View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4432_low_9 (Length: 251)
Name: NF4432_low_9
Description: NF4432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4432_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 25740284 - 25740046
Alignment:
| Q |
1 |
atctacccttcagctttagttgcctaggttcgatactcttatacaccggnnnnnnncatcgtgacaaatgtattattcgaagatatcagtcataaaacag |
100 |
Q |
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| T |
25740284 |
atctacccttcagctttagtggcctaggttcgatactcttatacaccggaaaaaaacatcgtgacaaatgtattattcgaagatataagtcataaaacag |
25740185 |
T |
|
| Q |
101 |
tggcaattcaacacgnnnnnnnnnacagtgataaattaacctttttgttgggacaaagacaaagacaaagacagtgacaagaattcaagactaaccactn |
200 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25740184 |
tggcaattcaacacggtttttt--acagtgataaattaacctttttgttgggacaaagacaaagacaaagacagtgacaagaattcaagactaaccacta |
25740087 |
T |
|
| Q |
201 |
nnnnnncaacatgataacaaccgacttcgtcatgagaataa |
241 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
25740086 |
aaaaaacaacatgataacaaccgacttcgtcatgagaataa |
25740046 |
T |
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