View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4431_high_3 (Length: 320)
Name: NF4431_high_3
Description: NF4431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4431_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 41125936 - 41126244
Alignment:
| Q |
1 |
atctcctcatcctttttgttttgatatcaccgccaacactttccaacatattccagaaaccagaatggagatatggttcatcgtcttagtttctgtatgt |
100 |
Q |
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| T |
41125936 |
atctcctcatcctttttgttttgatatcaccgccaacactttccaacatattccagaaaccagaatggagacatggttcatcgtcttattttctgtatgt |
41126035 |
T |
|
| Q |
101 |
gtgtgttggttgatcaaagccaccctctccatcactgctaagagtgtaagcctccctcctggccctccacacatacctatcatcacacccctcttatggc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41126036 |
gtgtgttggttgatcaaagccaccctctccatcactactaagagtgtaagcctccctcctggccctccacacatacctatcatcacacccctcttatggc |
41126135 |
T |
|
| Q |
201 |
ttagaaaatcattcgcccaaacccaacttgtaccctttcttcgaaccctacatgcaaaacatggtccaataattagtcttcaaatcattttccgtcgaat |
300 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41126136 |
ttagaaaatcattcacccaaacccaacttgtaccctttcttcgaaccctacatgcaaaacatggtccaataattagtcttcaaatcattttccgtcgaat |
41126235 |
T |
|
| Q |
301 |
cgtattcat |
309 |
Q |
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||||||||| |
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| T |
41126236 |
cgtattcat |
41126244 |
T |
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