View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4432_low_7 (Length: 377)
Name: NF4432_low_7
Description: NF4432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4432_low_7 |
 | |
|
| [»] scaffold0168 (1 HSPs) |
| | |
|
| [»] scaffold0019 (1 HSPs) |
| | |
|
| [»] scaffold0012 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 344; Significance: 0; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 1 - 360
Target Start/End: Original strand, 22972568 - 22972927
Alignment:
| Q |
1 |
cttttctgcatttgataagaagaatttgattcgtttagctgaattttatccttcagaattttttcctgttcaacttccggaactagattctcaacttgaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
22972568 |
cttttctgcatttgataagaagaatttgattcgtttagctgaattttatccttcagaattttctcctgttcaacttttggaactagattctcaacttgaa |
22972667 |
T |
|
| Q |
101 |
aattatattgtagatgtatgctctgaagatgcattttatgcattagaggggattggtgatttgagtataaagatggtggagacaaggagacatattgtgt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22972668 |
aattatattgtagatgtatgctctgaagatgcattttatgaattagaggggattggtgatttgagtataaagatggtggagacaaggagacatattgtgt |
22972767 |
T |
|
| Q |
201 |
atccgttggtatatttgcttttaaagttatctttgatactacctgtggcaactgcaacagctgaaagagctttctcagctatgaagattatcaagactca |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22972768 |
atccgttggtatatttgcttttaaagttatctttgatactacctgtggcaactgcaacagctgaaagagctttctcagctatgaagattatcaagactca |
22972867 |
T |
|
| Q |
301 |
gttgcgaaatcgaatgggtgatcaatggttaaatgattgtctagttacttatatatagag |
360 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22972868 |
gttgcgaaatcgaatgggtgatcaatggttaaatgattgtctagttacttatatatagag |
22972927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 22964324 - 22964650
Alignment:
| Q |
1 |
cttttctgcatttgataagaagaatttgattcgtttagctgaattttatccttcagaattttttcctgttcaacttccggaactagattctcaacttgaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
22964324 |
cttttctgcatttgataagaagaatttgattcgtttagctaaattttatccttcagaattttgtcctgttcaactattggaactagattctcaacttgaa |
22964423 |
T |
|
| Q |
101 |
aattatattgtagatgtatgctctgaagatgcattttatgcattagaggggattggtgatttgagtataaagatggtggagacaaggagacatattgtgt |
200 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22964424 |
aattatattgtagatgtatgctctgaaaatgcattttatgaattagaggggattggtgatttgagtataaagatggtggagacaaggagacatattgtgt |
22964523 |
T |
|
| Q |
201 |
atccgttggtatatttgcttttaaagttatctttgatactacctgtggcaactgcaacagctgaaagagctttctcagctatgaagattatcaagactca |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22964524 |
atccgttggtatatttgcttttaaagttatctttgatactacctgtggcaactgcaacagctgaaagagctttctcagctatgaagattatcaagactca |
22964623 |
T |
|
| Q |
301 |
gttgcgaaatcgaatgggtgatcaatg |
327 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
22964624 |
gttgcgaaatggaatgggtgatcaatg |
22964650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 26493934 - 26493898
Alignment:
| Q |
262 |
tgaaagagctttctcagctatgaagattatcaagact |
298 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
26493934 |
tgaaagagctttttcagcaatgaagattatcaagact |
26493898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 331; Significance: 0; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 2 - 360
Target Start/End: Complemental strand, 12586088 - 12585730
Alignment:
| Q |
2 |
ttttctgcatttgataagaagaatttgattcgtttagctgaattttatccttcagaattttttcctgttcaacttccggaactagattctcaacttgaaa |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
12586088 |
ttttctgcatttgataagaagaatttgattcgtttagctgaattttatccttcagaattttctcctgttcaacttttggaactagattctcaacttgaaa |
12585989 |
T |
|
| Q |
102 |
attatattgtagatgtatgctctgaagatgcattttatgcattagaggggattggtgatttgagtataaagatggtggagacaaggagacatattgtgta |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12585988 |
attatattgtagatgtatgctctgaagatgcattttatgaattagaggggattggtgatttgagtataaagatggtggagacaaggagacatattgtgta |
12585889 |
T |
|
| Q |
202 |
tccgttggtatatttgcttttaaagttatctttgatactacctgtggcaactgcaacagctgaaagagctttctcagctatgaagattatcaagactcag |
301 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12585888 |
tccgttggtatatttgcttttatagttatctttgatactacctgtggcaactgcaacagctgaaagagctttctcagctatgaagattatcaagactcag |
12585789 |
T |
|
| Q |
302 |
ttgcgaaatcgaatgggtgatcaatggttaaatgattgtctagttacttatatatagag |
360 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
12585788 |
ttgcgaaattgaatgggtgatcaatggttaaatgattgtctagttacttatatagagag |
12585730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 357
Target Start/End: Complemental strand, 26572058 - 26571696
Alignment:
| Q |
1 |
cttttctgcatttgataagaagaatttgattcgtttagctgaattttatccttcagaattttttcctgttcaacttccggaactagattctcaacttgaa |
100 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||| || ||||||||| || |||||||| |||||||||||| | ||||| ||||||| |||||| |
|
|
| T |
26572058 |
cttttctgcatttgataaggagaggttgattcgtttaactcaattttatcttttagaattttctcctgttcaactattgaaactaaattctcagcttgaa |
26571959 |
T |
|
| Q |
101 |
aattatattgtagatgtatgctctgaagatgcattttatgcattagaggggattggtgatttgagtataaagatggtggagacaaggagac----atatt |
196 |
Q |
| |
|
| |||| | ||||||||||||||||||||||||||| | |||||| || ||| ||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
26571958 |
agttatttcttagatgtatgctctgaagatgcatttttggaattagatggaattagtgatttgagtataaagatggtggagacaaggaaacatatatatt |
26571859 |
T |
|
| Q |
197 |
gtgtatccgttggtatatttgcttttaaagttatctttgatactacctgtggc-aactgcaacagctgaaagagctttctcagctatgaagattatcaag |
295 |
Q |
| |
|
|| |||| |||||||||||||||||||||||||||||||||||||| |||||| |||| |||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
26571858 |
gtatatctgttggtatatttgcttttaaagttatctttgatactacatgtggcaaactacaacagttgaaagagctttctcggctatgaagattatcaag |
26571759 |
T |
|
| Q |
296 |
actcagttgcgaaatcgaatgggtgatcaatgg-ttaaatgattgtctagttacttatatata |
357 |
Q |
| |
|
||| |||||| |||||| || | |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
26571758 |
actgagttgcaaaatcggatagatgatcaatggtttaaatgattgtctagttacttatatata |
26571696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 355
Target Start/End: Original strand, 14539500 - 14539575
Alignment:
| Q |
280 |
tatgaagattatcaagactcagttgcgaaatcgaatgggtgatcaatggttaaatgattgtctagttacttatata |
355 |
Q |
| |
|
|||||| |||||||| | |||| ||||||||||| |||| ||| | |||||||||||||| |||||| ||||||| |
|
|
| T |
14539500 |
tatgaatattatcaaaaatcagatgcgaaatcgagtgggagatgaccggttaaatgattgtttagttatttatata |
14539575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 276
Target Start/End: Complemental strand, 36974380 - 36974338
Alignment:
| Q |
234 |
tgatactacctgtggcaactgcaacagctgaaagagctttctc |
276 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||| |||||| |
|
|
| T |
36974380 |
tgatactacatgtggcaactgcaacaactgaaagagttttctc |
36974338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 311; Significance: 1e-175; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 1 - 355
Target Start/End: Complemental strand, 49601126 - 49600772
Alignment:
| Q |
1 |
cttttctgcatttgataagaagaatttgattcgtttagctgaattttatccttcagaattttttcctgttcaacttccggaactagattctcaacttgaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
49601126 |
cttttctgcatttgataagaagaatttgattcgtttagctgaattttctccttcagatttttctcctgttcaactattggaactagattctcaacttgaa |
49601027 |
T |
|
| Q |
101 |
aattatattgtagatgtatgctctgaagatgcattttatgcattagaggggattggtgatttgagtataaagatggtggagacaaggagacatattgtgt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49601026 |
aattatattgtagatgtatgctctgaagatgcattttatgaattagaggggattggtgatttgagtataaagatggtggagacaaggagacatattgtgt |
49600927 |
T |
|
| Q |
201 |
atccgttggtatatttgcttttaaagttatctttgatactacctgtggcaactgcaacagctgaaagagctttctcagctatgaagattatcaagactca |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
49600926 |
atccgttggtatatttgcttttaaagttatctttgatactacttgtggcaactgcaacagctgaaagagctttttcagctatgaagattatcaagactca |
49600827 |
T |
|
| Q |
301 |
gttgcgaaatcgaatgggtgatcaatggttaaatgattgtctagttacttatata |
355 |
Q |
| |
|
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
49600826 |
gttgcgaaatcgaatgggtgattaatggttagatgattgtctagttacttatata |
49600772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 298
Target Start/End: Original strand, 53710353 - 53710389
Alignment:
| Q |
262 |
tgaaagagctttctcagctatgaagattatcaagact |
298 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
53710353 |
tgaaagagctttttcagcaatgaagattatcaagact |
53710389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 85 - 360
Target Start/End: Original strand, 6901341 - 6901616
Alignment:
| Q |
85 |
agattctcaacttgaaaattatattgtagatgtatgctctgaagatgcattttatgcattagaggggattggtgatttgagtataaagatggtggagaca |
184 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6901341 |
agattctcaacttgaaaattatattgtagatgtatgctctgaagatgcattttatgaattagaggggattggtgatttgagtataaagatggtggagaca |
6901440 |
T |
|
| Q |
185 |
aggagacatattgtgtatccgttggtatatttgcttttaaagttatctttgatactacctgtggcaactgcaacagctgaaagagctttctcagctatga |
284 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
6901441 |
aggagacatattgtgtatccgttggtatatttgcttttaaagttatctttgatactacctgtggcaactacaacagctgaaagagctttctcagctatga |
6901540 |
T |
|
| Q |
285 |
agattatcaagactcagttgcgaaatcgaatgggtgatcaatggttaaatgattgtctagttacttatatatagag |
360 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6901541 |
agattatcaagactcagctgcgaaatcgaatggatgatcaatggttaaatgattgtctagttacttatatatagag |
6901616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 16 - 360
Target Start/End: Complemental strand, 22318905 - 22318575
Alignment:
| Q |
16 |
taagaagaatttgattcgtttagctgaattttatccttcagaattttttcctgttcaacttccggaactagattctcaacttgaaaattatattgtagat |
115 |
Q |
| |
|
|||| |||| ||||||||||||||| |||||||||||||| |||||| ||||||| || || |||||||||||||||||||||||||||||||||| |
|
|
| T |
22318905 |
taagcagaagttgattcgtttagctcaattttatccttcaaaattttctcctgtta---tt--ggcactagattctcaacttgaaaattatattgtagat |
22318811 |
T |
|
| Q |
116 |
gtatgctctgaagatgcattttatgcattagaggggattggtgatttgagtataaagatggtggagacaaggagacatattgtgtatccgttggtatatt |
215 |
Q |
| |
|
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
22318810 |
gtatgctctgaagatgcattttttgaattagaggggattggtgatttgagtataaagatggtggagaaaaggaaacatattgtgtatccgttggtatatt |
22318711 |
T |
|
| Q |
216 |
tgcttttaaagttatctttgatactacctgtggcaactgcaacagctgaaagagctttctcagctatgaagattatcaagactcagttgcgaaatcgaat |
315 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||| |||||||| | | || |||||| |||| |||| |
|
|
| T |
22318710 |
tgcttttaaagttatctttgatactacatgtg------gcaacagctgaaagagctttctcatctataaagattattatgtctgagttgcaaaattgaat |
22318617 |
T |
|
| Q |
316 |
gggtgatcaatggttaaatgattgtctagttacttatatatagag |
360 |
Q |
| |
|
||||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
22318616 |
gggtgatgaatggttaaatgattg---agttacttatatatagag |
22318575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 4075628 - 4075566
Alignment:
| Q |
275 |
tcagctatgaagattatcaagactcagttgcgaaatcgaatgggtgatcaatggttaaatgat |
337 |
Q |
| |
|
||||||||||||||| | |||| ||| || || ||| ||||||||||||||||||||||||| |
|
|
| T |
4075628 |
tcagctatgaagattgtgaagagtcatttacgtaataaaatgggtgatcaatggttaaatgat |
4075566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 298
Target Start/End: Original strand, 22464625 - 22464661
Alignment:
| Q |
262 |
tgaaagagctttctcagctatgaagattatcaagact |
298 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
22464625 |
tgaaagagctttttcagcaatgaagattatcaagact |
22464661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 298
Target Start/End: Original strand, 22483504 - 22483540
Alignment:
| Q |
262 |
tgaaagagctttctcagctatgaagattatcaagact |
298 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
22483504 |
tgaaagagctttttcagcaatgaagattatcaagact |
22483540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 298
Target Start/End: Original strand, 34526307 - 34526343
Alignment:
| Q |
262 |
tgaaagagctttctcagctatgaagattatcaagact |
298 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
34526307 |
tgaaagagctttttcagcaatgaagattatcaagact |
34526343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 52; Significance: 1e-20; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 4922994 - 4923138
Alignment:
| Q |
142 |
attagaggggattggtgatttgagtataaagatggtggagacaaggagacatattgtgtatccgttggtatatttgcttttaaagttatctttgatacta |
241 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||||||||| ||| | | ||| || || ||||||||||||| |||||| ||||||| ||||||||| |
|
|
| T |
4922994 |
attagaggggattggtaattttagtataaagatggtggagaaaagaaaatataatgcatacacgttggtatatttacttttagagttatcattgatacta |
4923093 |
T |
|
| Q |
242 |
cctgtggcaac----tgcaacagctgaaagagctttctcagctat |
282 |
Q |
| |
|
| |||| |||| ||||||| ||||||||| |||||| ||||| |
|
|
| T |
4923094 |
catgtgacaactgcatgcaacaactgaaagagatttctctgctat |
4923138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 360
Target Start/End: Original strand, 6495718 - 6495776
Alignment:
| Q |
302 |
ttgcgaaatcgaatgggtgatcaatggttaaatgattgtctagttacttatatatagag |
360 |
Q |
| |
|
||||||||||| ||| || ||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
6495718 |
ttgcgaaatcgcatgagtaatcaatgactaaatgattgtttagttacttatatatagag |
6495776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 355
Target Start/End: Complemental strand, 1112147 - 1112105
Alignment:
| Q |
313 |
aatgggtgatcaatggttaaatgattgtctagttacttatata |
355 |
Q |
| |
|
||||| |||||||||||||||||||||||| || ||||||||| |
|
|
| T |
1112147 |
aatggatgatcaatggttaaatgattgtcttgtaacttatata |
1112105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 298
Target Start/End: Original strand, 27364838 - 27364874
Alignment:
| Q |
262 |
tgaaagagctttctcagctatgaagattatcaagact |
298 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
27364838 |
tgaaagagctttttcagcaatgaagattatcaagact |
27364874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 55464880 - 55464844
Alignment:
| Q |
262 |
tgaaagagctttctcagctatgaagattatcaagact |
298 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
55464880 |
tgaaagagctttttcagcaatgaagattatcaagact |
55464844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0168 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0168
Description:
Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 298
Target Start/End: Original strand, 15769 - 15805
Alignment:
| Q |
262 |
tgaaagagctttctcagctatgaagattatcaagact |
298 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
15769 |
tgaaagagctttttcagcaatgaagattatcaagact |
15805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 135074 - 135038
Alignment:
| Q |
262 |
tgaaagagctttctcagctatgaagattatcaagact |
298 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
135074 |
tgaaagagctttttcagcaatgaagattatcaagact |
135038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 298
Target Start/End: Original strand, 197060 - 197096
Alignment:
| Q |
262 |
tgaaagagctttctcagctatgaagattatcaagact |
298 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
197060 |
tgaaagagctttttcagcaatgaagattatcaagact |
197096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 26540875 - 26540839
Alignment:
| Q |
262 |
tgaaagagctttctcagctatgaagattatcaagact |
298 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
26540875 |
tgaaagagctttttcagcaatgaagattatcaagact |
26540839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 21974008 - 21973972
Alignment:
| Q |
262 |
tgaaagagctttctcagctatgaagattatcaagact |
298 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
21974008 |
tgaaagagctttttcagcaatgaagattatcaagact |
21973972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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