481-555)||(3431327-3431401)
chr1 (482-555)||(14905407-14905480)
chr1 (482-555)||(16475904-16475977)
chr1 (483-552)||(34848476-34848545)
chr1 (493-553)||(6000145-6000205)
chr1 (493-552)||(10654449-10654509)
chr1 (497-553)||(17221526-17221582)
chr1 (482-553)||(29441872-29441943)
chr1 (482-553)||(32950752-32950823)
chr1 (482-545)||(32962570-32962633)
chr1 (507-554)||(40618908-40618955)
chr1 (513-547)||(17683743-17683777)
chr1 (482-552)||(28832162-28832232)
chr1 (497-555)||(30795698-30795756)
chr1 (493-555)||(34877668-34877730)
chr1 (508-546)||(41711727-41711765)
chr1 (482-555)||(1091176-1091249)
chr1 (493-554)||(7574120-7574181)
chr1 (506-555)||(8153132-8153181)
chr1 (482-555)||(16033441-16033514)
chr1 (494-555)||(34632166-34632227)
chr1 (482-555)||(44243870-44243943)
chr1 (490-555)||(49222813-49222878)
chr1 (482-551)||(52262157-52262226)
chr1 (508-552)||(3393585-3393629)
chr1 (490-546)||(9616888-9616944)
chr1 (482-554)||(16967185-16967257)
chr1 (482-554)||(39252248-39252320)
chr1 (503-555)||(49875611-49875663)
[»] scaffold0122 (1 HSPs)
scaffold0122 (482-555)||(14177-14250)
[»] scaffold0088 (1 HSPs)
scaffold0088 (508-555)||(48018-48065)
[»] scaffold0028 (1 HSPs)
scaffold0028 (487-528)||(72771-72812)
[»] scaffold0016 (1 HSPs)
scaffold0016 (482-555)||(99034-99107)
[»] scaffold0533 (1 HSPs)
scaffold0533 (483-554)||(8842-8914)
[»] scaffold0238 (1 HSPs)
scaffold0238 (497-553)||(25388-25444)
[»] scaffold0126 (1 HSPs)
scaffold0126 (497-553)||(34894-34950)


Alignment Details
Target: chr4 (Bit Score: 452; Significance: 0; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 11 - 555
Target Start/End: Complemental strand, 22449133 - 22448590
Alignment:
Q  11 cacagaatgtctcaaatttcttcaatggccattaatcataataggagtttccatcatggttgtttcgttagccggttttgcaggggcgtgttaccgtaac 110  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22449133 cacagactgtctcaaatttcttcaatggccattaatcataataggagtttccatcatggttgtttcgctagccggttttgcaggggcgtgttaccgtaac 22449034  T
Q  111 actttcttgttacgtttttatcttgttgtcatgttctgtgtcattggtgtgcttattggatttataatatttgcttatgttgtaacggataaagggtctg 210  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22449033 actttcttgttacgtttttatcttgttgtcatgttctttgtcattggtgtgcttattggatttataatatttgcatatgttgtaacggataaagggtctg 22448934  T
Q  211 gaagaagggtgatgaatagagggtatttggattattatttggaggattattctggttggttggaagagagagtggctagtgatgagtattgggggaagat 310  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22448933 gaagaagggttatgaatagagggtatttggattattatttggaggattattctggttggttggaagagagagtggctagtgatgagtattgggggaagat 22448834  T
Q  311 tagttcttgtataagggattctaaagcttgtaggaagttggctagaaattttaatgatgttcctgaaactgctgatatgttctttgaaagaaaactcaat 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22448833 tagttcttgtataagggattctaaagcttgtaggaagttggctagaaattttaatgatgttcctgagactgctgatatgttctttgaaagaaaactcaat 22448734  T
Q  411 cctattcaggtatgttcttatatccggatctctttgttgtttttatgtttaatcaatgatannnnnnnctatggtggtcggagtttgaaccttggatctt 510  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||        | || |||| | ||||||||||||| |||||    
T  22448733 cctattcaggtatgttcttatatctggatctatttcttgtttttatgtttaatcaatgatattttttt-tgtgatggttgaagtttgaaccttgaatctt 22448635  T
Q  511 gcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||    
T  22448634 gcatatattacgcattgttcttatcaattgagttaaactcacgag 22448590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 482 - 546
Target Start/End: Complemental strand, 41521024 - 41520960
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaa 546  Q
    ||||||||||||||||||||||| | ||||||||||||| ||||||| | || ||||||||||||    
T  41521024 tggtggtcggagtttgaaccttgaaccttgcatatattatgcattgtctctaccaactgagttaa 41520960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 480 - 553
Target Start/End: Complemental strand, 18004537 - 18004464
Alignment:
Q  480 tatggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||||||||||||||||||| | ||||||| ||||||||| ||||| || ||| |||||||| |||| |||||    
T  18004537 tatggtggtcggagtttgaacgtcggatcttacatatattatgcattattcttaccaactgagctaaattcacg 18004464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 495 - 555
Target Start/End: Original strand, 16733523 - 16733583
Alignment:
Q  495 ttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||| |||||||||||||||||  |||| | ||||||||||||||||| ||||||||    
T  16733523 ttgaacctcggatcttgcatatattatacattatctttatcaactgagttaagctcacgag 16733583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 552
Target Start/End: Complemental strand, 19908762 - 19908692
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    |||||||||| ||| |||||| ||| ||||||||||||| |||||||  ||| |||||||||||| |||||    
T  19908762 tggtggtcggggttcgaacctcggaccttgcatatattatgcattgtccttaccaactgagttaagctcac 19908692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 552
Target Start/End: Complemental strand, 30135210 - 30135140
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    |||||||||| |||||||||| ||||||  ||||||||| ||||| |  |||||||||||||||| |||||    
T  30135210 tggtggtcggggtttgaacctcggatctgacatatattatgcattatccttatcaactgagttaagctcac 30135140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 508 - 553
Target Start/End: Original strand, 3299111 - 3299156
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||    
T  3299111 cttgcatatattatgcattgttttaaccaactgagttaaactcacg 3299156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 8027388 - 8027461
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||| |||||||||   |||||||||||||||| ||||| |  ||| |||||||| ||||||||||||    
T  8027388 tggtggtcggggtttgaacccccgatcttgcatatattatgcattatccttaccaactgagctaaactcacgag 8027461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 18903749 - 18903822
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||| | |||||||||   || ||| ||||||||| ||||| ||||||||||||||| ||||||||||||    
T  18903749 tggtggtcagggtttgaaccccagaccttacatatattatgcattatttttatcaactgagctaaactcacgag 18903822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 485 - 554
Target Start/End: Original strand, 40070962 - 40071031
Alignment:
Q  485 tggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    ||||||| |||||||| | ||| ||||||||||||| ||||||||  || |||||||||||| |||||||    
T  40070962 tggtcggggtttgaacttcggaccttgcatatattatgcattgttcataccaactgagttaagctcacga 40071031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 42845095 - 42845022
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||||||||| ||||  ||| ||||||||||||| |||||||  ||  |||||||||||| ||||||||    
T  42845095 tggtggtcggagttttaaccccggaccttgcatatattatgcattgtcctttccaactgagttaagctcacgag 42845022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 506 - 555
Target Start/End: Original strand, 45970722 - 45970771
Alignment:
Q  506 atcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||||||||| ||||||||| || |||||||||||| ||||||||    
T  45970722 atcttgcatatattatgcattgtttctaccaactgagttaagctcacgag 45970771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 552
Target Start/End: Original strand, 19479467 - 19479538
Alignment:
Q  481 atggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    ||||||||||| |||||||||  ||| ||||||||||||| ||||||||  ||| ||||||| ||| |||||    
T  19479467 atggtggtcggggtttgaaccccggaccttgcatatattatgcattgttcatattaactgagctaagctcac 19479538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 508 - 555
Target Start/End: Original strand, 19935178 - 19935225
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||| |||| |||||||| |||||||||||| ||||||||||||    
T  19935178 cttgcatagattatgcattgttcttatcaactgagctaaactcacgag 19935225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 551
Target Start/End: Original strand, 39595926 - 39595997
Alignment:
Q  480 tatggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactca 551  Q
    |||||||||||||||||||||||  || ||||||||||||| | ||| ||| |||||| |||| ||| ||||    
T  39595926 tatggtggtcggagtttgaacctcagaccttgcatatattatgtattatttatatcaattgagctaagctca 39595997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 498 - 553
Target Start/End: Complemental strand, 53530063 - 53530008
Alignment:
Q  498 aaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||| ||| ||| ||||||||| ||||||||||||| ||||||||||| ||||||    
T  53530063 aacctcggaccttacatatattatgcattgtttttattaactgagttaagctcacg 53530008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 528
Target Start/End: Original strand, 836226 - 836272
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgt 528  Q
    ||||||||||||||||||||| ||| ||||||||||||  |||||||    
T  836226 tggtggtcggagtttgaacctcggaccttgcatatattttgcattgt 836272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 554
Target Start/End: Complemental strand, 7241980 - 7241914
Alignment:
Q  489 cggagtttgaaccttggatcttgcatatattacgca-ttgtttttatcaactgagttaaactcacga 554  Q
    |||||||||||| ||||| ||||||||||||| ||| |||||  || |||||||| |||||||||||    
T  7241980 cggagtttgaactttggaacttgcatatattatgcatttgttcctaacaactgagctaaactcacga 7241914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 528
Target Start/End: Original strand, 8415486 - 8415532
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgt 528  Q
    |||||||| | |||||||||||||||||| ||||||||| |||||||    
T  8415486 tggtggtcagggtttgaaccttggatcttacatatattatgcattgt 8415532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 551
Target Start/End: Complemental strand, 9392992 - 9392934
Alignment:
Q  493 gtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactca 551  Q
    ||||||||| |||||||| ||||||| | |||||||  |||| ||||||||||||||||    
T  9392992 gtttgaaccctggatcttacatatataatgcattgtccttattaactgagttaaactca 9392934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 555
Target Start/End: Original strand, 22630350 - 22630424
Alignment:
Q  481 atggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||||| ||||||||||  || ||||||||||||| |||||||   || |||||||| ||| ||||||||    
T  22630350 atggtggtcggggtttgaacctcagaccttgcatatattatgcattgtcactaccaactgagataatctcacgag 22630424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 27550724 - 27550798
Alignment:
Q  482 tggtggtcggagtttgaac-cttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||| | |||||||||| | |||| ||||||||||||| ||||| ||| | ||||||||||||| ||||||||    
T  27550724 tggtggccagagtttgaacacctggaccttgcatatattatgcattatttctttcaactgagttaagctcacgag 27550798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 553
Target Start/End: Original strand, 7922263 - 7922312
Alignment:
Q  504 ggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||||||||||||||| ||||||| |||| |||||||| ||| ||||||    
T  7922263 ggatcttgcatatattatgcattgtctttaccaactgagataagctcacg 7922312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 12671739 - 12671812
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||  ||| |||||  ||||||||||||| ||| ||||||| | || |||||||| ||||||||||||    
T  12671739 tggtggtcgaggttcgaaccccggatcttgcatattttatgcattgtctataccaactgagctaaactcacgag 12671812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 551
Target Start/End: Original strand, 17423176 - 17423237
Alignment:
Q  490 ggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactca 551  Q
    ||||||||||||  ||| ||||||||||||| ||||||| | || |||||||||||| ||||    
T  17423176 ggagtttgaaccccggaccttgcatatattatgcattgtctctaccaactgagttaacctca 17423237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 553
Target Start/End: Original strand, 19124639 - 19124684
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||||||||||| | ||||| ||||||||||||||||| ||||||    
T  19124639 cttgcatatattatgtattgtctttatcaactgagttaagctcacg 19124684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 21318244 - 21318317
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||| ||||||||| | || ||||||||||||| |||||||   || |||||||||||| ||| ||||    
T  21318244 tggtggtcggggtttgaaccctagaccttgcatatattatgcattgtccctaccaactgagttaagctcgcgag 21318317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 43034333 - 43034406
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||| ||| ||||||||||  || ||||||||||||| |||||||   || |||||||||||| ||||||||    
T  43034333 tggtggccggggtttgaacctcagaccttgcatatattatgcattgtccataccaactgagttaagctcacgag 43034406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 546
Target Start/End: Original strand, 46745356 - 46745393
Alignment:
Q  509 ttgcatatattacgcattgtttttatcaactgagttaa 546  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  46745356 ttgcatatattatgcattgtttttatcaaccgagttaa 46745393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 546
Target Start/End: Original strand, 47537448 - 47537501
Alignment:
Q  493 gtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaa 546  Q
    ||||||| ||||||||||| |||| ||| ||||||||| || ||||||||||||    
T  47537448 gtttgaatcttggatcttgtatattttatgcattgtttataccaactgagttaa 47537501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 551
Target Start/End: Complemental strand, 48171951 - 48171882
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactca 551  Q
    |||||||||| |||||||||| | | |||||||||||||  |||||| | || |||||||||||| ||||    
T  48171951 tggtggtcggggtttgaacctagaaccttgcatatattatacattgtctctaccaactgagttaagctca 48171882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 552
Target Start/End: Complemental strand, 15175204 - 15175141
Alignment:
Q  488 tcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    |||| ||||||||| || |||||||||||||||  |||| || |||||||||||| |||||||||    
T  15175204 tcggggtttgaaccatg-atcttgcatatattatacattattcttatcaactgagctaaactcac 15175141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 546
Target Start/End: Original strand, 24063223 - 24063263
Alignment:
Q  506 atcttgcatatattacgcattgtttttatcaactgagttaa 546  Q
    ||||||||||||||| ||||||| | |||||||||||||||    
T  24063223 atcttgcatatattatgcattgtctctatcaactgagttaa 24063263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 29910508 - 29910460
Alignment:
Q  505 gatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    |||||||||||||||| |||||||  ||||||| |||||||| ||||||    
T  29910508 gatcttgcatatattatgcattgtccttatcaattgagttaagctcacg 29910460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 546
Target Start/End: Original strand, 34960148 - 34960212
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaa 546  Q
    |||||||||| ||| |||||| | |||||  |||||||| ||||||||| || ||||||||||||    
T  34960148 tggtggtcggggttcgaacctcgaatcttatatatattatgcattgtttataccaactgagttaa 34960212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 546
Target Start/End: Original strand, 34969384 - 34969448
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaa 546  Q
    |||||||||||||||||||| || | |||||||||||||   ||||||  |||||||| ||||||    
T  34969384 tggtggtcggagtttgaaccctgaaccttgcatatattatatattgttcatatcaactaagttaa 34969448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 553
Target Start/End: Original strand, 42316830 - 42316886
Alignment:
Q  497 gaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    |||||| ||| ||||||||||||| ||| ||| |||| |||||||||||| ||||||    
T  42316830 gaacctcggaccttgcatatattatgcactgtctttaccaactgagttaagctcacg 42316886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 498 - 542
Target Start/End: Original strand, 43183000 - 43183044
Alignment:
Q  498 aaccttggatcttgcatatattacgcattgtttttatcaactgag 542  Q
    |||||| || ||||||||||||| ||||||| |||||||||||||    
T  43183000 aaccttagaccttgcatatattatgcattgtctttatcaactgag 43183044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 552
Target Start/End: Complemental strand, 56204991 - 56204947
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    ||||||||||||| |||||||  ||| ||||||||||||||||||    
T  56204991 cttgcatatattatgcattgtccttaccaactgagttaaactcac 56204947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 542
Target Start/End: Original strand, 56551583 - 56551643
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgag 542  Q
    |||||| ||| |||||||||| ||| ||||||||||||| |||||||  ||| ||||||||    
T  56551583 tggtggccggggtttgaacctcggaccttgcatatattatgcattgtccttaccaactgag 56551643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 554
Target Start/End: Complemental strand, 56556185 - 56556113
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    |||||| |||||||||||||||| | ||| |||||||   ||| ||| | || ||||||||||||||||||||    
T  56556185 tggtggccggagtttgaaccttgcacctttcatatatcctgcactgtctctaccaactgagttaaactcacga 56556113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 485 - 555
Target Start/End: Complemental strand, 8809373 - 8809303
Alignment:
Q  485 tggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||| |||||||||| ||||||||||||||||| |||||||||||||||| |||  ||||||||||||    
T  8809373 tggtcggggtttgaacctcggatcttgcatatattatgcattgtttttatcaattgaactaaactcacgag 8809303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 497 - 555
Target Start/End: Original strand, 1918464 - 1918522
Alignment:
Q  497 gaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||| ||| ||||||||||||| ||||||| | || |||||||||||||||||||||    
T  1918464 gaacctcggaccttgcatatattatgcattgtctataccaactgagttaaactcacgag 1918522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 485 - 555
Target Start/End: Complemental strand, 13496183 - 13496113
Alignment:
Q  485 tggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||| ||||||||   ||| ||||||||||||| ||||||||  ||||||||||||||| ||||||||    
T  13496183 tggtcggggtttgaactccggaccttgcatatattatgcattgttcatatcaactgagttaagctcacgag 13496113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 552
Target Start/End: Complemental strand, 15187133 - 15187063
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    |||||||||| |||||||||| ||| ||||||||||||| |||||||  |||||| ||||| ||| |||||    
T  15187133 tggtggtcggggtttgaacctcggaccttgcatatattatgcattgtacttatcagctgagctaagctcac 15187063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 552
Target Start/End: Original strand, 15473473 - 15473543
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    |||||||||| |||||||||| ||| ||||||||||||| |||||||  |||||| ||||| ||| |||||    
T  15473473 tggtggtcggggtttgaacctcggaccttgcatatattatgcattgtacttatcagctgagctaagctcac 15473543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 29283885 - 29283812
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||||||||||||| | || |||||||||||||  |||||| | || |||||||||||| || |||||    
T  29283885 tggtggtcggagtttgaaccctagaccttgcatatattatacattgtctctaccaactgagttaagcttacgag 29283812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 494 - 555
Target Start/End: Original strand, 32193862 - 32193923
Alignment:
Q  494 tttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||| | | ||||||||||||| |||||||| ||| |||||||| ||||||||||||    
T  32193862 tttgaacctcgtaccttgcatatattatgcattgttcttaccaactgagctaaactcacgag 32193923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 491 - 555
Target Start/End: Complemental strand, 2105966 - 2105902
Alignment:
Q  491 gagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||||| | | ||| ||||||||| |||||||||||| |||| ||| ||||||||||||    
T  2105966 gagtttgaacctcgaaccttacatatattatgcattgtttttaccaaccgagctaaactcacgag 2105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 555
Target Start/End: Original strand, 7081656 - 7081718
Alignment:
Q  493 gtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||| |||||| || ||||||||||||| | ||||| ||||||||||||| ||| ||||||||    
T  7081656 gtttcaaccttagaccttgcatatattatgtattgtctttatcaactgagctaagctcacgag 7081718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 555
Target Start/End: Complemental strand, 31971588 - 31971526
Alignment:
Q  493 gtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||| ||| ||||||||||||| |||||||  ||| |||||||||||| || |||||    
T  31971588 gtttgaacctcggaccttgcatatattatgcattgtccttaccaactgagttaagcttacgag 31971526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 2445369 - 2445296
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||| ||| |||||  | |||||| |||||||| ||||||||  ||||||||||||||| || |||||    
T  2445369 tggtggtcggggttcgaaccccgaatcttgtatatattatgcattgttcatatcaactgagttaagcttacgag 2445296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 553
Target Start/End: Complemental strand, 4450306 - 4450261
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||||||||||| ||||||| ||||||||||||| ||| ||||||    
T  4450306 cttgcatatattatgcattgtctttatcaactgagctaagctcacg 4450261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 6470637 - 6470678
Alignment:
Q  512 catatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||    
T  6470637 catatattatgcattgtctttatcaactgagttaagctcacg 6470678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 554
Target Start/End: Original strand, 3373396 - 3373444
Alignment:
Q  506 atcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    ||||||||||||||| |||||||   |||||||||||||||| ||||||    
T  3373396 atcttgcatatattatgcattgtccatatcaactgagttaaattcacga 3373444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 553
Target Start/End: Original strand, 8381200 - 8381256
Alignment:
Q  497 gaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||| |||| ||||||||| ||| ||||||| |||| |||||||||||| ||||||    
T  8381200 gaaccctggaccttgcatatgttatgcattgtctttaccaactgagttaagctcacg 8381256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 530
Target Start/End: Original strand, 17113451 - 17113499
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgttt 530  Q
    ||||||||| |||||||||||  || ||||||||||||| |||||||||    
T  17113451 tggtggtcgaagtttgaacctcagaccttgcatatattatgcattgttt 17113499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 480 - 528
Target Start/End: Original strand, 33542796 - 33542844
Alignment:
Q  480 tatggtggtcggagtttgaaccttggatcttgcatatattacgcattgt 528  Q
    |||||||||||||||||||||  || | ||||||||||||| |||||||    
T  33542796 tatggtggtcggagtttgaactatgaaccttgcatatattatgcattgt 33542844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 9e-16; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 487 - 546
Target Start/End: Complemental strand, 32458367 - 32458308
Alignment:
Q  487 gtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaa 546  Q
    ||||||||||||||| |||| ||||||||||||| |||||||| ||||||||||||||||    
T  32458367 gtcggagtttgaaccctggaccttgcatatattatgcattgttcttatcaactgagttaa 32458308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 16082203 - 16082129
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgca-ttgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||||| |||||| ||||| ||||||||||||| ||| |||| |||||||| |||||||||||||||||    
T  16082203 tggtggtcggaggttgaactttggaccttgcatatattatgcatttgtctttatcaattgagttaaactcacgag 16082129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 482 - 552
Target Start/End: Original strand, 23250311 - 23250381
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    |||||||||| ||||||||| |||| ||||||||||||| |||||||| ||| |||||||||||| |||||    
T  23250311 tggtggtcggggtttgaaccctggaccttgcatatattatgcattgttcttaccaactgagttaagctcac 23250381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 489 - 554
Target Start/End: Complemental strand, 9964554 - 9964489
Alignment:
Q  489 cggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    ||||||| |||||  | ||||||||||||||||| ||||||  |||||||||||||||||||||||    
T  9964554 cggagttcgaaccccgaatcttgcatatattacgtattgttcatatcaactgagttaaactcacga 9964489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 480 - 553
Target Start/End: Complemental strand, 20644076 - 20644003
Alignment:
Q  480 tatggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||||||||||||||||||| | ||||||| ||||||||| ||||| || ||| |||||||| |||| |||||    
T  20644076 tatggtggtcggagtttgaacgtcggatcttacatatattatgcattattcttaccaactgagctaaattcacg 20644003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 29896285 - 29896358
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||| |||||||||    | ||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  29896285 tggtggtcggggtttgaaccccaaaccttgcatatattatgcattgtttctatcaactgaattaaactcacgag 29896358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 482 - 542
Target Start/End: Original strand, 24581008 - 24581068
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgag 542  Q
    |||||||||| |||||||||| | | ||||||||||||| ||||||||||||| |||||||    
T  24581008 tggtggtcggggtttgaacctcgaaccttgcatatattatgcattgtttttatgaactgag 24581068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 480 - 555
Target Start/End: Complemental strand, 41555366 - 41555291
Alignment:
Q  480 tatggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||||| ||||||||| ||||| |||  || ||||| ||||||||  || |||||||||||||||||||||    
T  41555366 tatggtggtcgaagtttgaactttggaccttatatgtattatgcattgttcctaccaactgagttaaactcacgag 41555291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 505 - 555
Target Start/End: Original strand, 22358039 - 22358089
Alignment:
Q  505 gatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||||||| || ||||| ||||||||||||||||||| ||||||||    
T  22358039 gatcttgcatatactatgcattatttttatcaactgagttaagctcacgag 22358089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 555
Target Start/End: Complemental strand, 31813037 - 31812975
Alignment:
Q  493 gtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||||||| |||||||||||||  || |||| ||| ||||||||||||||| |||||    
T  31813037 gtttgaaccttggaccttgcatatattatacactgttcttaccaactgagttaaacttacgag 31812975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 31815878 - 31815951
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||| |||||||||  ||| ||||||||||||| |||||||   || |||||||||||| ||||||||    
T  31815878 tggtggtcggggtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagttaagctcacgag 31815951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 528
Target Start/End: Original strand, 18693655 - 18693699
Alignment:
Q  484 gtggtcggagtttgaaccttggatcttgcatatattacgcattgt 528  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||    
T  18693655 gtggtcggggtttgaaccctggatcttgcatatattatgcattgt 18693699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 482 - 546
Target Start/End: Original strand, 25395433 - 25395497
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaa 546  Q
    ||||||||||  ||||||||||| | ||||||||||||| ||||||||  || ||||||||||||    
T  25395433 tggtggtcgggatttgaaccttgaaccttgcatatattatgcattgttcctaccaactgagttaa 25395497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 508 - 552
Target Start/End: Original strand, 37119275 - 37119319
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||    
T  37119275 cttgcatatattatgcattgttcatatcaactgagttaaactcac 37119319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 508 - 555
Target Start/End: Complemental strand, 7537154 - 7537107
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||||||| ||||||||  ||||||||||||||| ||||||||    
T  7537154 cttgcatatattatgcattgttcctatcaactgagttaatctcacgag 7537107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 485 - 552
Target Start/End: Complemental strand, 29734758 - 29734691
Alignment:
Q  485 tggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    ||||||| |||||||||  ||| ||||||||||||| |||||||   ||||||||||| |||||||||    
T  29734758 tggtcggggtttgaaccacggaccttgcatatattatgcattgtccatatcaactgagctaaactcac 29734691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 528
Target Start/End: Original strand, 660813 - 660859
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgt 528  Q
    |||||||||| ||||||||| |||| ||||||||||||| |||||||    
T  660813 tggtggtcggggtttgaaccctggaccttgcatatattatgcattgt 660859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 497 - 555
Target Start/End: Original strand, 6723083 - 6723141
Alignment:
Q  497 gaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||| |||| |||||||||||||  ||||||   ||||||||||||||||||||||||    
T  6723083 gaaccctggaccttgcatatattatacattgtccatatcaactgagttaaactcacgag 6723141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 9718452 - 9718394
Alignment:
Q  494 tttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    |||||||  |||| |||||| |||||| |||||||| |||||||||||||||| |||||    
T  9718452 tttgaactctggaacttgcaaatattatgcattgttcttatcaactgagttaagctcac 9718394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 508 - 554
Target Start/End: Original strand, 40967388 - 40967434
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    ||||||||||||| |||||||  |||||||||||||||| |||||||    
T  40967388 cttgcatatattatgcattgtccttatcaactgagttaagctcacga 40967434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 555
Target Start/End: Original strand, 42475104 - 42475174
Alignment:
Q  485 tggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||| ||| ||||||  || ||||||||| ||| ||||||||| || |||||||||||| ||||||||    
T  42475104 tggtcggggttcgaacctcagaccttgcatattttatgcattgtttataccaactgagttaagctcacgag 42475174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 555
Target Start/End: Original strand, 43117192 - 43117254
Alignment:
Q  493 gtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||||  || ||||||||||||| |||||||  ||| |||||||| ||||||||||||    
T  43117192 gtttgaacctcagaccttgcatatattatgcattgtccttaccaactgagctaaactcacgag 43117254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 555
Target Start/End: Original strand, 7029406 - 7029455
Alignment:
Q  506 atcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||||||||| | |||||||||| |||||||| ||| ||||||||    
T  7029406 atcttgcatatattatgtattgtttttaccaactgagctaatctcacgag 7029455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 551
Target Start/End: Original strand, 19079765 - 19079822
Alignment:
Q  494 tttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactca 551  Q
    |||||| ||| ||||||||||||||||  ||||||  |||||||||||||||| ||||    
T  19079765 tttgaatcttagatcttgcatatattatacattgtacttatcaactgagttaagctca 19079822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 546
Target Start/End: Complemental strand, 19160012 - 19159947
Alignment:
Q  481 atggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaa 546  Q
    |||| |||||||||||||||   | | ||||||||||||| ||||||||  |||||||||||||||    
T  19160012 atggcggtcggagtttgaactccgaaccttgcatatattatgcattgttcatatcaactgagttaa 19159947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 554
Target Start/End: Original strand, 25186244 - 25186305
Alignment:
Q  493 gtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    |||||||||  ||| ||||||||||||| |||||||   ||||||||||| |||||||||||    
T  25186244 gtttgaaccccggaccttgcatatattatgcattgtccatatcaactgagctaaactcacga 25186305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 553
Target Start/End: Complemental strand, 28771630 - 28771581
Alignment:
Q  504 ggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||||||||||||||| |||||||  ||| |||||||| ||||||||||    
T  28771630 ggatcttgcatatattatgcattgtccttaccaactgagctaaactcacg 28771581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 29133475 - 29133548
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||| ||| ||||| | |||||||||||| ||| ||||||||  || |||||||| |||||| |||||    
T  29133475 tggtggtcggggttcgaaccctagatcttgcatattttatgcattgttcataccaactgagctaaacttacgag 29133548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 553
Target Start/End: Complemental strand, 35727481 - 35727436
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||||||||||| |||||||| ||| |||||||||||| ||||||    
T  35727481 cttgcatatattatgcattgttcttaccaactgagttaagctcacg 35727436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 553
Target Start/End: Original strand, 37320534 - 37320579
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||||||||||| ||||||| |||| |||||||||||| ||||||    
T  37320534 cttgcatatattatgcattgtctttaccaactgagttaagctcacg 37320579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 553
Target Start/End: Original strand, 39068721 - 39068770
Alignment:
Q  504 ggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||||||||||||||| |||||||  |||||||||||| ||| ||||||    
T  39068721 ggatcttgcatatattatgcattgtccttatcaactgagctaagctcacg 39068770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 553
Target Start/End: Complemental strand, 39761482 - 39761437
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||||||||||| |||||||  |||||||||||| ||||||||||    
T  39761482 cttgcatatattatgcattgtccttatcaactgagctaaactcacg 39761437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 553
Target Start/End: Original strand, 12893250 - 12893306
Alignment:
Q  497 gaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    |||||||||| ||| |||||||||  ||||||| |||||||||||| ||| ||||||    
T  12893250 gaaccttggaccttacatatattatacattgttcttatcaactgagctaagctcacg 12893306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 552
Target Start/End: Original strand, 16204834 - 16204878
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    ||||||||||||| |||||||  |||||||||||||||| |||||    
T  16204834 cttgcatatattatgcattgtccttatcaactgagttaagctcac 16204878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 489 - 555
Target Start/End: Complemental strand, 7553742 - 7553676
Alignment:
Q  489 cggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||||||||||| ||||||||||||| |||||||   || |||||||||||||||||||||    
T  7553742 cggagtttgaaccttggaccttgcatatattatgcattgtccctaccaactgagttaaactcacgag 7553676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 480 - 551
Target Start/End: Complemental strand, 29652290 - 29652219
Alignment:
Q  480 tatggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactca 551  Q
    |||||||||||  ||||||||  |||| ||||||||||||| |||||||| |||||||||||| ||||||||    
T  29652290 tatggtggtcgaggtttgaactctggaccttgcatatattatgcattgttcttatcaactgagctaaactca 29652219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 482 - 549
Target Start/End: Complemental strand, 43778089 - 43778022
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaact 549  Q
    |||||||||||||||||||||  || ||||||||| ||| ||||||| | || |||||||||||||||    
T  43778089 tggtggtcggagtttgaacctcagaccttgcatattttatgcattgtctataccaactgagttaaact 43778022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 507 - 553
Target Start/End: Complemental strand, 10967257 - 10967211
Alignment:
Q  507 tcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||||    
T  10967257 tcttgcatatattatgcattgttcttatcaattgagttaaactcacg 10967211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 543
Target Start/End: Complemental strand, 18533739 - 18533678
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagt 543  Q
    ||||||| || |||||||||  ||||||||||||||||| |||||||| ||| |||||||||    
T  18533739 tggtggttggggtttgaaccccggatcttgcatatattatgcattgttcttaccaactgagt 18533678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 27718885 - 27718958
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||||||||||||   ||| ||||||||||||| |||||||   ||||||||||| ||| ||||||||    
T  27718885 tggtggtcggagtttgaactccggaccttgcatatattatgcattgtccatatcaactgagctaagctcacgag 27718958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 494 - 546
Target Start/End: Complemental strand, 4263873 - 4263821
Alignment:
Q  494 tttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaa 546  Q
    ||||||||| ||| |||||||| |||| |||||||| ||||||||||||||||    
T  4263873 tttgaacctcggaccttgcatacattatgcattgttcttatcaactgagttaa 4263821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 482 - 554
Target Start/End: Original strand, 27134411 - 27134483
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    |||| |||||||||||||||  |||  ||||||||||||  |||||||  || ||||||||||||||||||||    
T  27134411 tggttgtcggagtttgaaccccggactttgcatatattatacattgttcataccaactgagttaaactcacga 27134483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 480 - 552
Target Start/End: Original strand, 28436536 - 28436608
Alignment:
Q  480 tatggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    ||||||||||||||||||||| |||||  || ||||||||| ||||||||  |||||| |||| ||| |||||    
T  28436536 tatggtggtcggagtttgaactttggactttacatatattatgcattgttgatatcaattgagctaagctcac 28436608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 508 - 555
Target Start/End: Original strand, 1877679 - 1877726
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||||||| ||||||| | ||||||||||||||| ||||||||    
T  1877679 cttgcatatattatgcattgtctatatcaactgagttaagctcacgag 1877726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 555
Target Start/End: Complemental strand, 11709058 - 11708983
Alignment:
Q  480 tatggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||||| |||||||| | ||| ||||||||||||| |||||||   || |||||||| ||| ||||||||    
T  11709058 tatggtggtcggggtttgaacttcggaccttgcatatattatgcattgtccctaccaactgagctaagctcacgag 11708983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 554
Target Start/End: Original strand, 29716689 - 29716763
Alignment:
Q  480 tatggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    |||||||| ||||||||||| |  ||| ||||||||||||| | ||||||  || |||||||||||| |||||||    
T  29716689 tatggtggccggagtttgaatcccggaccttgcatatattatgaattgttcctaccaactgagttaagctcacga 29716763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 555
Target Start/End: Original strand, 37750017 - 37750063
Alignment:
Q  509 ttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||||| ||||||||  ||||||||||| ||||||||||||    
T  37750017 ttgcatatattatgcattgttcatatcaactgagctaaactcacgag 37750063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 554
Target Start/End: Original strand, 1764944 - 1765017
Alignment:
Q  481 atggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    |||||||| || ||| |||||  ||||||||||||| ||| || |||||  ||||||||||||||| |||||||    
T  1764944 atggtggttggggttcgaaccccggatcttgcatattttatgcgttgttcatatcaactgagttaagctcacga 1765017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 28084351 - 28084279
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||| ||||||||| | | | |||||||||||||  |||||| | ||||||||||||||| ||||||||    
T  28084351 tggtggtcg-agtttgaacatcgaaccttgcatatattattcattgtctctatcaactgagttaagctcacgag 28084279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 29376971 - 29376898
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||| ||||||||    || |||||||||||||||||||||   || |||||||||||| ||||||||    
T  29376971 tggtggtcggggtttgaactccagaccttgcatatattacgcattgtccataccaactgagttaagctcacgag 29376898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 547
Target Start/End: Original strand, 35700386 - 35700451
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaa 547  Q
    ||||||||||||||||||||  | || |||||||||||| ||||||| | || ||||||| |||||    
T  35700386 tggtggtcggagtttgaaccccgaattttgcatatattatgcattgtctctaccaactgatttaaa 35700451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 549
Target Start/End: Original strand, 38489219 - 38489260
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaact 549  Q
    ||||||||||| | |||||||| |||||||||||||||||||    
T  38489219 cttgcatatatcatgcattgttcttatcaactgagttaaact 38489260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 555
Target Start/End: Complemental strand, 13286199 - 13286128
Alignment:
Q  483 ggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||| ||| |||||||||  ||||||||||||||||| ||||||| | || |||||||| ||| ||||||||    
T  13286199 ggtggccggggtttgaaccc-ggatcttgcatatattatgcattgtctataccaactgagctaagctcacgag 13286128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 552
Target Start/End: Original strand, 24695999 - 24696067
Alignment:
Q  484 gtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    |||||| | ||||||| || ||||||||||||||||| |||||||   ||||||||||| ||| |||||    
T  24695999 gtggtcagggtttgaatctcggatcttgcatatattatgcattgtccatatcaactgagataatctcac 24696067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 553
Target Start/End: Original strand, 42208471 - 42208531
Alignment:
Q  493 gtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    |||||||||| ||| ||||||||||||| |||||||  ||| |||||||| |||| |||||    
T  42208471 gtttgaacctcggaccttgcatatattatgcattgtccttaccaactgagctaaattcacg 42208531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 486 - 555
Target Start/End: Complemental strand, 25246837 - 25246768
Alignment:
Q  486 ggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||| ||||||||||  | ||||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  25246837 ggtcgaagtttgaacccagaatcttgcatatattatgcattgtctttatcaactgagctaaactcacgag 25246768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 482 - 554
Target Start/End: Original strand, 1285060 - 1285132
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    |||||||| ||| | |||||  ||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  1285060 tggtggtcagagctcgaaccccggatcttgcatatattatgcattgttcctatcaactgagttaaactcacga 1285132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 507 - 555
Target Start/End: Complemental strand, 3948099 - 3948051
Alignment:
Q  507 tcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  3948099 tcttgcatatattatgcattgtctctatcaactgagttaaactcacgag 3948051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 482 - 554
Target Start/End: Original strand, 22564133 - 22564205
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    |||||||| |||||||||||||| |  |||||||||||||| ||| ||  || ||||||||||||||||||||    
T  22564133 tggtggtcagagtttgaaccttgaactttgcatatattacgtattattcctaccaactgagttaaactcacga 22564205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 482 - 554
Target Start/End: Original strand, 28200376 - 28200448
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    ||||||||||||||||||||| | || |||||||||||| | ||||||  || |||||||||||| |||||||    
T  28200376 tggtggtcggagtttgaacctcgaattttgcatatattatgtattgttcctaccaactgagttaagctcacga 28200448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 480 - 555
Target Start/End: Complemental strand, 22267653 - 22267578
Alignment:
Q  480 tatggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||| |||| ||||||| | || ||||| ||||||||| ||||||| | || |||||||||||||||||||||    
T  22267653 tatggtgatcggggtttgaatcctgaatcttacatatattatgcattgtctctaccaactgagttaaactcacgag 22267578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 528
Target Start/End: Complemental strand, 18023749 - 18023703
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgt 528  Q
    |||||||||||||||||||| |||| ||||||||||||| |||||||    
T  18023749 tggtggtcggagtttgaaccctggaccttgcatatattatgcattgt 18023703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 480 - 550
Target Start/End: Original strand, 37307863 - 37307933
Alignment:
Q  480 tatggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactc 550  Q
    ||||||| ||||  ||||||| | ||||||||||||||||| ||||||||  ||||||||||| |||||||    
T  37307863 tatggtgctcgggatttgaacatcggatcttgcatatattatgcattgttcctatcaactgagctaaactc 37307933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 480 - 554
Target Start/End: Original strand, 44718802 - 44718876
Alignment:
Q  480 tatggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    |||||| |||| ||||||||||  | |||||||||||||||   ||||||| |||||| ||||||||||||||||    
T  44718802 tatggtagtcgaagtttgaaccccgaatcttgcatatattatatattgtttatatcaattgagttaaactcacga 44718876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 483 - 552
Target Start/End: Complemental strand, 19599214 - 19599145
Alignment:
Q  483 ggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    ||||||||| |||||||||  ||| ||||||||||||| |||||||   || ||||||||||||||||||    
T  19599214 ggtggtcggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagttaaactcac 19599145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 551
Target Start/End: Original strand, 41250038 - 41250107
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactca 551  Q
    ||||| |||| | |||||||| ||| |||||||||||||  ||||||| |||||||||||| ||||||||    
T  41250038 tggtgttcggggcttgaacctcggaccttgcatatattatacattgttcttatcaactgagctaaactca 41250107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 42829225 - 42829298
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||| |||||||||||||  ||| ||||||||||||| |||||||   |||||||||||| || ||||||||    
T  42829225 tggtggccggagtttgaaccccggagcttgcatatattatgcattgtccctatcaactgagtcaagctcacgag 42829298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 508 - 549
Target Start/End: Complemental strand, 45425497 - 45425456
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaact 549  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  45425497 cttgcatatattatgcattgtctttatcaactgagttaaact 45425456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 508 - 555
Target Start/End: Complemental strand, 34807263 - 34807215
Alignment:
Q  508 cttgcatatattacgcattgtt-tttatcaactgagttaaactcacgag 555  Q
    ||||||||||||| |||||||| ||||||||||||| ||||||||||||    
T  34807263 cttgcatatattatgcattgttctttatcaactgagctaaactcacgag 34807215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 508 - 555
Target Start/End: Original strand, 5458088 - 5458135
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||||||| |||||||| |||||||||||| ||| ||||||||    
T  5458088 cttgcatatattatgcattgttcttatcaactgagctaagctcacgag 5458135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 551
Target Start/End: Complemental strand, 44106692 - 44106629
Alignment:
Q  488 tcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactca 551  Q
    |||||||| |||||| |||  |||||||||||| | ||||| | ||||||||||||||||||||    
T  44106692 tcggagttcgaacctcggactttgcatatattatgtattgtctctatcaactgagttaaactca 44106629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 505 - 555
Target Start/End: Original strand, 9819563 - 9819613
Alignment:
Q  505 gatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||||||||| ||||||||  || |||||||| ||||||||||||    
T  9819563 gatcttgcatatattatgcattgttcctaccaactgagataaactcacgag 9819613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 505 - 555
Target Start/End: Original strand, 10721488 - 10721538
Alignment:
Q  505 gatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||||||||| ||||||||  || |||||||| ||||||||||||    
T  10721488 gatcttgcatatattatgcattgttcctaccaactgagataaactcacgag 10721538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Complemental strand, 19097650 - 19097608
Alignment:
Q  513 atatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||| | |||||||||||||||||||| |||||||||||||    
T  19097650 atatatcatgcattgtttttatcaactgaattaaactcacgag 19097608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 555
Target Start/End: Original strand, 23198743 - 23198813
Alignment:
Q  485 tggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||| |||||||||  |||  |||||||| ||| ||||||||  || |||||||||||||||||||||    
T  23198743 tggtcggggtttgaaccccggactttgcatattttatgcattgttcataccaactgagttaaactcacgag 23198813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 508 - 546
Target Start/End: Original strand, 27908737 - 27908775
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaa 546  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  27908737 cttgcatatattaagcattgtttctatcaactgagttaa 27908775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 555
Target Start/End: Original strand, 29734808 - 29734854
Alignment:
Q  509 ttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||||| ||||||||| |||| |||||| ||||||||||||    
T  29734808 ttgcatatattatgcattgtttctatcgactgagctaaactcacgag 29734854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 553
Target Start/End: Complemental strand, 33254222 - 33254177
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||||| |||||| ||||||||||| |||||||| ||||||||||    
T  33254222 cttgcatgtattacacattgtttttaccaactgagctaaactcacg 33254177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 553
Target Start/End: Complemental strand, 38911343 - 38911298
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    |||||||||||||  |||||| ||||||||||||||||| ||||||    
T  38911343 cttgcatatattatacattgtctttatcaactgagttaagctcacg 38911298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 552
Target Start/End: Original strand, 10236922 - 10236966
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    |||||||| |||| |||||||| ||| ||||||||||||||||||    
T  10236922 cttgcatacattatgcattgttcttaccaactgagttaaactcac 10236966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 554
Target Start/End: Complemental strand, 10242550 - 10242479
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    ||||| |||| ||||||||| |||| ||||||||||||| ||||| | | || |||||||||||| |||||||    
T  10242550 tggtgatcggggtttgaaccctggaccttgcatatattatgcatt-tatctaccaactgagttaagctcacga 10242479  T

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Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 526
Target Start/End: Original strand, 26717919 - 26717963
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcatt 526  Q
    |||||||| ||||||||||| |||| ||||||||||||| |||||    
T  26717919 tggtggtcagagtttgaaccctggaccttgcatatattatgcatt 26717963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 526
Target Start/End: Original strand, 37495909 - 37495953
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcatt 526  Q
    ||||||||||  ||||||||||||| ||||||||||||| |||||    
T  37495909 tggtggtcgggatttgaaccttggaccttgcatatattatgcatt 37495953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 485 - 555
Target Start/End: Original strand, 41168132 - 41168202
Alignment:
Q  485 tggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||||||||||||||| |||| |||||||| ||||||||  ||||||| ||||||| || |||||    
T  41168132 tggtcggagtttgaaccttggagcttgtatatattatgcattgttcctatcaaccgagttaagcttacgag 41168202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 552
Target Start/End: Original strand, 5428438 - 5428497
Alignment:
Q  493 gtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    ||||||| | |||| ||||||||||||| |||||||||||||||| |||| |||||||||    
T  5428438 gtttgaatcctggaccttgcatatattatgcattgtttttatcaattgagctaaactcac 5428497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 482 - 553
Target Start/End: Original strand, 51882191 - 51882262
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    |||||| ||| ||||||||| |||||||||||||||||| |||||||   || |||||||||||| ||||||    
T  51882191 tggtggccggggtttgaaccctggatcttgcatatattatgcattgtccataccaactgagttaagctcacg 51882262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 31138486 - 31138414
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||| |||||||||| | ||||||||||||||| ||||||| | ||||||||||| ||| || |||||    
T  31138486 tggtggtcggggtttgaacctag-atcttgcatatattatgcattgtctctatcaactgagataagcttacgag 31138414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 508 - 555
Target Start/End: Complemental strand, 7824851 - 7824804
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||||||| | ||||| | ||||||||||||||||||||||||    
T  7824851 cttgcatatattatgtattgtctatatcaactgagttaaactcacgag 7824804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 525
Target Start/End: Original strand, 8136623 - 8136666
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcat 525  Q
    |||||||||| |||||||||||||| ||||||||||||| ||||    
T  8136623 tggtggtcggggtttgaaccttggaccttgcatatattatgcat 8136666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 553
Target Start/End: Original strand, 10922299 - 10922370
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    |||| ||||| |||||||||  ||||||||||||||||| |||||||   || |||||||||||| ||||||    
T  10922299 tggtagtcggggtttgaaccccggatcttgcatatattatgcattgtccctaccaactgagttaagctcacg 10922370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 553
Target Start/End: Complemental strand, 22486729 - 22486682
Alignment:
Q  506 atcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||||||||||||| |||||||| ||| |||||||||||| ||||||    
T  22486729 atcttgcatatattatgcattgttcttaccaactgagttaagctcacg 22486682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 554
Target Start/End: Complemental strand, 48517736 - 48517669
Alignment:
Q  487 gtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    ||||||||||||||   | | |||| |||||||| ||||||||  |||||||||||||||||||||||    
T  48517736 gtcggagtttgaactccgaaccttgtatatattatgcattgttcctatcaactgagttaaactcacga 48517669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 555
Target Start/End: Complemental strand, 5349587 - 5349525
Alignment:
Q  493 gtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||| ||| ||||||||||| | |||||||  ||| ||| |||||||||||||||||    
T  5349587 gtttgaacctcggaccttgcatatataatgcattgtccttaccaagtgagttaaactcacgag 5349525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 24120411 - 24120485
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgca-ttgtttttatcaactgagttaaactcacgag 555  Q
    ||||| ||||||||||||||  ||||||||||||||||| ||| |||| | || |||||||| ||| ||||||||    
T  24120411 tggtgatcggagtttgaaccgcggatcttgcatatattatgcatttgtctctaccaactgagctaagctcacgag 24120485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 512 - 554
Target Start/End: Complemental strand, 29791816 - 29791774
Alignment:
Q  512 catatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    ||||||||| | ||||||| |||||||||||||||||||||||    
T  29791816 catatattatgtattgtttctatcaactgagttaaactcacga 29791774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 555
Target Start/End: Complemental strand, 46903971 - 46903905
Alignment:
Q  489 cggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||||||| |||| ||| ||||||||| |||||||   || |||||||||||| ||||||||    
T  46903971 cggagtttgaaccctggaccttacatatattatgcattgtccataccaactgagttaatctcacgag 46903905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 528
Target Start/End: Original strand, 48944347 - 48944392
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgt 528  Q
    |||||||||||||||||||| | |||||||||||||||| |||||||    
T  48944347 tggtggtcggagtttgaaccct-gatcttgcatatattatgcattgt 48944392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 7464482 - 7464555
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||| |||||||||  ||| ||| ||||||||| |||||||   || |||||||||||| ||||||||    
T  7464482 tggtggtcggggtttgaaccccggaccttacatatattatgcattgtccctaccaactgagttaagctcacgag 7464555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 7829966 - 7829893
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||||| || |||| |  || ||| ||||||||| |||||||   ||||||||||||||||||||||||    
T  7829966 tggtggtcggatttcgaacttcagaccttacatatattatgcattgtccatatcaactgagttaaactcacgag 7829893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 553
Target Start/End: Original strand, 12976619 - 12976664
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||||||||||| |||||||   ||||||||||||||||||||||    
T  12976619 cttgcatatattatgcattgtccctatcaactgagttaaactcacg 12976664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 529
Target Start/End: Complemental strand, 24348455 - 24348410
Alignment:
Q  484 gtggtcggagtttgaaccttggatcttgcatatattacgcattgtt 529  Q
    |||||||||||||||||||  || ||||||||||||| ||||||||    
T  24348455 gtggtcggagtttgaacctctgaccttgcatatattatgcattgtt 24348410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 28430556 - 28430629
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||| ||||||||||||  || ||||||||||||| ||||||||  || ||||||| |||| ||| ||||    
T  28430556 tggtggtcagagtttgaacctcagaccttgcatatattatgcattgttcgtaccaactgaattaagctcgcgag 28430629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 554
Target Start/End: Complemental strand, 32484337 - 32484276
Alignment:
Q  493 gtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    |||||||||  ||||||||||||| ||| |||||||   || ||||||||||||||||||||    
T  32484337 gtttgaaccccggatcttgcatattttaagcattgtccataccaactgagttaaactcacga 32484276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 553
Target Start/End: Complemental strand, 2563988 - 2563928
Alignment:
Q  493 gtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    |||||||||| | | ||| |||||||||  |||| ||||||||||||||||||| ||||||    
T  2563988 gtttgaacctcgaaccttacatatattattcattatttttatcaactgagttaagctcacg 2563928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 17588409 - 17588361
Alignment:
Q  505 gatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    |||||||||||||||| |||||||  ||| |||||||||||| ||||||    
T  17588409 gatcttgcatatattatgcattgtccttaccaactgagttaagctcacg 17588361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 552
Target Start/End: Original strand, 38573590 - 38573634
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    |||| |||||||| |||||||| |||||||||||||||| |||||    
T  38573590 cttgtatatattatgcattgttcttatcaactgagttaagctcac 38573634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000003; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 8544980 - 8545053
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||||||| ||||   ||| ||||||||||||| |||||||  |||||||||||||||| ||||||||    
T  8544980 tggtggtcggagttcgaactccggaccttgcatatattatgcattgtccttatcaactgagttaagctcacgag 8545053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 480 - 541
Target Start/End: Complemental strand, 20206587 - 20206526
Alignment:
Q  480 tatggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactga 541  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||||| | || |||||||    
T  20206587 tatggtggtcggagtttcaaccttagatcttgcatatattatgcattgtctctaccaactga 20206526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 494 - 555
Target Start/End: Complemental strand, 40446041 - 40445980
Alignment:
Q  494 tttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||  || ||||||||||||| |||||||  |||||||||||||||||||||||||    
T  40446041 tttgaacctcagaccttgcatatattatgcattgtccttatcaactgagttaaactcacgag 40445980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 480 - 555
Target Start/End: Original strand, 5107234 - 5107309
Alignment:
Q  480 tatggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||||| ||| |||||| ||| ||||||||||||| ||||| ||  || |||||||||||| ||||||||    
T  5107234 tatggtggtcggggttcgaacctcggaccttgcatatattatgcattattcataccaactgagttaagctcacgag 5107309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 480 - 555
Target Start/End: Complemental strand, 27903185 - 27903110
Alignment:
Q  480 tatggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||||||||||||||||  | | ||||||||||||| ||||||||  || |||||||  ||||||||||||    
T  27903185 tatggtggtcggagtttgaaccccgaaccttgcatatattatgcattgttcataccaactgaactaaactcacgag 27903110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 552
Target Start/End: Original strand, 1538799 - 1538869
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    |||||||||| |||||||||| ||| ||||||||||||| || |||||| || ||| |||||||| |||||    
T  1538799 tggtggtcggcgtttgaacctcggaccttgcatatattatgcgttgtttataccaattgagttaagctcac 1538869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 13796400 - 13796327
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||||||||| |||   || ||||||||||||| ||||||||  |||| |||||||||| ||||||||    
T  13796400 tggtggtcggagtttgtaccccagaccttgcatatattatgcattgttcatatcgactgagttaagctcacgag 13796327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 13864414 - 13864341
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||| |||||||||  ||| ||||||||||||| | ||||||  || |||||||||||| ||||||||    
T  13864414 tggtggtcggggtttgaaccccggaccttgcatatattatgtattgttcataccaactgagttaagctcacgag 13864341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 508 - 553
Target Start/End: Original strand, 18278276 - 18278321
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||||||||||| |||||||| ||| |||||||||||||||||||    
T  18278276 cttgcatatattatgcattgttcttaccaactgagttaaactcacg 18278321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 508 - 553
Target Start/End: Complemental strand, 34206271 - 34206226
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||||    
T  34206271 cttgcatatattatgcattgtctttaccaactgagttaaactcacg 34206226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 553
Target Start/End: Complemental strand, 20211712 - 20211672
Alignment:
Q  513 atatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  20211712 atatattatgcattgtttttatcaactgagttgaactcacg 20211672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 553
Target Start/End: Complemental strand, 22394097 - 22394034
Alignment:
Q  490 ggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||||||||||| ||||||| ||||||||| |||||||   ||||||||||| ||| ||||||    
T  22394097 ggagtttgaacctcggatcttacatatattatgcattgtccatatcaactgagctaagctcacg 22394034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 498 - 541
Target Start/End: Complemental strand, 25709787 - 25709744
Alignment:
Q  498 aaccttggatcttgcatatattacgcattgtttttatcaactga 541  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||||    
T  25709787 aacctcggaccttgcatatattatgcattgtttttatcaactga 25709744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 508 - 555
Target Start/End: Original strand, 36623191 - 36623238
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||||||| ||||| || |||||||||||||||| ||||||||    
T  36623191 cttgcatatattatgcattattcttatcaactgagttaagctcacgag 36623238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 508 - 554
Target Start/End: Complemental strand, 7713576 - 7713530
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    ||||||||||||| ||||| ||  |||||||||||||||||||||||    
T  7713576 cttgcatatattatgcattattcatatcaactgagttaaactcacga 7713530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 497 - 551
Target Start/End: Complemental strand, 31159484 - 31159430
Alignment:
Q  497 gaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactca 551  Q
    ||||| || ||||||||||||||| | ||||| ||||||||||||||||| ||||    
T  31159484 gaaccctgaatcttgcatatattatgtattgtctttatcaactgagttaagctca 31159430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 511 - 553
Target Start/End: Original strand, 39917904 - 39917946
Alignment:
Q  511 gcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    |||||||||| |||||||| ||| |||||||||||||||||||    
T  39917904 gcatatattatgcattgttcttaccaactgagttaaactcacg 39917946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 542
Target Start/End: Complemental strand, 1642381 - 1642344
Alignment:
Q  505 gatcttgcatatattacgcattgtttttatcaactgag 542  Q
    |||||||||||||||| |||||||||||| ||||||||    
T  1642381 gatcttgcatatattatgcattgtttttaccaactgag 1642344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 553
Target Start/End: Original strand, 8639346 - 8639391
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    |||||||||||||| ||||||  |||||||||||||||| ||||||    
T  8639346 cttgcatatattacacattgtccttatcaactgagttaagctcacg 8639391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 554
Target Start/End: Complemental strand, 13409617 - 13409548
Alignment:
Q  485 tggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    ||||||| ||||||||   ||| |||| |||||||| |||||||| |||||||||||| |||||| ||||    
T  13409617 tggtcggggtttgaactccggaccttgtatatattatgcattgttcttatcaactgagctaaacttacga 13409548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 15889481 - 15889408
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||| ||||||||| | || ||||||||||||| |||||||   || |||||||| ||| ||||||||    
T  15889481 tggtggtcggggtttgaaccctagaccttgcatatattatgcattgtccctaccaactgagctaagctcacgag 15889408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 523 - 555
Target Start/End: Complemental strand, 7671260 - 7671228
Alignment:
Q  523 cattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||| ||||||||||||||||||||||||    
T  7671260 cattgtttctatcaactgagttaaactcacgag 7671228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 552
Target Start/End: Original strand, 9123858 - 9123906
Alignment:
Q  504 ggatcttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    ||||||| ||||||||| ||||||| |||| |||||||||||| |||||    
T  9123858 ggatcttacatatattatgcattgtctttaccaactgagttaagctcac 9123906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 546
Target Start/End: Original strand, 16579365 - 16579429
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaa 546  Q
    |||||||| | |||||||||  ||| ||||||||||||| ||||||||  || ||||||||||||    
T  16579365 tggtggtcagggtttgaaccacggaccttgcatatattatgcattgttcataccaactgagttaa 16579429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 495 - 551
Target Start/End: Complemental strand, 18147775 - 18147719
Alignment:
Q  495 ttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactca 551  Q
    |||||||  ||||| ||||||||||| |||||||  |||||||||||| ||||||||    
T  18147775 ttgaaccccggatcctgcatatattatgcattgtccttatcaactgagctaaactca 18147719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 553
Target Start/End: Complemental strand, 35109455 - 35109399
Alignment:
Q  497 gaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    |||||| ||| ||||||||||||| | ||||| |||| |||||||||||| ||||||    
T  35109455 gaacctcggaccttgcatatattatgtattgtctttaccaactgagttaagctcacg 35109399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 526
Target Start/End: Original strand, 37021363 - 37021407
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcatt 526  Q
    |||||||||| ||||||||| || ||||||||||||||| |||||    
T  37021363 tggtggtcggggtttgaaccctgaatcttgcatatattatgcatt 37021407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 554
Target Start/End: Original strand, 41650931 - 41651002
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    |||||||||| |||||||| | ||| ||||||||||||| |||||||   || |||||||||||| |||||||    
T  41650931 tggtggtcggtgtttgaac-tcggaccttgcatatattatgcattgtccataccaactgagttaagctcacga 41651002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 508 - 553
Target Start/End: Original strand, 31401670 - 31401715
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  31401670 cttgcatatattatgcattgtttttgtcaactgagttaaactcacg 31401715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 497 - 552
Target Start/End: Complemental strand, 24631894 - 24631839
Alignment:
Q  497 gaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    |||||||||||||||||||||||| ||||| |  ||| ||||||||||||||||||    
T  24631894 gaaccttggatcttgcatatattatgcattatccttaccaactgagttaaactcac 24631839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 25364995 - 25365058
Alignment:
Q  490 ggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    |||||||||| ||  |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  25364995 ggagtttgaatctgagatcttgcatatattatgcattgttcttaccaactgagttaaattcacg 25365058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 506 - 553
Target Start/End: Original strand, 47835730 - 47835777
Alignment:
Q  506 atcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    |||||| |||||||| | ||||||||||||||||||||||||||||||    
T  47835730 atcttgtatatattatgtattgtttttatcaactgagttaaactcacg 47835777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 555
Target Start/End: Complemental strand, 3431401 - 3431327
Alignment:
Q  481 atggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||||| |||||||||| | |  |||||||||||| ||||| ||  || |||||||||||||||||||||    
T  3431401 atggtggtcggggtttgaacctcgtacattgcatatattatgcattcttcctaccaactgagttaaactcacgag 3431327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 14905407 - 14905480
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||| ||||| | |||||| | ||||||| ||||||||| | ||||||| || |||||||||||||||||||||    
T  14905407 tggtagtcggggattgaacatcggatcttacatatattaagtattgtttctaccaactgagttaaactcacgag 14905480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 16475904 - 16475977
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||| || |||||||||||||| ||| ||||||||| | ||||||  || ||||| |||||||||||||||    
T  16475904 tggtggttggggtttgaaccttggaccttacatatattatgtattgttcctaccaactaagttaaactcacgag 16475977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 483 - 552
Target Start/End: Complemental strand, 34848545 - 34848476
Alignment:
Q  483 ggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    |||||||| |||||||||||  || ||||||||||||| | ||||| ||| |||||| ||||||||||||    
T  34848545 ggtggtcgaagtttgaacctcagaccttgcatatattatgaattgtctttgtcaactaagttaaactcac 34848476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 553
Target Start/End: Original strand, 6000145 - 6000205
Alignment:
Q  493 gtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    |||||||||| ||| ||||||||||||| |||||||  | | |||||||||||||||||||    
T  6000145 gtttgaacctcggaccttgcatatattatgcattgtcctaaccaactgagttaaactcacg 6000205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 552
Target Start/End: Original strand, 10654449 - 10654509
Alignment:
Q  493 gtttgaaccttggatcttgcatatattacgcattgt-ttttatcaactgagttaaactcac 552  Q
    |||||||||  ||| ||||||||||||| ||||||| |||||||||||||||||| |||||    
T  10654449 gtttgaaccacggaccttgcatatattatgcattgtcttttatcaactgagttaagctcac 10654509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 553
Target Start/End: Original strand, 17221526 - 17221582
Alignment:
Q  497 gaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    |||||| ||| ||||||||||||| |||||||| ||| ||||| |||||||||||||    
T  17221526 gaacctcggaccttgcatatattatgcattgttcttaccaacttagttaaactcacg 17221582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 553
Target Start/End: Original strand, 29441872 - 29441943
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    |||||||||||||||||| || ||||||||||||||| | | ||||||  ||  ||||||| ||||||||||    
T  29441872 tggtggtcggagtttgaatctcggatcttgcatatatcatgtattgttcctactaactgagctaaactcacg 29441943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 553
Target Start/End: Original strand, 32950752 - 32950823
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    |||||||||  ||||||||   ||| ||||||||||||| ||||||||| || |||||||||||| ||||||    
T  32950752 tggtggtcgaggtttgaactccggaccttgcatatattatgcattgtttataccaactgagttaagctcacg 32950823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 545
Target Start/End: Complemental strand, 32962633 - 32962570
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagtta 545  Q
    |||||||||| ||||||||| |||| ||||||||| ||| ||||||||  || |||||||||||    
T  32962633 tggtggtcggggtttgaaccctggaccttgcatattttatgcattgttcataccaactgagtta 32962570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Complemental strand, 40618955 - 40618908
Alignment:
Q  507 tcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    |||||||||||||| ||||| | |||| ||||||||||||||||||||    
T  40618955 tcttgcatatattatgcattatctttaccaactgagttaaactcacga 40618908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 547
Target Start/End: Complemental strand, 17683777 - 17683743
Alignment:
Q  513 atatattacgcattgtttttatcaactgagttaaa 547  Q
    |||||||| ||||||||||||||||||||||||||    
T  17683777 atatattatgcattgtttttatcaactgagttaaa 17683743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 552
Target Start/End: Original strand, 28832162 - 28832232
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    ||||||||||  |||||||||  || ||||||||||||| ||||||||  || |||||||||||| |||||    
T  28832162 tggtggtcgggatttgaacctcagaccttgcatatattatgcattgttcataccaactgagttaagctcac 28832232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 497 - 555
Target Start/End: Complemental strand, 30795756 - 30795698
Alignment:
Q  497 gaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||| ||||||||||||| |||||||| ||| |||||||| |||  |||||||    
T  30795756 gaaccttggaccttgcatatattatgcattgttcttaccaactgagctaagttcacgag 30795698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 555
Target Start/End: Complemental strand, 34877730 - 34877668
Alignment:
Q  493 gtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||| ||  ||||||||| ||| ||||||| | |||||| |||||||||||||||||    
T  34877730 gtttgaacctcgggccttgcatattttatgcattgtctctatcaattgagttaaactcacgag 34877668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 508 - 546
Target Start/End: Original strand, 41711727 - 41711765
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaa 546  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  41711727 cttgcatatattatgcattgttcttatcaactgagttaa 41711765  T

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Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 1091249 - 1091176
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||| |||||||||||  | | |||||||| |||| ||||||| | || |||||||||||| ||||||||    
T  1091249 tggtggtcagagtttgaaccccgaaccttgcatacattatgcattgtctataccaactgagttaagctcacgag 1091176  T

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Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 554
Target Start/End: Original strand, 7574120 - 7574181
Alignment:
Q  493 gtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    ||||||||| | || |||||||||| || |||||||  ||| ||||||||||||||||||||    
T  7574120 gtttgaaccattgaccttgcatatactatgcattgtccttaccaactgagttaaactcacga 7574181  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 555
Target Start/End: Complemental strand, 8153181 - 8153132
Alignment:
Q  506 atcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||| ||||||||| ||||||| | || |||||||||||||||||||||    
T  8153181 atcttacatatattatgcattgtctataccaactgagttaaactcacgag 8153132  T

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Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 16033441 - 16033514
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||| |||||||||||||   || ||||||||||||| |||||||   |||||||||||| || ||||||||    
T  16033441 tggtggccggagtttgaaccccagaccttgcatatattatgcattgtccctatcaactgagtcaagctcacgag 16033514  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 555
Target Start/End: Complemental strand, 34632227 - 34632166
Alignment:
Q  494 tttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||| |||||||||||||||||  |||||| | || |||||||| ||| ||||||||    
T  34632227 tttgaacctcggatcttgcatatattatacattgtctataccaactgagctaagctcacgag 34632166  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 44243943 - 44243870
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||| || ||||||||  |||| ||| ||||||||| ||||||||  || |||||||| ||||||||||||    
T  44243943 tggtggttggggtttgaactctggaccttacatatattatgcattgttcctaccaactgagctaaactcacgag 44243870  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 555
Target Start/End: Complemental strand, 49222878 - 49222813
Alignment:
Q  490 ggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||||||  ||| ||||||||||||  ||||||||  |||||| |||||||| ||||||||    
T  49222878 ggagtttgaaccccggaccttgcatatattgtgcattgttcctatcaattgagttaagctcacgag 49222813  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 551
Target Start/End: Original strand, 52262157 - 52262226
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactca 551  Q
    ||||||||||||||||||||| | |  |||||||| ||| ||||||||  || |||||||||||| ||||    
T  52262157 tggtggtcggagtttgaacctcgaactttgcatattttatgcattgttcataccaactgagttaagctca 52262226  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 552
Target Start/End: Original strand, 3393585 - 3393629
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcac 552  Q
    ||||||||||||| ||||||||  ||||||||||| |||||||||    
T  3393585 cttgcatatattatgcattgttcatatcaactgagctaaactcac 3393629  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 546
Target Start/End: Original strand, 9616888 - 9616944
Alignment:
Q  490 ggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaa 546  Q
    ||||||||||||  ||| |||| |||||||| ||||||||| || ||||||||||||    
T  9616888 ggagtttgaaccgcggaccttgtatatattatgcattgtttctagcaactgagttaa 9616944  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 554
Target Start/End: Original strand, 16967185 - 16967257
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    |||||| |||||||||||||| | | ||||||||||||| |||||||   |||||||| || ||| |||||||    
T  16967185 tggtggccggagtttgaacctcgaaccttgcatatattatgcattgtccatatcaactaagctaagctcacga 16967257  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 554
Target Start/End: Original strand, 39252248 - 39252320
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    ||||||| |||||||||||| |||| ||| ||||||||| | |||||   ||||||||||| ||| |||||||    
T  39252248 tggtggttggagtttgaaccctggaccttacatatattatgtattgtcgatatcaactgagctaagctcacga 39252320  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 555
Target Start/End: Original strand, 49875611 - 49875663
Alignment:
Q  503 tggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||| ||||||||||||| |||||||  ||| |||||||||||| ||||||||    
T  49875611 tggaccttgcatatattatgcattgtccttaccaactgagttaagctcacgag 49875663  T

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Target: scaffold0122 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 14177 - 14250
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||||||||| |||||||||    | ||||||||||||| ||||||||  || |||||||||||||||||||||    
T  14177 tggtggtcggggtttgaaccacataccttgcatatattatgcattgttcataccaactgagttaaactcacgag 14250  T

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Target: scaffold0088 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 508 - 555
Target Start/End: Complemental strand, 48065 - 48018
Alignment:
Q  508 cttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    ||||||||||||| ||||| |  |||||||||||||||||||||||||    
T  48065 cttgcatatattatgcattatgcttatcaactgagttaaactcacgag 48018  T

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Target: scaffold0028 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 528
Target Start/End: Original strand, 72771 - 72812
Alignment:
Q  487 gtcggagtttgaaccttggatcttgcatatattacgcattgt 528  Q
    ||||||||||||||| |||| ||||||||||||| |||||||    
T  72771 gtcggagtttgaaccctggaccttgcatatattatgcattgt 72812  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 99107 - 99034
Alignment:
Q  482 tggtggtcggagtttgaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacgag 555  Q
    |||| |||||||||||||||   || ||||||||||||| |||||||   |||||||||||| || ||||||||    
T  99107 tggttgtcggagtttgaaccccagaccttgcatatattatgcattgtccctatcaactgagtcaagctcacgag 99034  T

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Target: scaffold0533 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 554
Target Start/End: Original strand, 8842 - 8914
Alignment:
Q  483 ggtggtcggagtttgaacct-tggatcttgcatatattacgcattgtttttatcaactgagttaaactcacga 554  Q
    |||| |||||||| |||||  |||||||||||||||||| |||||||  ||| ||| |||||||| |||||||    
T  8842 ggtgttcggagttcgaacccctggatcttgcatatattatgcattgtccttaccaattgagttaagctcacga 8914  T

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Target: scaffold0238 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 553
Target Start/End: Complemental strand, 25444 - 25388
Alignment:
Q  497 gaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||| |||| ||||||||||||| |||||||  ||| |||||||||||| ||||||    
T  25444 gaaccctggaccttgcatatattatgcattgtccttaccaactgagttaagctcacg 25388  T

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Target: scaffold0126 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 553
Target Start/End: Original strand, 34894 - 34950
Alignment:
Q  497 gaaccttggatcttgcatatattacgcattgtttttatcaactgagttaaactcacg 553  Q
    ||||| |||| ||||||||||||| |||||||  ||| |||||||||||| ||||||    
T  34894 gaaccctggaccttgcatatattatgcattgtccttaccaactgagttaagctcacg 34950  T

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