View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4434-Insertion-1 (Length: 893)
Name: NF4434-Insertion-1
Description: NF4434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4434-Insertion-1 |
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Alignment Details
Target: chr7 (Bit Score: 856; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 856; E-Value: 0
Query Start/End: Original strand, 7 - 886
Target Start/End: Complemental strand, 36942547 - 36941669
Alignment:
| Q |
7 |
agaaggagaatcaacaaaatcatgtaatacaaacactattatgagccgtttcgagtcaccagcttctgctttttatgcaacagaaaactgcatgggattt |
106 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36942547 |
agaaggagaatcaacaaaatcatgtaatacaaacactattatgagccgtttcgagtcaccagcttctgctttttatgcaacagaaaactgcatgggattt |
36942448 |
T |
|
| Q |
107 |
gcagagtttgatcaccaagttgataataatcaatctttgagttctcaatcatataaggttaatgatttggaattccctttgtgtcaatctcttagggaaa |
206 |
Q |
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| T |
36942447 |
gcagaatttgatcaccaagttgataataatcaatctttgagttctcaatcatataaggttaatgatttggaattccctttgtgtcaatctcttagggaaa |
36942348 |
T |
|
| Q |
207 |
acaatcatttattggatgcatcaaaccaacatgaccccaactttgaactgtctaacactttgcaagcattggtgaaatctcaattgaatggtaatcaaca |
306 |
Q |
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| T |
36942347 |
acaatcatttattggatgcatcaaaccaacatgaccccaactttgaactgtctaacactttgcaagcattggtgaaatctcaattgaatggtaatcaaca |
36942248 |
T |
|
| Q |
307 |
ccttagattcccagaaaacttgaataaattttcatgtgggaattttccatttgaacagcaaaagttgttctttgatggtcttgcctcagttagcaacagc |
406 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36942247 |
ccttagattcccagaaaacttgaataaattttcatgtgggaattttccatttgaacagcaaaagttgttctttgatggtcttgcctcagttagcaacagc |
36942148 |
T |
|
| Q |
407 |
tcatcattttgtaataaaggaaatcatgactatatggtaagtggttttgcaaaatgaatcttctgcggcctcttctacctctccagcagagctcggtcgt |
506 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
36942147 |
tcatcattttgtaataaaggaaatcatgactatatggtaagtggttttgcaaaatgaatcttctgcggcctcttctacctctccagcagagcttggtcgt |
36942048 |
T |
|
| Q |
507 |
tgaattaatccaacgatcaagatactgctggaggtgatggagagaccgaagaggatttgtgtcataacatatttatactagtattgagaacccttgcgtc |
606 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36942047 |
tgaattaatccaacgatcaagatactgctggaggtgatggagagaccgaagaggatttgtgtcataacatatttatactagtattgagaacccttgcgtc |
36941948 |
T |
|
| Q |
607 |
tcacagggaagaaatcgttgaaagaatatatagtagttacgctttatacttttttgtattcaattattgagcatcaataacatgtaacataaatcattgt |
706 |
Q |
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| T |
36941947 |
tcacagggaagaaatcgttgcaagaatatatagtagttacgctttatacttttttgtattcaattattgagcatcaataacatgtaacataaatcattgt |
36941848 |
T |
|
| Q |
707 |
atcacattaggcatacatcaatgaatcacatgtctaattatagcatccgtttgcaggttgctcgtggatcttatcatttatcagtcgagcaactgaattt |
806 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36941847 |
atcacattaggcatacatcaatgaatcacatgtctaattatagcatccgtttgcaggttgctcgtggatcttatcatttatcagtcgagcaactgaattt |
36941748 |
T |
|
| Q |
807 |
ctcttctcagcatgagaagttgtctccaacaatttcagcaggaagtttatcaacttctcttggtagcactgtcttctagt |
886 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |
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| T |
36941747 |
ctcttctcagcatgagaagttgtctccaacaatttcagcaggaagtttatcaacttctcttggaagcact-tcttctagt |
36941669 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 128
Target Start/End: Complemental strand, 22815056 - 22814972
Alignment:
| Q |
44 |
attatgagccgtttcgagtcaccagcttctgctttttatgcaacagaaaactgcatgggatttgcagagtttgatcaccaagttg |
128 |
Q |
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|||||||| |||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| || | | |||| ||||||||| |
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| T |
22815056 |
attatgagaagttttgagtcaccaacttcagctttttatgcaacagaaatttgcatgggttttccacaatatgattaccaagttg |
22814972 |
T |
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