View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4432-Insertion-7 (Length: 758)

Name: NF4432-Insertion-7
Description: NF4432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4432-Insertion-7
NF4432-Insertion-7
[»] chr7 (36 HSPs)
chr7 (16-132)||(10210039-10210155)
chr7 (526-611)||(34333282-34333366)
chr7 (526-612)||(29993591-29993676)
chr7 (526-611)||(12218540-12218624)
chr7 (528-609)||(24438477-24438557)
chr7 (526-610)||(5239284-5239367)
chr7 (526-610)||(27456217-27456299)
chr7 (526-609)||(8754689-8754771)
chr7 (526-609)||(34606261-34606343)
chr7 (526-612)||(4628563-4628648)
chr7 (526-612)||(34546418-34546503)
chr7 (526-611)||(18485959-18486043)
chr7 (526-611)||(24798507-24798590)
chr7 (524-609)||(43594138-43594222)
chr7 (529-609)||(1736980-1737059)
chr7 (526-589)||(30810675-30810737)
chr7 (526-608)||(28587911-28587991)
chr7 (526-608)||(47656981-47657062)
chr7 (529-611)||(5729344-5729425)
chr7 (539-616)||(22973591-22973667)
chr7 (526-575)||(45045803-45045852)
chr7 (526-575)||(47083088-47083137)
chr7 (526-606)||(11686428-11686507)
chr7 (526-610)||(47839492-47839574)
chr7 (541-606)||(28262034-28262098)
chr7 (526-575)||(42044397-42044446)
chr7 (526-609)||(18470043-18470126)
chr7 (528-615)||(37631648-37631734)
chr7 (526-575)||(23363271-23363320)
chr7 (575-611)||(6097334-6097370)
chr7 (526-614)||(7689304-7689391)
chr7 (526-558)||(37674208-37674240)
chr7 (529-564)||(4087667-4087702)
chr7 (526-568)||(18117183-18117225)
chr7 (575-609)||(30703689-30703723)
chr7 (526-563)||(22739868-22739905)
[»] chr3 (44 HSPs)
chr3 (526-613)||(52520677-52520763)
chr3 (526-609)||(39074419-39074501)
chr3 (526-610)||(272219-272302)
chr3 (526-612)||(46352631-46352716)
chr3 (526-610)||(49893330-49893413)
chr3 (526-609)||(43786871-43786953)
chr3 (667-734)||(8195409-8195476)
chr3 (526-609)||(20923992-20924074)
chr3 (526-609)||(48725271-48725353)
chr3 (526-612)||(18014669-18014754)
chr3 (526-611)||(40362684-40362768)
chr3 (525-610)||(41304004-41304088)
chr3 (524-609)||(52246582-52246666)
chr3 (526-614)||(53489928-53490017)
chr3 (526-611)||(858587-858671)
chr3 (524-609)||(28139309-28139393)
chr3 (667-739)||(1412174-1412246)
chr3 (526-609)||(4168183-4168265)
chr3 (526-606)||(41554044-41554122)
chr3 (527-609)||(2119431-2119512)
chr3 (524-605)||(7468417-7468495)
chr3 (526-608)||(42964353-42964434)
chr3 (526-611)||(13159895-13159979)
chr3 (527-606)||(50359291-50359368)
chr3 (526-603)||(50395666-50395742)
chr3 (509-611)||(52718166-52718268)
chr3 (528-568)||(42548135-42548175)
chr3 (527-586)||(2391630-2391688)
chr3 (527-586)||(2393391-2393449)
chr3 (526-609)||(10617388-10617469)
chr3 (528-607)||(43269845-43269923)
chr3 (529-611)||(11308317-11308398)
chr3 (529-609)||(23925280-23925359)
chr3 (538-609)||(27994416-27994486)
chr3 (528-575)||(29241670-29241717)
chr3 (526-568)||(2505389-2505431)
chr3 (548-609)||(2362801-2362861)
chr3 (526-575)||(22248919-22248968)
chr3 (524-556)||(33140937-33140969)
chr3 (528-564)||(41993725-41993761)
chr3 (530-564)||(26966540-26966574)
chr3 (614-655)||(15214900-15214940)
chr3 (614-655)||(15254119-15254159)
chr3 (526-609)||(38852216-38852299)
[»] chr6 (37 HSPs)
chr6 (526-614)||(3515761-3515848)
chr6 (526-609)||(392096-392178)
chr6 (526-610)||(27433491-27433574)
chr6 (526-611)||(20897946-20898030)
chr6 (526-614)||(32929612-32929699)
chr6 (526-611)||(4215693-4215777)
chr6 (524-615)||(3026111-3026199)
chr6 (530-614)||(12525714-12525797)
chr6 (526-607)||(2350654-2350734)
chr6 (526-611)||(23402136-23402220)
chr6 (526-611)||(34396631-34396715)
chr6 (526-609)||(12145221-12145303)
chr6 (524-610)||(31280320-31280405)
chr6 (526-611)||(7851263-7851347)
chr6 (528-609)||(21878453-21878533)
chr6 (524-611)||(1391280-1391365)
chr6 (526-609)||(35043890-35043972)
chr6 (526-610)||(13529454-13529537)
chr6 (526-610)||(29451219-29451301)
chr6 (524-607)||(9660988-9661070)
chr6 (526-612)||(18276719-18276803)
chr6 (526-606)||(32985297-32985376)
chr6 (526-590)||(34477654-34477717)
chr6 (526-605)||(34851953-34852030)
chr6 (528-609)||(2580952-2581032)
chr6 (526-575)||(26467228-26467277)
chr6 (526-609)||(23629680-23629761)
chr6 (526-575)||(25165517-25165566)
chr6 (528-609)||(29978233-29978312)
chr6 (526-609)||(13417066-13417148)
chr6 (537-611)||(14559920-14559993)
chr6 (526-595)||(11115199-11115267)
chr6 (526-566)||(961051-961091)
chr6 (530-607)||(22021633-22021710)
chr6 (575-613)||(34706716-34706754)
chr6 (575-609)||(34712278-34712312)
chr6 (612-657)||(21686117-21686161)
[»] chr8 (52 HSPs)
chr8 (526-609)||(30675676-30675758)
chr8 (526-612)||(168463-168548)
chr8 (611-739)||(29781131-29781259)
chr8 (612-734)||(510217-510339)
chr8 (528-614)||(13643007-13643092)
chr8 (528-614)||(13743432-13743517)
chr8 (526-611)||(27988603-27988687)
chr8 (526-611)||(28045905-28045989)
chr8 (526-611)||(33357233-33357317)
chr8 (526-610)||(12203854-12203936)
chr8 (526-610)||(12448282-12448364)
chr8 (524-607)||(20831655-20831737)
chr8 (526-609)||(34228682-34228764)
chr8 (526-608)||(21595848-21595928)
chr8 (528-611)||(4537850-4537932)
chr8 (531-609)||(12652630-12652707)
chr8 (526-608)||(16888648-16888728)
chr8 (524-610)||(43119216-43119301)
chr8 (526-610)||(11112638-11112721)
chr8 (529-609)||(16394168-16394247)
chr8 (526-609)||(2805364-2805446)
chr8 (526-609)||(37373206-37373287)
chr8 (529-611)||(9063159-9063239)
chr8 (526-612)||(29444244-29444329)
chr8 (526-611)||(4648193-4648276)
chr8 (526-611)||(16785085-16785168)
chr8 (526-596)||(42035085-42035154)
chr8 (526-590)||(9254005-9254068)
chr8 (526-609)||(32113908-32113990)
chr8 (524-611)||(40831279-40831361)
chr8 (526-611)||(9278210-9278294)
chr8 (526-575)||(16890584-16890633)
chr8 (526-575)||(36730477-36730526)
chr8 (534-609)||(29235235-29235309)
chr8 (526-575)||(7304622-7304671)
chr8 (526-575)||(9537928-9537977)
chr8 (526-611)||(10618016-10618100)
chr8 (526-610)||(3930337-3930419)
chr8 (484-527)||(27988498-27988541)
chr8 (484-527)||(28045800-28045843)
chr8 (526-568)||(34192815-34192857)
chr8 (575-609)||(39751624-39751658)
chr8 (526-575)||(28626801-28626850)
chr8 (575-607)||(9254069-9254101)
chr8 (485-529)||(42655276-42655320)
chr8 (486-527)||(7304518-7304560)
chr8 (610-656)||(23124864-23124909)
chr8 (575-609)||(23722248-23722282)
chr8 (575-609)||(29566700-29566734)
chr8 (526-564)||(42433647-42433685)
chr8 (526-611)||(17467601-17467685)
chr8 (575-608)||(43714340-43714373)
[»] chr4 (46 HSPs)
chr4 (526-612)||(789634-789719)
chr4 (526-612)||(15186240-15186325)
chr4 (526-611)||(16536046-16536130)
chr4 (614-734)||(35579377-35579496)
chr4 (526-611)||(43944505-43944589)
chr4 (526-610)||(18067983-18068066)
chr4 (528-610)||(4268928-4269009)
chr4 (524-609)||(54897308-54897392)
chr4 (526-612)||(7768935-7769020)
chr4 (526-611)||(43202487-43202571)
chr4 (526-610)||(4089141-4089224)
chr4 (526-609)||(32217045-32217127)
chr4 (526-612)||(29591186-29591271)
chr4 (529-609)||(54054548-54054627)
chr4 (529-612)||(47231979-47232061)
chr4 (526-609)||(24679746-24679827)
chr4 (526-609)||(28755621-28755702)
chr4 (526-609)||(32202584-32202666)
chr4 (527-620)||(52533890-52533982)
chr4 (524-611)||(33108775-33108860)
chr4 (526-610)||(55882683-55882765)
chr4 (526-609)||(3783605-3783687)
chr4 (528-611)||(12356242-12356324)
chr4 (526-610)||(42898850-42898933)
chr4 (526-606)||(50619089-50619168)
chr4 (526-612)||(6164091-6164175)
chr4 (526-608)||(19503209-19503289)
chr4 (526-575)||(37987968-37988017)
chr4 (526-611)||(46688309-46688398)
chr4 (526-609)||(4220195-4220277)
chr4 (528-575)||(39843940-39843987)
chr4 (526-609)||(54655980-54656062)
chr4 (526-568)||(36395139-36395181)
chr4 (526-610)||(50167590-50167671)
chr4 (526-575)||(53655982-53656031)
chr4 (526-586)||(54945882-54945941)
chr4 (526-559)||(30387238-30387271)
chr4 (528-568)||(30154269-30154309)
chr4 (526-610)||(49915158-49915241)
chr4 (477-527)||(16820996-16821047)
chr4 (524-575)||(31680565-31680616)
chr4 (485-523)||(43202383-43202421)
chr4 (526-564)||(53268764-53268802)
chr4 (526-611)||(5091714-5091798)
chr4 (575-612)||(12701922-12701959)
chr4 (575-612)||(22225898-22225935)
[»] chr2 (45 HSPs)
chr2 (526-612)||(561622-561707)
chr2 (526-606)||(4381798-4381877)
chr2 (613-734)||(44923804-44923925)
chr2 (526-611)||(27856500-27856584)
chr2 (526-611)||(30486208-30486292)
chr2 (526-609)||(20552931-20553013)
chr2 (526-609)||(31438646-31438728)
chr2 (528-610)||(6580188-6580269)
chr2 (528-610)||(22887749-22887830)
chr2 (526-609)||(44587902-44587984)
chr2 (529-610)||(32360976-32361056)
chr2 (526-606)||(3668217-3668295)
chr2 (526-610)||(26891767-26891850)
chr2 (524-611)||(22068422-22068507)
chr2 (528-611)||(31390010-31390092)
chr2 (528-610)||(1859161-1859242)
chr2 (526-611)||(32860100-32860184)
chr2 (526-609)||(43637165-43637246)
chr2 (526-612)||(22567599-22567684)
chr2 (526-615)||(2898066-2898153)
chr2 (526-611)||(26387168-26387252)
chr2 (526-611)||(34442636-34442719)
chr2 (526-611)||(38590978-38591062)
chr2 (529-609)||(8969514-8969591)
chr2 (526-613)||(11021326-11021411)
chr2 (575-611)||(35851921-35851957)
chr2 (528-611)||(4022585-4022666)
chr2 (535-606)||(5881221-5881290)
chr2 (524-606)||(28600971-28601050)
chr2 (526-564)||(39531868-39531906)
chr2 (526-575)||(5093643-5093692)
chr2 (526-575)||(27584771-27584820)
chr2 (530-611)||(44854448-44854528)
chr2 (526-609)||(38296178-38296259)
chr2 (530-609)||(44854310-44854387)
chr2 (526-564)||(15079062-15079100)
chr2 (530-607)||(16807332-16807409)
chr2 (530-607)||(16846613-16846690)
chr2 (485-527)||(34442532-34442574)
chr2 (530-564)||(35506740-35506774)
chr2 (529-575)||(35851858-35851904)
chr2 (530-607)||(44331741-44331818)
chr2 (578-611)||(5431633-5431666)
chr2 (575-608)||(29771417-29771450)
chr2 (530-606)||(31782673-31782749)
[»] chr1 (51 HSPs)
chr1 (526-611)||(42770094-42770178)
chr1 (526-610)||(29210412-29210495)
chr1 (526-612)||(18043159-18043244)
chr1 (524-610)||(29657770-29657855)
chr1 (526-614)||(12072166-12072253)
chr1 (528-612)||(30657605-30657688)
chr1 (526-609)||(17333386-17333467)
chr1 (526-609)||(24178567-24178649)
chr1 (526-609)||(38162850-38162932)
chr1 (528-607)||(38702039-38702117)
chr1 (526-613)||(51368889-51368975)
chr1 (526-611)||(14350381-14350465)
chr1 (526-611)||(15227737-15227821)
chr1 (526-610)||(13961211-13961293)
chr1 (524-611)||(29683193-29683280)
chr1 (526-609)||(5694321-5694403)
chr1 (612-716)||(46119661-46119765)
chr1 (526-612)||(51065852-51065937)
chr1 (526-611)||(9266832-9266916)
chr1 (526-609)||(3784817-3784899)
chr1 (526-609)||(30294485-30294567)
chr1 (526-612)||(47009990-47010075)
chr1 (526-614)||(6770332-6770419)
chr1 (526-610)||(45431278-45431360)
chr1 (526-611)||(47532774-47532857)
chr1 (528-609)||(3097659-3097739)
chr1 (526-611)||(35985725-35985808)
chr1 (526-610)||(19031919-19032002)
chr1 (534-608)||(19011108-19011180)
chr1 (526-611)||(41730303-41730390)
chr1 (526-607)||(36446429-36446508)
chr1 (526-610)||(48071482-48071564)
chr1 (524-607)||(23473566-23473648)
chr1 (524-611)||(52749600-52749686)
chr1 (530-611)||(28726013-28726094)
chr1 (526-612)||(39912383-39912468)
chr1 (528-611)||(26228193-26228273)
chr1 (528-611)||(43286720-43286802)
chr1 (575-609)||(38595905-38595939)
chr1 (526-576)||(50128276-50128326)
chr1 (526-564)||(52431625-52431663)
chr1 (529-606)||(48383218-48383294)
chr1 (528-608)||(10976008-10976087)
chr1 (528-564)||(37315373-37315409)
chr1 (526-613)||(12306914-12306999)
chr1 (526-609)||(38335170-38335251)
chr1 (528-575)||(39497340-39497387)
chr1 (485-527)||(14350278-14350320)
chr1 (575-609)||(52702298-52702332)
chr1 (526-575)||(8473018-8473067)
chr1 (526-575)||(15282618-15282667)
[»] scaffold0003 (1 HSPs)
scaffold0003 (526-610)||(53789-53872)
[»] chr5 (26 HSPs)
chr5 (526-614)||(13661803-13661890)
chr5 (526-609)||(10069969-10070051)
chr5 (526-609)||(35504344-35504426)
chr5 (526-611)||(8787337-8787421)
chr5 (526-611)||(10054456-10054540)
chr5 (526-609)||(34650937-34651018)
chr5 (526-613)||(35132518-35132604)
chr5 (524-611)||(19647760-19647846)
chr5 (524-612)||(13470148-13470235)
chr5 (526-609)||(11958071-11958153)
chr5 (526-609)||(12506296-12506378)
chr5 (526-611)||(39069379-39069462)
chr5 (526-611)||(4837256-4837339)
chr5 (526-609)||(6283562-6283644)
chr5 (526-609)||(21547498-21547579)
chr5 (526-608)||(20175228-20175309)
chr5 (526-609)||(9721711-9721793)
chr5 (526-613)||(31909628-31909713)
chr5 (526-575)||(40564508-40564557)
chr5 (526-606)||(11846075-11846154)
chr5 (524-575)||(19436938-19436989)
chr5 (524-575)||(40057340-40057391)
chr5 (526-608)||(2619661-2619742)
chr5 (575-612)||(21945013-21945050)
chr5 (485-527)||(35504240-35504282)
chr5 (577-610)||(20983519-20983552)
[»] scaffold0014 (1 HSPs)
scaffold0014 (526-611)||(68394-68478)
[»] scaffold0264 (1 HSPs)
scaffold0264 (526-611)||(22959-23043)
[»] scaffold0021 (1 HSPs)
scaffold0021 (526-611)||(116202-116286)
[»] scaffold0190 (1 HSPs)
scaffold0190 (526-609)||(14896-14978)
[»] scaffold0188 (1 HSPs)
scaffold0188 (526-608)||(6214-6295)
[»] scaffold0045 (2 HSPs)
scaffold0045 (524-609)||(50548-50632)
scaffold0045 (524-575)||(53448-53499)
[»] scaffold0206 (2 HSPs)
scaffold0206 (526-610)||(11074-11155)
scaffold0206 (486-527)||(10990-11031)
[»] scaffold0002 (1 HSPs)
scaffold0002 (526-611)||(147009-147093)
[»] scaffold1152 (1 HSPs)
scaffold1152 (526-610)||(677-760)
[»] scaffold0674 (1 HSPs)
scaffold0674 (526-590)||(8001-8064)
[»] scaffold0549 (1 HSPs)
scaffold0549 (526-590)||(7307-7370)
[»] scaffold0524 (1 HSPs)
scaffold0524 (526-609)||(825-907)
[»] scaffold1266 (1 HSPs)
scaffold1266 (526-610)||(292-374)
[»] scaffold0034 (1 HSPs)
scaffold0034 (528-611)||(95690-95772)
[»] scaffold0263 (1 HSPs)
scaffold0263 (526-610)||(19689-19771)
[»] scaffold0325 (1 HSPs)
scaffold0325 (526-612)||(17574-17657)
[»] scaffold0113 (1 HSPs)
scaffold0113 (528-568)||(40959-40999)
[»] scaffold1128 (1 HSPs)
scaffold1128 (526-564)||(1415-1453)


Alignment Details
Target: chr7 (Bit Score: 97; Significance: 3e-47; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 10210155 - 10210039
Alignment:
Q  16 ggacgtgtgggcgctcctagtaagcatagagtaaagcacgaacaaggaacatataaagatataacaataccattttatttctctgtaatcgagcatcacg 115  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  10210155 ggacgtgtgggcgctcctagcaagcatagagtaaagcacaaacaaggaacatataaagatataacagtaccattttatttctctgtaatcgagcagcacg 10210056  T
Q  116 tgctcctttaccaacat 132  Q
    ||| |||||||||||||    
T  10210055 tgcacctttaccaacat 10210039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 34333366 - 34333282
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  34333366 acaatttcaatgcattaattactatataatttcctttttcataccctt-aaccagtgccccgggggcaccggttagcatttccctt 34333282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 526 - 612
Target Start/End: Original strand, 29993591 - 29993676
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| |||| |||||||||||||||| ||||||||||||||||    
T  29993591 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccggtgccccgggggcacccgttagcatttcccttt 29993676  T

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Target: chr7; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 12218540 - 12218624
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||||||||||||| |||||||||  ||| | |||||||||||||||||||||||||||||||||||    
T  12218540 acaatttcaatgcattaactactatataatttcctttttcatatactt-atccagtgccccgggggcaccggttagcatttccctt 12218624  T

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Target: chr7; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 528 - 609
Target Start/End: Complemental strand, 24438557 - 24438477
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  24438557 aatttcaatgcattaactactatatagtttcctttttcataccctt-aactagtgccccgggggcaccggttagcatttccc 24438477  T

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Target: chr7; HSP #6
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 5239367 - 5239284
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||| |||| |||||||||||||||||||||    
T  5239367 acaatttcaatgcattaactactatataatttcctttttcataccatt-aaccagtgctccggaggcaccggttagcatttccct 5239284  T

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Target: chr7; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 526 - 610
Target Start/End: Original strand, 27456217 - 27456299
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||| |||||||| |||||||||||| ||||||||||||||    
T  27456217 acaatttcaatgcattaactactatataatttctttttccatatcctt-aaccagtg-cccgggggcaccagttagcatttccct 27456299  T

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Target: chr7; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 8754689 - 8754771
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||| ||  |||||||||||||||||||||    
T  8754689 acaatttcaatgcattaactactatataatttcatttttcatatcctt-aaccagtgctcccagggcaccggttagcatttccc 8754771  T

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Target: chr7; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 34606343 - 34606261
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||||||||| |||||||||||||| ||||||||| |||| |||||||||||||| |||||| |||||||||||||    
T  34606343 acaatttcaatgcattaattactatataatttcctttttcatatcctt-aaccagtgccccggaggcaccagttagcatttccc 34606261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 526 - 612
Target Start/End: Complemental strand, 4628648 - 4628563
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    |||||||||||| |||||||||||||||||||| ||||||||| |||| |||| ||||||| |||||| ||||||||||||||||||    
T  4628648 acaatttcaatgtattaactactatataatttcctttttcatatcctt-aaccggtgccccaggggcatcggttagcatttcccttt 4628563  T

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Target: chr7; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 526 - 612
Target Start/End: Original strand, 34546418 - 34546503
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| |||| || || |||||||| ||||||||||||||||||    
T  34546418 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccggtacctcgggggcatcggttagcatttcccttt 34546503  T

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Target: chr7; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 18486043 - 18485959
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||| |||||| |||||||||||||| ||||  ||| |||||| |||||||||||||||||||||||||||||||||||    
T  18486043 acaatttcaatacattaattactatataatttccttttcaatatccttaa-ccagtgccccgggggcaccggttagcatttccctt 18485959  T

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Target: chr7; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 24798507 - 24798590
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||||||||||||| ||||||||| || | ||| |||| ||||||||||||||||||||||||||||    
T  24798507 acaatttcaatgcattaactactatataatttcctttttcatatcc-tcaacaagtg-cccgggggcaccggttagcatttccctt 24798590  T

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Target: chr7; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 609
Target Start/End: Original strand, 43594138 - 43594222
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||| |||| ||||||||  |||||| ||||||||||||||||||    
T  43594138 atacaatttcaatgcattaactattatataatttccttttttatatcctt-aaccagtgttccggggacaccggttagcatttccc 43594222  T

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Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 1737059 - 1736980
Alignment:
Q  529 atttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||| |  |||||||||||||||||||    
T  1737059 atttcaatgcattaactattatataatttcatttttcatatcctt-aaccagtgccccagaagcaccggttagcatttccc 1736980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 526 - 589
Target Start/End: Complemental strand, 30810737 - 30810675
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccggg 589  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||    
T  30810737 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccagtgccccggg 30810675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 526 - 608
Target Start/End: Complemental strand, 28587991 - 28587911
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcc 608  Q
    ||||||||||| |||| |||||||||||||||| ||||||||| |||| ||||||||  ||||||||||||||||||||||||    
T  28587991 acaatttcaatacattgactactatataatttcctttttcatatcctt-aaccagtg-tccgggggcaccggttagcatttcc 28587911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 526 - 608
Target Start/End: Complemental strand, 47657062 - 47656981
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcc 608  Q
    |||||||||||||||||| |||||||||||||  ||||||||| |||| |||||||||||| |  ||||||||||||||||||    
T  47657062 acaatttcaatgcattaattactatataattttctttttcatatcctt-aaccagtgcccccgaagcaccggttagcatttcc 47656981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 529 - 611
Target Start/End: Complemental strand, 5729425 - 5729344
Alignment:
Q  529 atttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||| ||||||||| ||||||||||| ||||||||| |||| ||||||||| |||||  ||||||||| ||||||||||    
T  5729425 atttcaatacattaactattatataatttcctttttcatatcctt-aaccagtgctccgggaacaccggttaacatttccctt 5729344  T

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Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 539 - 616
Target Start/End: Complemental strand, 22973667 - 22973591
Alignment:
Q  539 attaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctttaatc 616  Q
    |||||||||||||||||||||||||| ||| | |||| |||||||||||| |||||  ||||||||||| ||||||||    
T  22973667 attaactactatataatttctttttttatatcattaa-ccagtgccccggaggcactagttagcatttctctttaatc 22973591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 45045852 - 45045803
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  45045852 acaatttcaatgcattaattactatataatttcatttttcatacccttaa 45045803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 47083137 - 47083088
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  47083137 acaatttcaatacattaactactatataatttcttttttcatatccttaa 47083088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 526 - 606
Target Start/End: Original strand, 11686428 - 11686507
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcattt 606  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| |||| |||||||  |||||  ||||| ||||||||||    
T  11686428 acaatttcaatgcattaactactatataatttccttttttatatcctt-aaccagtatcccggaagcaccagttagcattt 11686507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 47839574 - 47839492
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    |||||||||||| |||||||| ||||||| ||| ||||||||| |||| ||||||| |||| ||| |||||||||||||||||||    
T  47839574 acaatttcaatgtattaactattatataaattcctttttcatatcctt-aaccagtacccc-gggacaccggttagcatttccct 47839492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 28262098 - 28262034
Alignment:
Q  541 taactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcattt 606  Q
    |||||||||||||||||| ||||||||| |||| |||| ||| ||||| |||||||||||||||||    
T  28262098 taactactatataatttcctttttcatatcctt-aaccggtgacccggaggcaccggttagcattt 28262034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 42044397 - 42044446
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    |||||||||||  |||||||||||||||||||||||||||||||| ||||    
T  42044397 acaatttcaatctattaactactatataatttcttttttcatacctttaa 42044446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 18470043 - 18470126
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtg-ccccgggggcaccggttagcatttccc 609  Q
    |||||||||||| ||||||| |||||||||||| |||||  ||  ||| |||| ||| |||||||||||||||||||||||||||    
T  18470043 acaatttcaatgtattaactgctatataatttcctttttagtatgctt-aaccggtgcccccgggggcaccggttagcatttccc 18470126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 528 - 615
Target Start/End: Original strand, 37631648 - 37631734
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctttaat 615  Q
    ||||| |||||||||| || ||||||||||| ||||| ||| |||| |||| |||||||||  |||||||||| ||||||||| ||||    
T  37631648 aattttaatgcattaattattatataatttccttttttatatcctt-aacccgtgccccggaagcaccggttaacatttccctataat 37631734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 23363271 - 23363320
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    |||||||||||||||||||||||||| |||||| |||||| || ||||||    
T  23363271 acaatttcaatgcattaactactatacaatttcctttttcttatccttaa 23363320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 575 - 611
Target Start/End: Complemental strand, 6097370 - 6097334
Alignment:
Q  575 aaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||| |||||||||||||||||    
T  6097370 aaccagtgccccgggggcatcggttagcatttccctt 6097334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 526 - 614
Target Start/End: Original strand, 7689304 - 7689391
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctttaa 614  Q
    |||||||||||||||||| |||| || |||||| ||||| ||| |||| || ||||| ||| | | ||||||||| |||||||||||||    
T  7689304 acaatttcaatgcattaattactgtaaaatttccttttttatatcctt-aatcagtgtcccagagacaccggttaacatttccctttaa 7689391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 526 - 558
Target Start/End: Original strand, 37674208 - 37674240
Alignment:
Q  526 acaatttcaatgcattaactactatataatttc 558  Q
    |||||||||||||||||||||||||||||||||    
T  37674208 acaatttcaatgcattaactactatataatttc 37674240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 564
Target Start/End: Complemental strand, 4087702 - 4087667
Alignment:
Q  529 atttcaatgcattaactactatataatttctttttt 564  Q
    |||||||||||||||||||||||||||||| |||||    
T  4087702 atttcaatgcattaactactatataatttccttttt 4087667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 18117225 - 18117183
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcata 568  Q
    ||||||||||| ||||||||||||||||||||| | |||||||    
T  18117225 acaatttcaatacattaactactatataatttcctctttcata 18117183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 575 - 609
Target Start/End: Complemental strand, 30703723 - 30703689
Alignment:
Q  575 aaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||||||||||||||||| ||||||||    
T  30703723 aaccagtgccccgggggcaccggttaacatttccc 30703689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 526 - 563
Target Start/End: Complemental strand, 22739905 - 22739868
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttt 563  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  22739905 acaatttcaatgcattaactactatatactttcctttt 22739868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 1e-34; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 526 - 613
Target Start/End: Complemental strand, 52520763 - 52520677
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttta 613  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  52520763 acaatttcaatgcattaactactatataatttcctttttcataccctt-aaccagtgccccgggggcaccggttagcatttcccttta 52520677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 39074501 - 39074419
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39074501 acaatttcaatgcattaactactatataatttcctttttcataccctt-aaccagtgccccgggggcaccggttagcatttccc 39074419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 272302 - 272219
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  272302 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccagtgccccgggggcaccggttagcatttccct 272219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 526 - 612
Target Start/End: Complemental strand, 46352716 - 46352631
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    ||||||||||||||||||||||| ||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  46352716 acaatttcaatgcattaactactgtataatttcctttttcatatccttaa-ccagtgccccgggggcaccggttagcatttcccttt 46352631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 49893413 - 49893330
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  49893413 acaatttcaatgcattaactattatataatttcctttttcatatcctt-aaccagtgccccgggggcaccggttagcatttccct 49893330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 43786953 - 43786871
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| ||||||||||||||||||||    
T  43786953 acaatttcaatgcattaactactatataatttcctttttcataccatt-aaccagtgccccggaggcaccggttagcatttccc 43786871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 667 - 734
Target Start/End: Original strand, 8195409 - 8195476
Alignment:
Q  667 aaatcccaaaatgcccttacttgatgttagttagcagttttatcaaaaactaaaatataactccttgg 734  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  8195409 aaatcccaaaatgcccttacttgatgttagtttgcagttttatcaaaaacaaaaatataactccttgg 8195476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 20924074 - 20923992
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||||||||    
T  20924074 acaatttcaatgaattaactactatataatttcctttttcataccctt-aaccagtgccccggaagcaccggttagcatttccc 20923992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 48725353 - 48725271
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||||||||| |||||||||||||| ||||||||| |||| |||||||||||| ||||||||||||||||||||||    
T  48725353 acaatttcaatgcattaattactatataatttcctttttcatatcctt-aaccagtgcccccggggcaccggttagcatttccc 48725271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 526 - 612
Target Start/End: Complemental strand, 18014754 - 18014669
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    ||||||||||||||||||||||||||||||||  ||||||||| |||| || |||||||||||||||||| ||||||||||||||||    
T  18014754 acaatttcaatgcattaactactatataatttactttttcatatcctt-aatcagtgccccgggggcaccagttagcatttcccttt 18014669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 40362684 - 40362768
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||| || ||||||||||| ||||| ||||||||||||||||    
T  40362684 acaattttaatgcattaactactatataatttcttttttcatatcctt-aatcagtgccccggaggcacgggttagcatttccctt 40362768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 525 - 610
Target Start/End: Complemental strand, 41304088 - 41304004
Alignment:
Q  525 tacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| |||| ||||| |||||||| |||||||||||||||||||||    
T  41304088 tacaatttcaatgcattaattactatataatttcctttttcatatcctt-aaccactgccccggaggcaccggttagcatttccct 41304004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 524 - 609
Target Start/End: Complemental strand, 52246666 - 52246582
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||| |||| |||||||||||||| |||||| |||||||||||||    
T  52246666 atacaatttcaatgcattaacaactatataatttcatttttcatatcctt-aaccagtgccccggaggcaccagttagcatttccc 52246582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 526 - 614
Target Start/End: Original strand, 53489928 - 53490017
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgcccc--gggggcaccggttagcatttccctttaa 614  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||||| |||||||||||| ||||    
T  53489928 acaattttaatgcattaactactatataatttcctttttcataccctt-aaccagtgccccgggggggcaccgattagcatttcccattaa 53490017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 858671 - 858587
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| ||| ||||| | ||||||||||||| |||||||||||    
T  858671 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aactagtgcactgggggcaccggtttgcatttccctt 858587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 524 - 609
Target Start/End: Complemental strand, 28139393 - 28139309
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||| |  ||||||||| |||||||||||||    
T  28139393 atacaatttcaatgcattaactactatttaatttcttttttcatatcctt-aaccagtgtcttgggggcaccagttagcatttccc 28139309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 667 - 739
Target Start/End: Original strand, 1412174 - 1412246
Alignment:
Q  667 aaatcccaaaatgcccttacttgatgttagttagcagttttatcaaaaactaaaatataactccttggtagca 739  Q
    ||||||||||||||| |||||||||  ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  1412174 aaatcccaaaatgcctttacttgataatagttagcagttttatcaaaaacaaaaatataactccttggcagca 1412246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 4168265 - 4168183
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||| |||| ||||||| |||||| ||||||||||||||||||||    
T  4168265 acaatttcaatacattaactactatataatttccttttttatatcctt-aaccagttccccggaggcaccggttagcatttccc 4168183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 526 - 606
Target Start/End: Original strand, 41554044 - 41554122
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcattt 606  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||| || |||||||| ||||||||||    
T  41554044 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccagtgcacc-ggggcaccagttagcattt 41554122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 2119512 - 2119431
Alignment:
Q  527 caatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||| || || ||||||||| ||||||||    
T  2119512 caatttcaatgcattaactactatataatttcctttttcata-tctttaaccagtgcctcgaggacaccggttaacatttccc 2119431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 524 - 605
Target Start/End: Complemental strand, 7468495 - 7468417
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatt 605  Q
    ||||||||||||||||||||||||||||||||||| ||||||||  |||| |||||||| ||||||||  ||||||||||||    
T  7468495 atacaatttcaatgcattaactactatataatttcctttttcatttcctt-aaccagtgtcccggggg--ccggttagcatt 7468417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 526 - 608
Target Start/End: Original strand, 42964353 - 42964434
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcc 608  Q
    |||||||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||  ||||| |||| |||||||    
T  42964353 acaatttcaatgcattaactactataaaatttcatttttcatatcctt-aaccagtgccccggaagcaccagttaacatttcc 42964434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 13159979 - 13159895
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||||||| |||||||||||||||||||| ||||||||| |||| ||| ||  |||| || |||||||||||||||||||||    
T  13159979 acaatttcaatgtattaactactatataatttcctttttcatatcctt-aactagaaccccaggagcaccggttagcatttccctt 13159895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 606
Target Start/End: Original strand, 50359291 - 50359368
Alignment:
Q  527 caatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcattt 606  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||| |||||||||| | |||||||| ||||||||||    
T  50359291 caatttcaatgcattaactactatataattttttttttcttaacctt-aaccagtgccac-ggggcaccagttagcattt 50359368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 526 - 603
Target Start/End: Original strand, 50395666 - 50395742
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagca 603  Q
    |||||||| |||||||||||||| ||||||||  ||||||||| || | |||||||| ||||||||||||||||||||    
T  50395666 acaatttctatgcattaactactgtataattttctttttcatatccct-aaccagtgtcccgggggcaccggttagca 50395742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 509 - 611
Target Start/End: Complemental strand, 52718268 - 52718166
Alignment:
Q  509 gggcaccggttaagcataca--atttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcattt 606  Q
    |||||| |||||||||||||  |||| |||| |||||||||||||||||||| ||||||||| |||| ||||||||  ||||| |||||| |||| ||||    
T  52718268 gggcactggttaagcatacacaattttaatgtattaactactatataatttcctttttcatatcctt-aaccagtg-tccgggagcaccgattagtattt 52718171  T
Q  607 ccctt 611  Q
    |||||    
T  52718170 ccctt 52718166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 528 - 568
Target Start/End: Complemental strand, 42548175 - 42548135
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcata 568  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  42548175 aatttcaatgcattaactactatataatttcttttttcata 42548135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 527 - 586
Target Start/End: Complemental strand, 2391688 - 2391630
Alignment:
Q  527 caatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgcccc 586  Q
    |||||||||||||||||||||||||||||||| |||||| || |||| ||||||||||||    
T  2391688 caatttcaatgcattaactactatataatttcctttttcttatcctt-aaccagtgcccc 2391630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 527 - 586
Target Start/End: Complemental strand, 2393449 - 2393391
Alignment:
Q  527 caatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgcccc 586  Q
    |||||||||||||||||||||||||||||||| |||||| || |||| ||||||||||||    
T  2393449 caatttcaatgcattaactactatataatttcctttttcttatcctt-aaccagtgcccc 2393391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 10617388 - 10617469
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||| ||||||||||||||||||||||||| ||||| ||| |||| || |||||  |||||||||||||||| ||||||||    
T  10617388 acaattttaatgcattaactactatataatttccttttttatatcctt-aatcagtg-tccgggggcaccggttaacatttccc 10617469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 528 - 607
Target Start/End: Original strand, 43269845 - 43269923
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttc 607  Q
    ||||||||||||||||||||||| |||||||  |||||||| |||| ||||||||| |||  ||||||||||| ||||||    
T  43269845 aatttcaatgcattaactactatgtaatttcccttttcatatcctt-aaccagtgctccgaaggcaccggttaacatttc 43269923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 611
Target Start/End: Original strand, 11308317 - 11308398
Alignment:
Q  529 atttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||||||||||||| ||||||||||| ||||||| | |||| || ||||| |||||   ||||||||||||||||||||    
T  11308317 atttcaatgcattaactattatataatttcctttttcacatcctt-aatcagtgtcccggaaacaccggttagcatttccctt 11308398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 23925359 - 23925280
Alignment:
Q  529 atttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||| |||||||||| |||||||||||||| ||||| |||  ||| ||||||| ||||||||| ||| |||||||||||||    
T  23925359 attttaatgcattaattactatataatttccttttttatattctt-aaccagttccccgggggtaccagttagcatttccc 23925280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 538 - 609
Target Start/End: Original strand, 27994416 - 27994486
Alignment:
Q  538 cattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||| ||||||| ||||||||||||  || |||||| ||||||||||||||||| |||||| ||||||||    
T  27994416 cattaattactataaaatttcttttttagtatccttaa-ccagtgccccgggggcatcggttaacatttccc 27994486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 29241717 - 29241670
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    |||||||||||||||||||||||||||||||  |||||||| ||||||    
T  29241717 aatttcaatgcattaactactatataatttccattttcatatccttaa 29241670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 2505431 - 2505389
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcata 568  Q
    |||||||||||||| |||||||||||||||||| |||||||||    
T  2505431 acaatttcaatgcactaactactatataatttcctttttcata 2505389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 548 - 609
Target Start/End: Complemental strand, 2362861 - 2362801
Alignment:
Q  548 tatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||| ||||||||| |||||| ||| ||| ||||| |||||||||||||||||||    
T  2362861 tatataatttcctttttcatatccttaa-ccattgcaccgggagcaccggttagcatttccc 2362801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 22248968 - 22248919
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    ||||||||||| || |||||||||||||||||| ||||||||| ||||||    
T  22248968 acaatttcaatacaataactactatataatttcctttttcatatccttaa 22248919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 524 - 556
Target Start/End: Complemental strand, 33140969 - 33140937
Alignment:
Q  524 atacaatttcaatgcattaactactatataatt 556  Q
    |||||||||||||||||||||||||||||||||    
T  33140969 atacaatttcaatgcattaactactatataatt 33140937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 528 - 564
Target Start/End: Original strand, 41993725 - 41993761
Alignment:
Q  528 aatttcaatgcattaactactatataatttctttttt 564  Q
    ||||||||||||||||||||||||||||||| |||||    
T  41993725 aatttcaatgcattaactactatataatttcattttt 41993761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 530 - 564
Target Start/End: Complemental strand, 26966574 - 26966540
Alignment:
Q  530 tttcaatgcattaactactatataatttctttttt 564  Q
    |||||||||| ||||||||||||||||||||||||    
T  26966574 tttcaatgcaataactactatataatttctttttt 26966540  T

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Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 614 - 655
Target Start/End: Complemental strand, 15214940 - 15214900
Alignment:
Q  614 atctatacctattaataaaaggcaatacaattttttggtgta 655  Q
    |||| |||||||||||||| ||||||||||||||||||||||    
T  15214940 atctttacctattaataaa-ggcaatacaattttttggtgta 15214900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 614 - 655
Target Start/End: Complemental strand, 15254159 - 15254119
Alignment:
Q  614 atctatacctattaataaaaggcaatacaattttttggtgta 655  Q
    |||| |||||||||||||| ||||||||||||||||||||||    
T  15254159 atctttacctattaataaa-ggcaatacaattttttggtgta 15254119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 38852299 - 38852216
Alignment:
Q  526 acaatttcaatgcattaa---ctactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||   ||||||||||||||| ||||| ||| |||| ||| | || |||||||  |||||||||||||||||    
T  38852299 acaatttcaatgcattaattactactatataatttcattttttatatcctt-aacgaatgtcccgggg--accggttagcatttccc 38852216  T

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Target: chr6 (Bit Score: 73; Significance: 6e-33; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 526 - 614
Target Start/End: Complemental strand, 3515848 - 3515761
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctttaa 614  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  3515848 acaatttcaatgcattaactactatataatttcctttttcataccctt-aaccagtgccctgggggcaccggttagcatttccctttaa 3515761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 392178 - 392096
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  392178 acaatttcaatgcattaactactatataatttcctttttcataccctt-aaccagtgccccgggggcaccggttagcatttccc 392096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 27433574 - 27433491
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27433574 acaattttaatgcattaactactatataatttcctttttcataccctt-aaccagtgccccgggggcaccggttagcatttccct 27433491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 20898030 - 20897946
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||| |||||||||||||||||||||||||    
T  20898030 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccagtgccctgggggcaccggttagcatttccctt 20897946  T

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Target: chr6; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 526 - 614
Target Start/End: Original strand, 32929612 - 32929699
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctttaa 614  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  32929612 acaatttcaatgcattaattaatatataatttcctttttcataccctt-aaccattgccccgggggcaccggttagcatttccctttaa 32929699  T

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Target: chr6; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 4215777 - 4215693
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||||||||||| ||||||||||    
T  4215777 acaatttcaatgcattaactattatataatttcctttttcatactctt-aaccagtgccccgggggcaccggttaacatttccctt 4215693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 524 - 615
Target Start/End: Original strand, 3026111 - 3026199
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctttaat 615  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||  |||||||| |||||||||||||||||||    
T  3026111 atacaatttcaatgcattaactactgtataatttcatttttcataccctt-aaccagtgccc--ggggcaccagttagcatttccctttaat 3026199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 530 - 614
Target Start/End: Complemental strand, 12525797 - 12525714
Alignment:
Q  530 tttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctttaa 614  Q
    |||||||| |||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||||||||||||||||||||||    
T  12525797 tttcaatgtattaactactatataatttcctttttcataccctt-aaccagtaccccggaggcaccggttagcatttccctttaa 12525714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 526 - 607
Target Start/End: Complemental strand, 2350734 - 2350654
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttc 607  Q
    ||||||||||| ||||||||||||||||||||| ||||||||| |||| ||||||||||||||| |||||||||||||||||    
T  2350734 acaatttcaatacattaactactatataatttcctttttcatatcctt-aaccagtgccccgggagcaccggttagcatttc 2350654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 23402220 - 23402136
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||||||||||||| |||||||||||||| ||||||||| |||| |||||||||||||| |||||| |||||||||||||||    
T  23402220 acaatttcaatgcattaattactatataatttcctttttcatatcctt-aaccagtgccccggaggcaccagttagcatttccctt 23402136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 34396631 - 34396715
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| |||| ||| || |||||||||||||||||||||||||    
T  34396631 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aacctgtgtcctgggggcaccggttagcatttccctt 34396715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 12145221 - 12145303
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| ||| ||||| | |||||||||||||||||||||||    
T  12145221 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aacaagtgcactgggggcaccggttagcatttccc 12145303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 524 - 610
Target Start/End: Complemental strand, 31280405 - 31280320
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | ||| || ||||||| |||| ||||||||||||||||||||    
T  31280405 atacaatttcaatgcattaactactatataatttcctttttcattctctt-aatcagtgcctcgggagcaccggttagcatttccct 31280320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 7851263 - 7851347
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||| |||||||||| |||||||||||||  ||||||||| |||||| ||||||||| |||||||||||||||||||||||||    
T  7851263 acaattttaatgcattaattactatataattttctttttcatatccttaa-ccagtgccctgggggcaccggttagcatttccctt 7851347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 528 - 609
Target Start/End: Original strand, 21878453 - 21878533
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||| |||| |||||| || ||||||||||||||||||||    
T  21878453 aatttcaatgcattaactactatataatttcctttttcatatcctt-aacccgtgcccgggaggcaccggttagcatttccc 21878533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 524 - 611
Target Start/End: Original strand, 1391280 - 1391365
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||| || |||| |||| || |||||||||||||||||||||    
T  1391280 atacaatttcaatgcattaactactatataatttcctttttcatatcctt-aatcagtacccc-ggagcaccggttagcatttccctt 1391365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 35043972 - 35043890
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| |||||||| |||| || |||| |||||||||||||    
T  35043972 acaatttcaatgaattaactactatataatttcttttttcatatcctt-aaccagtgtcccgtggacaccagttagcatttccc 35043890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 13529537 - 13529454
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||||||||||||||||||||||| ||||||| | |||| |||||||||||||  |||||  ||||||||||||||    
T  13529537 acaatttcaatgcattaactactatataatttcctttttcacatcctt-aaccagtgccccgaaggcacaagttagcatttccct 13529454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 526 - 610
Target Start/End: Original strand, 29451219 - 29451301
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| |||| ||| ||||| |||||| ||||||||||||||    
T  29451219 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccggtg-cccggaggcaccagttagcatttccct 29451301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 524 - 607
Target Start/End: Complemental strand, 9661070 - 9660988
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttc 607  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| |||| |||  ||||| || |||||||||||||||||||    
T  9661070 atacaatttcaatgcattaactattatgtaatttcttttttcatatcctt-aactggtgccacgagggcaccggttagcatttc 9660988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 526 - 612
Target Start/End: Original strand, 18276719 - 18276803
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    |||| |||||||||||||||||||||||||||| ||||||||| |||| |||||||| ||| |||||||| |||| |||||||||||    
T  18276719 acaaattcaatgcattaactactatataatttcctttttcatatcctt-aaccagtg-cccaggggcaccagttaacatttcccttt 18276803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 526 - 606
Target Start/End: Original strand, 32985297 - 32985376
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcattt 606  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||| |||| ||||| ||||||| ||||||||||| ||||||    
T  32985297 acaatttcaatacattaactactatataatttccttttttatatcctt-aaccaatgccccgagggcaccggtttgcattt 32985376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 526 - 590
Target Start/End: Original strand, 34477654 - 34477717
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggg 590  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||    
T  34477654 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccagtgcccggggg 34477717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 526 - 605
Target Start/End: Original strand, 34851953 - 34852030
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatt 605  Q
    ||||||||||||||||||||||||||||||||| ||||||||| | ||||  ||||| ||| || |||||||||||||||    
T  34851953 acaatttcaatgcattaactactatataatttcctttttcatatctttaa--cagtgtcccaggagcaccggttagcatt 34852030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 528 - 609
Target Start/End: Complemental strand, 2581032 - 2580952
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||| ||||| ||| | || ||||||| || |  |||||||||||||||||||||    
T  2581032 aatttcaatgcattaactactatataatttccttttttatatcatt-aaccagtacctcaagggcaccggttagcatttccc 2580952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 26467228 - 26467277
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  26467228 acaatttcaatgcattaactactatataatttcctttttcatatccttaa 26467277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 23629680 - 23629761
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||| ||||||||||||||||||||  ||||||||| |||| || ||||||||| |||||| |||||| ||||||||    
T  23629680 acaatttcaatacattaactactatataattttctttttcatatcctt-aatcagtgcccc-ggggcatcggttaacatttccc 23629761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 25165517 - 25165566
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    |||||||||||  |||||||||||||||||||||||||||||| ||||||    
T  25165517 acaatttcaatatattaactactatataatttcttttttcatatccttaa 25165566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 528 - 609
Target Start/End: Complemental strand, 29978312 - 29978233
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||| |||||| |||||||||||||| ||||||||| |||| ||| ||||  |||| ||||||||||||||||||||    
T  29978312 aatttcaatacattaaatactatataatttcctttttcatatcctt-aactagtg-tccggaggcaccggttagcatttccc 29978233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 13417066 - 13417148
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||| |||| ||| ||||||| | ||| | |||||| ||||||||    
T  13417066 acaatttcaatacattaactaatatataatttcctttttcatatcctt-aactagtgccctgagggtatcggttaacatttccc 13417148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 537 - 611
Target Start/End: Complemental strand, 14559993 - 14559920
Alignment:
Q  537 gcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||||| |||||| ||||||||||||||  ||| || |||| |||||  ||||||||||||||||||||||    
T  14559993 gcattaactattatatattttcttttttcata-tctttaatcagttccccgaaggcaccggttagcatttccctt 14559920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 526 - 595
Target Start/End: Original strand, 11115199 - 11115267
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcacc 595  Q
    |||||||||||| |||||||| ||||||||||| ||||| ||| |||| |||||||||| ||||| ||||    
T  11115199 acaatttcaatgtattaactattatataatttccttttttatatcctt-aaccagtgcctcggggacacc 11115267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 526 - 566
Target Start/End: Complemental strand, 961091 - 961051
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttca 566  Q
    ||||||| ||||||||||||||||||||||||| |||||||    
T  961091 acaattttaatgcattaactactatataatttcctttttca 961051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 530 - 607
Target Start/End: Complemental strand, 22021710 - 22021633
Alignment:
Q  530 tttcaatgcattaactactatataatttcttttttca-tacccttaaaccagtgccccgggggcaccggttagcatttc 607  Q
    |||||||||| ||| |||||||||| ||||||||| | || |||||| | |||||||||||||||||| ||| ||||||    
T  22021710 tttcaatgcaataattactatataaattctttttttagtaaccttaa-ctagtgccccgggggcaccgattaacatttc 22021633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 575 - 613
Target Start/End: Complemental strand, 34706754 - 34706716
Alignment:
Q  575 aaccagtgccccgggggcaccggttagcatttcccttta 613  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  34706754 aaccggtgcccccggggcaccggttagcatttcccttta 34706716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 575 - 609
Target Start/End: Original strand, 34712278 - 34712312
Alignment:
Q  575 aaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||||| ||||||||||||||||||||    
T  34712278 aaccagtgccccggaggcaccggttagcatttccc 34712312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 612 - 657
Target Start/End: Complemental strand, 21686161 - 21686117
Alignment:
Q  612 taatctatacctattaataaaaggcaatacaattttttggtgtagc 657  Q
    |||||||||||||||||| |||||||||||  ||||||||||||||    
T  21686161 taatctatacctattaat-aaaggcaatacttttttttggtgtagc 21686117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 2e-32; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 30675676 - 30675758
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30675676 acaatttcaatgcattaactactatataatttcctttttcataccctt-aaccagtgccccgggggcaccggttagcatttccc 30675758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 526 - 612
Target Start/End: Complemental strand, 168548 - 168463
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  168548 acaatttcaatgcattaactactatataatttcctttttcataccctt-aaccagtgccccggaggcaccggttagcatttcccttt 168463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 611 - 739
Target Start/End: Original strand, 29781131 - 29781259
Alignment:
Q  611 ttaatctatacctattaataaaaggcaatacaattttttggtgtagcnnnnnnnnn-aaatcccaaaatgcccttacttgatgttagttagcagttttat 709  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||          |||||||||||||||||||||||||||||||||||| ||||||    
T  29781131 ttaatctatacctattaataaa-ggcaatactattttttggtgtagcctttttttgtaaatcccaaaatgcccttacttgatgttagttagcaattttat 29781229  T
Q  710 caaaaactaaaatataactccttggtagca 739  Q
    ||||||| ||||||||||||||||| ||||    
T  29781230 caaaaacaaaaatataactccttggcagca 29781259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 612 - 734
Target Start/End: Complemental strand, 510339 - 510217
Alignment:
Q  612 taatctatacctattaataaaaggcaatacaattttttggtgtagcnnnnnnnnn-aaatcccaaaatgcccttacttgatgttagttagcagttttatc 710  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||||    
T  510339 taatctatacctattaataaa-ggcaatactattttttggtgtagtttttttttgtaaatcccaaaatgcccttacttgatgttagttagcagttttatc 510241  T
Q  711 aaaaactaaaatataactccttgg 734  Q
    |||||| |||||||||||||||||    
T  510240 aaaaacaaaaatataactccttgg 510217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 528 - 614
Target Start/End: Complemental strand, 13643092 - 13643007
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctttaa 614  Q
    ||||||||||||||||||||||||||||||| |||||| || |||||| |||||||||||||||||||||||||||||| |||||||    
T  13643092 aatttcaatgcattaactactatataatttcctttttcgtatccttaa-ccagtgccccgggggcaccggttagcattttcctttaa 13643007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 528 - 614
Target Start/End: Complemental strand, 13743517 - 13743432
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctttaa 614  Q
    ||||||||||||||||||||||||||||||| |||||| || |||||| |||||||||||||||||||||||||||||| |||||||    
T  13743517 aatttcaatgcattaactactatataatttcctttttcgtatccttaa-ccagtgccccgggggcaccggttagcattttcctttaa 13743432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 27988603 - 27988687
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  27988603 acaatttcaatgcattaactattatataatttcctttttcatatcctt-aaccagtgccccggaggcaccggttagcatttccctt 27988687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 28045905 - 28045989
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  28045905 acaatttcaatgcattaactattatataatttcctttttcatatcctt-aaccagtgccccggaggcaccggttagcatttccctt 28045989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 33357233 - 33357317
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||| ||||||||||| |||||||||||||||    
T  33357233 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccagtgctccgggggcaccagttagcatttccctt 33357317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 12203936 - 12203854
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||||||||||    
T  12203936 acaatttcaatgcattaactactatataatttcttttttcataccctt-aaccggt-acccgggggcaccggttagcatttccct 12203854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 12448364 - 12448282
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||||||||||    
T  12448364 acaatttcaatgcattaactactatataatttcttttttcataccctt-aaccggt-acccgggggcaccggttagcatttccct 12448282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 524 - 607
Target Start/End: Original strand, 20831655 - 20831737
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttc 607  Q
    |||| |||||||||||||||||||||||||||||| ||||||||| |||| |||||||| ||||||||||||||||||||||||    
T  20831655 atactatttcaatgcattaactactatataatttcctttttcatatcctt-aaccagtgtcccgggggcaccggttagcatttc 20831737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 34228764 - 34228682
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||||||||| |||||||||||||| ||||||||| |||| |||||||||||| ||||||||||||||||||||||    
T  34228764 acaatttcaatgcattaattactatataatttcctttttcatatcctt-aaccagtgcccccggggcaccggttagcatttccc 34228682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 526 - 608
Target Start/End: Complemental strand, 21595928 - 21595848
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcc 608  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||    
T  21595928 acaatttcaatgcattaactcctatataatttcctttttcataccctt-aaccagtg-cccgggggcaccggttagcatttcc 21595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 528 - 611
Target Start/End: Original strand, 4537850 - 4537932
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||||||||||| | ||| ||| |||||| |||||||||||| ||||||||||||||||||||||    
T  4537850 aatttcaatgcattaactactatataatttcctattttatatccttaa-ccagtgccccggaggcaccggttagcatttccctt 4537932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 531 - 609
Target Start/End: Complemental strand, 12652707 - 12652630
Alignment:
Q  531 ttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||||||||||||||||||| ||||||||| |||| ||||||||| || ||||||||||||||||||||||    
T  12652707 ttcaatgcattaactactatataatttcctttttcatatcctt-aaccagtgctccaggggcaccggttagcatttccc 12652630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 526 - 608
Target Start/End: Original strand, 16888648 - 16888728
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcc 608  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| |||| ||| |||||||||||||||||||||||||    
T  16888648 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aacctgtg-cccgggggcaccggttagcatttcc 16888728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 524 - 610
Target Start/End: Complemental strand, 43119301 - 43119216
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||||||||||||||||||||||||  |||||||||  ||| || |||||||||| ||||||||||||||||||||||    
T  43119301 atacaatttcaatgcattaactactatataattttctttttcata-tctttaatcagtgccccgagggcaccggttagcatttccct 43119216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 11112721 - 11112638
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||| |||||  ||||| ||||||||||||||    
T  11112721 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccagtgtcccggatgcaccagttagcatttccct 11112638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 16394168 - 16394247
Alignment:
Q  529 atttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||||||||| ||||||||||  ||||||| | |||||| |||||||||||||||||||||||||||||||||    
T  16394168 atttcaatgcattaactattatataattttctttttcacatccttaa-ccagtgccccgggggcaccggttagcatttccc 16394247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 2805364 - 2805446
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||| ||||||||||| ||||| ||||||||    
T  2805364 acaatttcaatgcattaactattatataatttcctttttcatatcctt-aaccagtgtcccgggggcactggttaacatttccc 2805446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 37373287 - 37373206
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||| ||||||||  |||||||||||||||||||||||||    
T  37373287 acaatttcaatgcattaactattatataatttcctttttcatatcctt-aaccagtg-tccgggggcaccggttagcatttccc 37373206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 529 - 611
Target Start/End: Original strand, 9063159 - 9063239
Alignment:
Q  529 atttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| ||||||||| || ||| ||||||||||||||||||||    
T  9063159 atttcaatgcattaactactatataatttcctttttcatatcctt-aaccagtgctcc-gggacaccggttagcatttccctt 9063239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 526 - 612
Target Start/End: Original strand, 29444244 - 29444329
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    ||||||||||||| ||||||||||||||||||| ||||||||| |||| || |||||||||||| |||||||||| ||||| |||||    
T  29444244 acaatttcaatgcgttaactactatataatttcctttttcatatcctt-aatcagtgccccgggagcaccggttaacattttccttt 29444329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 4648276 - 4648193
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||||||| |||||||||||||||||||| ||||||||| |||| || ||||||||| ||| ||||||||||||||||||||    
T  4648276 acaatttcaatgtattaactactatataatttcctttttcatatcctt-aatcagtgcccc-gggacaccggttagcatttccctt 4648193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 16785168 - 16785085
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||| |||||||| ||| || |||||||||||||||||||||    
T  16785168 acaatttcaatacattaactgctatataatttcttttttcatatcctt-aaccagtg-ccctggagcaccggttagcatttccctt 16785085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 526 - 596
Target Start/End: Original strand, 42035085 - 42035154
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccg 596  Q
    ||||||||||| ||||||||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||    
T  42035085 acaatttcaatacattaactactatataatttcctttttcatatcctt-aaccagtgctccgggggcaccg 42035154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 526 - 590
Target Start/End: Original strand, 9254005 - 9254068
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggg 590  Q
    |||||||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||||    
T  9254005 acaatttcaatgcattaactactataaaatttcatttttcatatcctt-aaccagtgccccgggg 9254068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 32113990 - 32113908
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| ||||| | | |||| | ||||||||||||| ||||    
T  32113990 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccaatactccggagacaccggttagcatctccc 32113908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 524 - 611
Target Start/End: Complemental strand, 40831361 - 40831279
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||||||||||||||  |||||||||  ||| ||||||||||    |||||| ||||||||||||||||    
T  40831361 atacaatttcaatgcattaactactatataattttctttttcata-tctttaaccagtgcc----gggcactggttagcatttccctt 40831279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 9278294 - 9278210
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||| ||||||||||| |||||||||  ||| ||| |||| ||| | |||||| |||||||||||||||    
T  9278294 acaatttcaatgcattaactattatataatttcctttttcata-tctttaacgagtgtccctgaggcaccagttagcatttccctt 9278210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 16890584 - 16890633
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  16890584 acaatttcaatgcattaactactatataatttcctttttcatatccttaa 16890633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 36730526 - 36730477
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  36730526 acaatttcaatgcattaactactatataatttcctttttcatatccttaa 36730477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 534 - 609
Target Start/End: Complemental strand, 29235309 - 29235235
Alignment:
Q  534 aatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||| ||| |||| || || ||| |||||  ||||||||||||||||||    
T  29235309 aatgcattaactactatataatttctttttttatatcctt-aatcaatgctccgggaacaccggttagcatttccc 29235235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 7304622 - 7304671
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    ||||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  7304622 acaatttcaatgcattaactactatataattttctttttcatatccttaa 7304671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 9537928 - 9537977
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    ||||||| ||||||||||||||||||||||||| ||||||||| ||||||    
T  9537928 acaattttaatgcattaactactatataatttcctttttcatatccttaa 9537977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 10618100 - 10618016
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||| | ||||||||||||||||||||||  ||||||||| |||| |||| ||||||  | ||||||||||||||||| ||||    
T  10618100 acaatttaattgcattaactactatataattttctttttcatatcctt-aacctgtgccctagaggcaccggttagcattttcctt 10618016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 610
Target Start/End: Original strand, 3930337 - 3930419
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    |||| |||||||||||||||||||||||||||| | |||||||   || ||| |||| ||||||||||||| |||||||||||||    
T  3930337 acaacttcaatgcattaactactatataatttcctctttcatattatt-aactagtg-cccgggggcaccgattagcatttccct 3930419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 484 - 527
Target Start/End: Original strand, 27988498 - 27988541
Alignment:
Q  484 tagggtcctactaaccggtgcccccgggcaccggttaagcatac 527  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||    
T  27988498 tagggtcctgctaaccggtgcccccgggcactggttaagcatac 27988541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 484 - 527
Target Start/End: Original strand, 28045800 - 28045843
Alignment:
Q  484 tagggtcctactaaccggtgcccccgggcaccggttaagcatac 527  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||    
T  28045800 tagggtcctgctaaccggtgcccccgggcactggttaagcatac 28045843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 34192857 - 34192815
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcata 568  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  34192857 acaatttcaatgcattaactagtatataatttcctttttcata 34192815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 575 - 609
Target Start/End: Original strand, 39751624 - 39751658
Alignment:
Q  575 aaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||||||||||||||||||||||||||    
T  39751624 aaccagtgccccgggggcaccggttagcatttccc 39751658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 28626850 - 28626801
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    ||||||||||| ||||||||||||||||||||| ||||||| | ||||||    
T  28626850 acaatttcaatacattaactactatataatttcctttttcacatccttaa 28626801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 575 - 607
Target Start/End: Original strand, 9254069 - 9254101
Alignment:
Q  575 aaccagtgccccgggggcaccggttagcatttc 607  Q
    |||||||||||||||||||||||||||||||||    
T  9254069 aaccagtgccccgggggcaccggttagcatttc 9254101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 485 - 529
Target Start/End: Original strand, 42655276 - 42655320
Alignment:
Q  485 agggtcctactaaccggtgcccccgggcaccggttaagcatacaa 529  Q
    |||||| | |||||||||||||| |||||||||||||||||||||    
T  42655276 agggtcatgctaaccggtgccccagggcaccggttaagcatacaa 42655320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 486 - 527
Target Start/End: Original strand, 7304518 - 7304560
Alignment:
Q  486 gggtcctactaaccggtgcccccgg-gcaccggttaagcatac 527  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  7304518 gggtcctactaaccggtgcccccggagcactggttaagcatac 7304560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 610 - 656
Target Start/End: Complemental strand, 23124909 - 23124864
Alignment:
Q  610 tttaatctatacctattaataaaaggcaatacaattttttggtgtag 656  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||    
T  23124909 tttaatctatacctattaat-aaaggcaatattattttttggtgtag 23124864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 575 - 609
Target Start/End: Complemental strand, 23722282 - 23722248
Alignment:
Q  575 aaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||||||||||||||||| ||||||||    
T  23722282 aaccagtgccccgggggcaccggttaacatttccc 23722248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 575 - 609
Target Start/End: Complemental strand, 29566734 - 29566700
Alignment:
Q  575 aaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||| ||||||||||||||||||||||||||||||    
T  29566734 aacccgtgccccgggggcaccggttagcatttccc 29566700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 564
Target Start/End: Original strand, 42433647 - 42433685
Alignment:
Q  526 acaatttcaatgcattaactactatataatttctttttt 564  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  42433647 acaatttcaatgcattaactattatataatttccttttt 42433685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 17467685 - 17467601
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||||||||||||| ||||  |||||||| ||||||||| | || ||| ||||   |||||| |||||||||||||| ||||    
T  17467685 acaatttcaatgcattaattactgcataatttcctttttcatatcatt-aactagtgtttcgggggtaccggttagcattttcctt 17467601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 575 - 608
Target Start/End: Original strand, 43714340 - 43714373
Alignment:
Q  575 aaccagtgccccgggggcaccggttagcatttcc 608  Q
    |||||||||||||||||||||||||||| |||||    
T  43714340 aaccagtgccccgggggcaccggttagcgtttcc 43714373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 9e-32; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 526 - 612
Target Start/End: Original strand, 789634 - 789719
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  789634 acaatttcaatgcattaactactatataatttcctttttcataccctt-aacccgtgccccgggggcaccggttagcatttcccttt 789719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 526 - 612
Target Start/End: Complemental strand, 15186325 - 15186240
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15186325 acaatttcaatggattaactactatataatttcctttttcataccctt-aaccagtgccccgggggcaccggttagcatttcccttt 15186240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 16536130 - 16536046
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  16536130 acaatttcaatgcattaactactatataatttcctttttcatacccttaatcc-gtgccccgggggcaccggttagcatttccctt 16536046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 614 - 734
Target Start/End: Complemental strand, 35579496 - 35579377
Alignment:
Q  614 atctatacctattaataaaaggcaatacaattttttggtgtagcnnnnnnnnnaaatcccaaaatgcccttacttgatgttagttagcagttttatcaaa 713  Q
    ||||||||||||||||||| |||||||| |||||||||||||||         |||||||||||||| |||| |||||||||||||||||||||||||||    
T  35579496 atctatacctattaataaa-ggcaatactattttttggtgtagccttttttttaaatcccaaaatgctcttatttgatgttagttagcagttttatcaaa 35579398  T
Q  714 aactaaaatataactccttgg 734  Q
    ||| |||||||||||||||||    
T  35579397 aacaaaaatataactccttgg 35579377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 43944589 - 43944505
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  43944589 acaatttcaatgcattaactactatataatttcctttttcataccctt-aaccagtgccccggaggcaccggttagcatttccctt 43944505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 526 - 610
Target Start/End: Original strand, 18067983 - 18068066
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18067983 acaattttaatgcattaactactatataatttcctttttcataccctt-aaccagtgccccgggggcaccggttagcatttccct 18068066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 528 - 610
Target Start/End: Original strand, 4268928 - 4269009
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4268928 aatttcaatgcattaactactatatagtttcctttttcataccctt-aaccagtgccccgggggcaccggttagcatttccct 4269009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 524 - 609
Target Start/End: Complemental strand, 54897392 - 54897308
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||    
T  54897392 atacaatttcaatgcattaactactatataatttcctttctcatatcctt-aaccagtgccccgggggcaccggttagcatttccc 54897308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 526 - 612
Target Start/End: Complemental strand, 7769020 - 7768935
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||| |||||||||||||||    
T  7769020 acaatttcaatacattaactactatataatttcctttttcataccctt-aaccagtgccccgggggtaccgattagcatttcccttt 7768935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 43202487 - 43202571
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||| |||||||||| |||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  43202487 acaattttaatgcattaattactatataatttcctttttcataccctt-aactagtgccccgggggcaccggttagcatttccctt 43202571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 4089224 - 4089141
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||| || ||||||||| |||||||||||||||||||||||    
T  4089224 acaatttcaatgcattaactactatataattttctttttcataccctt-aatcagtgccccaggggcaccggttagcatttccct 4089141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 32217127 - 32217045
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| |||| ||||||||||||||||||||| |||||||||||||    
T  32217127 acaatttcaatgcattaactactatataatttccttttttatatcctt-aaccagtgccccgggggcaccagttagcatttccc 32217045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 526 - 612
Target Start/End: Complemental strand, 29591271 - 29591186
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    ||||||||||||||||||||||||||||||||| || ||||||  ||| ||||||||||||||||||||| ||||||||||||||||    
T  29591271 acaatttcaatgcattaactactatataatttccttattcatattctt-aaccagtgccccgggggcaccagttagcatttcccttt 29591186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 54054627 - 54054548
Alignment:
Q  529 atttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||||||||| ||||||||||||||||||||| |||| |||| ||||||| ||||||||||||||||||||||    
T  54054627 atttcaatgcattaactattatataatttcttttttcatatcctt-aaccggtgcccccggggcaccggttagcatttccc 54054548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 529 - 612
Target Start/End: Original strand, 47231979 - 47232061
Alignment:
Q  529 atttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    |||||||||||||||||| ||||||||||| ||||||| | |||||| ||||||| ||||||||||||||||||||||||||||    
T  47231979 atttcaatgcattaactattatataatttcctttttcacatccttaa-ccagtgctccgggggcaccggttagcatttcccttt 47232061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 24679746 - 24679827
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||| | | ||||||||||||||||||    
T  24679746 acaatttcaatacattaactactatataatttcttttttcatatcctt-aaccagtgcccc-gagacaccggttagcatttccc 24679827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 28755702 - 28755621
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||| ||| ||| ||||||||||||||||||    
T  28755702 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccagtg-ccctgggacaccggttagcatttccc 28755621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 32202584 - 32202666
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| |||| |||| ||||||||||| ||||||||| ||||||||    
T  32202584 acaatttcaatgcattaactactatataatttccttttttatatcctt-aacccgtgccccggggacaccggttaacatttccc 32202666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 527 - 620
Target Start/End: Original strand, 52533890 - 52533982
Alignment:
Q  527 caatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctttaatctata 620  Q
    |||||||| ||||||||||||||||||||||| |||||||||  ||| |||||||| || || ||||||||||| |||||||||||||| ||||    
T  52533890 caatttcagtgcattaactactatataatttcctttttcatattctt-aaccagtgtcctggaggcaccggttaacatttccctttaatttata 52533982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 524 - 611
Target Start/End: Original strand, 33108775 - 33108860
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||| |||||||||||||||||| ||||||||||| ||||||||| |  | |||||||||||||| ||||||||||| ||||||||||    
T  33108775 atactatttcaatgcattaactattatataatttcctttttcatatc--ttaaccagtgccccggaggcaccggttaacatttccctt 33108860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 55882765 - 55882683
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    |||||||||||||||||| ||||||||||||| |||||||||| |||| ||| |||||||||| | |||||||||||||||||||    
T  55882765 acaatttcaatgcattaattactatataattt-ttttttcatatcctt-aacgagtgccccggagacaccggttagcatttccct 55882683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 3783605 - 3783687
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||| ||||||||||||||||||||||||| |||||||||   || |||| ||||||||| ||||||||||||||||||||    
T  3783605 acaattttaatgcattaactactatataatttcatttttcata-tgtttaaccggtgccccggaggcaccggttagcatttccc 3783687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 528 - 611
Target Start/End: Complemental strand, 12356324 - 12356242
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||| |||||||  | | ||||||||||||||||||||||||    
T  12356324 aatttcaatgtattaactactatataatttcctttttcatatcctt-aaccagtatctcaggggcaccggttagcatttccctt 12356242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 526 - 610
Target Start/End: Original strand, 42898850 - 42898933
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| |||| ||||||||||| ||  |||||| ||| |||||||||    
T  42898850 acaatttcaatgcattaactactatataatttccttttttatatcctt-aaccagtgccctggaagcaccgattaacatttccct 42898933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 526 - 606
Target Start/End: Complemental strand, 50619168 - 50619089
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcattt 606  Q
    ||||||||||||||||||||||||||||||||  |||||||||  ||| || |||||||||||| ||||| ||||||||||    
T  50619168 acaatttcaatgcattaactactatataattttctttttcatattctt-aatcagtgccccgggagcaccagttagcattt 50619089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 526 - 612
Target Start/End: Complemental strand, 6164175 - 6164091
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    |||||||||||||||||||||||||||||||| | |||| ||| |||| ||||||||||||  | |||||||||| |||||||||||    
T  6164175 acaatttcaatgcattaactactatataattt-tcttttgatatcctt-aaccagtgccccaagagcaccggttatcatttcccttt 6164091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 526 - 608
Target Start/End: Original strand, 19503209 - 19503289
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcc 608  Q
    |||||||||||| |||||||| ||||||||||| ||||||||| |||| |||||||  |||||| ||||||||||||||||||    
T  19503209 acaatttcaatgtattaactagtatataatttcctttttcatatcctt-aaccagt-acccgggagcaccggttagcatttcc 19503289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 37988017 - 37987968
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  37988017 acaatttcaatacattaactactatataatttcctttttcatacccttaa 37987968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 46688309 - 46688398
Alignment:
Q  526 acaatttcaatgcattaactactatataattt-cttt----tttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||| |||||||| ||||    ||||||| |||||| |||||||| |||||||||| |||||||||||||||    
T  46688309 acaatttcaatgcattaactactgtataattttctttaatttttcatatccttaa-ccagtgcctcgggggcaccagttagcatttccctt 46688398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 4220277 - 4220195
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||| ||||||||||||||||||||| ||||||||| |||| |||| || |||||  |||| |||||| ||||||||    
T  4220277 acaatttcaatacattaactactatataatttcctttttcatatcctt-aacccgtaccccgaaggcatcggttatcatttccc 4220195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 39843987 - 39843940
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  39843987 aatttcaatgcattaactactatataatttcatttttcatatccttaa 39843940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 54655980 - 54656062
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||| |||| |||||||||||| ||  |||| |||| ||||||||    
T  54655980 acaatttcaatacattaactactatataatttccttttttatatcctt-aaccagtgcccccggaacaccagttaacatttccc 54656062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 36395181 - 36395139
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcata 568  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  36395181 acaatttcaatgcattaactactatataatttcctttttcata 36395139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 50167671 - 50167590
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||||||||||||  ||||||||  |||||||||  ||| ||||||||||||| |  |||||||||||||||||||    
T  50167671 acaatttcaatgcattaactac--tataattttctttttcata-tctttaaccagtgccccgagaacaccggttagcatttccct 50167590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 53655982 - 53656031
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  53655982 acaatttcaatacattaactattatataatttcttttttcatatccttaa 53656031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 586
Target Start/End: Original strand, 54945882 - 54945941
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgcccc 586  Q
    ||||||||||| |||||||| |||||||||||| ||||||||| |||| ||||||||||||    
T  54945882 acaatttcaatacattaactgctatataatttcctttttcatatcctt-aaccagtgcccc 54945941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 526 - 559
Target Start/End: Original strand, 30387238 - 30387271
Alignment:
Q  526 acaatttcaatgcattaactactatataatttct 559  Q
    ||||||||||||||||||||||||||||||||||    
T  30387238 acaatttcaatgcattaactactatataatttct 30387271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 528 - 568
Target Start/End: Original strand, 30154269 - 30154309
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcata 568  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  30154269 aatttcaatacattaactactatataatttcctttttcata 30154309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 49915241 - 49915158
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||| |||||| |||||||||| ||  ||||||||| |||| || |||||| || ||||| |||||| ||||||||||    
T  49915241 acaatttcaatacattaattactatataaatttctttttcatatcctt-aatcagtgcaccaggggcgccggtttgcatttccct 49915158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 477 - 527
Target Start/End: Complemental strand, 16821047 - 16820996
Alignment:
Q  477 tttaatctagggtcctactaaccggtgccccc-gggcaccggttaagcatac 527  Q
    |||||| ||||||||| ||||||||||||||| |||||| ||||||||||||    
T  16821047 tttaatgtagggtcctgctaaccggtgcccccggggcactggttaagcatac 16820996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 31680565 - 31680616
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    ||||||||||||||||||||||| ||| ||| ||  ||||||||||||||||    
T  31680565 atacaatttcaatgcattaactattatgtaactttctttttcatacccttaa 31680616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 485 - 523
Target Start/End: Original strand, 43202383 - 43202421
Alignment:
Q  485 agggtcctactaaccggtgcccccgggcaccggttaagc 523  Q
    |||||||| ||||||||||||||||||||| ||||||||    
T  43202383 agggtcctgctaaccggtgcccccgggcactggttaagc 43202421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 564
Target Start/End: Complemental strand, 53268802 - 53268764
Alignment:
Q  526 acaatttcaatgcattaactactatataatttctttttt 564  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  53268802 acaattttaatgcattaactaatatataatttctttttt 53268764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 5091714 - 5091798
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||| |||  ||||| || ||||||||||  |||||||||  ||||| ||||||||||||| | ||||||||| |||||||||    
T  5091714 acaattttaatatattaattattatataattttatttttcatattcttaa-ccagtgccccgggagtaccggttagtatttccctt 5091798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 575 - 612
Target Start/End: Original strand, 12701922 - 12701959
Alignment:
Q  575 aaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  12701922 aaccagtgccccgggggcaccagttaacatttcccttt 12701959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 575 - 612
Target Start/End: Original strand, 22225898 - 22225935
Alignment:
Q  575 aaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  22225898 aaccagtgtcccgggggcaccggttagcatttcgcttt 22225935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 9e-32; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 526 - 612
Target Start/End: Original strand, 561622 - 561707
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  561622 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccagtgccccgggggcaccggttagcatttcccttt 561707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 526 - 606
Target Start/End: Complemental strand, 4381877 - 4381798
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcattt 606  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||    
T  4381877 acaatttcaatgcattaactactatataatttcctttttcataccctt-aaccagtgcaccgggggcaccggttagcattt 4381798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 613 - 734
Target Start/End: Complemental strand, 44923925 - 44923804
Alignment:
Q  613 aatctatacctattaataaaaggcaatacaattttttggtgtagcnnnnnnnnn-aaatcccaaaatgcccttacttgatgttagttagcagttttatca 711  Q
    |||||||||||||||||||| |||||||| |||||||||||||||          ||||||||||||||||||| |||||||||||||||||||||||||    
T  44923925 aatctatacctattaataaa-ggcaatactattttttggtgtagcctttttttgtaaatcccaaaatgcccttatttgatgttagttagcagttttatca 44923827  T
Q  712 aaaactaaaatataactccttgg 734  Q
    ||||  |||||||||||||||||    
T  44923826 aaaataaaaatataactccttgg 44923804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 27856500 - 27856584
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||||||||||| ||||||||||    
T  27856500 acaatttcaatgcattaactattatataatttcctttttcatactctt-aaccagtgccccgggggcaccggttaacatttccctt 27856584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 30486292 - 30486208
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||| ||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||| |||||||||||||||    
T  30486292 acaatttcaatacattaactactatataatttcctttttcatatcctt-aaccagtgccccgggggcaccagttagcatttccctt 30486208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 20553013 - 20552931
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||||||||| |||||||||||||| ||||||||| |||| |||||||||||| ||||||||||||||||||||||    
T  20553013 acaatttcaatgcattaattactatataatttcctttttcatatcctt-aaccagtgcccccggggcaccggttagcatttccc 20552931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 31438728 - 31438646
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||| ||||||||| ||||||||| |||| ||||||||||||||| |||||||||||||||||||    
T  31438728 acaatttcaatgcattaactactgtataatttcctttttcatatcctt-aaccagtgccccgggagcaccggttagcatttccc 31438646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 528 - 610
Target Start/End: Complemental strand, 6580269 - 6580188
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||| ||||||| |||||||||||||||    
T  6580269 aatttcaatgcattaactactatatagtttcctttttcataccctt-aaccagtgcccccggggcactggttagcatttccct 6580188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 528 - 610
Target Start/End: Complemental strand, 22887830 - 22887749
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||| |||| ||||||||||||||||    
T  22887830 aatttcaatgcattaactactatataatttcttttttcatatcctt-aaccactgccccggaggcatcggttagcatttccct 22887749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 44587984 - 44587902
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||| |||||||||||||||||||| ||||| ||| |||| |||| ||||||||||||||||||||||||||||||    
T  44587984 acaatttcaatgtattaactactatataatttccttttttatatcctt-aaccggtgccccgggggcaccggttagcatttccc 44587902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 529 - 610
Target Start/End: Original strand, 32360976 - 32361056
Alignment:
Q  529 atttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    |||||||||||||||||| ||||||||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||||    
T  32360976 atttcaatgcattaactattatataattttctttttcacatccttaa-ccagtgccccgggggcaccggttagcatttccct 32361056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 526 - 606
Target Start/End: Original strand, 3668217 - 3668295
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcattt 606  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||  ||||||||||||||||||||||    
T  3668217 acaatttcaatgcattaactactatataatttccttttccataccctt-aaccagtg-tccgggggcaccggttagcattt 3668295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 526 - 610
Target Start/End: Original strand, 26891767 - 26891850
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||| |||| || ||||| |||||||||||||||||||||||||||    
T  26891767 acaatttcaatgcattaactaatatataatttccttttttatatcctt-aatcagtgtcccgggggcaccggttagcatttccct 26891850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 524 - 611
Target Start/End: Original strand, 22068422 - 22068507
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||| ||||||||||||||| | ||||||||| |||||| ||||||||||||||||||  |||||||||||||||    
T  22068422 atacaatttcaatgcat-aactactatataattccctttttcatatccttaa-ccagtgccccgggggcacttgttagcatttccctt 22068507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 528 - 611
Target Start/End: Complemental strand, 31390092 - 31390010
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||| ||||||||||||||||||||| ||||||||| |||| ||| |||||||||| |||||| |||||||||||||||    
T  31390092 aatttcaatacattaactactatataatttcctttttcatatcctt-aactagtgccccggaggcaccagttagcatttccctt 31390010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 528 - 610
Target Start/End: Complemental strand, 1859242 - 1859161
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    |||||||||||||||||||||||| |||||||||||| ||| |||| ||||| | ||||||||||||| ||||||||||||||    
T  1859242 aatttcaatgcattaactactatacaatttctttttttatatcctt-aaccattaccccgggggcaccagttagcatttccct 1859161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 32860184 - 32860100
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||||||||||||| |||||||||||||| ||||| ||| |||| |||| ||||||| ||||||||||||| ||||||||||    
T  32860184 acaatttcaatgcattaaatactatataatttccttttttatatcctt-aacccgtgcccccggggcaccggttaacatttccctt 32860100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 43637246 - 43637165
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||| |||||||| | | ||||||||||||||||||||||    
T  43637246 acaatttcaatgcattaactactatataatttccttattcatatcctt-aaccagtgtctc-ggggcaccggttagcatttccc 43637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 526 - 612
Target Start/End: Complemental strand, 22567684 - 22567599
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||| |   |||||| | ||||||||||||||||    
T  22567684 acaatttcaatacattaactactatataatttcttttttcatatcctt-aaccagtgtcttaggggcatcagttagcatttcccttt 22567599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 526 - 615
Target Start/End: Complemental strand, 2898153 - 2898066
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctttaat 615  Q
    ||||||||||||||||||||||||||||||||  ||||||||| |||| ||||||||  || ||| ||||||||| ||||||||||||||    
T  2898153 acaatttcaatgcattaactactatataattttctttttcatatcctt-aaccagtgttcc-gggacaccggttaacatttccctttaat 2898066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 26387168 - 26387252
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| ||| ||| |  ||| |||||| |||||||||||||||    
T  26387168 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aacaagtacttcggaggcaccagttagcatttccctt 26387252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 34442636 - 34442719
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||||||||||||||||||||||||| |  ||||||||| |||| |||  ||||||| ||||||||||||||||||||||||    
T  34442636 acaatttcaatgcattaactactatataatcttctttttcatatcctt-aacatgtgcccc-ggggcaccggttagcatttccctt 34442719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 38590978 - 38591062
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||| ||| ||||||||||| ||||||||| |||||||||  ||||| |||||||||| ||| ||||||||||||||||||||    
T  38590978 acaattttaatacattaactactgtataatttcctttttcatattcttaa-ccagtgccccagggacaccggttagcatttccctt 38591062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 8969514 - 8969591
Alignment:
Q  529 atttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||||||||||||||||||||  ||||||||| |||| ||| |||||||  ||||||| ||||||||||||||    
T  8969514 atttcaatgcattaactactatataattttctttttcatatcctt-aactagtgccc--ggggcactggttagcatttccc 8969591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 613
Target Start/End: Original strand, 11021326 - 11021411
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttta 613  Q
    |||||||||||||||||||||| ||||||||||||||||||||  ||| || |||||| || | |||||| |||| ||||||||||||    
T  11021326 acaatttcaatgcattaactaccatataatttcttttttcata-tctttaatcagtgctcc-gaggcaccagttaacatttcccttta 11021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 575 - 611
Target Start/End: Original strand, 35851921 - 35851957
Alignment:
Q  575 aaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||||||||||||||||||||||||||||||||    
T  35851921 aaccagtgccccgggggcaccggttagcatttccctt 35851957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 528 - 611
Target Start/End: Original strand, 4022585 - 4022666
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||| ||||||||||||| |||||||||||||||||  ||||| | |||  |||| ||||||| |||||||||||||||    
T  4022585 aatttcaatacattaactactat-taatttcttttttcatattcttaatc-agtatcccgtgggcaccagttagcatttccctt 4022666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 535 - 606
Target Start/End: Complemental strand, 5881290 - 5881221
Alignment:
Q  535 atgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcattt 606  Q
    |||||||||||||||||||||||| ||||||||| |||| |||| |||| || ||| |||||||||||||||    
T  5881290 atgcattaactactatataatttcctttttcatatcctt-aacctgtgctcc-gggacaccggttagcattt 5881221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 524 - 606
Target Start/End: Complemental strand, 28601050 - 28600971
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcattt 606  Q
    |||||||||||||||| |||||||| ||||||| | ||||||||| |||| ||||||||||||  |||||| |||||||||||    
T  28601050 atacaatttcaatgca-taactactttataattccctttttcatatcctt-aaccagtgcccc-cgggcactggttagcattt 28600971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 564
Target Start/End: Complemental strand, 39531906 - 39531868
Alignment:
Q  526 acaatttcaatgcattaactactatataatttctttttt 564  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  39531906 acaatttcaatgcattaactactatataatttccttttt 39531868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 5093643 - 5093692
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||| ||||||    
T  5093643 acaattttaatgcattaactactatttaatttcctttttcatatccttaa 5093692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 27584820 - 27584771
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    ||||||||||||| |||||||||||||||||||  |||||||| ||||||    
T  27584820 acaatttcaatgctttaactactatataatttcccttttcatatccttaa 27584771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 530 - 611
Target Start/End: Original strand, 44854448 - 44854528
Alignment:
Q  530 tttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||||| ||| ||  |||||||||| |||||  || |||||| ||||||||||||| | |||||||||||||||||||    
T  44854448 tttcaatgcaataattaacatataatttcctttttattatccttaa-ccagtgccccgggagtaccggttagcatttccctt 44854528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 38296259 - 38296178
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||| ||||| |||||||||||||  |||||||||  ||| ||||||||||||   | ||||||||||||||||||    
T  38296259 acaatttcaatgtattaattactatataattttctttttcata-tctttaaccagtgcccc-aagacaccggttagcatttccc 38296178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 44854387 - 44854310
Alignment:
Q  530 tttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||| ||| || ||||||||||| |||||  || |||||| |||| | ||||||||||||||||||||||||||    
T  44854387 tttcaatgcaataattaatatataatttcctttttattatccttaa-ccag-gacccgggggcaccggttagcatttccc 44854310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 564
Target Start/End: Original strand, 15079062 - 15079100
Alignment:
Q  526 acaatttcaatgcattaactactatataatttctttttt 564  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  15079062 acaatttcaatacattaactactatataatttccttttt 15079100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 530 - 607
Target Start/End: Original strand, 16807332 - 16807409
Alignment:
Q  530 tttcaatgcattaactactatataa-tttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttc 607  Q
    |||||||||| |||||||||||||| |||||||||  | | |||| ||||| |||| ||| ||||||||||||||||||    
T  16807332 tttcaatgcaataactactatataattttctttttaaacatcctt-aaccaatgcctcggaggcaccggttagcatttc 16807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 530 - 607
Target Start/End: Original strand, 16846613 - 16846690
Alignment:
Q  530 tttcaatgcattaactactatataa-tttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttc 607  Q
    |||||||||| |||||||||||||| |||||||||  | | |||| ||||| |||| ||| ||||||||||||||||||    
T  16846613 tttcaatgcaataactactatataattttctttttaaacatcctt-aaccaatgcctcggaggcaccggttagcatttc 16846690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 485 - 527
Target Start/End: Original strand, 34442532 - 34442574
Alignment:
Q  485 agggtcctactaaccggtgcccccgggcaccggttaagcatac 527  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||    
T  34442532 agggtcctgctaaccgatgcccccgggcactggttaagcatac 34442574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 530 - 564
Target Start/End: Complemental strand, 35506774 - 35506740
Alignment:
Q  530 tttcaatgcattaactactatataatttctttttt 564  Q
    |||||||||| ||||||||||||||||||||||||    
T  35506774 tttcaatgcaataactactatataatttctttttt 35506740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 529 - 575
Target Start/End: Original strand, 35851858 - 35851904
Alignment:
Q  529 atttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    |||||||||||||||||| ||||||||||| ||||||| | ||||||    
T  35851858 atttcaatgcattaactattatataatttcctttttcacatccttaa 35851904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 530 - 607
Target Start/End: Complemental strand, 44331818 - 44331741
Alignment:
Q  530 tttcaatgcattaactactatataatttcttttttca-tacccttaaaccagtgccccgggggcaccggttagcatttc 607  Q
    |||||||||| ||| |||||||||| ||||||||| | || |||||| | |||||||||||||||||| ||| ||||||    
T  44331818 tttcaatgcaataattactatataaattctttttttagtaaccttaa-ctagtgccccgggggcaccgattaacatttc 44331741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 578 - 611
Target Start/End: Complemental strand, 5431666 - 5431633
Alignment:
Q  578 cagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||| ||||||||||    
T  5431666 cagtgccccgggggcaccggttaacatttccctt 5431633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 575 - 608
Target Start/End: Complemental strand, 29771450 - 29771417
Alignment:
Q  575 aaccagtgccccgggggcaccggttagcatttcc 608  Q
    ||||||||||||||||||| ||||||||||||||    
T  29771450 aaccagtgccccgggggcatcggttagcatttcc 29771417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 606
Target Start/End: Original strand, 31782673 - 31782749
Alignment:
Q  530 tttcaatgcattaactactatataatttcttttttcat-acccttaaaccagtgccccgggggcaccggttagcattt 606  Q
    |||||||||| ||| || |||||||||||| |||| || | |||||| || ||||||||||| |||||||||||||||    
T  31782673 tttcaatgcaataattaatatataatttctctttttattatccttaatcc-gtgccccggggacaccggttagcattt 31782749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 4e-31; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 42770094 - 42770178
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  42770094 acaatttcaatgcattaactactatataatttcctttttcataccatt-aaccagtgccccgggggcaccggttagcatttccctt 42770178  T

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Target: chr1; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 29210495 - 29210412
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  29210495 acaatttcaatgcattaactactatataatttcctttttcataccctt-aaccagtgccccggaggcaccggttagcatttccct 29210412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 526 - 612
Target Start/End: Complemental strand, 18043244 - 18043159
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| |||||||||||||||||||||||    
T  18043244 acaatttcaatgcattaactactatataatttccttttttataccctt-aaccagtgccccggaggcaccggttagcatttcccttt 18043159  T

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Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 524 - 610
Target Start/End: Complemental strand, 29657855 - 29657770
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| |||| ||||||||||||||||||||||||||||||||||||    
T  29657855 atacaatttcaatgcattaactactatataatttccttttttatatcctt-aaccagtgccccgggggcaccggttagcatttccct 29657770  T

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Target: chr1; HSP #5
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 526 - 614
Target Start/End: Original strand, 12072166 - 12072253
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctttaa 614  Q
    |||||||||||||||||||||||| |||||||| ||||||||| |||| |||| ||||||||||||||||||||||||||| |||||||    
T  12072166 acaatttcaatgcattaactactacataatttcctttttcatatcctt-aaccggtgccccgggggcaccggttagcattttcctttaa 12072253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 528 - 612
Target Start/End: Complemental strand, 30657688 - 30657605
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    |||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||| ||||||||||||||||||||||    
T  30657688 aatttcaatgcattaactactatataatttcttttttcatatgctt-aactagtgccccgggagcaccggttagcatttcccttt 30657605  T

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Target: chr1; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 17333386 - 17333467
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  17333386 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccagtg-cccgggggcaccggttagcatttccc 17333467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 24178567 - 24178649
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  24178567 acaatttcaatgcattaactattatataatttcctttttcatatcctt-aaccagtgccccgggggcatcggttagcatttccc 24178649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 38162932 - 38162850
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||| ||||||||||| ||||||||    
T  38162932 acaatttcaatgcattaactactatataattttctttttcataccctt-aaccagtgccccggaggcaccggttaacatttccc 38162850  T

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Target: chr1; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 528 - 607
Target Start/End: Original strand, 38702039 - 38702117
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttc 607  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  38702039 aatttcaatgcattaactactatatagtttcctttttcataccctt-aaccagtgccccgggagcaccggttagcatttc 38702117  T

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Target: chr1; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 526 - 613
Target Start/End: Original strand, 51368889 - 51368975
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttta 613  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || || |||||||||||||||||||||    
T  51368889 acaatttcaatgcattaactactatataatttcctttttcataccctt-aaccagtaccctggaggtaccggttagcatttcccttta 51368975  T

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Target: chr1; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 14350381 - 14350465
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||| |||||||||||||| |||||||||| |||||||||||||| |||| |||| |||||||||||||||||||||||||||    
T  14350381 acaattttaatgcattaactacaatataatttcctttttcataccctt-aaccggtgctccgggggcaccggttagcatttccctt 14350465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 15227821 - 15227737
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||||||||||||| |||||||||||||| ||||||||| |||| |||||||||||| |||| |||||||||||||||||||    
T  15227821 acaatttcaatgcattaattactatataatttcctttttcatatcctt-aaccagtgcccccggggtaccggttagcatttccctt 15227737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 13961293 - 13961211
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    |||||||||||||||||||||||||||||||| |||||| ||| |||| |||| |||||||||||||||||||||||||||||||    
T  13961293 acaatttcaatgcattaactactatataattt-tttttttatatcctt-aacccgtgccccgggggcaccggttagcatttccct 13961211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 524 - 611
Target Start/End: Complemental strand, 29683280 - 29683193
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttc-ttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||| | |||| |||||||||||||||||||||||||||||||||||    
T  29683280 atacgatttcaatgcattaactactatataatttcctttttttatatctttaa-ccagtgccccgggggcaccggttagcatttccctt 29683193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 5694403 - 5694321
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||||||||||||||||||||||||  |||| ||| |||| |||||||||||||| ||||||||||||||||||||    
T  5694403 acaatttcaatgcattaactactatataatttccctttttatatcctt-aaccagtgccccggaggcaccggttagcatttccc 5694321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 612 - 716
Target Start/End: Original strand, 46119661 - 46119765
Alignment:
Q  612 taatctatacctattaataaaaggcaatacaattttttggtgtagcnnnnnnnnn-aaatcccaaaatgcccttacttgatgttagttagcagttttatc 710  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| |          ||||||||||||||||||||||||||||||||||||||||||||    
T  46119661 taatctatacctattaataaa-ggcaatactattttttggtgtaacatttttttgtaaatcccaaaatgcccttacttgatgttagttagcagttttatc 46119759  T
Q  711 aaaaac 716  Q
    ||||||    
T  46119760 aaaaac 46119765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 526 - 612
Target Start/End: Original strand, 51065852 - 51065937
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    ||||||||||| ||||||||||||||||||||  ||||||||| |||| |||||||| ||||||| |||||||||||||||||||||    
T  51065852 acaatttcaatacattaactactatataatttactttttcatatcctt-aaccagtgtcccggggacaccggttagcatttcccttt 51065937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 9266832 - 9266916
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||||||||||||| |||||||||||||| ||||||||| |||| |||||||||| ||||| ||||||||| ||||||||||    
T  9266832 acaatttcaatgcattaaatactatataatttcctttttcatatcctt-aaccagtgccgcggggacaccggttaacatttccctt 9266916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 3784817 - 3784899
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||| | |||||||||| || |||||||||    
T  3784817 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccagtgcactgggggcaccgatttgcatttccc 3784899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 30294485 - 30294567
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| ||||| ||| |||||| ||||| ||||||||||||    
T  30294485 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccaatgctccggggacaccgattagcatttccc 30294567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 526 - 612
Target Start/End: Complemental strand, 47010075 - 47009990
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    ||||||||||| ||||||||||||||||||||| ||||||||| |||| ||||||||| ||||  |||||| |||||||||||||||    
T  47010075 acaatttcaatacattaactactatataatttcctttttcatatcctt-aaccagtgctccggatgcaccgattagcatttcccttt 47009990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 526 - 614
Target Start/End: Complemental strand, 6770419 - 6770332
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctttaa 614  Q
    ||||||||||| ||||||||||||||||||||| ||||||||| |||| ||  |||||||||| |||||||||||||  ||||||||||    
T  6770419 acaatttcaatacattaactactatataatttcctttttcatatcctt-aattagtgccccggaggcaccggttagccattccctttaa 6770332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 45431360 - 45431278
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||| ||||||||||||||||||||| ||||||||| |||| || ||| |||| ||||||||||||||||||||||||    
T  45431360 acaatttcaatacattaactactatataatttcctttttcatatcctt-aatcag-gccctgggggcaccggttagcatttccct 45431278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 47532774 - 47532857
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||||||||||||  ||||||||| ||||||  |||| | |||| | ||||||||||||||||||||    
T  47532774 acaatttcaatgcattaactactatataattttctttttcatatccttaa--cagtactccggagacaccggttagcatttccctt 47532857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 528 - 609
Target Start/End: Complemental strand, 3097739 - 3097659
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||| ||||||  | |||||||||||  ||||||||||||    
T  3097739 aatttcaatgcattaactactatataatttcctttttcatatcctt-aaccaggactccgggggcaccaattagcatttccc 3097659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 35985725 - 35985808
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| ||||||| |||||  || ||||||||||||| ||||||||||    
T  35985725 acaatttcaatgcattaactactatataatttccttttttatatccttaaa-cagtgatcc-ggggcaccggttaacatttccctt 35985808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 526 - 610
Target Start/End: Original strand, 19031919 - 19032002
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||  ||||||||||||||||||| ||||||||| |||| ||| | |||||| || ||||||||||||||||||||    
T  19031919 acaatttcaatgttttaactactatataatttcctttttcatatcctt-aactaatgcccccggagcaccggttagcatttccct 19032002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 534 - 608
Target Start/End: Original strand, 19011108 - 19011180
Alignment:
Q  534 aatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcc 608  Q
    ||||||||||||||||||||||||| ||||||||| |||| |||| ||||||| ||| |||||||||||||||||    
T  19011108 aatgcattaactactatataatttcctttttcatatcctt-aacccgtgcccc-gggacaccggttagcatttcc 19011180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 41730390 - 41730303
Alignment:
Q  526 acaatttcaatgcattaa---ctactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||   |||||||||||||||||||||||||  ||| |||| ||||||| |||||||||||||  |||||||||    
T  41730390 acaatttcaatgcattaattactactatataatttcttttttcatattctt-aacccgtgcccctggggcaccggttaagatttccctt 41730303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 526 - 607
Target Start/End: Original strand, 36446429 - 36446508
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttc 607  Q
    ||||||||||||||||||||||||||||||||| ||||| |||  ||| |||||||||| |||||||||| |||| ||||||    
T  36446429 acaatttcaatgcattaactactatataatttccttttt-atattctt-aaccagtgcctcgggggcaccagttaacatttc 36446508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 48071564 - 48071482
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||||||||||| ||||||||||| |||| |||| |||| ||||||| |||| || ||| ||||||||||||||||    
T  48071564 acaatttcaatgcattaactattatataatttccttttacatatcctt-aaccagtacccc-ggagcatcggttagcatttccct 48071482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 524 - 607
Target Start/End: Original strand, 23473566 - 23473648
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttc 607  Q
    ||||||||||||| |||||||| ||||||||| || ||||||||| |||| ||||| |||||| |||||| | |||||||||||    
T  23473566 atacaatttcaatacattaactgctatataatctcctttttcatatcctt-aaccaatgccccaggggcatcagttagcatttc 23473648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 524 - 611
Target Start/End: Complemental strand, 52749686 - 52749600
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||||  ||| ||||| ||||||| ||  | |||||||||||||||||    
T  52749686 atacaatttcaatacattaactattatataatttcctttttcata-tctttaaccaatgccccgcggatatcggttagcatttccctt 52749600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 530 - 611
Target Start/End: Original strand, 28726013 - 28726094
Alignment:
Q  530 tttcaatgcattaactactatataatttcttttttcat-acccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||||| ||| ||  |||||||||| ||||| || | |||||| |||||||||||||||||||||||||||||||||||    
T  28726013 tttcaatgcaataattaacatataatttccttttttattatccttaa-ccagtgccccgggggcaccggttagcatttccctt 28726094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 526 - 612
Target Start/End: Original strand, 39912383 - 39912468
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    ||||||||||||||||||||| |||||||||||  |||| ||| |||| || |||||||||| | || ||||||| |||||||||||    
T  39912383 acaatttcaatgcattaactagtatataatttccctttttatatcctt-aatcagtgccccgagtgcgccggttaacatttcccttt 39912468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 528 - 611
Target Start/End: Complemental strand, 26228273 - 26228193
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||||||||||| ||||| ||  |||| |||||||||  ||||||  |||||||||||| |||||    
T  26228273 aatttcaatgcattaactactatataatttcattttttatctcctt-aaccagtgcttcggggg--ccggttagcattaccctt 26228193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 528 - 611
Target Start/End: Complemental strand, 43286802 - 43286720
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||  ||||||||| ||||||||||| ||||||||| |||| |||||||| ||| ||| || |||||||||||| ||||    
T  43286802 aatttcaaaacattaactattatataatttcctttttcatatcctt-aaccagtgtcccagggacatcggttagcattttcctt 43286720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 575 - 609
Target Start/End: Original strand, 38595905 - 38595939
Alignment:
Q  575 aaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||||||||||||||||||||||||||    
T  38595905 aaccagtgccccgggggcaccggttagcatttccc 38595939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 576
Target Start/End: Original strand, 50128276 - 50128326
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaa 576  Q
    ||||||||||||||||||||||||| ||||||  ||||||||| |||||||    
T  50128276 acaatttcaatgcattaactactatgtaattttctttttcatatccttaaa 50128326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 564
Target Start/End: Complemental strand, 52431663 - 52431625
Alignment:
Q  526 acaatttcaatgcattaactactatataatttctttttt 564  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  52431663 acaatttcaatgcattaactactatataatttttttttt 52431625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 606
Target Start/End: Original strand, 48383218 - 48383294
Alignment:
Q  529 atttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcattt 606  Q
    |||||||| ||||||||   |||||||||  ||||||| | |||||| ||||||||||||| ||||||||||||||||    
T  48383218 atttcaatacattaactttcatataattttctttttcacatccttaa-ccagtgccccgggagcaccggttagcattt 48383294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 528 - 608
Target Start/End: Original strand, 10976008 - 10976087
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcc 608  Q
    ||||| |||||||||||||||||||||| || ||||||||| |||| ||| |||||| | | | |||||| ||||||||||    
T  10976008 aattttaatgcattaactactatataatctcctttttcatatcctt-aacaagtgcctcagagacaccggctagcatttcc 10976087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 528 - 564
Target Start/End: Original strand, 37315373 - 37315409
Alignment:
Q  528 aatttcaatgcattaactactatataatttctttttt 564  Q
    ||||||||||||||||||||||||||||||| |||||    
T  37315373 aatttcaatgcattaactactatataatttccttttt 37315409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 613
Target Start/End: Complemental strand, 12306999 - 12306914
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttta 613  Q
    |||||||||||| ||||||||| |||||||||  |||||| || | |||| | || ||||| | ||||||||||||||||||||||||    
T  12306999 acaatttcaatgtattaactac-atataattttctttttcgtatcattaa-ctagagccccagaggcaccggttagcatttcccttta 12306914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 38335251 - 38335170
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||| ||||||||||| |||||||||||||| |||||||||  ||| |||||||| |||   | ||||||||||||||||||    
T  38335251 acaattacaatgcattaattactatataatttcctttttcata-tctttaaccagtgtccc-aagacaccggttagcatttccc 38335170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 39497387 - 39497340
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    ||||| ||||||||||||||||||||||||  ||||||||| ||||||    
T  39497387 aattttaatgcattaactactatataattttctttttcatatccttaa 39497340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 485 - 527
Target Start/End: Original strand, 14350278 - 14350320
Alignment:
Q  485 agggtcctactaaccggtgcccccgggcaccggttaagcatac 527  Q
    |||||||| |||||||||||||| |||||| ||||||||||||    
T  14350278 agggtcctgctaaccggtgccccggggcactggttaagcatac 14350320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 575 - 609
Target Start/End: Original strand, 52702298 - 52702332
Alignment:
Q  575 aaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||| |||||||||||||||||||    
T  52702298 aaccagtgccccgggagcaccggttagcatttccc 52702332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 8473018 - 8473067
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    ||||||| ||||||||||||| ||||||||||| ||||| ||| ||||||    
T  8473018 acaattttaatgcattaactattatataatttccttttttatatccttaa 8473067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 15282618 - 15282667
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    |||||||||||  |||||||||||||||||||  ||||||||| ||||||    
T  15282618 acaatttcaatatattaactactatataattttctttttcatatccttaa 15282667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 526 - 610
Target Start/End: Original strand, 53789 - 53872
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  53789 acaattttaatgcattaactactatataatttcctttttcataccctt-aaccagtgccccgggggcaccggttagcatttccct 53872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 526 - 614
Target Start/End: Complemental strand, 13661890 - 13661803
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctttaa 614  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||    
T  13661890 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccagtgctccgggggcaccggttagcatttccctttaa 13661803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 10070051 - 10069969
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  10070051 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccagtgccccgggggcaccggttagcatttccc 10069969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 35504344 - 35504426
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  35504344 acaatttcaatgcattaactactatataatttcctttttcataccctt-aaccagtgtcccgggggcaccggttagcatttccc 35504426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 8787421 - 8787337
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||| ||||||||||||||||||||    
T  8787421 acaatttcaatgcattaactactatataatttcatttttcataccctt-aaccaatgccccggggacaccggttagcatttccctt 8787337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 10054456 - 10054540
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10054456 acaatttcaatgcattaattattatataatttcctttttcataccctt-aaccagtgccccgggggcaccggttagcatttccctt 10054540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 34650937 - 34651018
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  34650937 acaatttcaatgcattaactactatataatttcctttttcataccctt-aaccagtg-cccgggggcaccggttagcatttccc 34651018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 526 - 613
Target Start/End: Complemental strand, 35132604 - 35132518
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttta 613  Q
    |||||||||||| |||||||||||||||||||| ||||||||| |||| |||||||| ||||||||||||||||||||||||||||||    
T  35132604 acaatttcaatgtattaactactatataatttcctttttcatatcctt-aaccagtgtcccgggggcaccggttagcatttcccttta 35132518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 524 - 611
Target Start/End: Original strand, 19647760 - 19647846
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||| |  |||||||||||||| ||||    
T  19647760 atacaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccagtgccccggagataccggttagcattttcctt 19647846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 524 - 612
Target Start/End: Complemental strand, 13470235 - 13470148
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    |||||||||||||||||| |||||||||| ||||| ||||||||| |||| ||||||||||||   |||||||||||||||||||||||    
T  13470235 atacaatttcaatgcattgactactatattatttcctttttcatatcctt-aaccagtgccccataggcaccggttagcatttcccttt 13470148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 11958071 - 11958153
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||  ||| |||| ||||||||||||||||||||||||||||||    
T  11958071 acaatttcattgcattaactactatataatttccttttttata-tctttaacctgtgccccgggggcaccggttagcatttccc 11958153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 12506378 - 12506296
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||| ||| ||||| || | ||||||||||||||||||||    
T  12506378 acaatttcaatgcattaactactatataatttcctttttcatactctt-aacgagtgctccagaggcaccggttagcatttccc 12506296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 39069462 - 39069379
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||| ||||||||||| ||  |||||||||||||||||||||    
T  39069462 acaattttaatgcattaactactatataatttc-cttttcataccctt-aaccagtgccctggaagcaccggttagcatttccctt 39069379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 4837339 - 4837256
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||||||||||||| |||||||||||||| |||||||||  ||| |||| ||||||| ||||||||||||| ||||||||||    
T  4837339 acaatttcaatgcattaattactatataatttcctttttcatattctt-aaccggtgcccc-ggggcaccggttaacatttccctt 4837256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 6283644 - 6283562
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||||||||| || ||||||||||  ||||||||| | |||| | |||||||||| ||||||||||||||||||||    
T  6283644 acaatttcaatgcattaattattatataattttctttttcatatctttaa-ctagtgccccggaggcaccggttagcatttccc 6283562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 21547498 - 21547579
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| |||| ||||  || ||||||| ||||||||||||||||||    
T  21547498 acaatttcaatgcattaactactatataatttccttttttatatcctt-aaccgatg-cccggggacaccggttagcatttccc 21547579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 526 - 608
Target Start/End: Complemental strand, 20175309 - 20175228
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcc 608  Q
    ||||||||||||||||||||||||||||||||||||||| |||   || |||||||| | ||| | |||||||||||||||||    
T  20175309 acaatttcaatgcattaactactatataatttctttttttata-tttttaaccagtgtctcggagacaccggttagcatttcc 20175228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 9721711 - 9721793
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    |||||||||||||||||| |||||||||||||| |||||||||  ||| |||||||  |||| || ||||||||| ||||||||    
T  9721711 acaatttcaatgcattaattactatataatttcctttttcatattctt-aaccagtagcccgaggacaccggttaacatttccc 9721793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 613
Target Start/End: Complemental strand, 31909713 - 31909628
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttta 613  Q
    |||||||||||||||||||||||||||||||||  |||| ||| |||| |||||||   |||| ||||||||||| ||||||||||||    
T  31909713 acaatttcaatgcattaactactatataatttcccttttaatatcctt-aaccagt-atccggaggcaccggttaacatttcccttta 31909628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 40564508 - 40564557
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    ||||||||||||||||||||||||||||||||| ||||||| | ||||||    
T  40564508 acaatttcaatgcattaactactatataatttcctttttcaaatccttaa 40564557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 606
Target Start/End: Complemental strand, 11846154 - 11846075
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcattt 606  Q
    |||||||||||| |||||||||||||||||||| ||||| ||| |||| | | |||| ||||||| ||||| |||||||||    
T  11846154 acaatttcaatgtattaactactatataatttccttttttatatcctt-agctagtgtcccggggacaccgcttagcattt 11846075  T

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Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 19436938 - 19436989
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    ||||||||||||||| ||||| ||||||||||||| ||||||||| ||||||    
T  19436938 atacaatttcaatgctttaaccactatataatttcctttttcatatccttaa 19436989  T

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Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 40057391 - 40057340
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    |||| ||||||||||| |||||||||||||||||| ||||||||| ||||||    
T  40057391 atactatttcaatgcactaactactatataatttcctttttcatatccttaa 40057340  T

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Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 608
Target Start/End: Original strand, 2619661 - 2619742
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcc 608  Q
    ||||||||||| |||||||||||| |||||||  ||||||||| |||| ||| |||| ||||| | |||| ||||||||||||    
T  2619661 acaatttcaatacattaactactaaataattttctttttcatatcctt-aacaagtgtcccggagacaccagttagcatttcc 2619742  T

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Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 575 - 612
Target Start/End: Original strand, 21945013 - 21945050
Alignment:
Q  575 aaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    |||||||||||||| |||||||||||||||||||||||    
T  21945013 aaccagtgccccggaggcaccggttagcatttcccttt 21945050  T

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Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 485 - 527
Target Start/End: Original strand, 35504240 - 35504282
Alignment:
Q  485 agggtcctactaaccggtgcccccgggcaccggttaagcatac 527  Q
    |||||||| ||||||||||||||||| ||| ||||||||||||    
T  35504240 agggtcctgctaaccggtgcccccggacacgggttaagcatac 35504282  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 577 - 610
Target Start/End: Complemental strand, 20983552 - 20983519
Alignment:
Q  577 ccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||||||||||||||||||| ||||    
T  20983552 ccagtgccccgggggcaccggttagcattaccct 20983519  T

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Target: scaffold0014 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 68394 - 68478
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||| ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||| |||||||||||||||    
T  68394 acaattttaatgcattaactactatataatttcatttttcatatcctt-aaccagtgccccgggggcaccagttagcatttccctt 68478  T

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Target: scaffold0264 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 23043 - 22959
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||||||| ||||| |||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||||||||||    
T  23043 acaatttcaatgtattaattactatataatttcctttttcatatcctt-aaccagtgctccgggggcaccggttagcatttccctt 22959  T

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Target: scaffold0021 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 526 - 611
Target Start/End: Complemental strand, 116286 - 116202
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||||||||||||||||||||||||||| |||||||||  ||| |||| ||||||||||||||||||||||||||| ||||    
T  116286 acaatttcaatgcattaactactatataatttcctttttcata-tctttaacctgtgccccgggggcaccggttagcattttcctt 116202  T

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Target: scaffold0190 (Bit Score: 56; Significance: 8e-23; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 14978 - 14896
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||| ||||||||||||||||||||||||||||| |||  ||| |||||||||||||||| ||||||||||||||||||    
T  14978 acaatttcagtgcattaactactatataatttctttttttata-tctttaaccagtgccccggggacaccggttagcatttccc 14896  T

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Target: scaffold0188 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 526 - 608
Target Start/End: Original strand, 6214 - 6295
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcc 608  Q
    |||||| ||||||||||||||||||||| |||| ||||||||| |||| |||||||||||| |||||||||||||||||||||    
T  6214 acaattccaatgcattaactactatatagtttcctttttcatatcctt-aaccagtgccccaggggcaccggttagcatttcc 6295  T

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Target: scaffold0045 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 609
Target Start/End: Complemental strand, 50632 - 50548
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||  ||| |||||||||||||| ||||||||||| ||||||||    
T  50632 atacaatttcaaaacattaactactatataatttcctttttcata-tctttaaccagtgccccggaggcaccggttaacatttccc 50548  T

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Target: scaffold0045; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 53448 - 53499
Alignment:
Q  524 atacaatttcaatgcattaactactatataatttcttttttcatacccttaa 575  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| ||||||    
T  53448 atacaatttcaatgcattaactactatataatttccttttttatatccttaa 53499  T

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Target: scaffold0206 (Bit Score: 46; Significance: 8e-17; HSPs: 2)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 526 - 610
Target Start/End: Original strand, 11074 - 11155
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||| ||  |||||||| ||||||||||||||    
T  11074 acaatttcaatgcattaactaatatataatttcctttttcatatcctt-aaccagtgtcc--ggggcaccagttagcatttccct 11155  T

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Target: scaffold0206; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 486 - 527
Target Start/End: Original strand, 10990 - 11031
Alignment:
Q  486 gggtcctactaaccggtgcccccgggcaccggttaagcatac 527  Q
    ||||||| ||||| |||||||||||||||| |||||||||||    
T  10990 gggtcctgctaactggtgcccccgggcaccagttaagcatac 11031  T

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Target: scaffold0002 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 526 - 611
Target Start/End: Original strand, 147009 - 147093
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    |||||||||||| |||||||||||||||||||| ||||||||| |||| ||| ||  |||| || |||||||||||||||||||||    
T  147009 acaatttcaatgtattaactactatataatttcctttttcatatcctt-aactagaaccccaggagcaccggttagcatttccctt 147093  T

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Target: scaffold1152 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 760 - 677
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    |||||||||||| |||||||||||||||||||| |||||||||  ||| |||| |||| | |||||||||| |||||||||||||    
T  760 acaatttcaatggattaactactatataatttcctttttcata-tctttaacccgtgctctgggggcaccgattagcatttccct 677  T

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Target: scaffold0674 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 526 - 590
Target Start/End: Original strand, 8001 - 8064
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggg 590  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||    
T  8001 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccagtgcccggggg 8064  T

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Target: scaffold0549 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 526 - 590
Target Start/End: Complemental strand, 7370 - 7307
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggg 590  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||    
T  7370 acaatttcaatgcattaactactatataatttcctttttcatatcctt-aaccagtgcccggggg 7307  T

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Target: scaffold0524 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 609
Target Start/End: Complemental strand, 907 - 825
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccc 609  Q
    ||||||||||||||||||||||||||||||||  ||||||||| |||| ||| ||||| ||||  ||||||| |||||||||||    
T  907 acaatttcaatgcattaactactatataattttctttttcatatcctt-aactagtgctccggaagcaccggctagcatttccc 825  T

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Target: scaffold1266 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 374 - 292
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    ||||||||||||||||||||| ||||||||||  |||||||||  ||| |||||||| ||| |||||||||||||| ||||||||    
T  374 acaatttcaatgcattaactattatataattttctttttcatatgctt-aaccagtg-ccctggggcaccggttaggatttccct 292  T

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Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 528 - 611
Target Start/End: Original strand, 95690 - 95772
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccctt 611  Q
    ||||||||| |||||| || ||||||||||| |||||||||  ||| ||||||| || ||||||||||||||||||||| ||||    
T  95690 aatttcaattcattaattattatataatttcctttttcatattctt-aaccagtacctcgggggcaccggttagcattttcctt 95772  T

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Target: scaffold0263 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 610
Target Start/End: Original strand, 19689 - 19771
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttccct 610  Q
    |||||||||||||||||| || |||||||||||||||||||||  ||||| ||| || ||| |||||||||||||  ||||||||    
T  19689 acaatttcaatgcattaattattatataatttcttttttcatatgcttaaccca-tg-ccctggggcaccggttatgatttccct 19771  T

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Target: scaffold0325 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 612
Target Start/End: Original strand, 17574 - 17657
Alignment:
Q  526 acaatttcaatgcattaactactatataatttcttttttcatacccttaaaccagtgccccgggggcaccggttagcatttcccttt 612  Q
    ||||||||||||||||| ||||||||||||||  ||||||||| || |||| ||||||| | ||| || ||||||||||||||||||    
T  17574 acaatttcaatgcattagctactatataattttctttttcatatccgtaaa-cagtgcctc-gggaca-cggttagcatttcccttt 17657  T

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Target: scaffold0113 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 528 - 568
Target Start/End: Complemental strand, 40999 - 40959
Alignment:
Q  528 aatttcaatgcattaactactatataatttcttttttcata 568  Q
    ||||||||||||||||||| ||||||||||| |||||||||    
T  40999 aatttcaatgcattaactattatataatttcatttttcata 40959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 564
Target Start/End: Complemental strand, 1453 - 1415
Alignment:
Q  526 acaatttcaatgcattaactactatataatttctttttt 564  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  1453 acaatttcaatgcaataactattatataatttctttttt 1415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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