View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4431-Insertion-3 (Length: 579)
Name: NF4431-Insertion-3
Description: NF4431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4431-Insertion-3 |
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Alignment Details
Target: chr2 (Bit Score: 514; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 514; E-Value: 0
Query Start/End: Original strand, 8 - 533
Target Start/End: Original strand, 39246680 - 39247205
Alignment:
| Q |
8 |
gttttagtcagcttcaagagtcgacattaaaatcctcaaataccactacacattcaagctcatcaagcatagtagctcccactttacagcacattgtcca |
107 |
Q |
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| T |
39246680 |
gttttagtcagcttcaagagtcgacattaaaatcctcaaataccactacacattcaagctcatcaagcatagtagctcccactttacagcacattgtcca |
39246779 |
T |
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| Q |
108 |
actaattcaaatcaagtttatcacattcacatggcaaacacacaaataactatatttgcgctaataatcttcaccaccttcttgttcatgacattgcaag |
207 |
Q |
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| T |
39246780 |
actaattcaaatcaagtttatcacattcacatggcaaacacacaaataactatatttgcgctaataatcttcaccaccttcttgttcatgacattgcaag |
39246879 |
T |
|
| Q |
208 |
ctcgtactctccaacgccaccccttcactagagaaaaaagcaatgttgttagtcatcatgtgcttttttacaaattagtttctgatctatcgaagaatat |
307 |
Q |
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| T |
39246880 |
ctcgtactctccaaccccaccccttcactagagaaaaaagcaatgttgttagtcatcatgtgctttttcacaaattagtttctgatctatcgaagaatat |
39246979 |
T |
|
| Q |
308 |
acataatattggtgatgttgctgatgccactcacgaggatgcaaatcaacatagattatcaccagggggaccagatcctcatcatcatgcaggtccacaa |
407 |
Q |
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| T |
39246980 |
acataatattggtgatgttgctgatgccactcacgaggatgcaaatcaacatagattatcaccagggggaccagatcctcatcatcatgcaggtccacaa |
39247079 |
T |
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| Q |
408 |
aacaagtagctatatatataactctctcgttatataatagaaatattttccaaaaagttgggtagtcaacttatcagttatcagccaccgttgatttgtt |
507 |
Q |
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| T |
39247080 |
aacaagtagctatatatataactctctcgttatataatagaaatattttccaaaaagttgggtagtcaacttatcagttatcagccactgttgatttgtt |
39247179 |
T |
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| Q |
508 |
ggtatgtcttaagaacagaactagta |
533 |
Q |
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| T |
39247180 |
ggtatgtcttaagaacagaactagta |
39247205 |
T |
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