View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4435-Insertion-1 (Length: 915)

Name: NF4435-Insertion-1
Description: NF4435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4435-Insertion-1
NF4435-Insertion-1
[»] chr6 (57 HSPs)
chr6 (8-306)||(19647802-19648092)
chr6 (371-561)||(19648157-19648347)
chr6 (557-697)||(4868752-4868893)
chr6 (540-871)||(2736164-2736499)
chr6 (552-697)||(9705019-9705165)
chr6 (544-652)||(6542927-6543036)
chr6 (552-737)||(10145649-10145835)
chr6 (541-697)||(8026377-8026533)
chr6 (547-652)||(13353195-13353301)
chr6 (547-652)||(33796320-33796426)
chr6 (544-648)||(24554108-24554213)
chr6 (547-638)||(19639111-19639203)
chr6 (563-642)||(27772724-27772804)
chr6 (557-651)||(30256582-30256677)
chr6 (546-635)||(8566960-8567049)
chr6 (547-652)||(12330163-12330269)
chr6 (563-652)||(33494549-33494639)
chr6 (547-637)||(4868576-4868667)
chr6 (544-638)||(6542707-6542801)
chr6 (563-649)||(30256823-30256909)
chr6 (552-656)||(3823303-3823405)
chr6 (563-652)||(21690732-21690822)
chr6 (557-637)||(9705258-9705339)
chr6 (563-652)||(19712724-19712816)
chr6 (557-655)||(15082125-15082223)
chr6 (544-637)||(6054394-6054488)
chr6 (552-637)||(17147659-17147745)
chr6 (815-912)||(19648521-19648618)
chr6 (563-652)||(27653227-27653317)
chr6 (563-639)||(11721915-11721992)
chr6 (577-669)||(12885081-12885174)
chr6 (810-869)||(6054428-6054488)
chr6 (542-617)||(6400640-6400715)
chr6 (568-637)||(6623409-6623479)
chr6 (563-652)||(11085591-11085681)
chr6 (547-652)||(13740675-13740781)
chr6 (547-652)||(13746175-13746281)
chr6 (563-617)||(28867977-28868031)
chr6 (552-649)||(33631792-33631889)
chr6 (575-638)||(5648670-5648734)
chr6 (542-606)||(6400877-6400941)
chr6 (563-654)||(8001532-8001624)
chr6 (577-635)||(8026628-8026687)
chr6 (563-639)||(12199801-12199879)
chr6 (562-617)||(20830759-20830814)
chr6 (563-637)||(25065093-25065168)
chr6 (563-652)||(5572600-5572689)
chr6 (563-652)||(6054179-6054269)
chr6 (173-215)||(19661068-19661110)
chr6 (563-617)||(27656468-27656522)
chr6 (558-604)||(30711249-30711295)
chr6 (552-617)||(2753257-2753322)
chr6 (552-652)||(3680011-3680112)
chr6 (540-593)||(3680233-3680286)
chr6 (567-604)||(10314045-10314082)
chr6 (547-635)||(12330292-12330380)
chr6 (540-617)||(16722827-16722904)
[»] chr5 (65 HSPs)
chr5 (547-697)||(41666932-41667083)
chr5 (547-697)||(24270045-24270195)
chr5 (547-697)||(24346676-24346827)
chr5 (547-652)||(24528534-24528640)
chr5 (552-652)||(24531598-24531699)
chr5 (546-652)||(15480315-15480422)
chr5 (544-652)||(9368586-9368695)
chr5 (561-652)||(29909705-29909797)
chr5 (540-689)||(26137292-26137443)
chr5 (552-638)||(38976932-38977019)
chr5 (547-652)||(2063718-2063823)
chr5 (563-617)||(7607604-7607658)
chr5 (563-652)||(8098328-8098417)
chr5 (563-652)||(21209905-21209995)
chr5 (552-637)||(32908717-32908803)
chr5 (557-640)||(24647700-24647784)
chr5 (546-649)||(37782037-37782141)
chr5 (544-654)||(1564549-1564660)
chr5 (578-652)||(18333683-18333758)
chr5 (547-637)||(41666756-41666847)
chr5 (547-651)||(8081098-8081204)
chr5 (563-652)||(13296683-13296772)
chr5 (563-652)||(24487629-24487719)
chr5 (547-697)||(6637596-6637747)
chr5 (546-637)||(33337237-33337329)
chr5 (596-742)||(17423764-17423911)
chr5 (563-649)||(25258288-25258375)
chr5 (563-649)||(25322078-25322165)
chr5 (551-668)||(15438985-15439103)
chr5 (552-637)||(19705902-19705988)
chr5 (552-617)||(95286-95351)
chr5 (540-617)||(15438864-15438941)
chr5 (544-617)||(18333485-18333558)
chr5 (533-637)||(28510071-28510176)
chr5 (552-617)||(42295578-42295643)
chr5 (563-638)||(13296902-13296978)
chr5 (557-652)||(17352652-17352748)
chr5 (545-637)||(18885453-18885548)
chr5 (546-637)||(20510641-20510733)
chr5 (577-640)||(33337451-33337515)
chr5 (568-638)||(25258092-25258163)
chr5 (568-638)||(25321882-25321953)
chr5 (533-639)||(15480537-15480646)
chr5 (563-652)||(19522097-19522187)
chr5 (557-638)||(21306891-21306973)
chr5 (557-638)||(21314729-21314811)
chr5 (563-617)||(29909507-29909561)
chr5 (583-617)||(33177957-33177991)
chr5 (540-617)||(6413446-6413523)
chr5 (540-652)||(6413641-6413753)
chr5 (540-652)||(6919413-6919524)
chr5 (552-605)||(17352467-17352520)
chr5 (563-635)||(26137110-26137183)
chr5 (563-635)||(27132994-27133067)
chr5 (540-652)||(38731822-38731935)
chr5 (548-635)||(19522316-19522403)
chr5 (547-638)||(24346499-24346591)
chr5 (558-617)||(60092-60151)
chr5 (622-661)||(1564484-1564523)
chr5 (810-849)||(15590199-15590238)
chr5 (622-652)||(95485-95515)
chr5 (563-617)||(7369734-7369788)
chr5 (575-652)||(20225063-20225141)
chr5 (563-612)||(8098561-8098610)
chr5 (596-648)||(13701056-13701109)
[»] chr4 (68 HSPs)
chr4 (533-695)||(35788639-35788802)
chr4 (552-655)||(52559566-52559670)
chr4 (546-652)||(50543551-50543658)
chr4 (563-652)||(6218214-6218304)
chr4 (563-652)||(22231292-22231382)
chr4 (563-651)||(1518174-1518263)
chr4 (552-652)||(40717425-40717526)
chr4 (577-652)||(14783171-14783247)
chr4 (547-637)||(22231072-22231163)
chr4 (563-648)||(12869251-12869337)
chr4 (563-652)||(35796961-35797051)
chr4 (563-652)||(53814913-53815003)
chr4 (546-650)||(11036732-11036837)
chr4 (533-637)||(22845446-22845551)
chr4 (563-650)||(35609697-35609785)
chr4 (546-649)||(50543317-50543421)
chr4 (520-649)||(400552-400683)
chr4 (563-649)||(21498364-21498451)
chr4 (525-637)||(6218410-6218524)
chr4 (563-652)||(9685408-9685498)
chr4 (545-637)||(22863466-22863559)
chr4 (557-645)||(37836084-37836173)
chr4 (563-651)||(53828508-53828597)
chr4 (546-617)||(9279220-9279291)
chr4 (525-638)||(18528215-18528330)
chr4 (563-649)||(25052862-25052949)
chr4 (546-617)||(28245546-28245617)
chr4 (547-637)||(35788888-35788979)
chr4 (563-617)||(12869049-12869103)
chr4 (563-648)||(17111574-17111659)
chr4 (577-654)||(18528439-18528517)
chr4 (544-637)||(22827529-22827623)
chr4 (572-697)||(40716560-40716686)
chr4 (572-652)||(4645661-4645742)
chr4 (563-635)||(21498805-21498878)
chr4 (552-652)||(34358014-34358115)
chr4 (557-637)||(35796741-35796822)
chr4 (558-649)||(8902632-8902724)
chr4 (557-640)||(11036507-11036591)
chr4 (577-639)||(5398473-5398536)
chr4 (563-645)||(5846156-5846239)
chr4 (558-652)||(21041356-21041451)
chr4 (547-637)||(39902562-39902653)
chr4 (563-613)||(27464272-27464322)
chr4 (544-637)||(44118858-44118952)
chr4 (563-616)||(2261774-2261827)
chr4 (588-696)||(4464330-4464439)
chr4 (568-652)||(6666619-6666704)
chr4 (563-635)||(9685642-9685715)
chr4 (563-635)||(53814675-53814748)
chr4 (545-652)||(7926320-7926428)
chr4 (810-869)||(18528216-18528276)
chr4 (563-654)||(22822360-22822452)
chr4 (565-680)||(24513316-24513431)
chr4 (557-612)||(28246110-28246165)
chr4 (586-637)||(31039346-31039397)
chr4 (546-605)||(31254439-31254498)
chr4 (563-617)||(6666220-6666274)
chr4 (525-637)||(20095263-20095377)
chr4 (583-652)||(21750261-21750331)
chr4 (563-617)||(42684813-42684867)
chr4 (563-617)||(53828309-53828363)
chr4 (563-635)||(20821983-20822056)
chr4 (596-652)||(22445495-22445552)
chr4 (547-604)||(27634114-27634171)
chr4 (557-637)||(28073180-28073261)
chr4 (578-654)||(30305299-30305376)
chr4 (545-637)||(41187931-41188024)
[»] chr1 (59 HSPs)
chr1 (533-656)||(39348333-39348456)
chr1 (558-655)||(26346950-26347047)
chr1 (547-652)||(17452812-17452918)
chr1 (547-652)||(4112990-4113096)
chr1 (577-697)||(33156757-33156878)
chr1 (565-652)||(27413359-27413447)
chr1 (563-649)||(51589236-51589323)
chr1 (563-648)||(3169776-3169862)
chr1 (546-638)||(25713386-25713479)
chr1 (533-648)||(35892271-35892387)
chr1 (533-635)||(17452680-17452783)
chr1 (577-651)||(35772053-35772128)
chr1 (531-637)||(40079130-40079237)
chr1 (547-652)||(26176902-26177008)
chr1 (563-652)||(51589816-51589906)
chr1 (552-652)||(25145704-25145805)
chr1 (533-652)||(26173440-26173560)
chr1 (557-652)||(38668129-38668225)
chr1 (558-649)||(40316037-40316129)
chr1 (544-638)||(35772255-35772350)
chr1 (563-652)||(51589002-51589092)
chr1 (552-648)||(8870898-8870995)
chr1 (540-652)||(30369822-30369935)
chr1 (540-648)||(38733139-38733247)
chr1 (553-648)||(4098391-4098486)
chr1 (583-654)||(11525027-11525099)
chr1 (547-638)||(43409801-43409892)
chr1 (546-652)||(2859611-2859718)
chr1 (531-637)||(15986332-15986439)
chr1 (563-637)||(26177153-26177228)
chr1 (583-649)||(29265983-29266050)
chr1 (563-637)||(41035826-41035901)
chr1 (563-617)||(12244982-12245036)
chr1 (583-652)||(25255341-25255410)
chr1 (552-606)||(26173255-26173309)
chr1 (558-616)||(49316166-49316224)
chr1 (546-638)||(25145483-25145576)
chr1 (540-617)||(39808453-39808529)
chr1 (544-617)||(52650791-52650864)
chr1 (546-637)||(27413575-27413667)
chr1 (637-672)||(9632072-9632107)
chr1 (563-669)||(11234226-11234333)
chr1 (563-637)||(22377542-22377617)
chr1 (577-639)||(31432227-31432290)
chr1 (558-648)||(32783269-32783360)
chr1 (563-648)||(9499256-9499341)
chr1 (552-637)||(26865357-26865443)
chr1 (552-637)||(39348118-39348204)
chr1 (544-637)||(42586438-42586531)
chr1 (557-637)||(4112539-4112620)
chr1 (598-654)||(11524827-11524884)
chr1 (557-606)||(16163171-16163220)
chr1 (563-612)||(28408067-28408116)
chr1 (544-617)||(31181533-31181606)
chr1 (544-617)||(38080596-38080668)
chr1 (540-617)||(38668347-38668424)
chr1 (558-615)||(42351882-42351939)
chr1 (544-601)||(42819291-42819348)
chr1 (563-635)||(52127731-52127803)
[»] scaffold0129 (1 HSPs)
scaffold0129 (546-652)||(14296-14403)
[»] chr2 (62 HSPs)
chr2 (552-720)||(2029768-2029936)
chr2 (557-733)||(38629845-38630022)
chr2 (563-651)||(28407778-28407867)
chr2 (547-697)||(5711614-5711765)
chr2 (546-651)||(40379429-40379535)
chr2 (584-680)||(21383626-21383723)
chr2 (563-652)||(29718338-29718428)
chr2 (535-637)||(25082536-25082639)
chr2 (563-652)||(2324250-2324340)
chr2 (547-652)||(14466394-14466500)
chr2 (552-649)||(37840336-37840434)
chr2 (568-648)||(10570985-10571066)
chr2 (552-639)||(2030003-2030091)
chr2 (552-733)||(10523018-10523198)
chr2 (547-637)||(16419496-16419587)
chr2 (552-638)||(19544369-19544455)
chr2 (583-652)||(16419297-16419367)
chr2 (563-617)||(40718227-40718281)
chr2 (533-649)||(15464749-15464866)
chr2 (563-635)||(19191611-19191684)
chr2 (546-645)||(17719393-17719493)
chr2 (577-652)||(24395887-24395963)
chr2 (557-648)||(36352147-36352239)
chr2 (546-637)||(40379208-40379300)
chr2 (547-637)||(5711438-5711529)
chr2 (552-637)||(5851680-5851767)
chr2 (563-697)||(15124723-15124857)
chr2 (563-637)||(17719576-17719651)
chr2 (563-652)||(5509089-5509179)
chr2 (563-616)||(8424898-8424951)
chr2 (563-635)||(40149004-40149077)
chr2 (540-617)||(42639634-42639711)
chr2 (557-652)||(32356390-32356485)
chr2 (544-635)||(33606056-33606147)
chr2 (563-617)||(2324484-2324538)
chr2 (810-867)||(13486359-13486417)
chr2 (563-648)||(17854917-17855003)
chr2 (563-617)||(32884117-32884171)
chr2 (552-680)||(14927101-14927230)
chr2 (557-645)||(33606280-33606369)
chr2 (597-652)||(93338-93394)
chr2 (546-637)||(11020551-11020643)
chr2 (542-606)||(17525369-17525433)
chr2 (629-697)||(19110319-19110387)
chr2 (558-637)||(30063266-30063346)
chr2 (597-647)||(93616-93667)
chr2 (577-635)||(13486358-13486417)
chr2 (558-617)||(15460979-15461038)
chr2 (546-617)||(16533540-16533611)
chr2 (533-604)||(18607042-18607113)
chr2 (583-645)||(27897597-27897660)
chr2 (553-635)||(31222521-31222604)
chr2 (545-638)||(9927903-9927997)
chr2 (542-616)||(32356605-32356678)
chr2 (563-617)||(37769963-37770017)
chr2 (706-756)||(42895630-42895680)
chr2 (553-602)||(3738933-3738982)
chr2 (563-631)||(5509323-5509392)
chr2 (565-602)||(15451601-15451638)
chr2 (563-635)||(17854693-17854766)
chr2 (598-654)||(33381173-33381230)
chr2 (574-639)||(34515683-34515748)
[»] chr8 (67 HSPs)
chr8 (544-650)||(24532407-24532514)
chr8 (552-652)||(8084126-8084227)
chr8 (552-652)||(41790658-41790758)
chr8 (546-652)||(39052913-39053020)
chr8 (563-652)||(4828078-4828168)
chr8 (547-652)||(11232178-11232284)
chr8 (547-652)||(11232413-11232519)
chr8 (563-652)||(17469828-17469918)
chr8 (563-652)||(37001236-37001326)
chr8 (540-652)||(20301248-20301361)
chr8 (540-652)||(21087880-21087993)
chr8 (540-696)||(28213044-28213200)
chr8 (540-635)||(28069358-28069454)
chr8 (563-652)||(19256804-19256894)
chr8 (557-652)||(15042870-15042966)
chr8 (552-649)||(10884063-10884161)
chr8 (547-637)||(15042669-15042760)
chr8 (558-655)||(42049668-42049766)
chr8 (552-652)||(12688071-12688172)
chr8 (552-652)||(16050028-16050129)
chr8 (544-617)||(38447447-38447520)
chr8 (557-652)||(5932168-5932264)
chr8 (563-638)||(37001474-37001550)
chr8 (577-652)||(37868567-37868643)
chr8 (547-637)||(35682780-35682871)
chr8 (547-648)||(12317040-12317142)
chr8 (563-648)||(16962234-16962320)
chr8 (563-652)||(34842688-34842778)
chr8 (540-617)||(8929004-8929081)
chr8 (563-635)||(17477075-17477148)
chr8 (563-635)||(19256587-19256660)
chr8 (563-635)||(24075307-24075380)
chr8 (544-635)||(422218-422310)
chr8 (544-647)||(5590357-5590461)
chr8 (544-651)||(8716105-8716213)
chr8 (545-617)||(29099760-29099832)
chr8 (563-637)||(42846604-42846680)
chr8 (546-617)||(5675754-5675825)
chr8 (533-604)||(7729921-7729992)
chr8 (544-637)||(39960182-39960277)
chr8 (563-617)||(4828303-4828357)
chr8 (547-617)||(5931969-5932039)
chr8 (563-617)||(7267485-7267539)
chr8 (564-637)||(27204975-27205049)
chr8 (564-637)||(27205073-27205147)
chr8 (564-637)||(27205171-27205245)
chr8 (547-652)||(36917423-36917529)
chr8 (563-651)||(422438-422527)
chr8 (557-652)||(3157543-3157640)
chr8 (557-637)||(8084366-8084447)
chr8 (563-643)||(38475757-38475838)
chr8 (552-651)||(26800497-26800597)
chr8 (589-656)||(38476074-38476142)
chr8 (557-735)||(6462963-6463141)
chr8 (563-645)||(8466715-8466798)
chr8 (563-637)||(12547109-12547183)
chr8 (552-638)||(12688306-12688393)
chr8 (563-637)||(22638178-22638253)
chr8 (563-689)||(26208196-26208323)
chr8 (785-867)||(28069358-28069441)
chr8 (563-617)||(34843127-34843181)
chr8 (563-648)||(20094783-20094868)
chr8 (557-637)||(25325650-25325731)
chr8 (563-608)||(30201553-30201598)
chr8 (583-652)||(31197645-31197714)
chr8 (563-635)||(39743539-39743612)
chr8 (563-616)||(39984824-39984877)
[»] chr7 (64 HSPs)
chr7 (555-652)||(33996295-33996393)
chr7 (552-652)||(25620135-25620236)
chr7 (547-695)||(26239857-26240006)
chr7 (546-650)||(31485645-31485750)
chr7 (533-652)||(21821786-21821906)
chr7 (547-652)||(29469599-29469705)
chr7 (547-652)||(36277210-36277316)
chr7 (555-668)||(20305631-20305745)
chr7 (557-652)||(31892155-31892252)
chr7 (563-652)||(34027403-34027493)
chr7 (577-652)||(11743052-11743128)
chr7 (547-652)||(1596588-1596693)
chr7 (547-652)||(21861288-21861394)
chr7 (547-635)||(29469834-29469923)
chr7 (557-637)||(31892391-31892472)
chr7 (540-648)||(48243425-48243534)
chr7 (557-652)||(3038068-3038164)
chr7 (572-651)||(40121909-40121989)
chr7 (546-637)||(48243060-48243152)
chr7 (585-680)||(48417471-48417567)
chr7 (533-652)||(48661539-48661659)
chr7 (540-631)||(31485430-31485521)
chr7 (572-649)||(6782880-6782958)
chr7 (563-652)||(17202189-17202279)
chr7 (563-648)||(26562061-26562147)
chr7 (546-697)||(3519979-3520131)
chr7 (546-638)||(21054951-21055044)
chr7 (563-635)||(31257032-31257105)
chr7 (540-617)||(32278905-32278982)
chr7 (563-646)||(2544437-2544521)
chr7 (540-604)||(4454763-4454827)
chr7 (578-649)||(10903110-10903182)
chr7 (518-652)||(28080629-28080764)
chr7 (553-631)||(8075859-8075938)
chr7 (557-643)||(23796177-23796264)
chr7 (563-649)||(31257254-31257341)
chr7 (552-638)||(36276989-36277076)
chr7 (578-648)||(21213030-21213100)
chr7 (572-652)||(33834209-33834291)
chr7 (599-652)||(36993292-36993346)
chr7 (557-638)||(47710447-47710529)
chr7 (557-638)||(47722103-47722185)
chr7 (544-652)||(2404392-2404501)
chr7 (563-635)||(36206064-36206137)
chr7 (558-615)||(40898737-40898794)
chr7 (557-617)||(1596832-1596892)
chr7 (598-653)||(5871795-5871851)
chr7 (616-652)||(6001654-6001690)
chr7 (601-652)||(10882223-10882275)
chr7 (547-638)||(37923247-37923339)
chr7 (518-617)||(42985143-42985243)
chr7 (546-617)||(3392975-3393046)
chr7 (577-651)||(4506956-4507031)
chr7 (544-615)||(11211701-11211771)
chr7 (558-617)||(15317557-15317616)
chr7 (547-637)||(21861523-21861614)
chr7 (563-637)||(34027637-34027712)
chr7 (577-646)||(4886353-4886423)
chr7 (563-652)||(23796007-23796096)
chr7 (544-617)||(32879634-32879708)
chr7 (563-631)||(2544220-2544289)
chr7 (557-637)||(40746032-40746113)
chr7 (558-654)||(40898904-40899001)
chr7 (808-849)||(44874366-44874407)
[»] chr3 (59 HSPs)
chr3 (547-696)||(16239585-16239735)
chr3 (545-652)||(54368508-54368616)
chr3 (563-652)||(1723060-1723150)
chr3 (552-757)||(12930008-12930213)
chr3 (547-652)||(54567886-54567992)
chr3 (544-654)||(45138953-45139064)
chr3 (563-652)||(11589795-11589885)
chr3 (583-680)||(39620122-39620220)
chr3 (563-648)||(4155334-4155420)
chr3 (563-652)||(45828029-45828119)
chr3 (540-639)||(20303061-20303161)
chr3 (546-652)||(35038412-35038519)
chr3 (547-648)||(16926937-16927039)
chr3 (563-652)||(20327833-20327923)
chr3 (547-648)||(39269325-39269427)
chr3 (552-652)||(9272960-9273061)
chr3 (544-647)||(22729091-22729195)
chr3 (546-637)||(35038193-35038285)
chr3 (590-652)||(8142631-8142694)
chr3 (544-614)||(1800206-1800276)
chr3 (564-637)||(7697397-7697471)
chr3 (587-652)||(20303369-20303435)
chr3 (547-617)||(20327634-20327704)
chr3 (633-715)||(31150924-31151006)
chr3 (552-648)||(17001409-17001506)
chr3 (563-651)||(17638245-17638333)
chr3 (557-641)||(31317233-31317317)
chr3 (557-637)||(31317470-31317551)
chr3 (544-617)||(38791470-38791543)
chr3 (552-617)||(49629604-49629669)
chr3 (552-638)||(3975356-3975443)
chr3 (622-737)||(11659581-11659696)
chr3 (558-652)||(13574905-13575000)
chr3 (572-638)||(24866216-24866283)
chr3 (578-652)||(28087199-28087274)
chr3 (584-742)||(33640076-33640235)
chr3 (544-637)||(472059-472153)
chr3 (552-637)||(4155558-4155644)
chr3 (568-610)||(24502099-24502141)
chr3 (531-648)||(46794032-46794149)
chr3 (563-651)||(23708209-23708298)
chr3 (563-651)||(23726665-23726754)
chr3 (563-651)||(23745121-23745210)
chr3 (563-651)||(24063646-24063735)
chr3 (552-652)||(29575874-29575975)
chr3 (558-637)||(50930707-50930783)
chr3 (563-638)||(8018978-8019054)
chr3 (544-612)||(45138827-45138895)
chr3 (578-617)||(1353473-1353512)
chr3 (558-613)||(15019302-15019357)
chr3 (583-637)||(37246666-37246721)
chr3 (563-637)||(43781593-43781668)
chr3 (563-617)||(272434-272488)
chr3 (544-617)||(13741121-13741195)
chr3 (583-656)||(15019496-15019570)
chr3 (563-652)||(27670377-27670466)
chr3 (630-687)||(22775584-22775641)
chr3 (563-651)||(23691409-23691498)
chr3 (572-617)||(32215535-32215580)
[»] scaffold0519 (2 HSPs)
scaffold0519 (547-652)||(1910-2016)
scaffold0519 (547-637)||(2145-2236)
[»] scaffold0692 (1 HSPs)
scaffold0692 (552-652)||(5738-5839)
[»] scaffold0481 (1 HSPs)
scaffold0481 (563-651)||(3456-3545)
[»] scaffold0005 (2 HSPs)
scaffold0005 (577-652)||(56483-56559)
scaffold0005 (544-637)||(288656-288750)
[»] scaffold0092 (1 HSPs)
scaffold0092 (515-652)||(5616-5755)
[»] scaffold0048 (1 HSPs)
scaffold0048 (563-652)||(81852-81942)
[»] scaffold0181 (1 HSPs)
scaffold0181 (544-637)||(20930-21024)
[»] scaffold0766 (1 HSPs)
scaffold0766 (533-633)||(6254-6355)
[»] scaffold0334 (1 HSPs)
scaffold0334 (563-617)||(4449-4503)
[»] scaffold0041 (2 HSPs)
scaffold0041 (558-615)||(67490-67547)
scaffold0041 (558-654)||(67283-67380)
[»] scaffold0400 (1 HSPs)
scaffold0400 (577-652)||(3869-3945)
[»] scaffold0365 (1 HSPs)
scaffold0365 (577-652)||(4513-4589)
[»] scaffold0050 (1 HSPs)
scaffold0050 (563-613)||(69557-69607)


Alignment Details
Target: chr6 (Bit Score: 215; Significance: 1e-117; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 8 - 306
Target Start/End: Original strand, 19647802 - 19648092
Alignment:
Q  8 cttggcactctttctttgtgtacttatgtcctaaaaagaagattctataattgcaatatgtaatgtatctatcttgaagtgggtctcacgttgtttttgc 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19647802 cttggtactctttctttgtgtacttatgtcctaaaaagaagattctataattgcaatatgtaatgtatctatcttgaagtgggtctcacgttggttttgc 19647901  T
Q  108 tgtacagcttagattgcaatatttcaagggtaatgcttatcattggtcttacttctatctatctatttccacacgtcaacctttctacttcttatcctca 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||  ||| |||||||||||||||    
T  19647902 tgtacagcttagattgcaatatttcaagggtaatgcttatcattggtcttact----tctatctatttccacacgtcaatgtttatacttcttatcctca 19647997  T
Q  208 aaatgatcgatcattccctatagcaatctttgcttgtattaacataagtttggtatcaaattttagaggttaaaagtgattatattctatatatcctag 306  Q
    | |  || ||||||||| | |||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  19647998 aca--at-gatcattccttttagcaatctttgcttgtattaagataagtttggtttc-aattttagaggttaaaagtgattatattctatatatcctag 19648092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 371 - 561
Target Start/End: Original strand, 19648157 - 19648347
Alignment:
Q  371 caattcaagattggaattttagtttaaaattt--attaatacataaatgcattcaaactgaaaccactttgtacttttgcatgttaaactgaactaatta 468  Q
    ||||||||| |||||||||||||| ||| |||  ||||||||||||||||||||||||  |||  ||||| || |   || ||| |||||||||||||||    
T  19648157 caattcaaggttggaattttagttcaaattttttattaatacataaatgcattcaaacataaatgactttttagt---gcttgtcaaactgaactaatta 19648253  T
Q  469 actgcgcatttaaattctaatacttatttatatttttattaggtttaattattgtgaagagt-ctacatcatatatgagatggactgataatgt 561  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||||||||||| || ||| | |||||  ||||||||||| |||| |||||    
T  19648254 actgtgcatttaaattctaatatttatttataattttattaggtttaattattgttaaaagtcccacatcggatatgagatggtctgacaatgt 19648347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 557 - 697
Target Start/End: Complemental strand, 4868893 - 4868752
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctcctc 655  Q
    ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| |||||||||| || | |||||||||||||||||||||||||||||||||    
T  4868893 aatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctc 4868794  T
Q  656 cttgatctgttgggtcatctgctattgggttttcgttatcgg 697  Q
    |  |||| | |||| || |||||||  ||||| |||||||||    
T  4868793 caagatccgctgggccacctgctatcaggtttccgttatcgg 4868752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 540 - 871
Target Start/End: Complemental strand, 2736499 - 2736164
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcct-accacgatttctaagat 638  Q
    ||||||||||  |||||||||| ||||||||||| | ||||  |||| ||||||  ||||||||| |  ||||||||  ||| |||||||||||||| ||    
T  2736499 atatgagatgacctgataatgtgtttataagtgggggcaattctcacatcacaagtcggttttgttggattgtgttaagcctaaccacgatttctaaaat 2736400  T
Q  639 ggtatcagagcctcctccttgatctgttgggtcatctgctattgggttttcgttatcggatcgctctccatttatatccacgctccagatgtccagtcca 738  Q
    | |||||||||||  | |  ||||| ||||| || |||||||| ||||| |||||||||| | | |  ||||||| |||||||||||||||| ||||||     
T  2736399 gatatcagagcctgattcaagatctattgggccacctgctattaggtttccgttatcggaccacccatcatttatgtccacgctccagatgttcagtcct 2736300  T
Q  739 aggcaagagaggttgtgttgagagtctcacatcag--aggagaatgcttgacaatgtatttataactaacagaaatcctcacctcacagactgattttgt 836  Q
      ||  ||| || ||||||||||||| |||||| |  ||||||   | ||||||||| ||||||| |      ||||||||||||| | || ||||||||    
T  2736299 gtgcgtgagggggtgtgttgagagtcccacatcgggtaggagatgacctgacaatgtgtttataagtggggacaatcctcacctcataaacagattttgt 2736200  T
Q  837 agggttgtgttaga-cgtaccacgatttctaagaat 871  Q
    ||| |||||||||| |  ||||||||||||||||||    
T  2736199 aggattgtgttagacccaaccacgatttctaagaat 2736164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 552 - 697
Target Start/End: Original strand, 9705019 - 9705165
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcc 650  Q
    |||| ||||| ||||||||||| | |||||||||||||||||  ||||||||||| ||||||||| | || ||||| |||||||||||||||||||||||    
T  9705019 ctgacaatgtgtttataagtgggggcaatcatcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcc 9705118  T
Q  651 tcctccttgatctgttgggtcatctgctattgggttttcgttatcgg 697  Q
    ||||||  ||| ||||||| || |||||||  ||||| | |||||||    
T  9705119 tcctccaagatttgttgggccacctgctatcaggtttccattatcgg 9705165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 544 - 652
Target Start/End: Complemental strand, 6543036 - 6542927
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggta 642  Q
    ||||||| |||| ||||| ||||||||||| | |||||||||||||| || |||||||||||| ||||||||||  || ||||||||||| |||||||||    
T  6543036 gagatggtctgacaatgtgtttataagtgggggcaatcatcacctcagaagccggttttgtggggttgtgttagacccaaccacgatttcaaagatggta 6542937  T
Q  643 tcagagcctc 652  Q
    ||||||||||    
T  6542936 tcagagcctc 6542927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 552 - 737
Target Start/End: Complemental strand, 10145835 - 10145649
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagcc 650  Q
    |||||||||| ||||||| | | ||||||  |||||||||||  | ||||||| | |||||||||| | | ||||| |||||||||||| |||||||| |    
T  10145835 ctgataatgtgtttataaatagggacaattttcacctcacaagtcagttttgtagggttgtgttaggctcaaccacaatttctaagatgatatcagagtc 10145736  T
Q  651 tcctccttgatctgttgggtcatctgctattgggttttcgttatcggatcgctctccatttatatccacgctccagatgtccagtcc 737  Q
    |  | | |||||||||  | ||||||||||  ||||| ||||||| || ||| |||||||||| ||||| |||||||||||||||||    
T  10145735 tggttcatgatctgtttagccatctgctatcaggtttccgttatcagaccgccctccatttatgtccactctccagatgtccagtcc 10145649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 541 - 697
Target Start/End: Original strand, 8026377 - 8026533
Alignment:
Q  541 tatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatg 639  Q
    |||||| ||| |||| ||| | ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || |||||||||||||| |||    
T  8026377 tatgagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatg 8026476  T
Q  640 gtatcagagcctcctccttgatctgttgggtcatctgctattgggttttcgttatcgg 697  Q
    |||||||||||| || |  ||| ||||||| || ||| |||  |||||||||||||||    
T  8026477 gtatcagagcct-cttcacgatttgttgggccacctgttatcaggttttcgttatcgg 8026533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 547 - 652
Target Start/End: Original strand, 13353195 - 13353301
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| | ||||| |||||| |||| |||||||||||| ||||||||| | || ||||| ||||||||||||||||||    
T  13353195 atggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatca 13353294  T
Q  646 gagcctc 652  Q
    |||||||    
T  13353295 gagcctc 13353301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 547 - 652
Target Start/End: Original strand, 33796320 - 33796426
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| | ||||| |||||| |||| |||||||||||| ||||||||| | || ||||| ||||||||||||||||||    
T  33796320 atggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatca 33796419  T
Q  646 gagcctc 652  Q
    |||||||    
T  33796420 gagcctc 33796426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 544 - 648
Target Start/End: Original strand, 24554108 - 24554213
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggta 642  Q
    ||||||| |||| ||| | ||||||||||| | ||||| ||||||||||| ||||||||||||||||||||||||| | ||||  |||||||| ||||||    
T  24554108 gagatggtctgacaatatatttataagtgggggcaatcttcacctcacaagccggttttgtggagttgtgttagtctcaaccataatttctaacatggta 24554207  T
Q  643 tcagag 648  Q
    ||||||    
T  24554208 tcagag 24554213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 547 - 638
Target Start/End: Complemental strand, 19639203 - 19639111
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagat 638  Q
    |||| |||| ||||| ||||||||||| ||||||| ||||||||||||||||||| |||| | ||||||| |||| |||||||||||||||||    
T  19639203 atggcctgacaatgtgtttataagtggggacaatcctcacctcacaaaccggtttagtggggctgtgttaggtccaaccacgatttctaagat 19639111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 563 - 642
Target Start/End: Original strand, 27772724 - 27772804
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggta 642  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  27772724 tttataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggtccaaccacgatttctaatatggta 27772804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 557 - 651
Target Start/End: Original strand, 30256582 - 30256677
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcct 651  Q
    ||||| ||||||| ||| | ||||| ||| |||||||||||||||||||| ||||||||| | || ||||||||||||||| ||||||||||||||    
T  30256582 aatgtgtttataactgggggcaatcctcaactcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaaggtggtatcagagcct 30256677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 546 - 635
Target Start/End: Complemental strand, 8567049 - 8566960
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaa 635  Q
    ||||| |||| ||||| ||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| | || ||||||||||||||    
T  8567049 gatggtctgacaatgtgtttataagtgg-gacaatcctcacctcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaa 8566960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 547 - 652
Target Start/End: Complemental strand, 12330269 - 12330163
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| | ||| | ||||||||||| |||||||||||  ||||||||| | || |||||||||||||| |||||||||    
T  12330269 atggtctgacaatgtgtttataagtgggggcaaccctcacctcacaagccggttttgtgaggttgtgttaggcccaaccacgatttctaatatggtatca 12330170  T
Q  646 gagcctc 652  Q
    |||||||    
T  12330169 gagcctc 12330163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 33494549 - 33494639
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || ||||| |||||||||||||||||||| ||||    
T  33494549 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagaacctc 33494639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 547 - 637
Target Start/End: Complemental strand, 4868667 - 4868576
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||| |||| ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || ||||||||||||||||    
T  4868667 atggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 4868576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 544 - 638
Target Start/End: Complemental strand, 6542801 - 6542707
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtt-agtcctaccacgatttctaagat 638  Q
    ||||||| |||| ||| | ||||||| ||| | |||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||    
T  6542801 gagatggtctgacaatctgtttataaatgggg-caatcatcacctcacaaaccggttttgtagggttgtgttaagtccaaccacgatttctaagat 6542707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 563 - 649
Target Start/End: Original strand, 30256823 - 30256909
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagc 649  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || |||||||||||||| |||||||||||||    
T  30256823 tttataagtgggg-caatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagc 30256909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 552 - 656
Target Start/End: Original strand, 3823303 - 3823405
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcc 650  Q
    |||||||| | ||||||||||| |||||||||||| |||||||| | |||| ||| ||||||||| ||||| ||| ||  ||||||||||||||||||||    
T  3823303 ctgataatttgtttataagtggggacaatcatcacatcacaaactgattttatggggttgtgttaggtcct-ccaaga--tctaagatggtatcagagcc 3823399  T
Q  651 tcctcc 656  Q
    ||||||    
T  3823400 tcctcc 3823405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 21690732 - 21690822
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||| ||||||||||| ||| |||||||| |||||||||| | | |||||||||||||| ||||||||| ||||||    
T  21690732 tttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttaggctcaaccacgatttctaatatggtatcaaagcctc 21690822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 9705258 - 9705339
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaaga 637  Q
    ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||||  || ||||||||||||||||    
T  9705258 aatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttagacccaaccacgatttctaaga 9705339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 19712724 - 19712816
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgt--tagtccta-ccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| |||||||  ||| || | |||| |||||||||||||||||||||||||    
T  19712724 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtgttaggcccaaccaccatttctaagatggtatcagagcctc 19712816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 557 - 655
Target Start/End: Complemental strand, 15082223 - 15082125
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcctac-cacgatttctaagatggtatcagagcctcctc 655  Q
    ||||| |||||||||||| ||| || ||||||||||| ||||||||||||  ||||||||| || |  |||||||||||| ||||||||||| |||||||    
T  15082223 aatgtgtttataagtgga-acagtcctcacctcacaagccggttttgtgggattgtgttaggcccaaacacgatttctaatatggtatcagaacctcctc 15082125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 544 - 637
Target Start/End: Original strand, 6054394 - 6054488
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaaga 637  Q
    ||||||| |||| || || ||||||||||| | ||||| ||||||||||||||| |||||| | ||||||||||  || ||||||||||||||||    
T  6054394 gagatggtctgacaaggtatttataagtgggggcaatcctcacctcacaaaccgattttgtagggttgtgttagacccaaccacgatttctaaga 6054488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 552 - 637
Target Start/End: Complemental strand, 17147745 - 17147659
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||| ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| ||| ||||| |||| ||||| ||||||||||    
T  17147745 ctgacaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttaggtccaaccaccatttctaaga 17147659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 815 - 912
Target Start/End: Original strand, 19648521 - 19648618
Alignment:
Q  815 tcacctcacagactgattttgtagggttgtgttagacgtaccacga-tttctaagaataatagttttactctttctagtttttaattcactcactcact 912  Q
    |||||||||||||   ||| || ||| |||||||||| |||||| | ||||||||||| ||||||||| |||||||| ||||| |||||||||||||||    
T  19648521 tcacctcacagaccagtttagtggggctgtgttagacctaccactaatttctaagaattatagttttattctttcta-tttttcattcactcactcact 19648618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 27653227 - 27653317
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| |  |||| |||||||||||  |||||||||||  ||||||||| || | ||||||||||||| ||||||||||||||||    
T  27653227 tttataagtgggggaaatcctcacctcacaagtcggttttgtgggattgtgttaggcccaaccacgatttctaatatggtatcagagcctc 27653317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 563 - 639
Target Start/End: Original strand, 11721915 - 11721992
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatg 639  Q
    ||||||||||| | ||||| |||||||| || |||||||||||| ||||||||| | || ||||||||||||||||||    
T  11721915 tttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaagatg 11721992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 577 - 669
Target Start/End: Original strand, 12885081 - 12885174
Alignment:
Q  577 caatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctcctccttgatctgttggg 669  Q
    |||||||||||| || | | | |||||||| ||||||||||  ||| ||||||||||||| |||  ||||||||||||||| ||||||||||||    
T  12885081 caatcatcaccttacgagctgattttgtggggttgtgttaggtctaaccacgatttctaatatgacatcagagcctcctccatgatctgttggg 12885174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 810 - 869
Target Start/End: Original strand, 6054428 - 6054488
Alignment:
Q  810 aatcctcacctcacagactgattttgtagggttgtgttaga-cgtaccacgatttctaaga 869  Q
    ||||||||||||||| || |||||||||||||||||||||| |  ||||||||||||||||    
T  6054428 aatcctcacctcacaaaccgattttgtagggttgtgttagacccaaccacgatttctaaga 6054488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 542 - 617
Target Start/End: Complemental strand, 6400715 - 6400640
Alignment:
Q  542 atgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    |||| |||| |||| ||||| ||||||||||||| ||||| |||| ||||||  ||||||||||| ||||||||||    
T  6400715 atgacatggcctgacaatgtgtttataagtggaggcaatcctcacatcacaagtcggttttgtggggttgtgttag 6400640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 568 - 637
Target Start/End: Complemental strand, 6623479 - 6623409
Alignment:
Q  568 aagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||||| | ||||| |||||| |||| |||||||||||| ||||||||| |||| ||||||||||||||||    
T  6623479 aagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggtccaaccacgatttctaaga 6623409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 11085591 - 11085681
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||  |||| |||||| |||||||||||  ||||||||| |||| | |||||||||||||||||| | ||||||||    
T  11085591 tttataagtgggggcaattctcacttcacaagccggttttgtgcggttgtgttaggtccaatcacgatttctaagatggttttagagcctc 11085681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 652
Target Start/End: Original strand, 13740675 - 13740781
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||||||||||| || ||||| ||  ||||||||||  |||||||||| | | |||||||||||||| ||  ||| |    
T  13740675 atggtctgacaatgtgtttataagtggagacaatcctcgcctcataagtcggttttgtgaggttgtgttaggctcaaccacgatttctaatattatatta 13740774  T
Q  646 gagcctc 652  Q
    |||||||    
T  13740775 gagcctc 13740781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 652
Target Start/End: Original strand, 13746175 - 13746281
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||||||||||| || ||||| ||  ||||||||||  |||||||||| | | |||||||||||||| ||  ||| |    
T  13746175 atggtctgacaatgtgtttataagtggagacaatcctcgcctcataagtcggttttgtgaggttgtgttaggctcaaccacgatttctaatattatatta 13746274  T
Q  646 gagcctc 652  Q
    |||||||    
T  13746275 gagcctc 13746281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 617
Target Start/End: Complemental strand, 28868031 - 28867977
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||||    
T  28868031 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 28867977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 649
Target Start/End: Complemental strand, 33631889 - 33631792
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagc 649  Q
    |||| ||||| |||||||||||  |||||| ||||||||  |||||||||||||| |||| |||| |||| |||| ||||| ||||||| |||||||||    
T  33631889 ctgacaatgtgtttataagtgggaacaatcctcacctca-taaccggttttgtggggttgagttaggtccaaccatgatttttaagatgatatcagagc 33631792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 575 - 638
Target Start/End: Complemental strand, 5648734 - 5648670
Alignment:
Q  575 gacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagat 638  Q
    ||||||||||||||||||| |||||||||||  ||||||||| |||| ||||  |||||||||||    
T  5648734 gacaatcatcacctcacaagccggttttgtgaggttgtgttaggtccaaccataatttctaagat 5648670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 6400941 - 6400877
Alignment:
Q  542 atgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtgg 606  Q
    |||| |||| |||| ||| | ||||||||||||| ||||| ||||||||||| ||||||||||||    
T  6400941 atgacatggcctgacaatatgtttataagtggaggcaatcctcacctcacaagccggttttgtgg 6400877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 563 - 654
Target Start/End: Complemental strand, 8001624 - 8001532
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctcct 654  Q
    ||||||||||| | ||||| |||||||| ||  || |||||| | |||||||||| || | |||| ||||||||||||||||||||| |||||    
T  8001624 tttataagtgggggcaatcttcacctcataagtcgattttgttgggttgtgttaggcccaaccacaatttctaagatggtatcagagtctcct 8001532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 577 - 635
Target Start/End: Original strand, 8026628 - 8026687
Alignment:
Q  577 caatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaa 635  Q
    ||||| ||||||||||| |||||||||||| ||||||||| | || ||||||||||||||    
T  8026628 caatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 8026687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 563 - 639
Target Start/End: Complemental strand, 12199879 - 12199801
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcc--taccacgatttctaagatg 639  Q
    ||||||||||| | |||||||||||||||||  | ||||||||  |||||||||| ||   ||||||||||||||||||    
T  12199879 tttataagtgggggcaatcatcacctcacaagtccgttttgtgatgttgtgttaggcccaaaccacgatttctaagatg 12199801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 617
Target Start/End: Original strand, 20830759 - 20830814
Alignment:
Q  562 ttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    |||||||||||| | ||||||||||||||||||| | |||||||  ||||||||||    
T  20830759 ttttataagtgggggcaatcatcacctcacaaactgattttgtgaggttgtgttag 20830814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 563 - 637
Target Start/End: Complemental strand, 25065168 - 25065093
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||||||| | | ||||| ||||||||||| |||||||||||| ||||||||| | || || |||||||||||||    
T  25065168 tttataagtaggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaactacgatttctaaga 25065093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 563 - 652
Target Start/End: Complemental strand, 5572689 - 5572600
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | | ||| ||||||||||| ||||||| |||| ||| |||| | || | ||||||||||||| ||||||||||||||||    
T  5572689 tttataagtgggggccatcctcacctcacaagccggttt-gtggggttttgttcggcccaaccacgatttctaatatggtatcagagcctc 5572600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 6054179 - 6054269
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||  |||||||||||||||| ||  | |||||||||  | ||||||| | | |||||||||||||||||| ||||||| ||||    
T  6054179 tttataagtgaggacaatcatcacctcataagtcagttttgtgggatcgtgttagactcaaccacgatttctaagatgatatcagaacctc 6054269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 19661068 - 19661110
Alignment:
Q  173 tttccacacgtcaacctttctacttcttatcctcaaaatgatc 215  Q
    |||||| |||||| ||||||||||| |||||||||||||||||    
T  19661068 tttccaaacgtcaccctttctactttttatcctcaaaatgatc 19661110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 563 - 617
Target Start/End: Original strand, 27656468 - 27656522
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||| |  |||| ||||||||||| |||||||||||| ||||||||||    
T  27656468 tttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttag 27656522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 558 - 604
Target Start/End: Complemental strand, 30711295 - 30711249
Alignment:
Q  558 atgtttttataagtggagacaatcatcacctcacaaaccggttttgt 604  Q
    |||| ||||||||| ||||||||| ||||||||||||||| ||||||    
T  30711295 atgtgtttataagtagagacaatcctcacctcacaaaccgattttgt 30711249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 617
Target Start/End: Original strand, 2753257 - 2753322
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    |||| ||||| ||||||||||| |  |||| |||||||||||  ||||||||||| ||||||||||    
T  2753257 ctgacaatgtgtttataagtgggggtaatcctcacctcacaaggcggttttgtggggttgtgttag 2753322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 652
Target Start/End: Original strand, 3680011 - 3680112
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcc 650  Q
    |||| ||||| ||||||| ||| | ||||| ||  |||||||  || |||||||| |||||||||| || | |||| |||||||||||||||||||| ||    
T  3680011 ctgacaatgtgtttataactgggggcaatcctcctctcacaagtcgattttgtggggttgtgttaggcccaaccacaatttctaagatggtatcagaccc 3680110  T
Q  651 tc 652  Q
    ||    
T  3680111 tc 3680112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 540 - 593
Target Start/End: Original strand, 3680233 - 3680286
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaa 593  Q
    ||||| ||||| |||| ||||| ||||||||||| | |||||||||||||||||    
T  3680233 atatgtgatggtctgacaatgtgtttataagtgggggcaatcatcacctcacaa 3680286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 604
Target Start/End: Complemental strand, 10314082 - 10314045
Alignment:
Q  567 taagtggagacaatcatcacctcacaaaccggttttgt 604  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  10314082 taagtggaggcaatcgtcacctcacaaaccggttttgt 10314045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 635
Target Start/End: Complemental strand, 12330380 - 12330292
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaa 635  Q
    |||| |||| ||||| ||||||||||| | ||||| ||| ||||||| |||||||||||  ||||||||| | || ||||||||||||||    
T  12330380 atggtctgacaatgtgtttataagtgggg-caatcctcatctcacaagccggttttgtgaggttgtgttaggcccaaccacgatttctaa 12330292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 540 - 617
Target Start/End: Complemental strand, 16722904 - 16722827
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||| ||||| |||||||| | |||||||||||   ||||  ||||||||||| ||| |||||||| ||||||||||    
T  16722904 atatgtgatggcctgataatctgtttataagtgggagcaattctcacctcacaagccgattttgtggggttgtgttag 16722827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 3e-32; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 547 - 697
Target Start/End: Complemental strand, 41667083 - 41666932
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| |||||||||| || | |||||||||||||||||||||||    
T  41667083 atggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatca 41666984  T
Q  646 gagcctcctccttgatctgttgggtcatctgctattgggttttcgttatcgg 697  Q
    |||||||||||  |||| |||||| || |||||||  ||||| |||||||||    
T  41666983 gagcctcctccaagatccgttgggccacctgctatcaggtttccgttatcgg 41666932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 547 - 697
Target Start/End: Complemental strand, 24270195 - 24270045
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcctaccacgatttctaagatggtatcag 646  Q
    |||| |||| ||||| ||||||||||| |  |||  ||||||||||| |||||||||||| |||||||||| || |||||||||| ||||||||||||||    
T  24270195 atggcctgacaatgtatttataagtgggggtaatactcacctcacaagccggttttgtggggttgtgttagaccaaccacgatttttaagatggtatcag 24270096  T
Q  647 agcctcctccttgatctgttgggtcatctgctattgggttttcgttatcgg 697  Q
    ||||||||||  ||||  ||||| || |||||||  ||||| |||||||||    
T  24270095 agcctcctccaagatccattgggccacctgctatcaggtttccgttatcgg 24270045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 547 - 697
Target Start/End: Complemental strand, 24346827 - 24346676
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| |  |||  ||||||||||| |||||||||||| |||||||||| || | ||||||||| |||||||||||||    
T  24346827 atggcctgacaatgtatttataagtgggggtaatactcacctcacaagccggttttgtggggttgtgttagacccaaccacgatttttaagatggtatca 24346728  T
Q  646 gagcctcctccttgatctgttgggtcatctgctattgggttttcgttatcgg 697  Q
    |||||||||||  ||||  ||||| || |||||||  ||||| |||||||||    
T  24346727 gagcctcctccaagatccattgggccacctgctatcaggtttccgttatcgg 24346676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 547 - 652
Target Start/End: Original strand, 24528534 - 24528640
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || |||| |||||||||||||||||||    
T  24528534 atggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatca 24528633  T
Q  646 gagcctc 652  Q
    |||||||    
T  24528634 gagcctc 24528640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 552 - 652
Target Start/End: Original strand, 24531598 - 24531699
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcc 650  Q
    |||| ||||| ||||||||||| | ||||| ||||||||||| ||| |||||||| ||||||||| | || |||||||||||||||||||||||||||||    
T  24531598 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttatgcccaaccacgatttctaagatggtatcagagcc 24531697  T
Q  651 tc 652  Q
    ||    
T  24531698 tc 24531699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 546 - 652
Target Start/End: Original strand, 15480315 - 15480422
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatc 644  Q
    ||||| |||| ||||| ||||||||||| | ||||| ||||||||||| | |||||||||| ||| ||||| | || |||||||||||||||||||||||    
T  15480315 gatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttctgttaggcccaaccacgatttctaagatggtatc 15480414  T
Q  645 agagcctc 652  Q
    ||||||||    
T  15480415 agagcctc 15480422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 544 - 652
Target Start/End: Original strand, 9368586 - 9368695
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggta 642  Q
    |||||||  ||| ||||| ||||||||||||| ||||| ||||||||||| |||||||||||| ||||||||| | || ||||  ||||||||| |||||    
T  9368586 gagatggcgtgacaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccataatttctaaggtggta 9368685  T
Q  643 tcagagcctc 652  Q
    ||||||||||    
T  9368686 tcagagcctc 9368695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 561 - 652
Target Start/End: Complemental strand, 29909797 - 29909705
Alignment:
Q  561 tttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||| | || ||||| |||||||| |||  |||||||||||    
T  29909797 tttttataagtggaggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccaccatttctaatatgacatcagagcctc 29909705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 540 - 689
Target Start/End: Complemental strand, 26137443 - 26137292
Alignment:
Q  540 atatgagatggactgataatgttttt-ataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaaga 637  Q
    ||||||||||| |||| ||||||||| |||||||| ||||||| ||| |||||||   ||||||||||  || |||||| || | ||||||||||||||     
T  26137443 atatgagatggtctgacaatgttttttataagtggcgacaatcctcatctcacaagttggttttgtgggattatgttaggcccaaccacgatttctaagg 26137344  T
Q  638 tggtatcagagcctcctccttgatctgttgggtcatctgctattgggttttc 689  Q
    |||||||||||||| ||||  ||| ||||||| || |||||||  |||||||    
T  26137343 tggtatcagagcctactccaagatttgttgggccacctgctatcaggttttc 26137292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 552 - 638
Target Start/End: Original strand, 38976932 - 38977019
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagat 638  Q
    |||| ||||| ||||||||| | ||||||| |||||||||||||||||||||||||| |||||||| | | |||||||||||||||||    
T  38976932 ctgacaatgtgtttataagttgggacaatcctcacctcacaaaccggttttgtggaggtgtgttaggcacaaccacgatttctaagat 38977019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 547 - 652
Target Start/End: Complemental strand, 2063823 - 2063718
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| | ||||| |||| ||||||  ||||||||||| |||||||||| || | |||||||||||||||||||||||    
T  2063823 atggtctgacaatgtgtttataagtgggggcaatcctcac-tcacaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatca 2063725  T
Q  646 gagcctc 652  Q
    |||||||    
T  2063724 gagcctc 2063718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 563 - 617
Target Start/End: Original strand, 7607604 - 7607658
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  7607604 tttataagtggagacaatcttcacctcacaagccggttttgtggagttgtgttag 7607658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 8098328 - 8098417
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtt-agtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| |||||||| || || |||||||||||||| ||||||||||||||||    
T  8098328 tttataagtgggg-caatcctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaatatggtatcagagcctc 8098417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 563 - 652
Target Start/End: Complemental strand, 21209995 - 21209905
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtt-agtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| ||||||  ||||||||||| |||||||||||| |||||||| || || |||||||||||||| ||||||| ||||||||    
T  21209995 tttataagtggggacaattctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaatatggtattagagcctc 21209905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 552 - 637
Target Start/End: Complemental strand, 32908803 - 32908717
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaaga 637  Q
    |||| ||||| ||||||||||||| ||||||||||||||||||||||||||| || ||| ||||||  || ||||||||||||||||    
T  32908803 ctgacaatgtgtttataagtggaggcaatcatcacctcacaaaccggttttgaggggttatgttagacccaaccacgatttctaaga 32908717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 557 - 640
Target Start/End: Original strand, 24647700 - 24647784
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatgg 640  Q
    ||||| ||||||| ||| | ||||| ||||||||||| |||||||||||||||||||||| |||| ||||||||||||| |||||    
T  24647700 aatgtgtttataactggtggcaatcctcacctcacaagccggttttgtggagttgtgttaggtccaaccacgatttctacgatgg 24647784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 546 - 649
Target Start/End: Complemental strand, 37782141 - 37782037
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatc 644  Q
    ||||| |||| ||||| ||||||||||| | ||||||||||||||||| | ||||||||||||||| |||| | || ||||| || ||||| ||||||||    
T  37782141 gatggtctgacaatgtgtttataagtgggggcaatcatcacctcacaagctggttttgtggagttgagttaggcccaaccaccatgtctaacatggtatc 37782042  T
Q  645 agagc 649  Q
    |||||    
T  37782041 agagc 37782037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 544 - 654
Target Start/End: Complemental strand, 1564660 - 1564549
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggta 642  Q
    ||||||| |||| |||||  |||||||||| | ||||| |||| ||||||  | ||||||||| |||||||||| | | |||||||||||||||||| ||    
T  1564660 gagatggtctgacaatgtgattataagtgggggcaatcctcacatcacaagacagttttgtggggttgtgttaggctcaaccacgatttctaagatgata 1564561  T
Q  643 tcagagcctcct 654  Q
    ||||||||||||    
T  1564560 tcagagcctcct 1564549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 578 - 652
Target Start/End: Complemental strand, 18333758 - 18333683
Alignment:
Q  578 aatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    |||| ||||||||||| |||||||||||| ||||||||| | || ||||||| |||||||||||||||||||||||    
T  18333758 aatcgtcacctcacaagccggttttgtggggttgtgttaggcccaaccacgaattctaagatggtatcagagcctc 18333683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 547 - 637
Target Start/End: Complemental strand, 41666847 - 41666756
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||| |||| ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || ||||||||||||||||    
T  41666847 atggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 41666756  T

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Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 547 - 651
Target Start/End: Complemental strand, 8081204 - 8081098
Alignment:
Q  547 atggactgataatgtttttataagtggaga-caatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatc 644  Q
    |||| |||| ||||| ||||||||||| |  ||||| ||| ||||||| |||||||||||| |||||||||| || | ||| ||||||||||||||||||    
T  8081204 atggcctgacaatgtgtttataagtggggggcaatcctcatctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatc 8081105  T
Q  645 agagcct 651  Q
    |||||||    
T  8081104 agagcct 8081098  T

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Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 13296683 - 13296772
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||| ||||||||||| || ||||||||| |||||||||| || | |||||||||||||||||||||| |||||||    
T  13296683 tttataagtgggggcaatcctcacctcacaagccagttttgtgg-gttgtgttaggcccaaccacgatttctaagatggtatcggagcctc 13296772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 563 - 652
Target Start/End: Complemental strand, 24487719 - 24487629
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| |  |||| ||||||||||| |||||||||||  ||||||||| | || |||||||||||||| ||||||||||||||||    
T  24487719 tttataagtgggggtaatcctcacctcacaagccggttttgtgaggttgtgttaagcccaaccacgatttctaatatggtatcagagcctc 24487629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 547 - 697
Target Start/End: Original strand, 6637596 - 6637747
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttct-aagatggtatc 644  Q
    |||| |||| ||||| ||||||||||| |  |||| ||||||||||| ||||||| | || ||||| ||| | || |||||||||| | |||||||||||    
T  6637596 atggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttt-gcggggttgtattaagcccaaccacgatttattaagatggtatc 6637694  T
Q  645 agagcctcctccttgatctgttgggtcatctgctattgggttttcgttatcgg 697  Q
    ||||||||||||  ||||||||||| ||  |||||| || ||||| |||||||    
T  6637695 agagcctcctccacgatctgttgggccacttgctatcggattttcattatcgg 6637747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 546 - 637
Target Start/End: Complemental strand, 33337329 - 33337237
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtt-agtcctaccacgatttctaaga 637  Q
    ||||| |||| ||| | ||||||||||| | ||||||||||||||||||||| ||||||| || |||||| ||||| |||||||||| |||||    
T  33337329 gatggcctgacaatatgtttataagtgggggcaatcatcacctcacaaaccgattttgtgaagctgtgttaagtccaaccacgatttttaaga 33337237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 596 - 742
Target Start/End: Complemental strand, 17423911 - 17423764
Alignment:
Q  596 cggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagcctcctccttgatctgttgggtcatctgctattgggttttcgttat 694  Q
    ||||||||||| ||| |||||| | | ||||||| |||||||||||||||| |||||| ||   ||||||||| | || |||||||  ||||| || |||    
T  17423911 cggttttgtggggttatgttagcctcaaccacgacttctaagatggtatcaaagcctcttcaaagatctgttgagccacctgctatccggtttccgctat 17423812  T
Q  695 cggatcgctctccatttatatccacgctccagatgtccagtccaaggc 742  Q
    ||||   | | ||||||| ||||| |||||||||||||||||| ||||    
T  17423811 cggacaacccaccatttacatccatgctccagatgtccagtcctaggc 17423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 563 - 649
Target Start/End: Complemental strand, 25258375 - 25258288
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagc 649  Q
    ||||| ||||| | ||||| |||||||||||  ||||||||||| |||||||||  | | ||||||||||||||||||||||||||||    
T  25258375 tttatcagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaaactcaaccacgatttctaagatggtatcagagc 25258288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 563 - 649
Target Start/End: Complemental strand, 25322165 - 25322078
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagc 649  Q
    ||||| ||||| | ||||| |||||||||||  ||||||||||| |||||||||  | | ||||||||||||||||||||||||||||    
T  25322165 tttatcagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaaactcaaccacgatttctaagatggtatcagagc 25322078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 551 - 668
Target Start/End: Original strand, 15438985 - 15439103
Alignment:
Q  551 actgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcct-accacgatttctaagatggtatcagagc 649  Q
    ||||| ||||| | ||||||||| | |||||||||||||||||  | ||||| ||| |||||||||| ||| |||||||||| ||||||| |  ||||||    
T  15438985 actgacaatgtgtctataagtgggggcaatcatcacctcacaagtcagttttatggggttgtgttaggcctaaccacgatttataagatgatgccagagc 15439084  T
Q  650 ctcctccttgatctgttgg 668  Q
    ||||| |  ||||||||||    
T  15439085 ctcctgcaagatctgttgg 15439103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 552 - 637
Target Start/End: Original strand, 19705902 - 19705988
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||| ||||| ||||||||||| | ||||| |||||| | || |||||||||||||||||||||| | || ||||||||||||||||    
T  19705902 ctgacaatgtgtttataagtgggggcaatcctcaccttataagccggttttgtggagttgtgttaggcccaaccacgatttctaaga 19705988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 552 - 617
Target Start/End: Complemental strand, 95351 - 95286
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    |||| ||||| ||||||||||| ||||||| ||| ||||||| |||||||||||| ||||||||||    
T  95351 ctgacaatgtgtttataagtggggacaatcctcatctcacaagccggttttgtggggttgtgttag 95286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 540 - 617
Target Start/End: Original strand, 15438864 - 15438941
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||| |||||||||| ||||||||||| | ||||| ||||||||||| ||| |||| | | ||||||||||    
T  15438864 atatgagatggtctgataatgtgtttataagtgggggcaatcctcacctcacaagccgattttctagggttgtgttag 15438941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 544 - 617
Target Start/End: Complemental strand, 18333558 - 18333485
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||| |||| ||||| ||||||||||| |  |||| ||||||||||| |||||||||||| ||||||||||    
T  18333558 gagatggtctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttag 18333485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 533 - 637
Target Start/End: Original strand, 28510071 - 28510176
Alignment:
Q  533 acatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgattt 631  Q
    |||||| ||| ||||||  |||| ||||| |||||||||| || ||||| ||| |||| || |||||||||||| ||||||||| | || ||||||||||    
T  28510071 acatcagataagagatgacctgacaatgtgtttataagtgaaggcaatcctcatctcataagccggttttgtggggttgtgttaggcccaaccacgattt 28510170  T
Q  632 ctaaga 637  Q
    ||||||    
T  28510171 ctaaga 28510176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 552 - 617
Target Start/End: Original strand, 42295578 - 42295643
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    |||||||| | |||||||||||   ||||| ||||||||||| |||||||||||||||||||||||    
T  42295578 ctgataatttgtttataagtgggagcaatcctcacctcacaagccggttttgtggagttgtgttag 42295643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 563 - 638
Target Start/End: Original strand, 13296902 - 13296978
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagat 638  Q
    ||||||||||| | ||| | ||||||||||||||||||||||||  |||||||||  || |||||||||||||||||    
T  13296902 tttataagtgggggcaaccctcacctcacaaaccggttttgtgggattgtgttagacccaaccacgatttctaagat 13296978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 652
Target Start/End: Complemental strand, 17352748 - 17352652
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||| ||||||||||| |  |||| ||||||||||| ||  ||||| || ||| |||||| ||| ||||| |||||||||||||||||||||||||    
T  17352748 aatgtgtttataagtgggggtaatcttcacctcacaagccaattttgcggggttatgttaggtccaaccaccatttctaagatggtatcagagcctc 17352652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 545 - 637
Target Start/End: Original strand, 18885453 - 18885548
Alignment:
Q  545 agatggactgataatgtttttataagtggagacaatcatcacct--cacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaaga 637  Q
    |||||| |||| ||||| ||||||||||||||||| | ||||||  ||||| || |||||||||||||||||||| | | ||||| ||||||||||    
T  18885453 agatggtctgacaatgtgtttataagtggagacaaccctcacctcacacaagccagttttgtggagttgtgttaggcacaaccaccatttctaaga 18885548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 637
Target Start/End: Complemental strand, 20510733 - 20510641
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||| |||| ||| | ||||||||||| | ||||| |||||||| ||||| ||||||||||||||||||| | || | ||||||||||||||    
T  20510733 gatggcctgacaatatgtttataagtgggggcaatcctcacctcaaaaaccagttttgtggagttgtgttaggcccaaacacgatttctaaga 20510641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 577 - 640
Target Start/End: Complemental strand, 33337515 - 33337451
Alignment:
Q  577 caatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatgg 640  Q
    ||||| ||| |||||||||||||||||||| ||||||||| || | |||||||||||||||||||    
T  33337515 caatcctcatctcacaaaccggttttgtggggttgtgttaggttcaaccacgatttctaagatgg 33337451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 568 - 638
Target Start/End: Complemental strand, 25258163 - 25258092
Alignment:
Q  568 aagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagat 638  Q
    |||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || |||||||||||||||||    
T  25258163 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 25258092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 568 - 638
Target Start/End: Complemental strand, 25321953 - 25321882
Alignment:
Q  568 aagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagat 638  Q
    |||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || |||||||||||||||||    
T  25321953 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 25321882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 533 - 639
Target Start/End: Original strand, 15480537 - 15480646
Alignment:
Q  533 acatcatatatgagatggactgataatgtttttataagtggaga--caatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgat 629  Q
    |||||| |||||| |||| |||| || || ||||||||||| |   ||||| ||||||||||| |||||||||||| ||||||||| | || ||||| ||    
T  15480537 acatcagatatgacatggcctgacaacgtgtttataagtgggggatcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaat 15480636  T
Q  630 ttctaagatg 639  Q
    ||||||||||    
T  15480637 ttctaagatg 15480646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 19522097 - 19522187
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||| ||||| | ||||| ||||||||||| |||||||||||| ||||| || |  || |||||||||||||| ||||||||||| ||||    
T  19522097 tttattagtgggggcaatcctcacctcacaagccggttttgtggggttgtatttgacccaaccacgatttctaatatggtatcagaacctc 19522187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 638
Target Start/End: Original strand, 21306891 - 21306973
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagat 638  Q
    ||||| ||||||||||| | ||||| ||||||||||| ||||| ||||||  |||||||||  || |||||||||||||||||    
T  21306891 aatgtatttataagtgggggcaatcctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaagat 21306973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 638
Target Start/End: Original strand, 21314729 - 21314811
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagat 638  Q
    ||||| ||||||||||| | ||||| ||||||||||| ||||| ||||||  |||||||||  || |||||||||||||||||    
T  21314729 aatgtatttataagtgggggcaatcctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaagat 21314811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 617
Target Start/End: Complemental strand, 29909561 - 29909507
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||  |||||||||    
T  29909561 tttataagtggaggcaatcctcacctcacaaatcggttttgtgggattgtgttag 29909507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 583 - 617
Target Start/End: Original strand, 33177957 - 33177991
Alignment:
Q  583 tcacctcacaaaccggttttgtggagttgtgttag 617  Q
    |||||||||||||||||||||||||||||||||||    
T  33177957 tcacctcacaaaccggttttgtggagttgtgttag 33177991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 540 - 617
Target Start/End: Complemental strand, 6413523 - 6413446
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||  |||| ||||| ||||||||||| | ||||| |||||||| || ||| |||||||| ||||||||||    
T  6413523 atatgagatgacctgacaatgtgtttataagtgggggcaatcctcacctcataagccgattttgtggggttgtgttag 6413446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 540 - 652
Target Start/End: Complemental strand, 6413753 - 6413641
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcctacca-cgatttctaagat 638  Q
    |||||||||| | ||| ||||| ||||||||| | ||||||| |||||||| || |||||||| ||| |||||||||  || | || |||||||||| ||    
T  6413753 atatgagatg-attgacaatgtgtttataagtagggacaatcctcacctcataagccggttttttggggttgtgttaaacccaacaacgatttctaatat 6413655  T
Q  639 ggtatcagagcctc 652  Q
    ||||||| ||||||    
T  6413654 ggtatcaaagcctc 6413641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 540 - 652
Target Start/End: Complemental strand, 6919524 - 6919413
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagat 638  Q
    |||||||||| | ||| ||||| ||||||||||| ||||||  ||||||||||| | | |||||||  |||||||||| | | |||||||||| ||||||    
T  6919524 atatgagatg-attgacaatgtgtttataagtggggacaattctcacctcacaagcag-ttttgtgaggttgtgttaggctcaaccacgatttttaagat 6919427  T
Q  639 ggtatcagagcctc 652  Q
    ||||||| ||||||    
T  6919426 ggtatcaaagcctc 6919413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 605
Target Start/End: Complemental strand, 17352520 - 17352467
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtg 605  Q
    |||| ||||| ||||||||||| | ||||||||||||||||| |||||||||||    
T  17352520 ctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtg 17352467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 635
Target Start/End: Complemental strand, 26137183 - 26137110
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcct-accacgatttctaa 635  Q
    ||||||| ||| | ||||| ||| |||||||||||||||||||| ||| |||||| ||| ||||||||||||||    
T  26137183 tttataaatgggggcaatcctcatctcacaaaccggttttgtggggttatgttagacctaaccacgatttctaa 26137110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 635
Target Start/End: Complemental strand, 27133067 - 27132994
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaa 635  Q
    ||||||||||  | ||||| ||||||||||| |||||||||||| ||||||||| | || ||||||||||||||    
T  27133067 tttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 27132994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 540 - 652
Target Start/End: Complemental strand, 38731935 - 38731822
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagat 638  Q
    ||||||||||  |||| ||||| ||||||||||   |||||| |||||||||||  || |||||||  |||||||||| | | ||||| |||||||||||    
T  38731935 atatgagatgatctgacaatgtgtttataagtgagaacaatcctcacctcacaagtcgattttgtgaggttgtgttaggcacaaccaccatttctaagat 38731836  T
Q  639 ggtatcagagcctc 652  Q
    | ||||| ||||||    
T  38731835 gctatcatagcctc 38731822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 548 - 635
Target Start/End: Original strand, 19522316 - 19522403
Alignment:
Q  548 tggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaa 635  Q
    |||||||| ||| | ||||||||||| | |||| |||||||||||| ||| |||||||| |||||||||| | | ||||||||||||||    
T  19522316 tggactgacaatttatttataagtgggg-caataatcacctcacaagccgattttgtggggttgtgttagacacaaccacgatttctaa 19522403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 547 - 638
Target Start/End: Complemental strand, 24346591 - 24346499
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagat 638  Q
    |||| |||| ||||| ||||||||||| |  |||| ||||||||||| |||||||| ||| |||||||||| | | ||||| |||||||||||    
T  24346591 atggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttttatggggttgtgttaggctcaaccacaatttctaagat 24346499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 617
Target Start/End: Original strand, 60092 - 60151
Alignment:
Q  558 atgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    |||| ||||||||||| | ||||| ||||||||||| |||||||||||| ||| ||||||    
T  60092 atgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttag 60151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 661
Target Start/End: Complemental strand, 1564523 - 1564484
Alignment:
Q  622 accacgatttctaagatggtatcagagcctcctccttgat 661  Q
    |||||||||||||||||| |||||||||||||||| ||||    
T  1564523 accacgatttctaagatgatatcagagcctcctccatgat 1564484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 810 - 849
Target Start/End: Original strand, 15590199 - 15590238
Alignment:
Q  810 aatcctcacctcacagactgattttgtagggttgtgttag 849  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  15590199 aatcctcacctcacaggctgattttgtggggttgtgttag 15590238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 622 - 652
Target Start/End: Complemental strand, 95515 - 95485
Alignment:
Q  622 accacgatttctaagatggtatcagagcctc 652  Q
    |||||||||||||||||||||||||||||||    
T  95515 accacgatttctaagatggtatcagagcctc 95485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 563 - 617
Target Start/End: Original strand, 7369734 - 7369788
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||| | || || ||||||||||| |||||||||||| ||||||||||    
T  7369734 tttataagtgggggcagtcctcacctcacaagccggttttgtggggttgtgttag 7369788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 575 - 652
Target Start/End: Original strand, 20225063 - 20225141
Alignment:
Q  575 gacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||| |||||||||||  || |||||||| ||||||||| || | |||||||||||||| ||| ||||| ||||||    
T  20225063 gacaatcctcacctcacaagtcgattttgtggggttgtgttaggttcaaccacgatttctaaaatgatatcatagcctc 20225141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 612
Target Start/End: Original strand, 8098561 - 8098610
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgt 612  Q
    |||||||| | |||||||| ||||||||||| |||||||||||| |||||    
T  8098561 tttataagcgcagacaatcctcacctcacaagccggttttgtggggttgt 8098610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 596 - 648
Target Start/End: Complemental strand, 13701109 - 13701056
Alignment:
Q  596 cggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagag 648  Q
    ||||||||||| || ||||||| |||| ||||||||||||||||| ||||||||    
T  13701109 cggttttgtggggtcgtgttaggcctaaccacgatttctaagatgatatcagag 13701056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 7e-30; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 533 - 695
Target Start/End: Original strand, 35788639 - 35788802
Alignment:
Q  533 acatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgattt 631  Q
    |||||| ||| || |||| |||| ||||| ||||||||||| | ||||| ||||||||||| |||||||| ||| |||||||||| || | |||||||||    
T  35788639 acatcagataggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgattt 35788738  T
Q  632 ctaagatggtatcagagcctcctccttgatctgttgggtcatctgctattgggttttcgttatc 695  Q
    |||||||||||||||||||||||||  |||| |||||| || |||||||  ||||| |||||||    
T  35788739 ctaagatggtatcagagcctcctccaagatccgttgggccacctgctatcaggtttccgttatc 35788802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 552 - 655
Target Start/End: Original strand, 52559566 - 52559670
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcc 650  Q
    |||| ||||| ||||||||||| | ||||||||||||||||| |||||||||||| ||||||||| | || |||| |||||||||||| |||||||||||    
T  52559566 ctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatagtatcagagcc 52559665  T
Q  651 tcctc 655  Q
    |||||    
T  52559666 tcctc 52559670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 546 - 652
Target Start/End: Complemental strand, 50543658 - 50543551
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatc 644  Q
    ||||| |||| ||||| | ||||||||| | ||||| ||||||||||| |||||||||||||||||||||| | || |||||||||||||||||| ||||    
T  50543658 gatggcctgacaatgtgtgtataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagatgatatc 50543559  T
Q  645 agagcctc 652  Q
    ||||||||    
T  50543558 agagcctc 50543551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 6218214 - 6218304
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||| |||||||||||  |||||||||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  6218214 tttataagtgggggcaatcttcacctcacaagacggttttgtggagttgtgttagacacaaccacgatttctaagatggtatcagagcctc 6218304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 563 - 652
Target Start/End: Complemental strand, 22231382 - 22231292
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || |||||||||||||||||||||||||||||||    
T  22231382 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctc 22231292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 563 - 651
Target Start/End: Original strand, 1518174 - 1518263
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcct-accacgatttctaagatggtatcagagcct 651  Q
    ||||||||||| | ||||| ||| ||||||| |||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||    
T  1518174 tttataagtgggggcaatcctcagctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagatggtatcagagcct 1518263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 552 - 652
Target Start/End: Complemental strand, 40717526 - 40717425
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcc 650  Q
    |||||||| | ||||||||||| | ||||| |||||||| ||  ||||||||||| |||||||||| || | ||||||||||||||||||||||||||||    
T  40717526 ctgataatttgtttataagtgggggcaatcctcacctcaaaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcc 40717427  T
Q  651 tc 652  Q
    ||    
T  40717426 tc 40717425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 577 - 652
Target Start/End: Complemental strand, 14783247 - 14783171
Alignment:
Q  577 caatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||||||||| |||||||||||| ||||||||| | || |||||||||||||| ||||||||||||||||    
T  14783247 caatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctc 14783171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 547 - 637
Target Start/End: Complemental strand, 22231163 - 22231072
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||| |||| ||||| ||||||||||| ||||||| ||||||||||| |||||||||||| ||||| ||| |||| ||||||||||||||||    
T  22231163 atggcctgacaatgtgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtattaggtccaaccacgatttctaaga 22231072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 563 - 648
Target Start/End: Complemental strand, 12869337 - 12869251
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagag 648  Q
    ||||||||||| ||||||| |||||||| ||  ||||||||||| ||||||||| | || |||||||||||||||||||||||||||    
T  12869337 tttataagtggggacaatcctcacctcataagacggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagag 12869251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 563 - 652
Target Start/End: Complemental strand, 35797051 - 35796961
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtt-agtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||| |||||||||||||| ||||||||| |||||||| || || || || |||||||||||||||||||||||||    
T  35797051 tttataagtgggggcaatcctcacctcacaaaccagttttgtggggttgtgttaagcccaactaccatttctaagatggtatcagagcctc 35796961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 563 - 652
Target Start/End: Complemental strand, 53815003 - 53814913
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtt-agtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||| |||||||||||  ||||||||||| |||||||| || || |||||||||||||| ||||||||||||||||    
T  53815003 tttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaagcccaaccacgatttctaatatggtatcagagcctc 53814913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 546 - 650
Target Start/End: Complemental strand, 11036837 - 11036732
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcct-accacgatttctaagatggtatc 644  Q
    ||||| |||| ||||| ||||||||||| | ||||| ||||||||||| ||| || ||||| |||||||||| ||| ||||| |||| ||||||||||||    
T  11036837 gatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattgtgtggggttgtgttaggcctaaccacaatttttaagatggtatc 11036738  T
Q  645 agagcc 650  Q
    ||||||    
T  11036737 agagcc 11036732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 533 - 637
Target Start/End: Complemental strand, 22845551 - 22845446
Alignment:
Q  533 acatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgattt 631  Q
    |||||| |||||| |||| |||| ||||| ||||||||||| |  |||| ||||||||||| |||||||||||| ||||||||| | || ||||||||||    
T  22845551 acatcagatatgacatggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 22845452  T
Q  632 ctaaga 637  Q
    ||||||    
T  22845451 ctaaga 22845446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 563 - 650
Target Start/End: Complemental strand, 35609785 - 35609697
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggtatcagagcc 650  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||| ||  || |||| ||||||||||||||||||||||||    
T  35609785 tttataagtggggccaatcctcacctcacaagccggttttgtggggttgtgtaagacccaaccatgatttctaagatggtatcagagcc 35609697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 546 - 649
Target Start/End: Complemental strand, 50543421 - 50543317
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatc 644  Q
    ||||| |||| ||||| | ||||||||| | ||||| ||||| ||||| |||||||||||| ||||||||| | || |||||||||||||||||| ||||    
T  50543421 gatggtctgacaatgtgtgtataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatgttatc 50543322  T
Q  645 agagc 649  Q
    |||||    
T  50543321 agagc 50543317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 520 - 649
Target Start/End: Complemental strand, 400683 - 400552
Alignment:
Q  520 ttgtgaagagtct-acatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtt-ag 617  Q
    |||| |||||||| |||||| ||||||||||| |||| ||||| ||||||||||| |  |||| ||||||||||| |||||||||||  |||||||| ||    
T  400683 ttgttaagagtctcacatcagatatgagatggtctgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtgaggttgtgttaag 400584  T
Q  618 tcctaccacgatttctaagatggtatcagagc 649  Q
      | ||||| ||||||||  ||||||||||||    
T  400583 ctcaaccacaatttctaacctggtatcagagc 400552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 563 - 649
Target Start/End: Original strand, 21498364 - 21498451
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagc 649  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||| ||||| | || |||||||||||||| |||||||||||||    
T  21498364 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttaggcccaaccacgatttctaatatggtatcagagc 21498451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 525 - 637
Target Start/End: Original strand, 6218410 - 6218524
Alignment:
Q  525 aagagtct-acatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-cta 622  Q
    |||||||| |||||| ||| ||||||  || | ||||| ||||||||||| | ||||||||||||||||| |||||||| |||| ||||||||| | | |    
T  6218410 aagagtctcacatcagataggagatgacctaacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttatggaattgtgttaggctcaa 6218509  T
Q  623 ccacgatttctaaga 637  Q
    |||||||||||||||    
T  6218510 ccacgatttctaaga 6218524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 9685408 - 9685498
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||| |||||||||||  ||||||||||  ||||||||| | || |||||||||||||| ||||||||||||||||    
T  9685408 tttataagtggggccaatcctcacctcacaagtcggttttgtgaggttgtgttaggcccaaccacgatttctaatatggtatcagagcctc 9685498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 545 - 637
Target Start/End: Original strand, 22863466 - 22863559
Alignment:
Q  545 agatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||||| |||| ||||| ||||||||||| | ||||| ||||| ||||| |||||||||||| ||||||||| | || ||||||||||||||||    
T  22863466 agatggcctgacaatgtgtttataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 22863559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 557 - 645
Target Start/End: Original strand, 37836084 - 37836173
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcct-accacgatttctaagatggtatca 645  Q
    ||||| ||||||||||| | ||||| || ||| |||| |||||||||||| |||||||||| ||| ||||| ||||||||||||||||||    
T  37836084 aatgtatttataagtgggggcaatcctctccttacaagccggttttgtggggttgtgttaggcctaaccacaatttctaagatggtatca 37836173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 563 - 651
Target Start/End: Complemental strand, 53828597 - 53828508
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcct 651  Q
    ||||||||||| | ||||| |||||||| || ||| |||||||| ||||||||| | || ||||| ||||||||||||||||||||||||    
T  53828597 tttataagtgggggcaatcctcacctcataagccgattttgtggggttgtgttaggcccaaccacaatttctaagatggtatcagagcct 53828508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 546 - 617
Target Start/End: Original strand, 9279220 - 9279291
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||| |||| ||||| ||||||||||| | ||||||||||||||| | |||||||||||| ||||||||||    
T  9279220 gatggcctgacaatgtgtttataagtgggggcaatcatcacctcactagccggttttgtggggttgtgttag 9279291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 525 - 638
Target Start/End: Complemental strand, 18528330 - 18528215
Alignment:
Q  525 aagagtct-acatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tccta 622  Q
    |||||||| |||||| ||| |||||||  ||  ||||| ||||||||||| | ||||| |||||||||||| || |||||| | |||||||||| ||| |    
T  18528330 aagagtctcacatcaaatacgagatggcatggcaatgtgtttataagtggcggcaatcctcacctcacaaatcgattttgtagggttgtgttagatccaa 18528231  T
Q  623 ccacgatttctaagat 638  Q
    ||||||||||||||||    
T  18528230 ccacgatttctaagat 18528215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 563 - 649
Target Start/End: Original strand, 25052862 - 25052949
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagc 649  Q
    ||||||||||| |  ||||  |||||||||| |||||||||||| ||||||||| | || |||||||||||||| |||||||||||||    
T  25052862 tttataagtgggggtaatccgcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaacatggtatcagagc 25052949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 546 - 617
Target Start/End: Complemental strand, 28245617 - 28245546
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||| |||| ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||||    
T  28245617 gatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 28245546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 547 - 637
Target Start/End: Original strand, 35788888 - 35788979
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||| |||| ||||| ||||||||||| | ||||| ||| ||||||| |||||||||||| ||||||||| | || ||||||||||||||||    
T  35788888 atggcctgacaatgtgtttataagtgggggcaatcctcatctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35788979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 563 - 617
Target Start/End: Complemental strand, 12869103 - 12869049
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||| | ||||||||||||||||| |||||||||||| ||||||||||    
T  12869103 tttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttag 12869049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 563 - 648
Target Start/End: Original strand, 17111574 - 17111659
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagag 648  Q
    ||||||||||| | ||||| |||||| | |||| |||||||||| |||||||||| || | ||||||||||||||||||||||||||    
T  17111574 tttataagtgggg-caatcctcaccttaaaaactggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagag 17111659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 577 - 654
Target Start/End: Complemental strand, 18528517 - 18528439
Alignment:
Q  577 caatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctcct 654  Q
    ||||| |||||||||||| ||||||||||   || |||||| || | ||||||||||||||||||||||||||||||||    
T  18528517 caatcctcacctcacaaatcggttttgtgagattttgttagacccaaccacgatttctaagatggtatcagagcctcct 18528439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 544 - 637
Target Start/End: Original strand, 22827529 - 22827623
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||||| |||| || || ||||||||||| | ||||| ||||||||||| |||||||||| | ||||||||| | || ||||||||||||||||    
T  22827529 gagatggcctgacaacgtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttaggcccaaccacgatttctaaga 22827623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 572 - 697
Target Start/End: Complemental strand, 40716686 - 40716560
Alignment:
Q  572 ggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctcctccttgatctgttgggt 670  Q
    |||| ||||| | |||| |||| |||| ||||||| |||||||||| || | ||| | |||||||||||||||||||||||| |||  |||| ||||||     
T  40716686 ggaggcaatccttaccttacaagccggatttgtggggttgtgttaggcccaaccatggtttctaagatggtatcagagcctcatccacgatccgttgggc 40716587  T
Q  671 catctgctattgggttttcgttatcgg 697  Q
    || |||||||  ||||| |||||||||    
T  40716586 cacctgctatcaggtttccgttatcgg 40716560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 572 - 652
Target Start/End: Original strand, 4645661 - 4645742
Alignment:
Q  572 ggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||||||||| |||| ||||||||||||  ||||||||| | | |||| ||||| |||||| |||||||||||||    
T  4645661 ggagacaatcatcaccttacaagccggttttgtgggattgtgttagactcaaccatgatttataagatagtatcagagcctc 4645742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 563 - 635
Target Start/End: Original strand, 21498805 - 21498878
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaa 635  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || ||||||||||||||    
T  21498805 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 21498878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 552 - 652
Target Start/End: Complemental strand, 34358115 - 34358014
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagcc 650  Q
    |||| ||||| ||||||| ||| | ||||| |||| ||| || |||||||||||| |||||||||| | | | |||||||||||||||| ||||||||||    
T  34358115 ctgacaatgtgtttataaatgggggcaatcctcacatcagaagccggttttgtggggttgtgttaggctcaaacacgatttctaagatgatatcagagcc 34358016  T
Q  651 tc 652  Q
    ||    
T  34358015 tc 34358014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 35796822 - 35796741
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtt-agtcctaccacgatttctaaga 637  Q
    ||||| ||||||||||| | ||||| ||||||||||| |||||||||||  |||||||| ||||| ||||| ||||||||||    
T  35796822 aatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtgaggttgtgttaagtccaaccaccatttctaaga 35796741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 558 - 649
Target Start/End: Original strand, 8902632 - 8902724
Alignment:
Q  558 atgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggtatcagagc 649  Q
    |||| ||||| ||||||| ||||| || |||||||| || ||||||||| ||| |||||| ||| ||||||||| ||| ||||||||||||||    
T  8902632 atgtgtttattagtggaggcaatcctctcctcacaagccagttttgtggggttatgttaggtccaaccacgattgctaggatggtatcagagc 8902724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 640
Target Start/End: Complemental strand, 11036591 - 11036507
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatgg 640  Q
    ||||| ||||||||| | | ||||||||||||||||| ||||||||| || ||||||||||  || ||||| |||||||||||||    
T  11036591 aatgtgtttataagttggggcaatcatcacctcacaagccggttttgcggggttgtgttagacccaaccacaatttctaagatgg 11036507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 577 - 639
Target Start/End: Complemental strand, 5398536 - 5398473
Alignment:
Q  577 caatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatg 639  Q
    ||||| ||||||||||| |||||||||||| ||||||||| |||| |||| |||||||||||||    
T  5398536 caatcctcacctcacaagccggttttgtggggttgtgttaggtccaaccatgatttctaagatg 5398473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 563 - 645
Target Start/End: Original strand, 5846156 - 5846239
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatca 645  Q
    ||||||||||| | ||||| |||||||| || |||||||||||| |||| ||||| | | |||||||||||||| |||||||||    
T  5846156 tttataagtgggggcaatcctcacctcataagccggttttgtggggttgcgttaggctcaaccacgatttctaatatggtatca 5846239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 558 - 652
Target Start/End: Original strand, 21041356 - 21041451
Alignment:
Q  558 atgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagcctc 652  Q
    |||| ||||||||||| || |||| ||||||||||||||||||||| | |||| |||||| | | ||||| | ||||||||| |||| ||||||||    
T  21041356 atgtgtttataagtggggaaaatcctcacctcacaaaccggttttgcgaagttatgttaggcacaaccacaaattctaagatagtattagagcctc 21041451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 547 - 637
Target Start/End: Complemental strand, 39902653 - 39902562
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||| |||| ||||| ||||||||||| | ||||| ||||||||||| | |||||||||| ||||||||| | || ||||| ||||||||||    
T  39902653 atggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccaccatttctaaga 39902562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 613
Target Start/End: Complemental strand, 27464322 - 27464272
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtg 613  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||| ||||||    
T  27464322 tttataagtggaggcaatcctcacctcacaagccggttttgtggggttgtg 27464272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 544 - 637
Target Start/End: Complemental strand, 44118952 - 44118858
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaaga 637  Q
    ||||||| |||| ||||| ||||||||||| |  |||| ||||||||||| || ||||||||| ||||||||||  || |||||||||| |||||    
T  44118952 gagatggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagcccgttttgtggggttgtgttagagcccaccacgatttataaga 44118858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 616
Target Start/End: Complemental strand, 2261827 - 2261774
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta 616  Q
    ||||||||||| ||||||| |||||||||| ||| ||||||||| |||||||||    
T  2261827 tttataagtggggacaatcctcacctcacagaccagttttgtggggttgtgtta 2261774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 588 - 696
Target Start/End: Original strand, 4464330 - 4464439
Alignment:
Q  588 tcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctcctccttgatctgttgggtcatctgctattgggtt 686  Q
    |||||| ||| |||||||| ||| |||||| || | |||||| ||||||||||||||||||||||||| |  ||||  ||||||||  ||||||  ||||    
T  4464330 tcacaagccgattttgtggggttttgttagacccaaccacgaattctaagatggtatcagagcctccttcaagatccattgggtcacatgctatcaggtt 4464429  T
Q  687 ttcgttatcg 696  Q
    | ||||||||    
T  4464430 tccgttatcg 4464439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 568 - 652
Target Start/End: Complemental strand, 6666704 - 6666619
Alignment:
Q  568 aagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctc 652  Q
    |||||| | ||||| | ||||||||||||||||||||||  |||| |||| || | ||||||||||||||||||||| ||| ||||    
T  6666704 aagtgggggcaatccttacctcacaaaccggttttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctc 6666619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 635
Target Start/End: Original strand, 9685642 - 9685715
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaa 635  Q
    ||||||||||| | ||||| ||||||||||| |||||||| ||| ||||||||| | || ||||||||||||||    
T  9685642 tttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaa 9685715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 635
Target Start/End: Complemental strand, 53814748 - 53814675
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaa 635  Q
    ||||||||||| || |||| ||||||||||| ||||||||||||  |||||||| | || ||||||||||||||    
T  53814748 tttataagtggggataatcctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaa 53814675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 545 - 652
Target Start/End: Original strand, 7926320 - 7926428
Alignment:
Q  545 agatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtat 643  Q
    |||||| ||||  |||| ||||||||||| | || || ||||  ||||| |||||||||||| | |||||||| || | ||| |||||| ||||||||||    
T  7926320 agatggcctgaacatgtgtttataagtgggggcattcctcacaacacaagccggttttgtggggctgtgttaggcccaaccaagatttcgaagatggtat 7926419  T
Q  644 cagagcctc 652  Q
    |||||||||    
T  7926420 cagagcctc 7926428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 810 - 869
Target Start/End: Complemental strand, 18528276 - 18528216
Alignment:
Q  810 aatcctcacctcacagactgattttgtagggttgtgttaga-cgtaccacgatttctaaga 869  Q
    ||||||||||||||| |  |||||||||||||||||||||| |  ||||||||||||||||    
T  18528276 aatcctcacctcacaaatcgattttgtagggttgtgttagatccaaccacgatttctaaga 18528216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 563 - 654
Target Start/End: Original strand, 22822360 - 22822452
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggtatcagagcctcct 654  Q
    ||||||||||| |  |||| ||||| ||||| |||||||||||  ||||| |||| ||| ||||| | ||||||||| |||||||||||||||    
T  22822360 tttataagtgggggaaatcctcaccacacaagccggttttgtgcggttgtattaggtccaaccacaaattctaagattgtatcagagcctcct 22822452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 565 - 680
Target Start/End: Complemental strand, 24513431 - 24513316
Alignment:
Q  565 tataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcctac-cacgatttctaagatggtatcagagcctcctccttgatct 663  Q
    ||||||||| | ||||| ||||||||||| ||||||| || | |||||||||| || |  |||||||||||| ||| |||||||||||||||   |||||    
T  24513431 tataagtgggggcaatcctcacctcacaagccggttt-gtagggttgtgttaggcccaatcacgatttctaacatgatatcagagcctcctctaagatct 24513333  T
Q  664 gttgggtcatctgctat 680  Q
     ||||  ||||||||||    
T  24513332 attggaccatctgctat 24513316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 612
Target Start/End: Complemental strand, 28246165 - 28246110
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgt 612  Q
    ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| |||||    
T  28246165 aatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgt 28246110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 586 - 637
Target Start/End: Complemental strand, 31039397 - 31039346
Alignment:
Q  586 cctcacaaaccggttttgtggagttgtgttagtcctaccacgatttctaaga 637  Q
    ||||||||  |||||||||||||||||||||| || ||||| ||||||||||    
T  31039397 cctcacaagtcggttttgtggagttgtgttaggccaaccacaatttctaaga 31039346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 605
Target Start/End: Complemental strand, 31254498 - 31254439
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtg 605  Q
    ||||| |||| ||||| ||||||||||| | ||||| |||||| ||||||||||||||||    
T  31254498 gatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaaaccggttttgtg 31254439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 563 - 617
Target Start/End: Complemental strand, 6666274 - 6666220
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||| ||| | ||||| ||||||||||||| |||||||||| ||||||||||    
T  6666274 tttataattgggggcaatcctcacctcacaaacaggttttgtggggttgtgttag 6666220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 525 - 637
Target Start/End: Original strand, 20095263 - 20095377
Alignment:
Q  525 aagagtct-acatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta- 622  Q
    |||||||| |||||| |||  ||||||  ||||||||| |||| || ||| |||||||  ||||||||||||| ||||||| | |||||||||| || |     
T  20095263 aagagtctcacatcagataatagatggcatgataatgtgtttagaaatggggacaatctccacctcacaaaccagttttgttgggttgtgttagacccac 20095362  T
Q  623 ccacgatttctaaga 637  Q
    ||| |||||||||||    
T  20095363 ccatgatttctaaga 20095377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 583 - 652
Target Start/End: Complemental strand, 21750331 - 21750261
Alignment:
Q  583 tcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggtatcagagcctc 652  Q
    |||||||||||||| ||||||||  ||||||||||  || | ||||| || ||||||||||||||||||||    
T  21750331 tcacctcacaaaccagttttgtgaggttgtgttagacccaatcacgaattttaagatggtatcagagcctc 21750261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 563 - 617
Target Start/End: Complemental strand, 42684867 - 42684813
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||| ||| | ||||||||||||||||| |||||||||||| |||| |||||    
T  42684867 tttataaatgggggcaatcatcacctcacaagccggttttgtggcgttgagttag 42684813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 563 - 617
Target Start/End: Complemental strand, 53828363 - 53828309
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||| | ||||| |||||||| |||||| |||||||| ||||||||||    
T  53828363 tttataagtgggggcaatcctcacctcataaaccgattttgtggggttgtgttag 53828309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 635
Target Start/End: Original strand, 20821983 - 20822056
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaa 635  Q
    ||||||||||| | ||||  ||||||||||| ||||||||||||  |||||||| | || ||||||||||||||    
T  20821983 tttataagtgggggcaattctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaa 20822056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 596 - 652
Target Start/End: Original strand, 22445495 - 22445552
Alignment:
Q  596 cggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| |||||||||| || | |||| | |||||||||||||||||||||||    
T  22445495 cggttttgtggggttgtgttagacccaaccacaaattctaagatggtatcagagcctc 22445552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 604
Target Start/End: Complemental strand, 27634171 - 27634114
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgt 604  Q
    |||| |||| ||||| ||||||||||| | ||||| ||||||||||||||| ||||||    
T  27634171 atggcctgacaatgtgtttataagtgggggcaatcctcacctcacaaaccgattttgt 27634114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 28073261 - 28073180
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||| |||| |||||||| ||| | ||||||||||| | |||||||||| ||||||||| | || ||||| ||||||||||    
T  28073261 aatgtatttacaagtggaggcaaccctcacctcacaagctggttttgtggggttgtgttaggcccaaccacaatttctaaga 28073180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 578 - 654
Target Start/End: Original strand, 30305299 - 30305376
Alignment:
Q  578 aatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctcct 654  Q
    ||||||||||||||||| |  |||||||||||||||||| |  | |||||||||| ||| ||||  ||||||||||||    
T  30305299 aatcatcacctcacaaatcaattttgtggagttgtgttatgctcaaccacgatttttaatatggcgtcagagcctcct 30305376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 637
Target Start/End: Complemental strand, 41188024 - 41187931
Alignment:
Q  545 agatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||||| |||| ||||| |||||||||  || ||||| |||||||||||   |||||||||| |||| |||| | || ||||||||||||||||    
T  41188024 agatggtctgacaatgtatttataagtaaaggcaatcctcacctcacaagttggttttgtggggttgagttatgcccaaccacgatttctaaga 41187931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 7e-30; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 533 - 656
Target Start/End: Complemental strand, 39348456 - 39348333
Alignment:
Q  533 acatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcctaccacgatttc 632  Q
    |||||| ||| |||||||  ||| || || ||||||||||| | ||||| |||||||||||||||||||||||| |||||||||| || | |||||||||    
T  39348456 acatcagataggagatggcttgacaacgtgtttataagtgggggcaatcctcacctcacaaaccggttttgtggggttgtgttaggcccaacacgatttc 39348357  T
Q  633 taagatggtatcagagcctcctcc 656  Q
    ||||||||||||||||||||||||    
T  39348356 taagatggtatcagagcctcctcc 39348333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 558 - 655
Target Start/End: Complemental strand, 26347047 - 26346950
Alignment:
Q  558 atgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcctaccacgatttctaagatggtatcagagcctcctc 655  Q
    |||| ||||||||||||||||||| ||||||||||| || ||||||||| |||||||||| |  |||||||||||||||||| |||||||||||||||    
T  26347047 atgtgtttataagtggagacaatcctcacctcacaagcccgttttgtggggttgtgttagcctcaccacgatttctaagatgatatcagagcctcctc 26346950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 547 - 652
Target Start/End: Complemental strand, 17452918 - 17452812
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcct-accacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| |||||||||| ||| |||||||||||||||||||||| |    
T  17452918 atggcctgacaatgtatttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagatggtatta 17452819  T
Q  646 gagcctc 652  Q
    |||||||    
T  17452818 gagcctc 17452812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 547 - 652
Target Start/End: Complemental strand, 4113096 - 4112990
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || |||||||||||||||||||||||     
T  4113096 atggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcg 4112997  T
Q  646 gagcctc 652  Q
    |||||||    
T  4112996 gagcctc 4112990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 577 - 697
Target Start/End: Original strand, 33156757 - 33156878
Alignment:
Q  577 caatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctcctccttgatctgttgggtcatct 675  Q
    ||||| ||| |||||||||||||||||||| |||||||||| || | ||||||||||||||||||||| ||||||| ||||  |||| ||||| ||| ||    
T  33156757 caatcctcatctcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtattagagcctactccaagatccgttggttcacct 33156856  T
Q  676 gctattgggttttcgttatcgg 697  Q
    |||||  ||||| || ||||||    
T  33156857 gctatcaggtttccgctatcgg 33156878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 565 - 652
Target Start/End: Original strand, 27413359 - 27413447
Alignment:
Q  565 tataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||| ||||||||||| ||||||||||| ||| |||||||  ||||||||| |||| |||||||||||||||||| ||||||||||||    
T  27413359 tataactggagacaatcctcacctcacaagccgattttgtgaggttgtgttaggtccaaccacgatttctaagatgatatcagagcctc 27413447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 563 - 649
Target Start/End: Original strand, 51589236 - 51589323
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcct-accacgatttctaagatggtatcagagc 649  Q
    ||||||||||  | ||||| ||||||||||| |||||||||||| |||||||||| ||| |||||||||||||| |||||||||||||    
T  51589236 tttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaatatggtatcagagc 51589323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 563 - 648
Target Start/End: Original strand, 3169776 - 3169862
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagag 648  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || |||||||||||||| ||||||||||||    
T  3169776 tttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagag 3169862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 546 - 638
Target Start/End: Original strand, 25713386 - 25713479
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcct-accacgatttctaagat 638  Q
    ||||| |||| ||||| ||||||||||| | ||||| ||||||||||| || |||||||||||||||||||| ||| ||||| |||||||||||    
T  25713386 gatggtctgacaatgtgtttataagtgggggcaatcgtcacctcacaagccagttttgtggagttgtgttaggcctaaccaccatttctaagat 25713479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 533 - 648
Target Start/End: Original strand, 35892271 - 35892387
Alignment:
Q  533 acatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgattt 631  Q
    |||||| |||| |||||| |||| ||||| ||||||||||| | ||||  ||||||||||| |||||||||||| ||| |||||| | | ||||  ||||    
T  35892271 acatcagatataagatggtctgacaatgtatttataagtgggggcaatactcacctcacaacccggttttgtggggttctgttaggctcaaccataattt 35892370  T
Q  632 ctaagatggtatcagag 648  Q
    |||||||||||||||||    
T  35892371 ctaagatggtatcagag 35892387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 533 - 635
Target Start/End: Complemental strand, 17452783 - 17452680
Alignment:
Q  533 acatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgattt 631  Q
    |||||| ||| || |||| |||| ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || ||||||||||    
T  17452783 acatcagataagacatggcctgacaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 17452684  T
Q  632 ctaa 635  Q
    ||||    
T  17452683 ctaa 17452680  T

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Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 651
Target Start/End: Original strand, 35772053 - 35772128
Alignment:
Q  577 caatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcct 651  Q
    ||||| ||||||| ||| |||||||||||| |||||||||| || | |||||||||||||||||||||||||||||    
T  35772053 caatcctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcct 35772128  T

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Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 531 - 637
Target Start/End: Original strand, 40079130 - 40079237
Alignment:
Q  531 ctacatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgat 629  Q
    |||||||  ||| ||||||  |||| ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || ||||||||    
T  40079130 ctacatcggataggagatgacctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgat 40079229  T
Q  630 ttctaaga 637  Q
    ||||||||    
T  40079230 ttctaaga 40079237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 547 - 652
Target Start/End: Original strand, 26176902 - 26177008
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatca 645  Q
    |||| |||| |||||  |||||||||  | ||||| |||||||| ||||||||||||||| ||||||||| | || ||| |||||||||||||| |||||    
T  26176902 atggcctgacaatgtgcttataagtgagggcaatcctcacctcaaaaaccggttttgtggggttgtgttaggcccaaccgcgatttctaagatgatatca 26177001  T
Q  646 gagcctc 652  Q
    |||||||    
T  26177002 gagcctc 26177008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 51589816 - 51589906
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||  | ||||| ||||||||||| ||| |||||||| ||||||||| | || |||||||||||||| ||||||||||||||||    
T  51589816 tttataagtgagggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctc 51589906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 552 - 652
Target Start/End: Complemental strand, 25145805 - 25145704
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcc 650  Q
    |||| ||||| ||||| ||||| | ||||| ||||||||||| |||| ||||||| ||||||||| | || |||| ||||||||||||| ||||||||||    
T  25145805 ctgacaatgtatttattagtgggggcaatcctcacctcacaagccggatttgtggggttgtgttaggcccaaccatgatttctaagatgatatcagagcc 25145706  T
Q  651 tc 652  Q
    ||    
T  25145705 tc 25145704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 533 - 652
Target Start/End: Complemental strand, 26173560 - 26173440
Alignment:
Q  533 acatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgattt 631  Q
    |||||| ||||||||||| |||| ||||| ||||||||||| | ||||  ||||||   || |||||||||||| ||||||||| |||| |||||  |||    
T  26173560 acatcagatatgagatggtctgacaatgtgtttataagtgggggcaattctcaccttgtaagccggttttgtggggttgtgttaggtccaaccacccttt 26173461  T
Q  632 ctaagatggtatcagagcctc 652  Q
    |||| ||| ||||||||||||    
T  26173460 ctaaaatgatatcagagcctc 26173440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 557 - 652
Target Start/End: Original strand, 38668129 - 38668225
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||| ||||||||||| | ||||||||| ||||||| ||  |||||||| ||||||||| | || | ||| |||||||||||||||||||||||||    
T  38668129 aatgtgtttataagtgggggcaatcatcatctcacaagccaattttgtggggttgtgttaggcccaatcacaatttctaagatggtatcagagcctc 38668225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 558 - 649
Target Start/End: Complemental strand, 40316129 - 40316037
Alignment:
Q  558 atgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggtatcagagc 649  Q
    |||| ||||||||||| | ||||| |||||||| || |||||||||||  |||||||||| ||| |||||||||||||| ||||||| |||||    
T  40316129 atgtgtttataagtggggtcaatcctcacctcataagccggttttgtgaggttgtgttagatccaaccacgatttctaacatggtattagagc 40316037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 544 - 638
Target Start/End: Original strand, 35772255 - 35772350
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagat 638  Q
    ||||||| |||| ||||| ||||||||||| | ||||| | |||||| || |||||||||||| ||||||||| | || |||||||||||||||||    
T  35772255 gagatggcctgacaatgtgtttataagtgggggcaatccttacctcagaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 35772350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 51589002 - 51589092
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||  | ||||| ||||||||||| |||||||||||| ||||||||| | || ||||| |||||||| ||||||||| ||||||    
T  51589002 tttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaatatggtatcaaagcctc 51589092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 552 - 648
Target Start/End: Complemental strand, 8870995 - 8870898
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggtatcagag 648  Q
    |||| ||||| ||||||||| | | ||||  |||||||| || ||| |||||||| |||||||||| ||| ||||| |||||||||||||||||||||    
T  8870995 ctgacaatgtgtttataagttggggcaattctcacctcataagccgtttttgtggggttgtgttaggtccaaccaccatttctaagatggtatcagag 8870898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 540 - 652
Target Start/End: Original strand, 30369822 - 30369935
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagat 638  Q
    ||||||||||| | || ||| | ||||||||| | | ||||| |||||||||||    ||||||||| |||||||||| || | ||||||||||||||||    
T  30369822 atatgagatggtccgacaatatgtttataagtaggggcaatcctcacctcacaagatagttttgtggggttgtgttaggcccaaccacgatttctaagat 30369921  T
Q  639 ggtatcagagcctc 652  Q
     |||||||||||||    
T  30369922 tgtatcagagcctc 30369935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 540 - 648
Target Start/End: Original strand, 38733139 - 38733247
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagat 638  Q
    ||||| ||||| |||| ||||| ||||||||||| ||||||  ||| |||||||  ||||||||||   ||||||||| | | |||||||||||||||||    
T  38733139 atatgtgatggtctgacaatgtgtttataagtgg-gacaattctcatctcacaagtcggttttgtgagattgtgttaggttcaaccacgatttctaagat 38733237  T
Q  639 ggtatcagag 648  Q
    ||||||||||    
T  38733238 ggtatcagag 38733247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 553 - 648
Target Start/End: Complemental strand, 4098486 - 4098391
Alignment:
Q  553 tgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagag 648  Q
    ||||||||| ||||||||||| | ||||| |||||| ||||   |||||||||| |||||||||| || | |||||||||||||| |||||||||||    
T  4098486 tgataatgtgtttataagtgggggcaatcctcaccttacaagttggttttgtgg-gttgtgttaggcccaaccacgatttctaagttggtatcagag 4098391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 583 - 654
Target Start/End: Original strand, 11525027 - 11525099
Alignment:
Q  583 tcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctcct 654  Q
    ||||| ||||| |||||||||||  |||||||||| || | |||| |||||||||||||||||||||||||||    
T  11525027 tcaccccacaatccggttttgtgaggttgtgttaggcccatccacaatttctaagatggtatcagagcctcct 11525099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 638
Target Start/End: Original strand, 43409801 - 43409892
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagat 638  Q
    |||| |||| ||||| ||||||||||| | ||||  ||||||||||| ||||||||| || ||||||||| |||| |||||||||||||||||    
T  43409801 atggtctgacaatgtatttataagtgggg-caattctcacctcacaagccggttttggggggttgtgttatgtccaaccacgatttctaagat 43409892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 546 - 652
Target Start/End: Complemental strand, 2859718 - 2859611
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggtatc 644  Q
    ||||| |||| ||||| ||||| ||||| |  |||| ||||||||||| |||||||||||  ||||||||||  || ||||  ||||||||||||||||     
T  2859718 gatggtctgacaatgtgtttattagtgggggtaatcctcacctcacaagccggttttgtgaggttgtgttagccccaaccatcatttctaagatggtatt 2859619  T
Q  645 agagcctc 652  Q
    ||||||||    
T  2859618 agagcctc 2859611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 531 - 637
Target Start/End: Complemental strand, 15986439 - 15986332
Alignment:
Q  531 ctacatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgat 629  Q
    |||||||  ||| ||||| | |||| ||||| ||||||||||| | ||||| ||||||||||| | ||| |||||| ||||||||| |||| ||||| ||    
T  15986439 ctacatcggataggagatagcctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggtattgtggggttgtgttaggtccaaccaccat 15986340  T
Q  630 ttctaaga 637  Q
    ||||||||    
T  15986339 ttctaaga 15986332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 563 - 637
Target Start/End: Original strand, 26177153 - 26177228
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||||||||| | ||||| |||||||| ||||| ||||||||| ||||||||| | || ||||||||||||||||    
T  26177153 tttataagtgggggcaatcctcacctcaaaaaccagttttgtggggttgtgttaggcccaaccacgatttctaaga 26177228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 583 - 649
Target Start/End: Original strand, 29265983 - 29266050
Alignment:
Q  583 tcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagc 649  Q
    |||||| |||| | |||||||||| |||||||||| || | |||||||||||||||||||||||||||    
T  29265983 tcaccttacaagctggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagc 29266050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 563 - 637
Target Start/End: Complemental strand, 41035901 - 41035826
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||||||||| | ||||| ||||||||||| ||||||||||||  |||||||| |||| || |||||||||||||    
T  41035901 tttataagtgggggcaatcctcacctcacaagccggttttgtgggattgtgttaggtccaactacgatttctaaga 41035826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 617
Target Start/End: Complemental strand, 12245036 - 12244982
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||||    
T  12245036 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 12244982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 583 - 652
Target Start/End: Original strand, 25255341 - 25255410
Alignment:
Q  583 tcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| |||||||||||| ||||||||| | || ||||||||||||||||| |||||||| ||||    
T  25255341 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat-gtatcagatcctc 25255410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 606
Target Start/End: Complemental strand, 26173309 - 26173255
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtgg 606  Q
    |||| ||||| ||||||||||| | ||||||||||||||||| ||||||||||||    
T  26173309 ctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtgg 26173255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 558 - 616
Target Start/End: Complemental strand, 49316224 - 49316166
Alignment:
Q  558 atgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta 616  Q
    |||| ||||||||||| ||||||| ||| |||||||| | |||||||||||||||||||    
T  49316224 atgtgtttataagtggggacaatcttcatctcacaaatcagttttgtggagttgtgtta 49316166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 546 - 638
Target Start/End: Complemental strand, 25145576 - 25145483
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagat 638  Q
    ||||| |||| ||||| ||||| ||||| | ||||| |||||||||||  ||||||||||  ||||||||||  || |||||||||||||||||    
T  25145576 gatggtctgacaatgtgtttattagtgggggcaatcctcacctcacaagtcggttttgtgaggttgtgttagacccaaccacgatttctaagat 25145483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 540 - 617
Target Start/End: Original strand, 39808453 - 39808529
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||| ||||| |||| ||||| ||||||||||| ||||||| ||||| | |||||||||||||||| | ||||||||    
T  39808453 atatgtgatggtctgacaatgtgtttataagtggggacaatcctcacc-cccaaaccggttttgtggggctgtgttag 39808529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 617
Target Start/End: Complemental strand, 52650864 - 52650791
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||| | || ||||| ||||||||||| | ||||| ||||||||||| | |||||||||| ||||||||||    
T  52650864 gagatggccggacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgttag 52650791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 546 - 637
Target Start/End: Original strand, 27413575 - 27413667
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaaga 637  Q
    ||||| |||| ||| | ||||||||||||| ||||| |||||||||||| ||||||| ||  |||||||||| | | |||| |||||||||||    
T  27413575 gatggcctgacaatatgtttataagtggaggcaatcctcacctcacaaatcggttttatgaggttgtgttaggctcaaccatgatttctaaga 27413667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 672
Target Start/End: Original strand, 9632072 - 9632107
Alignment:
Q  637 atggtatcagagcctcctccttgatctgttgggtca 672  Q
    ||||||||||||||| ||||||||||||||||||||    
T  9632072 atggtatcagagccttctccttgatctgttgggtca 9632107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 563 - 669
Target Start/End: Original strand, 11234226 - 11234333
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctcctccttgat 661  Q
    ||||||||||| |||| |  |||||||| || |||||||||||| ||||| ||| | || ||||| | || ||||||||||| ||||||||||||  |||    
T  11234226 tttataagtggggacagttctcacctcataagccggttttgtggggttgtattaggcccaaccacaaattataagatggtattagagcctcctccaagat 11234325  T
Q  662 ctgttggg 669  Q
    | ||||||    
T  11234326 ccgttggg 11234333  T

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Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 563 - 637
Target Start/End: Original strand, 22377542 - 22377617
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagt-cctaccacgatttctaaga 637  Q
    ||||||||||| | ||||||||||||| |||  ||||||||||  ||| ||||||| || ||||||||||||||||    
T  22377542 tttataagtgggggcaatcatcacctcgcaagtcggttttgtgcggttatgttagtcccaaccacgatttctaaga 22377617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 577 - 639
Target Start/End: Complemental strand, 31432290 - 31432227
Alignment:
Q  577 caatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatg 639  Q
    ||||| ||||||||||| |||||||||||| |||||| || | || ||||||||||||||||||    
T  31432290 caatcctcacctcacaagccggttttgtggggttgtgctaggcccaaccacgatttctaagatg 31432227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 648
Target Start/End: Complemental strand, 32783360 - 32783269
Alignment:
Q  558 atgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggtatcagag 648  Q
    |||| |||||||| || | ||||| ||| ||||||| |  ||||| |||| || |||||| ||| |||||||||||||||||||||||||||    
T  32783360 atgtgtttataagcgggggcaatcttcatctcacaagctagttttatggaattttgttagatccaaccacgatttctaagatggtatcagag 32783269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 563 - 648
Target Start/End: Original strand, 9499256 - 9499341
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagag 648  Q
    ||||||||| | | ||||| ||||||||||| |||||||||||| |||||||| | | | |||||||||||||| ||| ||||||||    
T  9499256 tttataagtaggggcaatcttcacctcacaa-ccggttttgtggggttgtgttcgactcaaccacgatttctaaaatgatatcagag 9499341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 637
Target Start/End: Complemental strand, 26865443 - 26865357
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaaga 637  Q
    |||| ||||| ||||||||||| | |||||  |||||||||| |||||||||||| ||||| |||| | | ||||| ||||||||||    
T  26865443 ctgacaatgtatttataagtgggggcaatccccacctcacaagccggttttgtggggttgtattaggctcaaccacaatttctaaga 26865357  T

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Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 637
Target Start/End: Complemental strand, 39348204 - 39348118
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaaga 637  Q
    |||| ||||| ||||||||||||| ||||| ||| || || | |||||| ||||| ||||||||||  || ||||||||||||||||    
T  39348204 ctgacaatgtgtttataagtggaggcaatcctcaacttaccagccggttctgtggggttgtgttagacccaaccacgatttctaaga 39348118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 544 - 637
Target Start/End: Complemental strand, 42586531 - 42586438
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||||| |||| ||||| | ||||||||| | ||||| ||||||||||| ||  |||||||| ||||||||| | || ||||||||||||||||    
T  42586531 gagatggcctgacaatgtgtatataagtgggg-caatcctcacctcacaagccaattttgtggggttgtgttaggcccaaccacgatttctaaga 42586438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 4112620 - 4112539
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaaga 637  Q
    ||||| ||||||||| | | ||||||||||||||||| ||| |||| |||  ||||||||| | | ||||||||||||||||    
T  4112620 aatgtgtttataagtaggggcaatcatcacctcacaagccgattttatgggattgtgttaggcacaaccacgatttctaaga 4112539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 654
Target Start/End: Original strand, 11524827 - 11524884
Alignment:
Q  598 gttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctcct 654  Q
    ||||||||  |||||||||| || | |||| |||||||||||||||||||||||||||    
T  11524827 gttttgtgaggttgtgttaggcccatccacaatttctaagatggtatcagagcctcct 11524884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 606
Target Start/End: Original strand, 16163171 - 16163220
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtgg 606  Q
    ||||| ||||||||||| | ||||| ||||||||||| ||||||||||||    
T  16163171 aatgtgtttataagtgggggcaatcttcacctcacaatccggttttgtgg 16163220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 612
Target Start/End: Complemental strand, 28408116 - 28408067
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgt 612  Q
    ||||||||||| ||||||| | ||||||||| |||||||||||| |||||    
T  28408116 tttataagtggggacaatccttacctcacaagccggttttgtggggttgt 28408067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 544 - 617
Target Start/End: Complemental strand, 31181606 - 31181533
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||| ||||  |||| ||||||||||| | ||||| ||||||||||| | |||||| ||| ||||||||||    
T  31181606 gagatggcctgaacatgtgtttataagtgggggcaatcctcacctcacaagctggttttatggggttgtgttag 31181533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 544 - 617
Target Start/End: Original strand, 38080596 - 38080668
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||| |||| ||||| ||||||| ||| | ||||| ||||||||||| || ||||||||| ||||||||||    
T  38080596 gagatggcctgacaatgtgtttataattgggg-caatcctcacctcacaagccagttttgtggggttgtgttag 38080668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 540 - 617
Target Start/End: Original strand, 38668347 - 38668424
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||| |||||  ||| ||||| ||||||||||| | |||||||||||| ||||  |||||||||||  |||||||||    
T  38668347 atatgtgatggtttgacaatgtgtttataagtgggggcaatcatcaccttacaagtcggttttgtgggattgtgttag 38668424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 615
Target Start/End: Complemental strand, 42351939 - 42351882
Alignment:
Q  558 atgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtt 615  Q
    |||| ||||||||||||| | ||| ||||||||||| || ||||||||| ||||||||    
T  42351939 atgtgtttataagtggaggccatcctcacctcacaagccagttttgtggtgttgtgtt 42351882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 544 - 601
Target Start/End: Original strand, 42819291 - 42819348
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttt 601  Q
    ||||||| |||| ||||| ||||||||||  |||||||||||||||| ||| ||||||    
T  42819291 gagatggtctgacaatgtgtttataagtgacgacaatcatcacctcataaatcggttt 42819348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 635
Target Start/End: Original strand, 52127731 - 52127803
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaa 635  Q
    ||||||||||| | ||||| ||||||||||| | | |||||||| ||||||||| |||| ||||||||||||||    
T  52127731 tttataagtgggg-caatcctcacctcacaagctgcttttgtggggttgtgttaggtccaaccacgatttctaa 52127803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 546 - 652
Target Start/End: Original strand, 14296 - 14403
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatc 644  Q
    ||||| |||| ||||| ||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| | || |||||| ||||||||||||||||    
T  14296 gatggtctgacaatgtgtttataagtggggacaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgttttctaagatggtatc 14395  T
Q  645 agagcctc 652  Q
    ||||||||    
T  14396 agagcctc 14403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 3e-26; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 552 - 720
Target Start/End: Original strand, 2029768 - 2029936
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcc 650  Q
    |||| ||||| ||||||||||||| ||||| ||||||||||| |||||||||||| ||||| ||| | || |||||||||||||||||||||||||||||    
T  2029768 ctgacaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgttttaggcccaaccacgatttctaagatggtatcagagcc 2029867  T
Q  651 tcctccttgatctgttgggtcatctgctattgggttttcgttatcggatcgctctccatttatatccacg 720  Q
    | ||||  ||||  ||||| || |||||||| ||||| || ||||||| | | | |||||||| ||||||    
T  2029868 t-ctccaagatccattgggccacctgctattaggtttccgctatcggaccacccaccatttatgtccacg 2029936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 557 - 733
Target Start/End: Original strand, 38629845 - 38630022
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctcctc 655  Q
    ||||| ||||||||| | ||||||| ||| |||||||  |||||||||||| |||||||| || | | |||||||| |||||||||||||||||||||||    
T  38629845 aatgtatttataagttgggacaatcctcatctcacaagtcggttttgtggaattgtgttatgttcaatcacgatttttaagatggtatcagagcctcctc 38629944  T
Q  656 cttgatctgttgggtcatctgctattgggttttcgttatcggatcgctctccatttatatccacgctccagatgtcca 733  Q
    |  |||| | ||||||| || ||||| ||||| || ||||||||| | | ||||||||||||||  | ||||||||||    
T  38629945 caagatccgatgggtcaccttctattaggtttccgctatcggatcacccgccatttatatccactattcagatgtcca 38630022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 563 - 651
Target Start/End: Complemental strand, 28407867 - 28407778
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcct 651  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||||||||||||| | || ||||||||||||||||||||||||||||||    
T  28407867 tttataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagatggtatcagagcct 28407778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 547 - 697
Target Start/End: Complemental strand, 5711765 - 5711614
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| | |||||||||||| | || |||||||||||| ||||||||| | || ||||| ||||||||||| ||||||    
T  5711765 atggcctgacaatgtgtttataagtgggggcaatcatcaccttaaaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatagtatca 5711666  T
Q  646 gagcctcctccttgatctgttgggtcatctgctattgggttttcgttatcgg 697  Q
    |||||||||||  |||| |||||  || |||||||  ||||| |||||||||    
T  5711665 gagcctcctccaagatccgttggaccacctgctatcaggtttccgttatcgg 5711614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 546 - 651
Target Start/End: Complemental strand, 40379535 - 40379429
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatc 644  Q
    ||||| |||| | ||| ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || |||||||||||||||||||||||    
T  40379535 gatggcctgacagtgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatc 40379436  T
Q  645 agagcct 651  Q
    |||||||    
T  40379435 agagcct 40379429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 584 - 680
Target Start/End: Complemental strand, 21383723 - 21383626
Alignment:
Q  584 cacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctcctccttgatctgttgggtcatctgctat 680  Q
    |||||||||||||||||||||||  ||| ||||| || | ||||||||||||||||||||||||||||||||||  ||||||||||| || |||||||    
T  21383723 cacctcacaaaccggttttgtgggattgagttaggcccaaccacgatttctaagatggtatcagagcctcctccaagatctgttgggccacctgctat 21383626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 29718338 - 29718428
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcct-accacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||  | ||||| ||||||||||| |||||||||||| |||||||||| ||| ||||||||||||||| |||||||||||||||    
T  29718338 tttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagttggtatcagagcctc 29718428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 535 - 637
Target Start/End: Complemental strand, 25082639 - 25082536
Alignment:
Q  535 atcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttct 633  Q
    |||| ||| ||||||| |||| ||||| ||||||||| | | ||||||||||||||||| || ||||||||| ||||||||| |||| ||||||||||||    
T  25082639 atcagataagagatggtctgacaatgtgtttataagtaggggcaatcatcacctcacaagccagttttgtggggttgtgttaggtccaaccacgatttct 25082540  T
Q  634 aaga 637  Q
    ||||    
T  25082539 aaga 25082536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 2324250 - 2324340
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || |||||||||| ||| ||||||||||||||||    
T  2324250 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttttaatatggtatcagagcctc 2324340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 547 - 652
Target Start/End: Complemental strand, 14466500 - 14466394
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| |||||||||||   ||||| |||||| |||| |||||||||||| ||||||||| | || ||||| ||||||||||||||||||    
T  14466500 atggcctgacaatgtgtttataagtgggagcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatca 14466401  T
Q  646 gagcctc 652  Q
    |||||||    
T  14466400 gagcctc 14466394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 552 - 649
Target Start/End: Original strand, 37840336 - 37840434
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtt-agtcctaccacgatttctaagatggtatcagagc 649  Q
    |||| ||||| ||||||||||||| ||||||||||||||||| |||||||||||| ||||||||  | || ||||| |||| ||||||||||| |||||    
T  37840336 ctgacaatgtgtttataagtggaggcaatcatcacctcacaagccggttttgtggggttgtgttgggcccaaccacaatttttaagatggtattagagc 37840434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 568 - 648
Target Start/End: Original strand, 10570985 - 10571066
Alignment:
Q  568 aagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagag 648  Q
    |||||||| ||||| |||||| |||| |||||||||||| |||||||||| | | |||||||||||||||||||||||||||    
T  10570985 aagtggaggcaatcttcaccttacaagccggttttgtggggttgtgttaggctcaaccacgatttctaagatggtatcagag 10571066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 552 - 639
Target Start/End: Original strand, 2030003 - 2030091
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatg 639  Q
    |||| ||||| ||||||||||||| ||||| ||||||||||| |||||||||||| ||||| ||| | || ||||||||||||||||||    
T  2030003 ctgacaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgttttaggcccaaccacgatttctaagatg 2030091  T

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Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 552 - 733
Target Start/End: Original strand, 10523018 - 10523198
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcc 650  Q
    |||| ||||| ||||||| ||| ||||||| ||||||| ||| ||  ||||||||  ||||||||| || | ||||||||||||| ||||||| ||  ||    
T  10523018 ctgacaatgtgtttataaatggtgacaatcttcacctcgcaagccatttttgtgggattgtgttaggcccaaccacgatttctaaaatggtattag--cc 10523115  T
Q  651 tcctccttgatctgttgggtcatctgctattgggttttcgttatcggatcgctctccatttatatccacgctccagatgtcca 733  Q
    ||||||  |||||||||||||| |||||||   |||| ||||||||   | | | |||||||| |||||||| ||||||||||    
T  10523116 tcctccaagatctgttgggtcacctgctatcaagtttccgttatcgagccacccaccatttatgtccacgcttcagatgtcca 10523198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 547 - 637
Target Start/End: Original strand, 16419496 - 16419587
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||| |||| ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || ||||||||||||||||    
T  16419496 atggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 16419587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 552 - 638
Target Start/End: Complemental strand, 19544455 - 19544369
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagat 638  Q
    |||||||||| ||||||||||| | ||||| ||||||||||| |||||||||||||| | ||||| |||| |||||||||||||||||    
T  19544455 ctgataatgtgtttataagtgggggcaatc-tcacctcacaagccggttttgtggagctatgttaggtccaaccacgatttctaagat 19544369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 583 - 652
Target Start/End: Original strand, 16419297 - 16419367
Alignment:
Q  583 tcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| |||||||||||| ||||| |||| || | ||||||||||||||||||||||||||||||    
T  16419297 tcacctcacaagccggttttgtggggttgtattaggcccaaccacgatttctaagatggtatcagagcctc 16419367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 563 - 617
Target Start/End: Complemental strand, 40718281 - 40718227
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  40718281 tttataagtgagggcaatcatcacctcacaaaccggttttgtggagttgtgttag 40718227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 533 - 649
Target Start/End: Original strand, 15464749 - 15464866
Alignment:
Q  533 acatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcct-accacgattt 631  Q
    |||||| ||||||||||| |||| ||||| | | ||||||| | ||||| |||||||||||||| ||||||||| |||||||||| | | ||||||| ||    
T  15464749 acatcaaatatgagatggtctgacaatgtgtatttaagtgggggcaatcctcacctcacaaaccagttttgtggggttgtgttaggcttaaccacgactt 15464848  T
Q  632 ctaagatggtatcagagc 649  Q
     | |||||||||| ||||    
T  15464849 attagatggtatcggagc 15464866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 563 - 635
Target Start/End: Complemental strand, 19191684 - 19191611
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaa 635  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||| ||||||||| | || ||||||||||||||    
T  19191684 tttataagtggggacaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 19191611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 546 - 645
Target Start/End: Original strand, 17719393 - 17719493
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtt-agtcctaccacgatttctaagatggtatc 644  Q
    ||||| |||| ||||| ||||||||||| | ||||| ||||||||||| |||||||||| | ||||||||  | || ||||| |||||||||||||||||    
T  17719393 gatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttcggcccaaccacaatttctaagatggtatc 17719492  T
Q  645 a 645  Q
    |    
T  17719493 a 17719493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 577 - 652
Target Start/End: Original strand, 24395887 - 24395963
Alignment:
Q  577 caatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctc 652  Q
    ||||| |||||||||||| || |||||||| |||||||||| || | ||||||||||||||| ||||||||||||||    
T  24395887 caatcctcacctcacaaatcgattttgtggggttgtgttaggccaaaccacgatttctaagagggtatcagagcctc 24395963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 557 - 648
Target Start/End: Complemental strand, 36352239 - 36352147
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagag 648  Q
    ||||| ||||||||||| | |||||||||||||| || |||||||||||| ||||||||| || | ||||| |||| ||||||||||| ||||    
T  36352239 aatgtgtttataagtgggggcaatcatcacctcaaaagccggttttgtggggttgtgttaggttcaaccacaatttttaagatggtattagag 36352147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 546 - 637
Target Start/End: Complemental strand, 40379300 - 40379208
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||| |||| | ||| ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || ||||||||||||||||    
T  40379300 gatggcctgacagtgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40379208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 547 - 637
Target Start/End: Complemental strand, 5711529 - 5711438
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||| |||| ||||| ||||||||||| | ||||| |||||| |||| |||||||||||| ||||||||| | || ||||||||||||||||    
T  5711529 atggcctgacaatgtgtttataagtgggggcaatcctcacctaacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 5711438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 552 - 637
Target Start/End: Complemental strand, 5851767 - 5851680
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtgga-gttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||| ||||| ||||||||||| ||||||| ||||||||||| ||||||||||||| ||||||||| |||| ||||  ||||||||||    
T  5851767 ctgacaatgtatttataagtggggacaatcctcacctcacaagccggttttgtggaggttgtgttaggtccaaccatcatttctaaga 5851680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 563 - 697
Target Start/End: Complemental strand, 15124857 - 15124723
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctcctccttgat 661  Q
    ||||||||||  | ||||| |||| ||||||  ||||||||||| |||||||||| || | |||||||||||||||||||||||||| || ||||  |||    
T  15124857 tttataagtgagggcaatcttcacttcacaattcggttttgtggggttgtgttagacccaaccacgatttctaagatggtatcagagtct-ctccaagat 15124759  T
Q  662 ctgttgggtcatctgctattgggttttcgttatcgg 697  Q
    |  ||||  || |||||||  |||||||||||||||    
T  15124758 ccattggaccacctgctatcaggttttcgttatcgg 15124723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 563 - 637
Target Start/End: Original strand, 17719576 - 17719651
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||||||||| | ||||| | |||||||||||||||||||||| ||||||||| | || ||||||||||||||||    
T  17719576 tttataagtgggggcaatcctgacctcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaaga 17719651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 5509089 - 5509179
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| |  |||| ||||||||||| | |||||||||| ||||||||| | || |||| ||||||||| ||||||||||||||||    
T  5509089 tttataagtgggggtaatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccatgatttctaatatggtatcagagcctc 5509179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 563 - 616
Target Start/End: Original strand, 8424898 - 8424951
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta 616  Q
    ||||||||||| | |||||||||||||||||||| ||||||||| |||||||||    
T  8424898 tttataagtgggggcaatcatcacctcacaaaccagttttgtggggttgtgtta 8424951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 563 - 635
Target Start/End: Complemental strand, 40149077 - 40149004
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaa 635  Q
    ||||||||||| ||||||| ||||||||||| ||| |||||||| ||||||||| |||| |||| |||||||||    
T  40149077 tttataagtggggacaatcctcacctcacaagccgattttgtggggttgtgttaggtccaaccatgatttctaa 40149004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 540 - 617
Target Start/End: Complemental strand, 42639711 - 42639634
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    |||||| |||| |||| ||||| ||||||| ||| ||||||| ||||||||||| | |||||||||| ||||||||||    
T  42639711 atatgacatggtctgacaatgtgtttataaatggggacaatcgtcacctcacaagctggttttgtggggttgtgttag 42639634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 652
Target Start/End: Original strand, 32356390 - 32356485
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||| ||||||||||| | ||||| ||||| ||||| || ||||||||||||||||||| | || || |||| ||||||| |||||||||||||||    
T  32356390 aatgtgtttataagtgggggcaatcctcacc-cacaagccagttttgtggagttgtgttaggcccaactacgaattctaagttggtatcagagcctc 32356485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 544 - 635
Target Start/End: Complemental strand, 33606147 - 33606056
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaa 635  Q
    ||||||| |||| ||||| ||||||||| | | ||||| ||||||||||||||||||||||||| || ||||||  || ||||||||||||||    
T  33606147 gagatggcctgaaaatgtgtttataagtaggggcaatcctcacctcacaaaccggttttgtggaatt-tgttagacccaaccacgatttctaa 33606056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 617
Target Start/End: Original strand, 2324484 - 2324538
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||||    
T  2324484 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 2324538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 810 - 867
Target Start/End: Original strand, 13486359 - 13486417
Alignment:
Q  810 aatcctcacctcacagactgattttgtagggttgtgttagacgt-accacgatttctaa 867  Q
    ||||||||||||||| ||||||||||| |||||||||||| | | ||||||||||||||    
T  13486359 aatcctcacctcacaaactgattttgtggggttgtgttaggcctaaccacgatttctaa 13486417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 648
Target Start/End: Complemental strand, 17855003 - 17854917
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggtatcagag 648  Q
    ||||||||||  | ||||| ||||||||||| |||||||||||| |||||| |||  || |||||||||||||| ||| ||||||||    
T  17855003 tttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgctagacccaaccacgatttctaatatgatatcagag 17854917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 617
Target Start/End: Original strand, 32884117 - 32884171
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||||    
T  32884117 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 32884171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 680
Target Start/End: Original strand, 14927101 - 14927230
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagcc 650  Q
    |||| ||||| ||||||||||| | ||||| |||||||| ||  | | ||||||  |||||||||| | | |||||||||||||||||   |||||||||    
T  14927101 ctgacaatgtgtttataagtgggggcaatcctcacctcataagtcagctttgtgtggttgtgttaggctcaaccacgatttctaagataacatcagagcc 14927200  T
Q  651 tcctccttgatctgttgggtcatctgctat 680  Q
    |||| | ||||| |||||| || |||||||    
T  14927201 tccttcatgatccgttgggacacctgctat 14927230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 557 - 645
Target Start/End: Complemental strand, 33606369 - 33606280
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatca 645  Q
    ||||| ||||||||||| |  |||| ||||||||||| || ||||||||| ||| |||||| | | |||||||||||||||||| |||||    
T  33606369 aatgtgtttataagtgggggtaatcctcacctcacaagccagttttgtggcgttatgttaggcacaaccacgatttctaagatgatatca 33606280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 597 - 652
Target Start/End: Complemental strand, 93394 - 93338
Alignment:
Q  597 ggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctc 652  Q
    |||||||||| |||||||||| || | ||||||||| ||||||||||||||||||||    
T  93394 ggttttgtggggttgtgttaggcccaaccacgatttttaagatggtatcagagcctc 93338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 546 - 637
Target Start/End: Original strand, 11020551 - 11020643
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||| |||| ||||| ||||||||||||| ||||| ||||||||||| ||| ||| ||||  |||||||| |||| | | ||||||||||||    
T  11020551 gatggtctgaaaatgtgtttataagtggaggcaatcctcacctcacaagccgatttagtgggattgtgttaggtccaatcgcgatttctaaga 11020643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 17525433 - 17525369
Alignment:
Q  542 atgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtgg 606  Q
    |||| |||| |||| ||||| ||||||||||| | ||||| ||||||||||| ||||||||||||    
T  17525433 atgacatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtgg 17525369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 629 - 697
Target Start/End: Original strand, 19110319 - 19110387
Alignment:
Q  629 tttctaagatggtatcagagcctcctccttgatctgttgggtcatctgctattgggttttcgttatcgg 697  Q
    ||||||||||||||||| ||||| ||||  |||| ||||||||| |||||||| |||||| | ||||||    
T  19110319 tttctaagatggtatcaaagcctactccaagatccgttgggtcacctgctattaggtttttgctatcgg 19110387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 30063346 - 30063266
Alignment:
Q  558 atgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgt-tagtcctaccacgatttctaaga 637  Q
    |||| ||||||||||| || |||||||||| ||||| |||||||||||  ||||||| | | || ||||||||||||||||    
T  30063346 atgtgtttataagtggggataatcatcaccacacaagccggttttgtgaggttgtgtatggcccaaccacgatttctaaga 30063266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 597 - 647
Target Start/End: Complemental strand, 93667 - 93616
Alignment:
Q  597 ggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcaga 647  Q
    |||||||||| |||||||||| || | |||||||||||||||||||||||||    
T  93667 ggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcaga 93616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 577 - 635
Target Start/End: Original strand, 13486358 - 13486417
Alignment:
Q  577 caatcatcacctcacaaaccggttttgtggagttgtgttagtcct-accacgatttctaa 635  Q
    ||||| ||||||||||||| | |||||||| |||||||||| ||| ||||||||||||||    
T  13486358 caatcctcacctcacaaactgattttgtggggttgtgttaggcctaaccacgatttctaa 13486417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 617
Target Start/End: Original strand, 15460979 - 15461038
Alignment:
Q  558 atgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    |||| |||||| |||||| |||||||||||||||||  | ||||||||| ||||||||||    
T  15460979 atgtgtttataggtggagccaatcatcacctcacaagacagttttgtggggttgtgttag 15461038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 617
Target Start/End: Original strand, 16533540 - 16533611
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||| |||| ||||| ||||||||||| | ||||| |||| |||||| |||||||||||  ||||||||||    
T  16533540 gatggcctgacaatgtgtttataagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttag 16533611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 533 - 604
Target Start/End: Complemental strand, 18607113 - 18607042
Alignment:
Q  533 acatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgt 604  Q
    |||||| ||| | ||||| |||| ||||| ||||| ||||| |||||||||||||||| || ||||||||||    
T  18607113 acatcagataggtgatggcctgacaatgtgtttattagtggggacaatcatcacctcaaaagccggttttgt 18607042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 645
Target Start/End: Complemental strand, 27897660 - 27897597
Alignment:
Q  583 tcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatca 645  Q
    |||||||||||  ||||||||||| ||||||||| | || ||||| ||||||||||||||||||    
T  27897660 tcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatca 27897597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 635
Target Start/End: Original strand, 31222521 - 31222604
Alignment:
Q  553 tgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaa 635  Q
    ||||||| | ||||||||||||| ||||| ||||| || |||||| |||||| | ||||||||| | || ||||||||||||||    
T  31222521 tgataatttatttataagtggaggcaatcctcaccccataaaccgattttgtagggttgtgttaggaccaaccacgatttctaa 31222604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 638
Target Start/End: Original strand, 9927903 - 9927997
Alignment:
Q  545 agatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagat 638  Q
    |||||| |||| ||||| ||||||||||| |  |||| ||||||||||| | | |||| ||| ||||||||| |||| ||||||| |||||||||    
T  9927903 agatggtctgacaatgtgtttataagtgggggtaatcctcacctcacaagctgattttttggggttgtgttacgtccaaccacgaattctaagat 9927997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 32356605 - 32356678
Alignment:
Q  542 atgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta 616  Q
    |||||||| ||||||||| | |||||| |||| ||||||| |||| |||||| | ||||||||||| ||||||||    
T  32356605 atgagatgaactgataatatatttataggtgg-gacaatcctcacgtcacaagctggttttgtggaattgtgtta 32356678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 563 - 617
Target Start/End: Complemental strand, 37770017 - 37769963
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||| | ||||| |||||||| || |||||||||||| ||||||||||    
T  37770017 tttataagtgggggcaatcttcacctcataagccggttttgtggggttgtgttag 37769963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 42895630 - 42895680
Alignment:
Q  706 ccatttatatccacgctccagatgtccagtccaaggcaagagaggttgtgt 756  Q
    |||||||||||||||||||||||||||| ||| ||||| ||| || |||||    
T  42895630 ccatttatatccacgctccagatgtccaatcctaggcatgagggggtgtgt 42895680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 602
Target Start/End: Original strand, 3738933 - 3738982
Alignment:
Q  553 tgataatgtttttataagtggagacaatcatcacctcacaaaccggtttt 602  Q
    ||||||||| ||||||||||| | ||||| |||| |||||||||||||||    
T  3738933 tgataatgtgtttataagtgggggcaatcctcacatcacaaaccggtttt 3738982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 631
Target Start/End: Original strand, 5509323 - 5509392
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgattt 631  Q
    ||||||||||| | ||||| ||||| ||||| |||||||||||| || |||||| |||| ||||||||||    
T  5509323 tttataagtgggggcaatcctcaccccacaagccggttttgtggggtagtgttaggtccaaccacgattt 5509392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 565 - 602
Target Start/End: Original strand, 15451601 - 15451638
Alignment:
Q  565 tataagtggagacaatcatcacctcacaaaccggtttt 602  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  15451601 tataagtggagacaatcatcacctctcaaaccagtttt 15451638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 635
Target Start/End: Complemental strand, 17854766 - 17854693
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaa 635  Q
    ||||||||||| | ||||||||| |||||||  |||||||||||  |||||||| | || ||||||||||||||    
T  17854766 tttataagtgggggcaatcatcatctcacaagtcggttttgtgggattgtgttaggcccaaccacgatttctaa 17854693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 654
Target Start/End: Complemental strand, 33381230 - 33381173
Alignment:
Q  598 gttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctcct 654  Q
    ||||||||  ||||||||||||| | ||||||||||||||||||||| |||| |||||    
T  33381230 gttttgtgaggttgtgttagtcccaaccacgatttctaagatggtattagagtctcct 33381173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 574 - 639
Target Start/End: Original strand, 34515683 - 34515748
Alignment:
Q  574 agacaatcatcacctcacaaaccggttttgtggagttgtgttagtcctaccacgatttctaagatg 639  Q
    |||||||||| ||||||||||||  |||| | |  ||||||||| || ||||||||||||||||||    
T  34515683 agacaatcattacctcacaaaccaattttataggattgtgttagacccaccacgatttctaagatg 34515748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 4e-25; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 544 - 650
Target Start/End: Complemental strand, 24532514 - 24532407
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggta 642  Q
    ||||||| |||| ||||| ||||||||||| | ||||||||||||||||| |||||||||||| ||||||||| | || |||| ||||||||||||||||    
T  24532514 gagatggcctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggta 24532415  T
Q  643 tcagagcc 650  Q
    ||||||||    
T  24532414 tcagagcc 24532407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 552 - 652
Target Start/End: Original strand, 8084126 - 8084227
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggtatcagagcc 650  Q
    |||| ||||| ||||||||||| | ||||| ||||||||||| | ||||||| |||||||||||||  || |||||||||||||||||||||||||||||    
T  8084126 ctgacaatgtatttataagtgggggcaatcctcacctcacaagctggttttgcggagttgtgttagacccaaccacgatttctaagatggtatcagagcc 8084225  T
Q  651 tc 652  Q
    ||    
T  8084226 tc 8084227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 552 - 652
Target Start/End: Original strand, 41790658 - 41790758
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcc 650  Q
    |||| ||||| ||||||||||| ||||||| |||||||| || |||||||||||| ||||||||| | || |||||||||||||||||||||||||||||    
T  41790658 ctgacaatgtgtttataagtggggacaatcctcacctcataagccggttttgtgg-gttgtgttaggcccaaccacgatttctaagatggtatcagagcc 41790756  T
Q  651 tc 652  Q
    ||    
T  41790757 tc 41790758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 546 - 652
Target Start/End: Complemental strand, 39053020 - 39052913
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatc 644  Q
    ||||| |||| ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || || |||||||||||||||||||     
T  39053020 gatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacaacgatttctaagatggtatt 39052921  T
Q  645 agagcctc 652  Q
    ||||||||    
T  39052920 agagcctc 39052913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 4828078 - 4828168
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||| ||||||||| | || |||||||| ||||| ||||||||||||||||    
T  4828078 tttataagtggggacaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatctctaatatggtatcagagcctc 4828168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 547 - 652
Target Start/End: Complemental strand, 11232284 - 11232178
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| | ||||| |||||| |||| |||||||||||| ||||||||| | || ||||| ||||||||||||||||||    
T  11232284 atggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatca 11232185  T
Q  646 gagcctc 652  Q
    |||||||    
T  11232184 gagcctc 11232178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 547 - 652
Target Start/End: Complemental strand, 11232519 - 11232413
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| | ||||| |||||| |||| |||||||||||| ||||||||| | || ||||| ||||||||||||||||||    
T  11232519 atggtctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatca 11232420  T
Q  646 gagcctc 652  Q
    |||||||    
T  11232419 gagcctc 11232413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 17469828 - 17469918
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| |||||||||| | | |||||||||||||| ||||||||||||||||    
T  17469828 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaatatggtatcagagcctc 17469918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 37001236 - 37001326
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    |||||| |||| | ||||| ||||||||||| |||||||||||||||||||||| | || ||||||||||| |||||||||||||||||||    
T  37001236 tttataggtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttcaaagatggtatcagagcctc 37001326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 540 - 652
Target Start/End: Original strand, 20301248 - 20301361
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagat 638  Q
    |||||||||||  ||| ||||| ||||||||||| | ||||| | ||||||||| || ||||||||  |||||||||| || | ||||||||||||||||    
T  20301248 atatgagatggcttgacaatgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatttctaagat 20301347  T
Q  639 ggtatcagagcctc 652  Q
    ||||||||||||||    
T  20301348 ggtatcagagcctc 20301361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 540 - 652
Target Start/End: Original strand, 21087880 - 21087993
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagat 638  Q
    |||||||||||  ||| ||||| ||||||||||| | ||||| | ||||||||| || ||||||||  |||||||||| || | ||||||||||||||||    
T  21087880 atatgagatggcttgacaatgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatttctaagat 21087979  T
Q  639 ggtatcagagcctc 652  Q
    ||||||||||||||    
T  21087980 ggtatcagagcctc 21087993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 540 - 696
Target Start/End: Complemental strand, 28213200 - 28213044
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagat 638  Q
    ||||||||||| |||| ||||| ||||||||||  | ||||| ||||||||||| ||  ||| | || |||||||||| || | ||||||||||||| ||    
T  28213200 atatgagatggtctgacaatgtgtttataagtgcgg-caatcctcacctcacaagccaatttggcggggttgtgttaggcccaaccacgatttctaatat 28213102  T
Q  639 ggtatcagagcctcctccttgatctgttgggtcatctgctattgggttttcgttatcg 696  Q
    ||||||||| ||||||||  ||||||||||| || |||||||  ||||||| ||||||    
T  28213101 ggtatcagatcctcctccaagatctgttgggccacctgctatcaggttttcattatcg 28213044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 540 - 635
Target Start/End: Complemental strand, 28069454 - 28069358
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaa 635  Q
    |||||| |||| |||| ||||| ||||||||||| | ||||| ||||||||||||| | ||||||||||||||||||| ||| ||||||||||||||    
T  28069454 atatgacatggcctgacaatgtatttataagtgggggcaatcctcacctcacaaactgattttgtggagttgtgttagatccaaccacgatttctaa 28069358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 563 - 652
Target Start/End: Complemental strand, 19256894 - 19256804
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||| ||||||||||| | |||||||||| ||||||||| | || |||||||||||||| ||||||||||||||||    
T  19256894 tttataagtgggggcaatcctcacctcacaagcaggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctc 19256804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 557 - 652
Target Start/End: Complemental strand, 15042966 - 15042870
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcct-accacgatttctaagatggtatcagagcctc 652  Q
    ||||| ||||||||||| | ||||| | |||||  ||||||||||||||| |||||||||| ||| |||||||||||||||||| ||||| ||||||    
T  15042966 aatgtgtttataagtgggggcaatccttacctcgtaaaccggttttgtggggttgtgttaggcctaaccacgatttctaagatgttatcatagcctc 15042870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 552 - 649
Target Start/End: Original strand, 10884063 - 10884161
Alignment:
Q  552 ctgataatgtttttataagtggaga-caatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagc 649  Q
    |||| ||||| ||||||||||| |  ||||| ||||||||||| |||||||||||| |||||||||| || | |||||||||||||||||||||||||||    
T  10884063 ctgacaatgtgtttataagtggggggcaatcctcacctcacaagccggttttgtgg-gttgtgttaggcccaaccacgatttctaagatggtatcagagc 10884161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 547 - 637
Target Start/End: Complemental strand, 15042760 - 15042669
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaaga 637  Q
    |||| |||| ||||| ||||||||||| | ||||||||||||| ||||||| |||||||| |||||||||| | | ||||||||||||||||    
T  15042760 atggcctgacaatgtgtttataagtgggggcaatcatcacctcgcaaaccgattttgtggggttgtgttaggctcaaccacgatttctaaga 15042669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 558 - 655
Target Start/End: Complemental strand, 42049766 - 42049668
Alignment:
Q  558 atgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctcctc 655  Q
    |||| ||||||||||| | ||||| ||||| ||||| |||||||||||  |||||| ||| |||| |||||||||||||||||| |||||| |||||||    
T  42049766 atgtgtttataagtgggggcaatcctcaccccacaagccggttttgtgaggttgtggtaggcctaaccacgatttctaagatggcatcagaacctcctc 42049668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 552 - 652
Target Start/End: Original strand, 12688071 - 12688172
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagcc 650  Q
    |||||||||| ||||||||||  | |||||  |||||||||| |||||||||||||||| |||||| | | | |||||||||||||||| ||| ||||||    
T  12688071 ctgataatgtgtttataagtgagggcaatccccacctcacaagccggttttgtggagttatgttagactcaaacacgatttctaagatgatattagagcc 12688170  T
Q  651 tc 652  Q
    ||    
T  12688171 tc 12688172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 552 - 652
Target Start/End: Original strand, 16050028 - 16050129
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggtatcagagcc 650  Q
    |||||||| | |||||||||| || ||||| |||||||||||  | ||||||||| ||||||||||  || ||||||| |||||| ||||||||||||||    
T  16050028 ctgataatttgtttataagtgaaggcaatcctcacctcacaagtcagttttgtggggttgtgttagacccaaccacgacttctaatatggtatcagagcc 16050127  T
Q  651 tc 652  Q
    ||    
T  16050128 tc 16050129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 544 - 617
Target Start/End: Complemental strand, 38447520 - 38447447
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||| |||| ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||||    
T  38447520 gagatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 38447447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 557 - 652
Target Start/End: Complemental strand, 5932264 - 5932168
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||| ||||||||||| | ||| | ||||||||||| || ||||||||| ||||||||| | || ||||| |||| ||||||||||||||||||||    
T  5932264 aatgtgtttataagtgggggcaagcctcacctcacaagcctgttttgtggggttgtgttaggcccaaccaccatttttaagatggtatcagagcctc 5932168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 563 - 638
Target Start/End: Original strand, 37001474 - 37001550
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagat 638  Q
    ||||||||||| ||||||| |||| |||||| |||||||||||| ||||||||| | || |||||||||||||||||    
T  37001474 tttataagtggggacaatcctcacatcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 37001550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 577 - 652
Target Start/End: Complemental strand, 37868643 - 37868567
Alignment:
Q  577 caatcatcacctcacaaaccggttttgtggagttgtgttagtcct-accacgatttctaagatggtatcagagcctc 652  Q
    ||||| ||||||||||| | ||||||||||| ||||||||| ||| |||||||||| ||||||||||||| ||||||    
T  37868643 caatcctcacctcacaagctggttttgtggaattgtgttaggcctaaccacgatttttaagatggtatcatagcctc 37868567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 547 - 637
Target Start/End: Complemental strand, 35682871 - 35682780
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||| |||| ||||| ||||||||||| | ||||| ||||||| ||| |||||||||||| ||||||||| | || ||||||||||||||||    
T  35682871 atggcctgacaatgtgtttataagtgggggcaatcctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35682780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 547 - 648
Target Start/End: Original strand, 12317040 - 12317142
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| | ||||| |||||||| || | | ||||||||  ||||||||| || | |||||||||||||||||||||||    
T  12317040 atggtctgacaatgtgtttataagtgggggcaatcctcacctcataagctgattttgtgggattgtgttaggcccaaccacgatttctaagatggtatca 12317139  T
Q  646 gag 648  Q
    |||    
T  12317140 gag 12317142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 563 - 648
Target Start/End: Complemental strand, 16962320 - 16962234
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagag 648  Q
    |||||||||||  |||||  ||||||||||||||||||||||||  |||||||| |||| ||||| |||| |||||| |||||||||    
T  16962320 tttataagtgggaacaattctcacctcacaaaccggttttgtgggattgtgttaggtccaaccacaatttttaagattgtatcagag 16962234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 34842688 - 34842778
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||| |||||||| |   ||||||||||| |||||||||| | | |||||||||||||| ||||||||||||||||    
T  34842688 tttataagtgggggcaatcctcacctcataggtcggttttgtggggttgtgttaggctcaaccacgatttctaatatggtatcagagcctc 34842778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 540 - 617
Target Start/End: Original strand, 8929004 - 8929081
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||| |||| ||||| ||||||| ||| | |||||  |||||||||| |||||||||||| ||||||||||    
T  8929004 atatgagatggcctgacaatgtgtttataactgggggcaatccgcacctcacaagccggttttgtggggttgtgttag 8929081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 563 - 635
Target Start/End: Original strand, 17477075 - 17477148
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaa 635  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| |||||||||| | | ||||||||||||||    
T  17477075 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaa 17477148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 563 - 635
Target Start/End: Complemental strand, 19256660 - 19256587
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaa 635  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || ||||||||||||||    
T  19256660 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 19256587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 563 - 635
Target Start/End: Complemental strand, 24075380 - 24075307
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaa 635  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || ||||||||||||||    
T  24075380 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 24075307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 544 - 635
Target Start/End: Complemental strand, 422310 - 422218
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcc-taccacgatttctaa 635  Q
    ||||||| |||| ||||| |||| |||||||| ||||| ||||||||||| || ||||||||| ||| |||||| ||  ||||||||||||||    
T  422310 gagatggtctgacaatgtgtttaaaagtggaggcaatcctcacctcacaagccagttttgtggggttatgttaggccaaaccacgatttctaa 422218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 544 - 647
Target Start/End: Complemental strand, 5590461 - 5590357
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggta 642  Q
    ||||||| |||| ||||| |||| |||||| | ||||| |||| |||||| |||||||||||  ||||||||| | || ||||| |||||||| ||||||    
T  5590461 gagatggtctgacaatgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggcccaaccacaatttctaaaatggta 5590362  T
Q  643 tcaga 647  Q
    |||||    
T  5590361 tcaga 5590357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 544 - 651
Target Start/End: Original strand, 8716105 - 8716213
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggta 642  Q
    ||||||| || | ||||| |||| ||||| || ||||| |||||||| || ||| |||||||| |||||||||| || | ||| ||||||||| ||||||    
T  8716105 gagatggtctcacaatgtgtttaaaagtgaaggcaatcctcacctcataagccgattttgtggggttgtgttagacccaaccaagatttctaatatggta 8716204  T
Q  643 tcagagcct 651  Q
    |||||||||    
T  8716205 tcagagcct 8716213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 545 - 617
Target Start/End: Complemental strand, 29099832 - 29099760
Alignment:
Q  545 agatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    |||||| |||| ||||| ||||||||||||| ||||| ||||||||||||| | |||||||| || |||||||    
T  29099832 agatggtctgacaatgtgtttataagtggaggcaatcttcacctcacaaactgattttgtggggtagtgttag 29099760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 563 - 637
Target Start/End: Complemental strand, 42846680 - 42846604
Alignment:
Q  563 tttataagtggaga-caatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||||||||||||  ||||| ||||||||||| |||||||||||| ||||||||| | || ||||||||||||||||    
T  42846680 tttataagtggagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 42846604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 546 - 617
Target Start/End: Complemental strand, 5675825 - 5675754
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||| |||| ||||| ||||||||| ||||||||  ||||||||||| | | |||||||||||||||||||    
T  5675825 gatggtctgacaatgtgtttataagtagagacaattctcacctcacaagctgattttgtggagttgtgttag 5675754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 533 - 604
Target Start/End: Original strand, 7729921 - 7729992
Alignment:
Q  533 acatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgt 604  Q
    |||||| ||||||||||| ||||  |||| ||||||||||| | ||||| ||||||||||| ||||||||||    
T  7729921 acatcagatatgagatggcctgaccatgtgtttataagtgggggcaatcctcacctcacaagccggttttgt 7729992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 544 - 637
Target Start/End: Original strand, 39960182 - 39960277
Alignment:
Q  544 gagatggactgataatgtttttataagtggaga-caatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||||| |||| ||| | ||||||||||| |  ||||| ||||||||||| |||||||||||| ||||||||| | || ||||||||||||||||    
T  39960182 gagatggcctgaaaatttgtttataagtggggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 39960277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 617
Target Start/End: Original strand, 4828303 - 4828357
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||||    
T  4828303 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 4828357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 617
Target Start/End: Complemental strand, 5932039 - 5931969
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    |||| |||| ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| ||| ||||||    
T  5932039 atggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttag 5931969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 617
Target Start/End: Complemental strand, 7267539 - 7267485
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||| | ||||||||||||||||| |||||||||| | ||||||||||    
T  7267539 tttataagtgggggcaatcatcacctcacaagccggttttgtagggttgtgttag 7267485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 564 - 637
Target Start/End: Original strand, 27204975 - 27205049
Alignment:
Q  564 ttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||||||||| | ||||| |||||||| || |||||||||||| ||||||||| | || ||||||||||||||||    
T  27204975 ttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 564 - 637
Target Start/End: Original strand, 27205073 - 27205147
Alignment:
Q  564 ttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||||||||| | ||||| |||||||| || |||||||||||| ||||||||| | || ||||||||||||||||    
T  27205073 ttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 564 - 637
Target Start/End: Original strand, 27205171 - 27205245
Alignment:
Q  564 ttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||||||||| | ||||| |||||||| || |||||||||||| ||||||||| | || ||||||||||||||||    
T  27205171 ttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 652
Target Start/End: Complemental strand, 36917529 - 36917423
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| |  |||| |||| ||||||  | ||||||||| |||||||||  | | ||||| ||||||||||||||||||    
T  36917529 atggcctgacaatgtatttataagtgggggtaatcctcacatcacaagtcagttttgtggggttgtgttaagcacaaccaccatttctaagatggtatca 36917430  T
Q  646 gagcctc 652  Q
    |||||||    
T  36917429 gagcctc 36917423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 651
Target Start/End: Complemental strand, 422527 - 422438
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcct 651  Q
    |||||||||| |  ||||||||| |||| || ||| |||||||| |||||||| | || | |||| ||||||||||||||||||||||||    
T  422527 tttataagtgtatgcaatcatcagctcataagccgattttgtggggttgtgtttggcccaaccacaatttctaagatggtatcagagcct 422438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 557 - 652
Target Start/End: Complemental strand, 3157640 - 3157543
Alignment:
Q  557 aatgtttttataagtggaga-caatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||| ||||||||||| |  ||||| ||||||||||| || ||||||||| |||||||||| | | ||||| |||| ||||||| ||||||||||||    
T  3157640 aatgtatttataagtggggggcaatcctcacctcacaagccagttttgtggggttgtgttaggctcaaccaccatttataagatgatatcagagcctc 3157543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 8084366 - 8084447
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||| ||||||||||| |  || | |||||||||||||| ||||||||  ||||||||| |||| ||||||||||||||||    
T  8084366 aatgtatttataagtgggggtaaacctcacctcacaaaccagttttgtgaggttgtgttaggtccaaccacgatttctaaga 8084447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 643
Target Start/End: Original strand, 38475757 - 38475838
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtat 643  Q
    ||||||||||| | ||||| ||||||||||| |||||||||| | ||||||||| | || ||||| | ||||||||||||||    
T  38475757 tttataagtgggggcaatcctcacctcacaagccggttttgtagggttgtgttaggcccaaccacaaattctaagatggtat 38475838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 552 - 651
Target Start/End: Complemental strand, 26800597 - 26800497
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcc 650  Q
    |||||||| | | ||||||||| | ||||| ||||| ||||| |||||||||||| ||||||||| | || ||||| |||||||  ||||||| ||||||    
T  26800597 ctgataatttgtctataagtgggggcaatcctcaccacacaagccggttttgtggggttgtgttaggcccaaccacaatttctattatggtattagagcc 26800498  T
Q  651 t 651  Q
    |    
T  26800497 t 26800497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 589 - 656
Target Start/End: Original strand, 38476074 - 38476142
Alignment:
Q  589 cacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctcctcc 656  Q
    ||||| ||||||||||||  || |||||| || | |||| |||||||||||||||||||||||||||||    
T  38476074 cacaagccggttttgtgggattatgttaggcccaaccacaatttctaagatggtatcagagcctcctcc 38476142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 735
Target Start/End: Original strand, 6462963 - 6463141
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctcctc 655  Q
    ||||| ||||||||||||| ||| | || | | |||||| |||||||||  ||||||||| | || ||||| |||| ||||||| ||||||| |||||||    
T  6462963 aatgtgtttataagtggaggcaacc-tcgcttaacaaacaggttttgtgcggttgtgttatgcccaaccacaatttttaagatgatatcagaacctcctc 6463061  T
Q  656 cttgatctgttgggtcatctgctattgggttttcgttatcggatcgctctccatttatatccacgctccagatgtccagt 735  Q
    |  ||||| ||| | || || ||||| | |||||| |||| | || |||  ||||||||||||  ||| |||||||||||    
T  6463062 caagatcttttgtgccaccttctattagtttttcgctatcaggtcactcatcatttatatccatactctagatgtccagt 6463141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 563 - 645
Target Start/End: Complemental strand, 8466798 - 8466715
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggtatca 645  Q
    ||||||||||| ||||||| ||||||||||| | |||||| ||| |||||||  |  || ||||| ||||||||||||||||||    
T  8466798 tttataagtggggacaatcctcacctcacaagctggttttatggggttgtgtacgacccaaccacaatttctaagatggtatca 8466715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 563 - 637
Target Start/End: Original strand, 12547109 - 12547183
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || || |||||||||||||    
T  12547109 tttataagtgggg-caatcttcacctcacaagccggttttgtggggttgtgttaggcccaactacgatttctaaga 12547183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 638
Target Start/End: Original strand, 12688306 - 12688393
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagat 638  Q
    |||| ||||| ||||||||||| | ||||| | ||||||||| || ||||||||| |||||| || |||| |||| ||||||||||||    
T  12688306 ctgacaatgtgtttataagtgggggcaatccttacctcacaagccagttttgtggggttgtgataggtccaaccatgatttctaagat 12688393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 563 - 637
Target Start/End: Complemental strand, 22638253 - 22638178
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtt-agtcctaccacgatttctaaga 637  Q
    ||||||||| | | ||||| ||||| ||||| |||||||||||| |||||||| || || ||||||||||||||||    
T  22638253 tttataagtaggggcaatcctcaccacacaagccggttttgtggggttgtgttaagcccaaccacgatttctaaga 22638178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 26208323 - 26208196
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggtatcagagcctcctccttgat 661  Q
    ||||||||||| | |||||  ||| ||| || || ||||| ||| |||||||||| |||  |||| |||||||||||||||||||||||| |||   |||    
T  26208323 tttataagtgggggcaatctccacatcataagccagttttatggggttgtgttaggtccatccacaatttctaagatggtatcagagccttctctaagat 26208224  T
Q  662 ctgttgggtcatctgctattgggttttc 689  Q
    | |||||| || |||||||  |||||||    
T  26208223 ccgttgggccacctgctatcaggttttc 26208196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 785 - 867
Target Start/End: Complemental strand, 28069441 - 28069358
Alignment:
Q  785 tgacaatgtatttataactaacagaaatcctcacctcacagactgattttgtagggttgtgttaga-cgtaccacgatttctaa 867  Q
    ||||||||||||||||| |    | ||||||||||||||| ||||||||||| | ||||||||||| |  ||||||||||||||    
T  28069441 tgacaatgtatttataagtgggggcaatcctcacctcacaaactgattttgtggagttgtgttagatccaaccacgatttctaa 28069358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 563 - 617
Target Start/End: Original strand, 34843127 - 34843181
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    |||||||||||   ||||| ||||||||||| |||||||||||| ||||||||||    
T  34843127 tttataagtgggagcaatcctcacctcacaagccggttttgtggggttgtgttag 34843181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 648
Target Start/End: Complemental strand, 20094868 - 20094783
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcctaccacgatttctaagatggtatcagag 648  Q
    |||||| |||| | ||||| |||||| |||| |||||||||||| ||||| |  | || |||||||||| |||| |||||||||||    
T  20094868 tttatatgtgggggcaatcctcaccttacaagccggttttgtggggttgtttaggcccaaccacgatttataagttggtatcagag 20094783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 25325650 - 25325731
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||| |||||||||||   ||||| || |||||||| || ||||||||||||||| ||| | || ||||||||||||||||    
T  25325650 aatgtgtttataagtgggtgcaatcctctcctcacaagccagttttgtggagttgttttaggcccaaccacgatttctaaga 25325731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 608
Target Start/End: Complemental strand, 30201598 - 30201553
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggag 608  Q
    ||||||||||| | ||||| ||||||||||| ||||||||||||||    
T  30201598 tttataagtggggtcaatcttcacctcacaagccggttttgtggag 30201553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 652
Target Start/End: Original strand, 31197645 - 31197714
Alignment:
Q  583 tcacctcacaaaccggttttgtggagttgtgttagtcctaccacgatttctaagatggtatcagagcctc 652  Q
    |||||||| ||  ||||||||| | |||||||||| || | |  ||||||||||||||||||||||||||    
T  31197645 tcacctcaaaagtcggttttgtagggttgtgttaggcccaaccagatttctaagatggtatcagagcctc 31197714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 635
Target Start/End: Original strand, 39743539 - 39743612
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaa 635  Q
    ||||||||| | | ||||| ||||||||||| ||| |||||||| ||||||||| | || ||||||||||||||    
T  39743539 tttataagttggggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttctaa 39743612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 616
Target Start/End: Original strand, 39984824 - 39984877
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta 616  Q
    ||||||||||| | ||||| ||||||||||| || ||||||||| |||||||||    
T  39984824 tttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgtta 39984877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 2e-24; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 555 - 652
Target Start/End: Complemental strand, 33996393 - 33996295
Alignment:
Q  555 ataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||| ||||||||||| | ||||| |||||||||||  ||||||||||||||||||||| | || |||||||||||||||||||||||||||||||    
T  33996393 ataatgtatttataagtgggggcaatcttcacctcacaagtcggttttgtggagttgtgttaggcccaaccacgatttctaagatggtatcagagcctc 33996295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 552 - 652
Target Start/End: Original strand, 25620135 - 25620236
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcc 650  Q
    |||| ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || |||||||||||||||||||||||||||||    
T  25620135 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcc 25620234  T
Q  651 tc 652  Q
    ||    
T  25620235 tc 25620236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 547 - 695
Target Start/End: Complemental strand, 26240006 - 26239857
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| | ||||| |||||||||||  |||| |||||| |||||||||| || | |||| ||||||||||||||||||    
T  26240006 atggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagtcggtattgtggggttgtgttagacccaaccacaatttctaagatggtatca 26239907  T
Q  646 gagcctcctccttgatctgttgggtcatctgctattgggttttcgttatc 695  Q
    |||||||||||  |||| |||||| || |||||||  ||||| |||||||    
T  26239906 gagcctcctccaagatccgttgggccacctgctatcaggtttccgttatc 26239857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 546 - 650
Target Start/End: Complemental strand, 31485750 - 31485645
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcct-accacgatttctaagatggtatc 644  Q
    ||||| |||| ||||||||||||||||| | ||||| |||||| |||| ||||||||||| ||||||||||| ||| ||||| ||||||||||||||||     
T  31485750 gatggcctgacaatgtttttataagtgggggcaatcctcacctgacaagccggttttgtgaagttgtgttaggcctaaccacaatttctaagatggtata 31485651  T
Q  645 agagcc 650  Q
    ||||||    
T  31485650 agagcc 31485645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 533 - 652
Target Start/End: Original strand, 21821786 - 21821906
Alignment:
Q  533 acatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgattt 631  Q
    |||||| ||||||||||| |||| ||| | || |||||||| | ||||| ||| ||||||||||| ||||||||  |||||||| | || ||||||||||    
T  21821786 acatcagatatgagatggcctgacaatatgttaataagtgggggcaatcttcatctcacaaaccgattttgtgggattgtgttaggcccaaccacgattt 21821885  T
Q  632 ctaagatggtatcagagcctc 652  Q
    |||||||||||||||||||||    
T  21821886 ctaagatggtatcagagcctc 21821906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 547 - 652
Target Start/End: Original strand, 29469599 - 29469705
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| | ||||| |||||| |||| |||||||||||| ||||||||| | || |||||||||||||| |||||||||    
T  29469599 atggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatca 29469698  T
Q  646 gagcctc 652  Q
    |||||||    
T  29469699 gagcctc 29469705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 547 - 652
Target Start/End: Complemental strand, 36277316 - 36277210
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagt-cctaccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| | ||||| |||||||||||  || |||||||| ||||||||||| || |||||||||||||||||| |||||    
T  36277316 atggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagtcgattttgtggggttgtgttagtcccaaccacgatttctaagatgttatca 36277217  T
Q  646 gagcctc 652  Q
    |||||||    
T  36277216 gagcctc 36277210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 555 - 668
Target Start/End: Complemental strand, 20305745 - 20305631
Alignment:
Q  555 ataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcct-accacgatttctaagatggtatcagagcctcc 653  Q
    ||||||| ||||||||||| | ||||| |||||||||||||   |||||||| |||||||||| ||| |||| ||||||||| ||| ||||| |||||||    
T  20305745 ataatgtgtttataagtgggggcaatcctcacctcacaaacttattttgtggggttgtgttaggcctaaccatgatttctaatatgctatcatagcctcc 20305646  T
Q  654 tccttgatctgttgg 668  Q
    ||| ||||| |||||    
T  20305645 tccatgatccgttgg 20305631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 557 - 652
Target Start/End: Original strand, 31892155 - 31892252
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcc--taccacgatttctaagatggtatcagagcctc 652  Q
    ||||| ||||||||||| ||||||| ||||||||||| |||||||||||||||| |||||| ||   ||| |||| |||||||||| |||||||||||    
T  31892155 aatgtatttataagtggggacaatcctcacctcacaagccggttttgtggagttatgttaggcccaaaccccgatctctaagatggaatcagagcctc 31892252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 34027403 - 34027493
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || |||||||||||||| ||||||| ||||||||    
T  34027403 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtattagagcctc 34027493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 577 - 652
Target Start/End: Original strand, 11743052 - 11743128
Alignment:
Q  577 caatcatcacctcacaaaccggttttgtggagttgtgttagtcct-accacgatttctaagatggtatcagagcctc 652  Q
    |||||||||| |||||||||||||||||||| ||||||||| | | |||||||||| ||||||| ||||||||||||    
T  11743052 caatcatcacatcacaaaccggttttgtggaattgtgttagacttaaccacgatttttaagatgatatcagagcctc 11743128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 547 - 652
Target Start/End: Original strand, 1596588 - 1596693
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| || |||||||| | ||||| |||||| |||| ||||||| |||| |||||||||| |||| |||| ||||||||||||||||||    
T  1596588 atggcctgacaatgtgttaataagtgggggcaatcctcaccttacaagccggttt-gtggggttgtgttaggcctaaccacaatttctaagatggtatca 1596686  T
Q  646 gagcctc 652  Q
    |||||||    
T  1596687 gagcctc 1596693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 547 - 652
Target Start/End: Original strand, 21861288 - 21861394
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||  | ||||| |||||| |||| ||||||||||||  |||||||| | || ||||| ||||||||||||||||||    
T  21861288 atggcctgacaatgtgtttataagtgagggcaatcctcaccttacaagccggttttgtgggattgtgttaggcccaaccaccatttctaagatggtatca 21861387  T
Q  646 gagcctc 652  Q
    |||||||    
T  21861388 gagcctc 21861394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 547 - 635
Target Start/End: Original strand, 29469834 - 29469923
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaa 635  Q
    |||| |||| ||||| ||||||||||| | ||||| |||||| |||| |||||||||||||||||||||| | || ||||||||||||||    
T  29469834 atggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggagttgtgttaggcccaaccacgatttctaa 29469923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 31892391 - 31892472
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||| ||||||||||| ||||||| ||||||||||| |||||||||||| | ||||||| | || ||||||||||||||||    
T  31892391 aatgtatttataagtggggacaatcttcacctcacaagccggttttgtggggatgtgttaggcccaaccacgatttctaaga 31892472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 540 - 648
Target Start/End: Complemental strand, 48243534 - 48243425
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagat 638  Q
    ||||| ||||| |||| ||||| ||||||||||| | ||||| ||| || |||| |||||||||||| ||||||||||  || |||| ||||| ||||||    
T  48243534 atatgtgatggcctgacaatgtgtttataagtgggggcaatcctcatcttacaagccggttttgtggggttgtgttagacccaaccatgatttttaagat 48243435  T
Q  639 ggtatcagag 648  Q
    ||||||||||    
T  48243434 ggtatcagag 48243425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 557 - 652
Target Start/End: Complemental strand, 3038164 - 3038068
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||| ||||||||||| | ||||| |||| |||||| |||||||||||| ||||||||| | || |||| ||||||||||||  ||||||||||||    
T  3038164 aatgtgtttataagtgggggcaatcctcacgtcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagataatatcagagcctc 3038068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 572 - 651
Target Start/End: Complemental strand, 40121989 - 40121909
Alignment:
Q  572 ggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcct 651  Q
    ||||||| || |||||  |||| |||||||||||| |||||||||| || | |||||||||||||||||||||||||||||    
T  40121989 ggagacactcctcaccctacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcct 40121909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 546 - 637
Target Start/End: Complemental strand, 48243152 - 48243060
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||| |||| ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || |||||||||| |||||    
T  48243152 gatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttgtaaga 48243060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 585 - 680
Target Start/End: Complemental strand, 48417567 - 48417471
Alignment:
Q  585 acctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctcctccttgatctgttgggtcatctgctat 680  Q
    |||||||||||| ||||||||| ||||||||| | || ||||| |||||| ||||||||| ||||||| ||||||||||  ||||| || |||||||    
T  48417567 acctcacaaaccagttttgtggggttgtgttaggcccaaccacaatttcttagatggtattagagccttctccttgatccattgggccacctgctat 48417471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 533 - 652
Target Start/End: Complemental strand, 48661659 - 48661539
Alignment:
Q  533 acatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgattt 631  Q
    |||||| ||| ||||||  |||| ||||| |||||| |||| | ||||| ||||||||||| |||||||||||   |||||||||  || ||||||||||    
T  48661659 acatcagataggagatgacctgacaatgtatttataggtgggggcaatcctcacctcacaagccggttttgtgagattgtgttagacccaaccacgattt 48661560  T
Q  632 ctaagatggtatcagagcctc 652  Q
    |||| ||| ||||||||||||    
T  48661559 ctaatatgatatcagagcctc 48661539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 540 - 631
Target Start/End: Complemental strand, 31485521 - 31485430
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcctaccacgattt 631  Q
    ||||| ||||| |||| ||||| ||||||||||| | ||||| |||| |||||||| |||||||||  |||||||||| || ||||||||||    
T  31485521 atatgtgatggcctgacaatgtgtttataagtgggggcaatcctcacatcacaaactggttttgtgaggttgtgttaggccaaccacgattt 31485430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 572 - 649
Target Start/End: Original strand, 6782880 - 6782958
Alignment:
Q  572 ggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagc 649  Q
    |||| ||||| |||||| |||| |||||||||||| |||||||||| | | |||||||||||||| |||||||||||||    
T  6782880 ggaggcaatcctcaccttacaagccggttttgtggggttgtgttaggctcaaccacgatttctaacatggtatcagagc 6782958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 17202189 - 17202279
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||  ||| ||||||| |||||||||||| ||||||||| | || |||||||||| ||| ||||||||||||||||    
T  17202189 tttataagtgggggcaattctcatctcacaagccggttttgtggggttgtgttaggcccaaccacgatttttaatatggtatcagagcctc 17202279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 563 - 648
Target Start/End: Complemental strand, 26562147 - 26562061
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagag 648  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||| |||||| | | ||||| |||||||| ||||||||||||    
T  26562147 tttataagtgggggcaatcttcacctcacaagccggttttgtggggttatgttaggctcaaccaccatttctaatatggtatcagag 26562061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 546 - 697
Target Start/End: Complemental strand, 3520131 - 3519979
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgt-ggagttgtgtta-gtcctaccacgatttctaagatggtat 643  Q
    ||||| |||| ||||| ||||||||||| | ||||| ||||||| ||| |||||||| |  | ||||||||| || | |||||||||||| || ||||||    
T  3520131 gatggtctgacaatgtgtttataagtgggggcaatcctcacctcgcaagccggttttataagggttgtgttaggttcaaccacgatttcttagttggtat 3520032  T
Q  644 cagagcctcctccttgatctgttgggtcatctgctattgggttttcgttatcgg 697  Q
    |||||||| |||| |||||  ||||| || |||||||  |||||||| ||||||    
T  3520031 cagagcct-ctccatgatccattgggccacctgctatctggttttcgctatcgg 3519979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 546 - 638
Target Start/End: Complemental strand, 21055044 - 21054951
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagat 638  Q
    ||||| |||| ||| | ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || ||||| |||||||||||    
T  21055044 gatggcctgacaatatgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 21054951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 563 - 635
Target Start/End: Complemental strand, 31257105 - 31257032
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaa 635  Q
    ||||||||||| | ||||| |||||||||||||| ||||||||| |||||||||| | | ||||||||||||||    
T  31257105 tttataagtgggggcaatcttcacctcacaaaccagttttgtggggttgtgttagactcaaccacgatttctaa 31257032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 540 - 617
Target Start/End: Complemental strand, 32278982 - 32278905
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||| ||||| |||| ||||| ||||||||||| ||||||| |||||||| || |||||||||||  ||||||||||    
T  32278982 atatgtgatggtctgacaatgtgtttataagtggggacaatcgtcacctcataagccggttttgtgaggttgtgttag 32278905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 563 - 646
Target Start/End: Complemental strand, 2544521 - 2544437
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcag 646  Q
    ||||||||||| | ||||| |||||||||||  ||||||||||| ||||||||| | || |||||||||| ||| ||||||||||    
T  2544521 tttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaggcccaaccacgatttttaatatggtatcag 2544437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 540 - 604
Target Start/End: Original strand, 4454763 - 4454827
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgt 604  Q
    |||| |||||| |||| ||||| ||||||||||| | ||||| ||||||||||||||||||||||    
T  4454763 atattagatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaaaccggttttgt 4454827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 578 - 649
Target Start/End: Original strand, 10903110 - 10903182
Alignment:
Q  578 aatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggtatcagagc 649  Q
    |||| ||||||||||| |||||||||||||||||||||||  || ||||||||| |||| ||| |||||||||    
T  10903110 aatcctcacctcacaagccggttttgtggagttgtgttagccccaaccacgattactaaaatgatatcagagc 10903182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 652
Target Start/End: Original strand, 28080629 - 28080764
Alignment:
Q  518 tattgtgaagagtct-acatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta 616  Q
    |||||| |||||||| |||||  ||| ||||||  |||| ||||| ||||||||| | | ||||  |||| ||||||  ||||||||||| ||| |||||    
T  28080629 tattgttaagagtctcacatcggataagagatgacctgacaatgtgtttataagtaggg-caattttcacttcacaagtcggttttgtggggttatgtta 28080727  T
Q  617 g-tcctaccacgatttctaagatggtatcagagcctc 652  Q
    | ||| |||||||||||||||||| ||||||||||||    
T  28080728 gatccaaccacgatttctaagatgatatcagagcctc 28080764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 553 - 631
Target Start/End: Original strand, 8075859 - 8075938
Alignment:
Q  553 tgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgattt 631  Q
    ||||||||| ||||||||||| || |||| |||||||||||  ||||||| ||||||||||| | |||| ||||||||||    
T  8075859 tgataatgtgtttataagtggggataatcttcacctcacaagtcggttttatggagttgtgtcaggtccaaccacgattt 8075938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 557 - 643
Target Start/End: Complemental strand, 23796264 - 23796177
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtat 643  Q
    ||||| ||||||||||| | ||||||||||||||||||  | |||||||| |||||||||| | | |||| ||||| |||||||||||    
T  23796264 aatgtgtttataagtgggggcaatcatcacctcacaaattgattttgtggggttgtgttaggctcaaccatgatttttaagatggtat 23796177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 563 - 649
Target Start/End: Complemental strand, 31257341 - 31257254
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagc 649  Q
    ||||||||||| | ||||| | |  |||||| |||||||||||| |||||||||| || | ||||||||||||| |||||||||||||    
T  31257341 tttataagtgggggcaatccttaattcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagc 31257254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 552 - 638
Target Start/End: Complemental strand, 36277076 - 36276989
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcct-accacgatttctaagat 638  Q
    |||| ||||| ||||||||||| ||||||  ||||||||||| | |||||| |||  ||||||||| ||| |||||||||||||||||    
T  36277076 ctgacaatgtgtttataagtggggacaattctcacctcacaagcaggttttatgggattgtgttaggcctaaccacgatttctaagat 36276989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 578 - 648
Target Start/End: Complemental strand, 21213100 - 21213030
Alignment:
Q  578 aatcatcacctcacaaaccggttttgtggagttgtgttagtcctaccacgatttctaagatggtatcagag 648  Q
    ||||||||||||||||   ||||||||||||||||||||| |    ||| |||||||||||||||||||||    
T  21213100 aatcatcacctcacaagttggttttgtggagttgtgttaggctattcacaatttctaagatggtatcagag 21213030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 572 - 652
Target Start/End: Original strand, 33834209 - 33834291
Alignment:
Q  572 ggagacaatcatcacctcacaaaccggtttt-gtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctc 652  Q
    |||||||||| |||||| |  |||||||||| |||| |||||||||| || | |||| |||||||||||||||||||||||||    
T  33834209 ggagacaatcctcaccttatgaaccggtttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctc 33834291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 599 - 652
Target Start/End: Complemental strand, 36993346 - 36993292
Alignment:
Q  599 ttttgtggagttgtgttag-tcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||| ||||||||| ||| |||| ||||||||||||||||||||||||||    
T  36993346 ttttgtggaattgtgttagatccaaccatgatttctaagatggtatcagagcctc 36993292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 638
Target Start/End: Original strand, 47710447 - 47710529
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagat 638  Q
    ||||| ||||||||||| | ||||| ||||||||||| || ||||||||| ||||||||| | || ||||| |||||||||||    
T  47710447 aatgtgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaagat 47710529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 638
Target Start/End: Original strand, 47722103 - 47722185
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagat 638  Q
    ||||| ||||||||||| | ||||| ||||||||||| || ||||||||| ||||||||| | || ||||| |||||||||||    
T  47722103 aatgtgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaagat 47722185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 652
Target Start/End: Complemental strand, 2404501 - 2404392
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggta 642  Q
    |||| ||||||| ||||| ||||||||| | | ||||| ||||| |||||  ||||||| | | | |||||||  | | |||||||||||||||||||||    
T  2404501 gagacggactgacaatgtgtttataagtaggggcaatcctcaccccacaagtcggttttatagggctgtgttaagctcaaccacgatttctaagatggta 2404402  T
Q  643 tcagagcctc 652  Q
    ||||||||||    
T  2404401 tcagagcctc 2404392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 635
Target Start/End: Complemental strand, 36206137 - 36206064
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaa 635  Q
    ||||||||||||| ||||| ||||||||||| |||||||| ||| ||||| |||| | | ||||||||||||||    
T  36206137 tttataagtggaggcaatcttcacctcacaagccggttttatggggttgtattaggctcaaccacgatttctaa 36206064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 615
Target Start/End: Complemental strand, 40898794 - 40898737
Alignment:
Q  558 atgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtt 615  Q
    |||| ||||||||||| | ||||| |||||| |||||||| |||||||||||||||||    
T  40898794 atgtgtttataagtgggggcaatcctcaccttacaaaccgattttgtggagttgtgtt 40898737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 557 - 617
Target Start/End: Original strand, 1596832 - 1596892
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||||||||| | ||||| |||||| |||| |||||||||| | ||||||||||    
T  1596832 aatgtttttataagtgggggcaatcctcaccttacaagccggttttgtagggttgtgttag 1596892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 598 - 653
Target Start/End: Complemental strand, 5871851 - 5871795
Alignment:
Q  598 gttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctcc 653  Q
    ||||||| | ||||||||||||| | ||||||||||||||||| |||||||||||||    
T  5871851 gttttgtagggttgtgttagtcccaaccacgatttctaagatgatatcagagcctcc 5871795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 616 - 652
Target Start/End: Complemental strand, 6001690 - 6001654
Alignment:
Q  616 agtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||| |||||||||||||||||||||||||||||||    
T  6001690 agtccaaccacgatttctaagatggtatcagagcctc 6001654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 601 - 652
Target Start/End: Complemental strand, 10882275 - 10882223
Alignment:
Q  601 ttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctc 652  Q
    |||||| |||||||||| || | ||||||||||||||||||||||||||||||    
T  10882275 ttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctc 10882223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 547 - 638
Target Start/End: Complemental strand, 37923339 - 37923247
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagat 638  Q
    |||| |||| ||||| ||||||| | | ||||||||||| ||||||||| ||||||||| |  |||||||| ||  |||||||||||||||||    
T  37923339 atggtctgacaatgtgtttataaatagggacaatcatcatctcacaaactggttttgtgaaactgtgttagatctaaccacgatttctaagat 37923247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 617
Target Start/End: Complemental strand, 42985243 - 42985143
Alignment:
Q  518 tattgtgaagagtct-acatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta 616  Q
    |||||| |||||||| |||||  ||||| |||||  ||| ||||| ||||||||||||| ||||| |||||||||||  || |||||||  |||||||||    
T  42985243 tattgttaagagtctcacatcggatatgtgatggtttgacaatgtgtttataagtggaggcaatcctcacctcacaagtcgattttgtgaggttgtgtta 42985144  T
Q  617 g 617  Q
    |    
T  42985143 g 42985143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 617
Target Start/End: Original strand, 3392975 - 3393046
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||| |||| ||||| ||||||||||| || |||  ||||||||||| ||| |||||||| ||||||||||    
T  3392975 gatggcctgacaatgtgtttataagtggggaaaattctcacctcacaagccgattttgtggggttgtgttag 3393046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 577 - 651
Target Start/End: Original strand, 4506956 - 4507031
Alignment:
Q  577 caatcatcacctcacaaaccggttttgtggagttgtgttagtcctacc-acgatttctaagatggtatcagagcct 651  Q
    ||||| |||||||||||  ||||||| ||| |||||||||| || | | |||||||||||||| ||||||||||||    
T  4506956 caatcctcacctcacaagtcggttttatggggttgtgttagacccaactacgatttctaagattgtatcagagcct 4507031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 615
Target Start/End: Complemental strand, 11211771 - 11211701
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtt 615  Q
    ||||||| || | ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||    
T  11211771 gagatggcctaacaatgtctttataagtgggg-caatcctcacctcacaagccggttttgtggggttgtgtt 11211701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 617
Target Start/End: Original strand, 15317557 - 15317616
Alignment:
Q  558 atgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    |||| ||||||||||| | ||||| |||||||||||||  ||||||||| ||||||||||    
T  15317557 atgtgtttataagtgggggcaatcctcacctcacaaactagttttgtggtgttgtgttag 15317616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 637
Target Start/End: Original strand, 21861523 - 21861614
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||| |||| ||||| ||||||||||| | ||||| |||||| |||| ||| |||||||| ||||||||| | || ||||| ||||||||||    
T  21861523 atggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccgattttgtggggttgtgttaggcccaaccaccatttctaaga 21861614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 563 - 637
Target Start/End: Original strand, 34027637 - 34027712
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||||||||| | ||||| |||| |||||| |||||||||||| ||||||||| | || | ||||||||||||||    
T  34027637 tttataagtgggggcaatcctcacttcacaagccggttttgtggggttgtgttaggcccaatcacgatttctaaga 34027712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 577 - 646
Target Start/End: Original strand, 4886353 - 4886423
Alignment:
Q  577 caatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcag 646  Q
    ||||| ||||||||||| ||||||| | |  |||||||||| || | ||||||||||||||||||||||||    
T  4886353 caatcctcacctcacaagccggtttggcgaggttgtgttaggcccaaccacgatttctaagatggtatcag 4886423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 563 - 652
Target Start/End: Complemental strand, 23796096 - 23796007
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||| ||||||||||| ||| |||| ||| | |||||||| | | |||| ||||| ||||||||||||||||||||    
T  23796096 tttataagtgggg-caatcctcacctcacaagccgattttatggggatgtgttaggctcaaccatgatttttaagatggtatcagagcctc 23796007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 544 - 617
Target Start/End: Complemental strand, 32879708 - 32879634
Alignment:
Q  544 gagatggactgataatgtttttataagtggaga-caatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||| |||| ||||| ||||||||||| |  ||||| ||||||||||| ||||||||| || ||||||||||    
T  32879708 gagatggcctgacaatgtgtttataagtggggggcaatcctcacctcacaagccggttttgcggggttgtgttag 32879634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 631
Target Start/End: Complemental strand, 2544289 - 2544220
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgattt 631  Q
    ||||||||||| | ||||| |||||| |||| || ||||||||| ||||||||| | |||||||||||||    
T  2544289 tttataagtgggggcaatcttcaccttacaagccagttttgtggggttgtgttaggccctaccacgattt 2544220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 40746113 - 40746032
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaaga 637  Q
    ||||| ||||||||  | ||||||| ||||||||||||||| ||||||||  |||||||||  || ||||| ||||||||||    
T  40746113 aatgtgtttataagaagggacaatcttcacctcacaaaccgattttgtgggattgtgttagacccaaccacaatttctaaga 40746032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 654
Target Start/End: Complemental strand, 40899001 - 40898904
Alignment:
Q  558 atgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagcctcct 654  Q
    |||| ||||||||||| | ||||||||||||||||| | |||||| |||  ||||||||| | | | ||||| ||||||||| ||||| ||| |||||    
T  40899001 atgtgtttataagtgggggcaatcatcacctcacaagctggttttatgggattgtgttaggctcaatcacgaattctaagattgtatccgagtctcct 40898904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 808 - 849
Target Start/End: Complemental strand, 44874407 - 44874366
Alignment:
Q  808 gaaatcctcacctcacagactgattttgtagggttgtgttag 849  Q
    ||||||||||||||||| || ||||||||| |||||||||||    
T  44874407 gaaatcctcacctcacaaaccgattttgtatggttgtgttag 44874366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 2e-24; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 547 - 696
Target Start/End: Original strand, 16239585 - 16239735
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| | ||| | ||||||||||| ||||||||||||  ||||||||| || | |||||||||||||||||||||||    
T  16239585 atggcctgacaatgtgtttataagtgggggcaaacctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaagatggtatca 16239684  T
Q  646 gagcctcctccttgatctgttgggtcatctgctattgggttttcgttatcg 696  Q
    |||||||||||  |||| ||| || || |||||||  ||||| ||||||||    
T  16239685 gagcctcctccaagatccgtttggccacctgctatcaggtttccgttatcg 16239735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 545 - 652
Target Start/End: Original strand, 54368508 - 54368616
Alignment:
Q  545 agatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggtat 643  Q
    |||||| |||| ||||| ||||||||||| | ||||| ||||||||||| |||||||| ||| ||||||||||  || ||||||||||||||||||||||    
T  54368508 agatggcctgaaaatgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttagacccaaccacgatttctaagatggtat 54368607  T
Q  644 cagagcctc 652  Q
    |||||||||    
T  54368608 cagagcctc 54368616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 563 - 652
Target Start/End: Complemental strand, 1723150 - 1723060
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || |||||||||||||||||||||||||||||||    
T  1723150 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctc 1723060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 552 - 757
Target Start/End: Complemental strand, 12930213 - 12930008
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcc 650  Q
    |||| ||||| || ||| |||| ||||||  |||| |||||| |||||||||||| |||||||||| || | |||| |||||||||||||||||| ||||    
T  12930213 ctgacaatgtgttcatatgtggggacaattctcacttcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcaaagcc 12930114  T
Q  651 tcctccttgatctgttgggtcatctgctattgggttttcgttatcggatcgctctccatttatatccacgctccagatgtccagtccaaggcaagagagg 750  Q
    |||||| ||||| |||||| || |||||||  |||||  |||||| |  | | | |||||| | |||| |||||||||||||||||| ||||  ||||||    
T  12930113 tcctccatgatccgttgggccacctgctatcaggtttctgttatcaggccac-caccatttgtgtccatgctccagatgtccagtcctaggcgtgagagg 12930015  T
Q  751 ttgtgtt 757  Q
     ||||||    
T  12930014 gtgtgtt 12930008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 547 - 652
Target Start/End: Original strand, 54567886 - 54567992
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| |  |||| ||||||||||| |||||||||||| ||||||||| | || ||||||||||||||||||||||||    
T  54567886 atggcctgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatca 54567985  T
Q  646 gagcctc 652  Q
    |||||||    
T  54567986 gagcctc 54567992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 544 - 654
Target Start/End: Complemental strand, 45139064 - 45138953
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggta 642  Q
    ||||||| |||| || || || |||||||| | ||||| ||||||||||| |||||||||||| ||||||| || || | ||||||||||||||||||||    
T  45139064 gagatggcctgacaacgtgttaataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtaagacccaaccacgatttctaagatggta 45138965  T
Q  643 tcagagcctcct 654  Q
    ||||||||||||    
T  45138964 tcagagcctcct 45138953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 11589795 - 11589885
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || |||||||||||||| ||||||||||||||||    
T  11589795 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctc 11589885  T

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Target: chr3; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 583 - 680
Target Start/End: Original strand, 39620122 - 39620220
Alignment:
Q  583 tcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctcctccttgatctgttgggtcatctgctat 680  Q
    |||| |||||| |||||||||  ||||||||||| || | |||||||||||||||||||||||||||||||||||  ||||||||||| || |||||||    
T  39620122 tcacttcacaagccggttttgaagagttgtgttaagttcaaccacgatttctaagatggtatcagagcctcctccaagatctgttgggccacctgctat 39620220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 563 - 648
Target Start/End: Original strand, 4155334 - 4155420
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagag 648  Q
    ||||||||||| | ||||| |||||||| || |||||||||||| ||||||||| | || |||||||||||||||||||||||||||    
T  4155334 tttataagtgggggcaatcctcacctcaaaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagag 4155420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 45828029 - 45828119
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcc-taccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||| | | ||||| ||||||||||| |||||||||||  |||||||||| || |||||| |||||||||||||||||||||||||    
T  45828029 tttataagttggggcaatcctcacctcacaagccggttttgtgaggttgtgttaggccctaccacaatttctaagatggtatcagagcctc 45828119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 540 - 639
Target Start/End: Complemental strand, 20303161 - 20303061
Alignment:
Q  540 atatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagat 638  Q
    |||||| |||| |||| ||||| ||||||||||| | ||||| ||||||||||||||||||||||||  ||||||||| | | |||||||||| ||||||    
T  20303161 atatgacatggcctgacaatgtatttataagtgggggcaatcctcacctcacaaaccggttttgtgggattgtgttaggctcaaccacgatttttaagat 20303062  T
Q  639 g 639  Q
    |    
T  20303061 g 20303061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 546 - 652
Target Start/End: Complemental strand, 35038519 - 35038412
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatc 644  Q
    ||||| |||| ||||| ||||||||||| | ||||| |||||| |||| | |||||||||| ||||||||| | || ||||||| |||||||||||||||    
T  35038519 gatggcctgacaatgtgtttataagtgggggcaatcctcacctgacaagctggttttgtggggttgtgttaggcccaaccacgacttctaagatggtatc 35038420  T
Q  645 agagcctc 652  Q
    || |||||    
T  35038419 agtgcctc 35038412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 547 - 648
Target Start/End: Complemental strand, 16927039 - 16926937
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtt-agtcctaccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| |  |||| ||| ||||||| |||||||||||| |||||||| ||  | ||||||||||||||||||||||||    
T  16927039 atggcctgacaatgtgtttataagtgggggtaatcctcatctcacaagccggttttgtggggttgtgttaagctcaaccacgatttctaagatggtatca 16926940  T
Q  646 gag 648  Q
    |||    
T  16926939 gag 16926937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 563 - 652
Target Start/End: Complemental strand, 20327923 - 20327833
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| | || |||| ||||||||| |||||||||| |||||    
T  20327923 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaatatggtatcagtgcctc 20327833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 547 - 648
Target Start/End: Original strand, 39269325 - 39269427
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcct-accacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| | ||||| ||||||||||| ||||||||| ||  ||||||||| ||| || ||||||| |||||||||||||    
T  39269325 atggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgagggattgtgttaggcctaactacgatttttaagatggtatca 39269424  T
Q  646 gag 648  Q
    |||    
T  39269425 gag 39269427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 552 - 652
Target Start/End: Original strand, 9272960 - 9273061
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtt-agtcctaccacgatttctaagatggtatcagagcc 650  Q
    |||||||| | ||||||||||| | ||| | ||||||||||| |||||||||||| |||||||| || || ||||| |||||||| ||||||||||| ||    
T  9272960 ctgataatttgtttataagtgggggcaaccctcacctcacaagccggttttgtggggttgtgttaagcccaaccaccatttctaatatggtatcagaacc 9273059  T
Q  651 tc 652  Q
    ||    
T  9273060 tc 9273061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 544 - 647
Target Start/End: Original strand, 22729091 - 22729195
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggta 642  Q
    ||||||| |||| ||||| |||| |||||| | ||||| |||| |||||| |||||||||||  ||||||||| | || ||||| |||||||||||||||    
T  22729091 gagatggtctgacaatgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggcccaaccacaatttctaagatggta 22729190  T
Q  643 tcaga 647  Q
    |||||    
T  22729191 tcaga 22729195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 546 - 637
Target Start/End: Complemental strand, 35038285 - 35038193
Alignment:
Q  546 gatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||| |||| ||||| ||||||||||| |  |||| ||||||||||| |||||||||||| ||||||||| | || ||||||||||||||||    
T  35038285 gatggcctgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35038193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 590 - 652
Target Start/End: Complemental strand, 8142694 - 8142631
Alignment:
Q  590 acaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctc 652  Q
    ||||| ||||||||||| ||||||||||  ||| ||||||||||||||||||||||||||||||    
T  8142694 acaaatcggttttgtggggttgtgttaggtctaaccacgatttctaagatggtatcagagcctc 8142631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 544 - 614
Target Start/End: Original strand, 1800206 - 1800276
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgt 614  Q
    ||||||| |||| | ||| ||||||||||| | ||||| |||||||||||||||||||||||| |||||||    
T  1800206 gagatggtctgacagtgtatttataagtgggggcaatcctcacctcacaaaccggttttgtggggttgtgt 1800276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 564 - 637
Target Start/End: Complemental strand, 7697471 - 7697397
Alignment:
Q  564 ttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcct-accacgatttctaaga 637  Q
    |||||||||| | ||||||||||||||||| | |||||||||| |||||||||| ||| ||||| ||||||||||    
T  7697471 ttataagtgggggcaatcatcacctcacaagctggttttgtggggttgtgttaggcctaaccacaatttctaaga 7697397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 587 - 652
Target Start/End: Complemental strand, 20303435 - 20303369
Alignment:
Q  587 ctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||| |||||||||||| |||||||||| ||| ||||| |||||||| ||||||||||||||||    
T  20303435 ctcacaagccggttttgtggggttgtgttaggtccaaccacaatttctaatatggtatcagagcctc 20303369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 547 - 617
Target Start/End: Complemental strand, 20327704 - 20327634
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    |||| |||| ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||||    
T  20327704 atggcctgacaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 20327634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 633 - 715
Target Start/End: Original strand, 31150924 - 31151006
Alignment:
Q  633 taagatggtatcagagcctcctccttgatctgttgggtcatctgctattgggttttcgttatcggatcgctctccatttatat 715  Q
    ||||||||||||||||||||||||  |||| |||||| ||  ||||||| ||||| ||||||||| || ||| ||||||||||    
T  31150924 taagatggtatcagagcctcctccaagatccgttgggccacttgctattaggtttccgttatcgggtcactcaccatttatat 31151006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 552 - 648
Target Start/End: Complemental strand, 17001506 - 17001409
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagag 648  Q
    |||| ||||| ||||||||||| | |||||||||||||| ||  || |||||||| || |||||| |||| |||| ||||||||| ||||||||||||    
T  17001506 ctgacaatgtgtttataagtgggggcaatcatcacctcataaggcgattttgtggggtagtgttaggtccaaccatgatttctaaaatggtatcagag 17001409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 563 - 651
Target Start/End: Original strand, 17638245 - 17638333
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcct 651  Q
    ||||||||||| | ||||| ||||||||||| | ||||||| || |||||||||| || | ||||||||||||||||||||| |||||||    
T  17638245 tttataagtgggg-caatcctcacctcacaagctggttttgaggggttgtgttaggcccaaccacgatttctaagatggtataagagcct 17638333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 557 - 641
Target Start/End: Original strand, 31317233 - 31317317
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggt 641  Q
    ||||| ||||||||||| | ||||| ||||||||||| ||||||||||||  ||||||||| | | ||||||||||||||||||||    
T  31317233 aatgtgtttataagtgggg-caatcctcacctcacaagccggttttgtgggattgtgttaggctcaaccacgatttctaagatggt 31317317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 31317470 - 31317551
Alignment:
Q  557 aatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||| ||||||||||| || |||||||||||||||| ||| ||||| || ||||||||| | || ||||||||||||||||    
T  31317470 aatgtgtttataagtggggaaaatcatcacctcacaagccgattttgcggggttgtgttaggcccaaccacgatttctaaga 31317551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 544 - 617
Target Start/End: Complemental strand, 38791543 - 38791470
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||| |||| ||||| ||||||||||  ||||||| |||||||||||| || |||||||| ||||||||||    
T  38791543 gagatggtctgacaatgtatttataagtgaggacaatcctcacctcacaaatcgattttgtggggttgtgttag 38791470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 552 - 617
Target Start/End: Original strand, 49629604 - 49629669
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    |||| ||||| ||||||||||| | |||||  ||||||||||||||||||||||| ||||||||||    
T  49629604 ctgaaaatgtgtttataagtggcggcaatccccacctcacaaaccggttttgtggggttgtgttag 49629669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 552 - 638
Target Start/End: Complemental strand, 3975443 - 3975356
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagat 638  Q
    |||| ||||| ||||||||||| || |||||||||||| ||| ||| ||||||||| |||||||||  || ||||| |||||||||||    
T  3975443 ctgacaatgtgtttataagtggggataatcatcacctctcaagccgattttgtggaattgtgttagacccaaccactatttctaagat 3975356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 622 - 737
Target Start/End: Complemental strand, 11659696 - 11659581
Alignment:
Q  622 accacgatttctaagatggtatcagagcctcctccttgatctgttgggtcatctgctattgggttttcgttatcggatcgctctccatttatatccacgc 721  Q
    |||||||| |||||||| |||| ||||||||||||  |||| |||||   | |||||||  |||||||| ||||||| | | | |||||||| |||| ||    
T  11659696 accacgatgtctaagatcgtattagagcctcctccaagatccgttggacaacctgctatcaggttttcgctatcggaccacccaccatttatgtccatgc 11659597  T
Q  722 tccagatgtccagtcc 737  Q
    |||| |||||||||||    
T  11659596 tccaaatgtccagtcc 11659581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 558 - 652
Target Start/End: Complemental strand, 13575000 - 13574905
Alignment:
Q  558 atgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    |||| ||||||||||| |  |||| ||||||||||| || ||||||||| ||||||||| | || ||||| |||||||| ||||||||| ||||||    
T  13575000 atgtgtttataagtgggggaaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccacaatttctaatatggtatcaaagcctc 13574905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 572 - 638
Target Start/End: Original strand, 24866216 - 24866283
Alignment:
Q  572 ggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagat 638  Q
    |||| ||||| ||||||||||| |||||||||||| ||||||||| | || |||||||||||||||||    
T  24866216 ggaggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 24866283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 578 - 652
Target Start/End: Complemental strand, 28087274 - 28087199
Alignment:
Q  578 aatcatcacctcacaaaccggttttgtggagttgtgttagtcctac-cacgatttctaagatggtatcagagcctc 652  Q
    |||||||||||||||| ||||||||||||  |||||| || || |  ||||||||||||||||||| |||||||||    
T  28087274 aatcatcacctcacaagccggttttgtgggattgtgtcagacccaatcacgatttctaagatggtaccagagcctc 28087199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 584 - 742
Target Start/End: Original strand, 33640076 - 33640235
Alignment:
Q  584 cacctcacaaaccggttttgtggagttgtgttagtcctac-cacgatttctaagatggtatcagagcctcctccttgatctgttgggtcatctgctattg 682  Q
    |||||||||| ||||||||||||  ||||||||| || |  ||| |||||||||||| ||||||||||||||||   ||| |||||  || ||| |||      
T  33640076 cacctcacaagccggttttgtgggattgtgttaggcccaatcacaatttctaagatgatatcagagcctcctccaaaatccgttggaccacctgttatca 33640175  T
Q  683 ggttttcgttatcggatcgctctccatttatatccacgctccagatgtccagtccaaggc 742  Q
      ||| |||||| ||| | | | |||||||| |||| |||||||||||||||||| ||||    
T  33640176 tatttccgttattggaccacccaccatttatgtccatgctccagatgtccagtcctaggc 33640235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 544 - 637
Target Start/End: Complemental strand, 472153 - 472059
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcc-taccacgatttctaaga 637  Q
    |||||||  ||| ||||| ||||||||||| | ||||| | ||||||||| |||||||||||| |||||||||| ||  ||||||||||| ||||    
T  472153 gagatggcttgacaatgtgtttataagtgggggcaatccttacctcacaagccggttttgtggggttgtgttaggccaaaccacgatttcaaaga 472059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 637
Target Start/End: Original strand, 4155558 - 4155644
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||| ||||| ||||||||||| ||||||| |||||||| || |||||||| | | ||||||||| | || ||||||||||||||||    
T  4155558 ctgacaatgtgtttataagtggggacaatcctcacctcaaaagccggttttttagggttgtgttaggcccaaccacgatttctaaga 4155644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 568 - 610
Target Start/End: Complemental strand, 24502141 - 24502099
Alignment:
Q  568 aagtggagacaatcatcacctcacaaaccggttttgtggagtt 610  Q
    |||||||| ||||| ||||||||||||||||||||||||||||    
T  24502141 aagtggaggcaatcctcacctcacaaaccggttttgtggagtt 24502099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 531 - 648
Target Start/End: Original strand, 46794032 - 46794149
Alignment:
Q  531 ctacatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgat 629  Q
    |||||||  ||| ||||||| |||| ||||| ||||||||||||| ||||||||||| || |   | ||||| ||||||||||||||   || |||||||    
T  46794032 ctacatcggataagagatggtctgacaatgtgtttataagtggag-caatcatcaccccataggtcagttttatggagttgtgttagatataaccacgat 46794130  T
Q  630 ttctaagatggtatcagag 648  Q
    |||||||||| ||||||||    
T  46794131 ttctaagatgatatcagag 46794149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 651
Target Start/End: Complemental strand, 23708298 - 23708209
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcct 651  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||   |||||||| |||| | ||| |||| ||||||||||| |||||||    
T  23708298 tttataagtgggggcaatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaagatggtattagagcct 23708209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 651
Target Start/End: Complemental strand, 23726754 - 23726665
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcct 651  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||   |||||||| |||| | ||| |||| ||||||||||| |||||||    
T  23726754 tttataagtgggggcaatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaagatggtattagagcct 23726665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 651
Target Start/End: Complemental strand, 23745210 - 23745121
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcct 651  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||   |||||||| |||| | ||| |||| ||||||||||| |||||||    
T  23745210 tttataagtgggggcaatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaagatggtattagagcct 23745121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 651
Target Start/End: Complemental strand, 24063735 - 24063646
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcct 651  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||   |||||||| |||| | ||| |||| ||||||||||| |||||||    
T  24063735 tttataagtgggggcaatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaagatggtattagagcct 24063646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 652
Target Start/End: Complemental strand, 29575975 - 29575874
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggtatcagagcc 650  Q
    |||| ||||| ||||||||||  |||||| ||||| ||||||  ||||||  ||  |||||||||| ||| ||||| |||| ||||||||||||||||||    
T  29575975 ctgagaatgtgtttataagtgaggacaattatcacatcacaagtcggtttgctgaggttgtgttagatccaaccacaatttttaagatggtatcagagcc 29575876  T
Q  651 tc 652  Q
    ||    
T  29575875 tc 29575874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 637
Target Start/End: Original strand, 50930707 - 50930783
Alignment:
Q  558 atgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtcctaccacgatttctaaga 637  Q
    |||| ||||||||||| | ||||| |||||||||||| ||||||||||| ||||||| || |   |||||||||||||||    
T  50930707 atgtgtttataagtgggggcaatcctcacctcacaaaacggttttgtggggttgtgtaagac---ccacgatttctaaga 50930783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 563 - 638
Target Start/End: Original strand, 8018978 - 8019054
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagat 638  Q
    |||||||||||   ||||| ||||||||||| |||||||||||| ||||||||| | || ||||| |||||||||||    
T  8018978 tttataagtgggtgcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaagat 8019054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 544 - 612
Target Start/End: Complemental strand, 45138895 - 45138827
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgt 612  Q
    ||||||| |||  ||||| ||||||||||| | ||||| ||||||||||| |||||||||||| |||||    
T  45138895 gagatggtctggcaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgt 45138827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 578 - 617
Target Start/End: Original strand, 1353473 - 1353512
Alignment:
Q  578 aatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||| ||||||||||||||||| ||||||||||    
T  1353473 aatcatcaccttacaaaccggttttgtggggttgtgttag 1353512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 613
Target Start/End: Complemental strand, 15019357 - 15019302
Alignment:
Q  558 atgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtg 613  Q
    |||| |||||||||||||||||||| ||||||| || |||||||| ||| ||||||    
T  15019357 atgtgtttataagtggagacaatcaccacctcataagccggttttatggggttgtg 15019302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 637
Target Start/End: Complemental strand, 37246721 - 37246666
Alignment:
Q  583 tcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||||||||||||| |||| |||| |||||||| |||| ||||||||||||||||    
T  37246721 tcacctcacaaaccgattttatggaattgtgttaggtccaaccacgatttctaaga 37246666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 563 - 637
Target Start/End: Original strand, 43781593 - 43781668
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||||||||||| ||||| |||| ||||||  ||||||||| ||||||||||| | || ||||| ||||||||||    
T  43781593 tttataagtggaggcaatcctcacttcacaagtcggttttgtagagttgtgttaggcccaaccacaatttctaaga 43781668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 563 - 617
Target Start/End: Complemental strand, 272488 - 272434
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||  ||||||||||||||||||||||| || ||||| ||| ||||||    
T  272488 tttataagtgaggacaatcatcacctcacaaaccgattgtgtggggttatgttag 272434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 544 - 617
Target Start/End: Complemental strand, 13741195 - 13741121
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaa-tcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    |||||||  ||| ||||| ||||||||||| ||||| || ||||||||||| |||||||| ||| ||||||||||    
T  13741195 gagatggtttgacaatgtgtttataagtggggacaaatcctcacctcacaagccggttttttggggttgtgttag 13741121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 583 - 656
Target Start/End: Complemental strand, 15019570 - 15019496
Alignment:
Q  583 tcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctcctcc 656  Q
    |||||||||||| || |||| ||  ||||||||| || | |||||||||||||||||||||| ||||| ||||||    
T  15019570 tcacctcacaaatcgattttatgaggttgtgttatgttcaaccacgatttctaagatggtattagagcatcctcc 15019496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 563 - 652
Target Start/End: Complemental strand, 27670466 - 27670377
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| | ||||| |||||||| |  |||||||||||| ||||||||| | || ||||| | |||||| ||||||||||||||||    
T  27670466 tttataagtgggggcaatcctcacctcaaaggccggttttgtggggttgtgttaggcccaaccacca-ttctaatatggtatcagagcctc 27670377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 630 - 687
Target Start/End: Complemental strand, 22775641 - 22775584
Alignment:
Q  630 ttctaagatggtatcagagcctcctccttgatctgttgggtcatctgctattgggttt 687  Q
    ||||||||||||||||||||||||| |  ||||| ||||| || |||||||| |||||    
T  22775641 ttctaagatggtatcagagcctccttcaagatctattgggccacctgctattaggttt 22775584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 651
Target Start/End: Complemental strand, 23691498 - 23691409
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcct 651  Q
    ||||||||||| | ||||| ||||||||||| |||| ||||||   |||||||| |||| | ||| |||| ||||||||||| |||||||    
T  23691498 tttataagtgggggcaatcctcacctcacaagccggatttgtgagattgtgttaggtccaatcacaatttttaagatggtattagagcct 23691409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 572 - 617
Target Start/End: Complemental strand, 32215580 - 32215535
Alignment:
Q  572 ggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    |||||| ||| |||||| |||| |||||||||||||||||||||||    
T  32215580 ggagaccatcctcaccttacaagccggttttgtggagttgtgttag 32215535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 51; Significance: 1e-19; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 547 - 652
Target Start/End: Original strand, 1910 - 2016
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatca 645  Q
    |||| |||| ||||| ||||||||||| | ||||| |||||| |||| |||||||||||| ||||||||| | || ||||| ||||||||||||||||||    
T  1910 atggtctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatca 2009  T
Q  646 gagcctc 652  Q
    |||||||    
T  2010 gagcctc 2016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 547 - 637
Target Start/End: Original strand, 2145 - 2236
Alignment:
Q  547 atggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    |||| |||| ||||| ||||||||||| | ||||| |||||| |||| |||||||||||| ||||||||| | || ||||| ||||||||||    
T  2145 atggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 2236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 552 - 652
Target Start/End: Complemental strand, 5839 - 5738
Alignment:
Q  552 ctgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcc 650  Q
    |||| ||||| ||||||||||| | ||||| ||| ||||||| ||||||||| || |||||||||| || | ||||||||||||||||||||||||||||    
T  5839 ctgacaatgtgtttataagtgggggcaatcctcatctcacaagccggttttgcggggttgtgttaggcccaaccacgatttctaagatggtatcagagcc 5740  T
Q  651 tc 652  Q
    ||    
T  5739 tc 5738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 563 - 651
Target Start/End: Complemental strand, 3545 - 3456
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag-tcctaccacgatttctaagatggtatcagagcct 651  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||| ||||||||||  || | |||||||||||| |||||||||||||||    
T  3545 tttataagtggggacaatcttcacctcacaagccggttttgtggggttgtgttagacccaatcacgatttctaatatggtatcagagcct 3456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 49; Significance: 2e-18; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 577 - 652
Target Start/End: Original strand, 56483 - 56559
Alignment:
Q  577 caatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||||||||| |||||||||||| ||||||||| | || |||||||||||||| ||||||||||||||||    
T  56483 caatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctc 56559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 544 - 637
Target Start/End: Complemental strand, 288750 - 288656
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgatttctaaga 637  Q
    ||||||| |||| ||||| ||||||  |||   ||||| ||||||||||| | |||||||||||||||||||| | || |||| |||||||||||    
T  288750 gagatggtctgacaatgtatttatatctgggcgcaatcctcacctcacaagctggttttgtggagttgtgttaggcccaaccatgatttctaaga 288656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 515 - 652
Target Start/End: Original strand, 5616 - 5755
Alignment:
Q  515 aattattgtgaagagtct-acatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtg 613  Q
    ||||||||| |||||||  |||||| |||  ||||||  ||| ||||| ||||||||||| |  |||| ||| || |||| |||||||||||| ||||||    
T  5616 aattattgttaagagtcccacatcagatagaagatggcatgacaatgtgtttataagtgggggtaatcctcatcttacaagccggttttgtggggttgtg 5715  T
Q  614 ttagtccta-ccacgatttctaagatggtatcagagcctc 652  Q
    |||| || | ||||||||||||||||||||||||||||||    
T  5716 ttagacccaaccacgatttctaagatggtatcagagcctc 5755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 81852 - 81942
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtccta-ccacgatttctaagatggtatcagagcctc 652  Q
    ||||||||||| ||||||  |||||| ||||  ||||||||||| |||||||||| || | ||||||||||||||||||||||||||||||    
T  81852 tttataagtggggacaattttcaccttacaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctc 81942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 544 - 637
Target Start/End: Original strand, 20930 - 21024
Alignment:
Q  544 gagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtt-agtcctaccacgatttctaaga 637  Q
    ||||||| |||| ||||| |||||||||| ||  |||| ||||||||||| |||||||||||| |||||||| || || ||||||||||||||||    
T  20930 gagatggtctgacaatgtatttataagtgaaggtaatcctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaaga 21024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 533 - 633
Target Start/End: Original strand, 6254 - 6355
Alignment:
Q  533 acatcatatatgagatggactgataatgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtta-gtcctaccacgattt 631  Q
    |||||| ||| ||||| | |||| ||||| ||||||||||| | ||||| ||||||||||| ||| |||||||| ||||||||| | || ||||||||||    
T  6254 acatcagataagagatagtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgattt 6353  T
Q  632 ct 633  Q
    ||    
T  6354 ct 6355  T

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Target: scaffold0334 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 617
Target Start/End: Complemental strand, 4503 - 4449
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttag 617  Q
    ||||||||||| | ||||| ||||||||||| |||||||||||| ||||||||||    
T  4503 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 4449  T

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Target: scaffold0041 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 615
Target Start/End: Original strand, 67490 - 67547
Alignment:
Q  558 atgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgtt 615  Q
    |||| ||||||||||| | ||||| |||||| |||||||| |||||||||||||||||    
T  67490 atgtgtttataagtgggggcaatcctcaccttacaaaccgattttgtggagttgtgtt 67547  T

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Target: scaffold0041; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 654
Target Start/End: Original strand, 67283 - 67380
Alignment:
Q  558 atgtttttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagcctcct 654  Q
    |||| ||||||||||| | ||||||||||||||||| | |||||| |||  ||||||||| | | | ||||| ||||||||| ||||| ||| |||||    
T  67283 atgtgtttataagtgggggcaatcatcacctcacaagctggttttatgggattgtgttaggctcaatcacgaattctaagattgtatccgagtctcct 67380  T

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Target: scaffold0400 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 577 - 652
Target Start/End: Original strand, 3869 - 3945
Alignment:
Q  577 caatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||| ||||||||||| || ||||||||| |||||||||| | | ||||| |||||||| ||||||||||| ||||    
T  3869 caatcctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaatatggtatcagatcctc 3945  T

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Target: scaffold0365 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 577 - 652
Target Start/End: Original strand, 4513 - 4589
Alignment:
Q  577 caatcatcacctcacaaaccggttttgtggagttgtgttagtc-ctaccacgatttctaagatggtatcagagcctc 652  Q
    ||||| ||||||||||| || ||||||||| |||||||||| | | ||||| |||||||| ||||||||||| ||||    
T  4513 caatcctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaatatggtatcagatcctc 4589  T

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Target: scaffold0050 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 563 - 613
Target Start/End: Complemental strand, 69607 - 69557
Alignment:
Q  563 tttataagtggagacaatcatcacctcacaaaccggttttgtggagttgtg 613  Q
    ||||||||||| | ||||| |||||||||||||||||||| ||| ||||||    
T  69607 tttataagtgggggcaatcctcacctcacaaaccggttttatggggttgtg 69557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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