View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4435-Insertion-3 (Length: 628)

Name: NF4435-Insertion-3
Description: NF4435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4435-Insertion-3
NF4435-Insertion-3
[»] chr2 (45 HSPs)
chr2 (178-628)||(15354185-15354618)
chr2 (17-154)||(15354662-15354799)
chr2 (320-380)||(37357269-37357329)
chr2 (179-251)||(36430855-36430927)
chr2 (179-251)||(39307103-39307175)
chr2 (179-251)||(44544137-44544209)
chr2 (17-137)||(22594984-22595103)
chr2 (182-251)||(3911319-3911388)
chr2 (179-251)||(325546-325618)
chr2 (179-251)||(13118908-13118980)
chr2 (178-251)||(22594829-22594902)
chr2 (18-93)||(13507294-13507369)
chr2 (315-378)||(34353261-34353324)
chr2 (179-249)||(2640008-2640078)
chr2 (179-249)||(29943651-29943721)
chr2 (179-245)||(36023685-36023751)
chr2 (179-249)||(36054038-36054108)
chr2 (17-93)||(2640208-2640284)
chr2 (179-235)||(6279779-6279835)
chr2 (17-93)||(36054236-36054312)
chr2 (17-93)||(41515872-41515948)
chr2 (179-251)||(41516074-41516146)
chr2 (179-251)||(13507496-13507566)
chr2 (17-93)||(29943846-29943922)
chr2 (38-93)||(6588296-6588351)
chr2 (313-368)||(15507089-15507144)
chr2 (467-508)||(13507600-13507641)
chr2 (40-93)||(19268628-19268681)
chr2 (24-93)||(40051261-40051330)
chr2 (17-93)||(3911517-3911593)
chr2 (30-128)||(5155746-5155843)
chr2 (17-92)||(6279574-6279649)
chr2 (420-471)||(34353364-34353415)
chr2 (39-93)||(6513323-6513377)
chr2 (31-85)||(13450623-13450677)
chr2 (39-93)||(20212214-20212268)
chr2 (39-93)||(33412997-33413051)
chr2 (39-93)||(34438248-34438302)
chr2 (39-93)||(37909649-37909703)
chr2 (24-93)||(19203860-19203929)
chr2 (17-86)||(44544344-44544413)
chr2 (17-93)||(13119108-13119184)
chr2 (464-508)||(22594754-22594798)
chr2 (17-93)||(36023878-36023953)
chr2 (17-93)||(39307302-39307378)
[»] chr7 (57 HSPs)
chr7 (18-137)||(39226867-39226985)
chr7 (313-466)||(46777273-46777424)
chr7 (179-251)||(428080-428152)
chr7 (18-137)||(37118374-37118492)
chr7 (314-380)||(36016439-36016505)
chr7 (179-251)||(968741-968813)
chr7 (17-93)||(19503159-19503235)
chr7 (179-251)||(38034965-38035037)
chr7 (178-251)||(15877165-15877238)
chr7 (178-251)||(19503360-19503433)
chr7 (17-93)||(15877365-15877441)
chr7 (179-251)||(20883717-20883789)
chr7 (178-249)||(46880108-46880179)
chr7 (7-93)||(35566998-35567084)
chr7 (182-251)||(24189295-24189364)
chr7 (17-128)||(24203124-24203234)
chr7 (179-251)||(24009087-24009159)
chr7 (17-93)||(29273273-29273349)
chr7 (179-251)||(29982298-29982370)
chr7 (179-251)||(45430254-45430326)
chr7 (179-249)||(27275871-27275941)
chr7 (37-137)||(29982116-29982215)
chr7 (179-249)||(30819544-30819614)
chr7 (179-249)||(39926039-39926109)
chr7 (178-251)||(28501581-28501654)
chr7 (315-376)||(41742417-41742478)
chr7 (179-251)||(29273082-29273154)
chr7 (17-92)||(427877-427952)
chr7 (198-249)||(37118601-37118652)
chr7 (179-249)||(24202959-24203029)
chr7 (309-378)||(41467568-41467637)
chr7 (17-93)||(46879909-46879986)
chr7 (17-93)||(20883915-20883991)
chr7 (17-93)||(24189090-24189166)
chr7 (17-93)||(27276068-27276144)
chr7 (17-93)||(30819740-30819816)
chr7 (179-231)||(31603382-31603434)
chr7 (178-246)||(35566806-35566874)
chr7 (17-69)||(37001038-37001090)
chr7 (179-251)||(37002363-37002435)
chr7 (17-93)||(39925834-39925910)
chr7 (17-93)||(45704540-45704616)
chr7 (18-93)||(45430073-45430148)
chr7 (18-93)||(48900552-48900627)
chr7 (178-220)||(39226741-39226783)
chr7 (31-93)||(46919814-46919875)
chr7 (178-247)||(8294345-8294414)
chr7 (32-93)||(41809490-41809551)
chr7 (17-93)||(38034762-38034838)
chr7 (197-241)||(40602511-40602555)
chr7 (38-93)||(42975186-42975241)
chr7 (190-249)||(45704757-45704816)
chr7 (39-93)||(20438877-20438931)
chr7 (26-76)||(31482680-31482730)
chr7 (32-69)||(8770424-8770461)
chr7 (32-76)||(11486303-11486347)
chr7 (31-67)||(37088968-37089004)
[»] chr8 (54 HSPs)
chr8 (314-463)||(32286031-32286178)
chr8 (17-137)||(43460598-43460717)
chr8 (179-251)||(9179031-9179103)
chr8 (179-251)||(2164844-2164916)
chr8 (179-251)||(4471685-4471757)
chr8 (17-93)||(32718994-32719070)
chr8 (179-251)||(36035610-36035682)
chr8 (178-249)||(13197594-13197665)
chr8 (17-137)||(4471483-4471602)
chr8 (179-249)||(7087722-7087792)
chr8 (181-246)||(12980114-12980179)
chr8 (178-251)||(43460442-43460515)
chr8 (19-93)||(12980304-12980378)
chr8 (179-249)||(24247529-24247599)
chr8 (179-249)||(31940508-31940578)
chr8 (7-93)||(31940705-31940791)
chr8 (179-249)||(36496387-36496457)
chr8 (179-249)||(43065166-43065236)
chr8 (32-93)||(40681165-40681226)
chr8 (17-93)||(33628653-33628729)
chr8 (179-230)||(16871807-16871858)
chr8 (182-249)||(33628457-33628524)
chr8 (179-249)||(3642769-3642839)
chr8 (320-378)||(45197180-45197238)
chr8 (313-378)||(7643745-7643810)
chr8 (17-128)||(19725303-19725413)
chr8 (178-251)||(32719194-32719267)
chr8 (17-93)||(9178759-9178835)
chr8 (17-93)||(13197786-13197862)
chr8 (17-93)||(16871604-16871680)
chr8 (179-235)||(45145028-45145084)
chr8 (19-128)||(3642931-3643039)
chr8 (329-368)||(34935159-34935198)
chr8 (37-92)||(36035801-36035856)
chr8 (27-93)||(19718368-19718434)
chr8 (38-137)||(36886222-36886320)
chr8 (420-466)||(40737217-40737263)
chr8 (182-251)||(25698944-25699013)
chr8 (24-93)||(32238227-32238295)
chr8 (32-93)||(43049826-43049887)
chr8 (17-93)||(2165044-2165120)
chr8 (17-93)||(7087917-7087993)
chr8 (17-69)||(36496184-36496236)
chr8 (26-78)||(42444288-42444340)
chr8 (38-93)||(17642364-17642419)
chr8 (30-93)||(24247725-24247788)
chr8 (39-93)||(16323849-16323903)
chr8 (39-93)||(26439584-26439638)
chr8 (221-251)||(35595093-35595123)
chr8 (39-93)||(39347193-39347247)
chr8 (32-78)||(43921436-43921482)
chr8 (218-250)||(11110468-11110500)
chr8 (313-369)||(18421339-18421395)
chr8 (38-93)||(29454203-29454259)
[»] chr4 (75 HSPs)
chr4 (283-376)||(55291236-55291330)
chr4 (325-378)||(27598264-27598317)
chr4 (179-251)||(17616649-17616721)
chr4 (179-251)||(45953744-45953816)
chr4 (178-251)||(34792122-34792195)
chr4 (179-251)||(24346929-24347001)
chr4 (314-378)||(24355818-24355882)
chr4 (179-251)||(27735160-27735232)
chr4 (179-251)||(36187985-36188057)
chr4 (17-93)||(48058767-48058843)
chr4 (21-93)||(55060295-55060367)
chr4 (288-378)||(34360841-34360932)
chr4 (178-251)||(34936791-34936864)
chr4 (178-251)||(56272669-56272742)
chr4 (179-251)||(1182682-1182754)
chr4 (179-251)||(16917311-16917383)
chr4 (17-93)||(30951163-30951239)
chr4 (314-378)||(34650868-34650932)
chr4 (17-93)||(34936594-34936670)
chr4 (179-251)||(48058587-48058659)
chr4 (17-93)||(56272869-56272945)
chr4 (18-93)||(20927732-20927807)
chr4 (179-249)||(22413654-22413724)
chr4 (179-249)||(28013247-28013317)
chr4 (179-249)||(30839486-30839556)
chr4 (179-249)||(52104650-52104720)
chr4 (179-249)||(52760030-52760100)
chr4 (179-249)||(54851135-54851205)
chr4 (17-128)||(22413817-22413927)
chr4 (17-93)||(17616446-17616522)
chr4 (17-93)||(48253980-48254056)
chr4 (179-251)||(48254185-48254257)
chr4 (179-246)||(4540801-4540868)
chr4 (179-230)||(20927555-20927606)
chr4 (21-76)||(25420820-25420875)
chr4 (180-251)||(49144188-49144259)
chr4 (179-249)||(10332729-10332799)
chr4 (179-249)||(23390593-23390663)
chr4 (179-249)||(30951364-30951434)
chr4 (182-248)||(39512752-39512818)
chr4 (179-249)||(46548456-46548526)
chr4 (17-93)||(16917515-16917591)
chr4 (17-93)||(25814420-25814496)
chr4 (179-235)||(25814622-25814678)
chr4 (17-93)||(27734949-27735025)
chr4 (17-93)||(30839282-30839358)
chr4 (17-93)||(40319291-40319367)
chr4 (17-93)||(46564752-46564828)
chr4 (17-93)||(50716504-50716580)
chr4 (17-93)||(52104447-52104523)
chr4 (17-93)||(54851312-54851388)
chr4 (182-248)||(55060487-55060553)
chr4 (24-93)||(43518422-43518491)
chr4 (285-380)||(46405525-46405624)
chr4 (179-219)||(4150369-4150409)
chr4 (17-93)||(23390791-23390867)
chr4 (21-93)||(24347126-24347198)
chr4 (17-93)||(34791919-34791995)
chr4 (17-93)||(36188185-36188261)
chr4 (17-93)||(39512947-39513023)
chr4 (179-235)||(40319105-40319161)
chr4 (17-93)||(45953943-45954019)
chr4 (17-93)||(52759826-52759902)
chr4 (18-69)||(4540597-4540648)
chr4 (27-78)||(30891206-30891257)
chr4 (30-93)||(49143999-49144062)
chr4 (31-93)||(23556136-23556198)
chr4 (17-87)||(28013070-28013140)
chr4 (315-368)||(19655218-19655271)
chr4 (52-93)||(53451772-53451813)
chr4 (29-93)||(10332926-10332990)
chr4 (320-368)||(20393926-20393974)
chr4 (38-78)||(36091364-36091404)
chr4 (17-93)||(46548653-46548729)
chr4 (37-93)||(48018420-48018476)
[»] chr3 (46 HSPs)
chr3 (179-251)||(32621432-32621504)
chr3 (18-93)||(19608582-19608657)
chr3 (313-376)||(26141736-26141799)
chr3 (178-251)||(43388384-43388457)
chr3 (179-251)||(8324479-8324551)
chr3 (179-251)||(54910839-54910911)
chr3 (178-251)||(52179195-52179268)
chr3 (17-93)||(41902240-41902316)
chr3 (178-251)||(19608385-19608458)
chr3 (178-251)||(41902040-41902113)
chr3 (24-93)||(52178999-52179068)
chr3 (17-93)||(43744264-43744340)
chr3 (17-93)||(53444833-53444909)
chr3 (178-249)||(40284009-40284080)
chr3 (30-93)||(40284202-40284265)
chr3 (17-137)||(32621587-32621706)
chr3 (179-249)||(47600190-47600260)
chr3 (17-93)||(46948660-46948736)
chr3 (17-93)||(52457987-52458063)
chr3 (17-93)||(54911039-54911115)
chr3 (182-249)||(46948870-46948937)
chr3 (179-249)||(542459-542529)
chr3 (320-378)||(22938532-22938590)
chr3 (179-249)||(41574978-41575048)
chr3 (179-249)||(43744466-43744536)
chr3 (30-92)||(45727081-45727143)
chr3 (179-249)||(54830915-54830985)
chr3 (303-368)||(49366246-49366311)
chr3 (178-230)||(45726899-45726951)
chr3 (17-93)||(54831114-54831190)
chr3 (30-93)||(542655-542718)
chr3 (182-249)||(25558445-25558512)
chr3 (190-249)||(47243778-47243837)
chr3 (320-378)||(3383564-3383622)
chr3 (41-137)||(25592077-25592172)
chr3 (39-137)||(788534-788631)
chr3 (17-93)||(8324679-8324755)
chr3 (17-93)||(25558641-25558717)
chr3 (17-93)||(41574775-41574851)
chr3 (31-91)||(46868540-46868600)
chr3 (188-248)||(27715897-27715959)
chr3 (17-92)||(47599988-47600063)
chr3 (39-93)||(3136553-3136607)
chr3 (17-67)||(47244002-47244052)
chr3 (39-93)||(53516643-53516697)
chr3 (196-249)||(52458199-52458252)
[»] chr1 (50 HSPs)
chr1 (179-251)||(42647489-42647561)
chr1 (309-380)||(3430557-3430627)
chr1 (17-137)||(42647644-42647763)
chr1 (179-251)||(31210711-31210783)
chr1 (179-251)||(36672021-36672093)
chr1 (179-251)||(5800007-5800079)
chr1 (182-250)||(6079837-6079905)
chr1 (179-246)||(43025307-43025374)
chr1 (178-249)||(48354954-48355025)
chr1 (18-93)||(29451055-29451130)
chr1 (24-91)||(29852235-29852302)
chr1 (179-249)||(12979677-12979747)
chr1 (179-249)||(26921917-26921987)
chr1 (179-248)||(33196509-33196578)
chr1 (17-93)||(12979873-12979949)
chr1 (17-93)||(22667304-22667380)
chr1 (179-235)||(28712139-28712195)
chr1 (179-251)||(39628070-39628142)
chr1 (179-230)||(22667505-22667556)
chr1 (179-230)||(41085616-41085667)
chr1 (179-230)||(41090384-41090435)
chr1 (179-249)||(41903190-41903260)
chr1 (179-249)||(45427370-45427440)
chr1 (17-93)||(11444310-11444386)
chr1 (320-380)||(42795382-42795442)
chr1 (18-93)||(33485968-33486043)
chr1 (18-93)||(39627868-39627943)
chr1 (179-230)||(46153473-46153524)
chr1 (179-249)||(11444512-11444582)
chr1 (39-93)||(33098766-33098820)
chr1 (17-128)||(26921715-26921825)
chr1 (179-224)||(46152419-46152464)
chr1 (17-69)||(33196304-33196356)
chr1 (17-93)||(36672220-36672296)
chr1 (27-78)||(2247351-2247402)
chr1 (18-93)||(28711938-28712013)
chr1 (30-93)||(41903386-41903449)
chr1 (19-90)||(47900979-47901049)
chr1 (39-93)||(2620965-2621019)
chr1 (39-93)||(26011003-26011057)
chr1 (17-90)||(5800209-5800282)
chr1 (24-93)||(29953718-29953787)
chr1 (317-378)||(41143793-41143854)
chr1 (53-128)||(45427201-45427275)
chr1 (179-219)||(33486171-33486211)
chr1 (38-93)||(35873996-35874052)
chr1 (41-93)||(41541541-41541593)
chr1 (17-93)||(46152217-46152293)
chr1 (17-93)||(46153271-46153347)
chr1 (178-230)||(51402025-51402077)
[»] chr5 (44 HSPs)
chr5 (18-93)||(33902124-33902199)
chr5 (179-251)||(14575715-14575787)
chr5 (179-251)||(14721145-14721217)
chr5 (182-251)||(35777627-35777696)
chr5 (17-93)||(43167233-43167309)
chr5 (178-249)||(7456588-7456659)
chr5 (325-378)||(38353676-38353729)
chr5 (17-93)||(231789-231865)
chr5 (179-251)||(15264134-15264206)
chr5 (17-93)||(32092372-32092448)
chr5 (179-251)||(41609178-41609250)
chr5 (179-251)||(43167036-43167108)
chr5 (32-93)||(7456262-7456323)
chr5 (180-249)||(14054505-14054574)
chr5 (18-93)||(36184028-36184102)
chr5 (179-251)||(972241-972313)
chr5 (179-230)||(231612-231663)
chr5 (312-369)||(15311630-15311687)
chr5 (17-93)||(14054704-14054780)
chr5 (28-76)||(21946040-21946088)
chr5 (17-93)||(33654868-33654944)
chr5 (18-93)||(972440-972515)
chr5 (190-249)||(32092175-32092234)
chr5 (178-249)||(36183823-36183894)
chr5 (185-235)||(7456462-7456512)
chr5 (179-224)||(664979-665024)
chr5 (32-93)||(35682385-35682446)
chr5 (17-93)||(14575512-14575588)
chr5 (17-93)||(35777420-35777496)
chr5 (17-93)||(41609376-41609452)
chr5 (38-78)||(41802413-41802453)
chr5 (38-93)||(9913249-9913304)
chr5 (38-93)||(13091204-13091259)
chr5 (38-93)||(29744193-29744248)
chr5 (39-93)||(13795333-13795387)
chr5 (39-93)||(37431411-37431465)
chr5 (38-78)||(9589514-9589554)
chr5 (17-93)||(11489628-11489704)
chr5 (179-227)||(11489830-11489878)
chr5 (21-93)||(14721345-14721417)
chr5 (38-78)||(14967537-14967577)
chr5 (17-93)||(15264334-15264410)
chr5 (26-78)||(21051369-21051421)
chr5 (38-93)||(34259830-34259886)
[»] chr6 (27 HSPs)
chr6 (309-465)||(8484631-8484785)
chr6 (182-251)||(2197875-2197944)
chr6 (179-251)||(26611561-26611633)
chr6 (17-137)||(2198030-2198149)
chr6 (179-249)||(5078242-5078312)
chr6 (179-249)||(22734799-22734869)
chr6 (179-249)||(32715699-32715769)
chr6 (17-93)||(3448140-3448216)
chr6 (179-247)||(10091583-10091651)
chr6 (17-93)||(10091778-10091854)
chr6 (320-465)||(10324434-10324579)
chr6 (26-93)||(17697997-17698063)
chr6 (31-93)||(24215306-24215368)
chr6 (179-249)||(33610943-33611013)
chr6 (17-128)||(33610740-33610850)
chr6 (179-235)||(3448487-3448543)
chr6 (21-93)||(22734993-22735065)
chr6 (179-235)||(31394296-31394352)
chr6 (17-93)||(32715894-32715970)
chr6 (39-93)||(30020418-30020472)
chr6 (20-93)||(31394480-31394553)
chr6 (17-93)||(5078438-5078514)
chr6 (41-93)||(6265006-6265058)
chr6 (32-76)||(20469090-20469134)
chr6 (17-93)||(26611759-26611835)
chr6 (24-78)||(27109052-27109106)
chr6 (24-78)||(27150849-27150903)
[»] scaffold0059 (2 HSPs)
scaffold0059 (179-251)||(70935-71007)
scaffold0059 (17-93)||(70733-70809)
[»] scaffold0008 (2 HSPs)
scaffold0008 (179-251)||(263068-263140)
scaffold0008 (17-93)||(262864-262940)
[»] scaffold0190 (2 HSPs)
scaffold0190 (179-251)||(5941-6013)
scaffold0190 (17-93)||(5737-5813)
[»] scaffold0005 (1 HSPs)
scaffold0005 (27-79)||(271019-271071)


Alignment Details
Target: chr2 (Bit Score: 173; Significance: 1e-92; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 178 - 628
Target Start/End: Complemental strand, 15354618 - 15354185
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatatttgtattctnnnnnnnnntacttaaact 277  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||| ||||||         ||||||||||    
T  15354618 gttgaattttgctttgccgacacttttgaaaaataaaatatagttattataattgtaaatgatagaaaatatttttattctaaaaaaaa-tacttaaact 15354520  T
Q  278 attaatttaagggaaatgttaaatagtgctc-cagagcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaa 376  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||||| |||| |||||||||||| || |||||||||||||||||||||||||||||||    
T  15354519 attaatttaagggaaatgctaactagtgctctcagagcaatgattaatgaagtaaatatagtaattttacattggaacttgtgcattcaacttctcaaaa 15354420  T
Q  377 gtatnnnnnnnc---tgagattttcaacctaaaactttannnnnnnggtttccttaaccattaccctaagggcatcggttaacataacccttaatttaaa 473  Q
    ||||           ||| |||||||||||||||||||        | |||||||||||||| ||||||   ||||||||| ||||| ||||||||||||    
T  15354419 gtataaaaaaaaaaatgatattttcaacctaaaactttcttttttag-tttccttaaccattgccctaaaaacatcggttagcataatccttaatttaaa 15354321  T
Q  474 tataggtataccggtgcactcgaattttttgagtgcactcgaattttttgagtgcaccgtaaaaattgcctttttatatatatcaacatagttagcttct 573  Q
    |||| |||||||                   ||| ||||| ||||||| || | |||| || ||||| ||||||||||||||||||||||||||||||||    
T  15354320 tataagtatacc-------------------agtacactcaaatttttcgaatacaccttagaaattacctttttatatatatcaacatagttagcttct 15354240  T
Q  574 gttaaaaataatcaacaatgttggctcaagtttctatagtcttctcctttctcta 628  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15354239 gttaaaaataatcaacaatgttggctcaagtttctataatcttctcctttctcta 15354185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 15354799 - 15354662
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaat-aaagaactatttgtcgacttttatattttnnnnnnntattatttcctaaga 115  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||    
T  15354799 gtacacctgtttcataaatcaataaattaactatcatttttatgtaataaaagaactatttgtcgacttttatatttt-aaaaaatattatttcctaaga 15354701  T
Q  116 acaaacatcatttaattgtttacattttgtcgaataaaa 154  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15354700 acaaacatcatttaattgtttacattttgtcgaataaaa 15354662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 320 - 380
Target Start/End: Original strand, 37357269 - 37357329
Alignment:
Q  320 ttaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagtat 380  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37357269 ttaaggaagcaaatatagtaatcttgcattgaaacttgtgcattcaacttctcaaaagtat 37357329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 36430855 - 36430927
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  36430855 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 36430927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 39307175 - 39307103
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  39307175 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 39307103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 44544209 - 44544137
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  44544209 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 44544137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 22595103 - 22594984
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 116  Q
    ||||| |||||| |||||||||||| ||||| ||||||||||||||| ||| | |||||||||||||||||||||||       ||||||||| ||||||    
T  22595103 gtacatctgtttcataaatcaataagttaacgatcatttttatgtaaaaaaaagctatttgtcgacttttatatttt-agaaaatattatttcataagaa 22595005  T
Q  117 caaacatcatttaattgttta 137  Q
     ||| ||||||| ||||||||    
T  22595004 aaaatatcatttcattgttta 22594984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 3911388 - 3911319
Alignment:
Q  182 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  3911388 aattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 3911319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 325618 - 325546
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||| || ||||||| | ||||||||||  |||||||||||||||||||    
T  325618 ttgaattttgctttgccgacacttttgaaaaataaaataaaattattataattataaatgatagaaaatattt 325546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 13118980 - 13118908
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||| || ||||||| | ||||||||||  |||||||||||||||||||    
T  13118980 ttgaattttgctttgccgacacttttgaaaaataaaataaaattattataattataaatgatagaaaatattt 13118908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 22594902 - 22594829
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||| ||| ||| ||||||||| |||||||| ||||||||||| |||||| |||||||||||||    
T  22594902 gttgaattttgcttcgccaacatttttgagaaataaaatattgttattataattgtaaataatagaaaatattt 22594829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 13507294 - 13507369
Alignment:
Q  18 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||| ||| |||||||||||| ||||  |||||||||||||||||||||  ||||| ||||||||||||||||    
T  13507294 tacacctatttcataaatcaataagttaatgatcatttttatgtaataaagagatatttatcgacttttatatttt 13507369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 315 - 378
Target Start/End: Original strand, 34353261 - 34353324
Alignment:
Q  315 aatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 378  Q
    |||| |||||||| ||||||||||||| |||||||| ||||||||||||||||| |||||||||    
T  34353261 aatggttaaggaaccaaatatagtaattttgcattgaaacttgtgcattcaactcctcaaaagt 34353324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 2640078 - 2640008
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  2640078 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 2640008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 29943721 - 29943651
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| ||||||||||||||||| || ||||||||| |||||||||| |||| | |||||||||||    
T  29943721 ttgaattttgatttgccgacacttttgaaaaataaaatataattattataattgtaactaatagaaaatat 29943651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 36023751 - 36023685
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaa 245  Q
    |||||||||||||||||||||||||||| || ||||||||  ||||||||||  |||||||||||||    
T  36023751 ttgaattttgctttgccgacacttttgaaaaataaaatatgattattataattataaatgatagaaa 36023685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 36054108 - 36054038
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  36054108 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 36054038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 2640284 - 2640208
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||||||||| ||| | ||||||||||||||||||| || ||||| || |||||||||||||    
T  2640284 gtacacctatttcataaatcaataagttatcgatcatttttatgtaataaataaatatttatcaacttttatatttt 2640208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 6279779 - 6279835
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaa 235  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||    
T  6279779 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaa 6279835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 36054312 - 36054236
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  36054312 gtacacctatttcataaatcaataagttatcaatcatttttatgtaataaagagatatttatcaacttttatatttt 36054236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 41515872 - 41515948
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| |||||||||||||||| ||| | |||||||||| ||||||||||  ||||| || |||||||||||||    
T  41515872 gtacacctattttataaatcaataagttatcgatcatttttaagtaataaagagatatttatcaacttttatatttt 41515948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 41516074 - 41516146
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||||||  |||   |||||||||||||    
T  41516074 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattataaccaatagaaaatattt 41516146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 13507496 - 13507566
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||| ||||||||||||||||| || ||||||||| |  ||||||| |||| |||||||||||||||    
T  13507496 ttgaattttgatttgccgacacttttgaaaaataaaatataat--ttataattgtaattgatagaaaatattt 13507566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 29943922 - 29943846
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||| ||||||| ||||| |||||||||||||||||||||  | | | ||||||||||||||||    
T  29943922 gtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgacttttatatttt 29943846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 6588296 - 6588351
Alignment:
Q  38 ataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||| || ||||||||| ||||||||| |||||||||| |||||||||||    
T  6588296 ataaattaacaattatttttatgaaataaagaattatttgtcgagttttatatttt 6588351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 15507144 - 15507089
Alignment:
Q  313 gcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaact 368  Q
    ||||||||||| |||||||||||| |||| ||||||| ||||||||||||| ||||    
T  15507144 gcaatgattaaagaagcaaatataataattttgcattagaacttgtgcatttaact 15507089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 467 - 508
Target Start/End: Original strand, 13507600 - 13507641
Alignment:
Q  467 atttaaatataggtataccggtgcactcgaattttttgagtg 508  Q
    |||||||||||||||||||||| ||||| |||||||||||||    
T  13507600 atttaaatataggtataccggtacactcaaattttttgagtg 13507641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 19268628 - 19268681
Alignment:
Q  40 aaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| |||||||||||| |||||||| |||||||||||  ||||||||||    
T  19268628 aaattaacgatcatttttatgaaataaagagctatttgtcgatatttatatttt 19268681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 40051261 - 40051330
Alignment:
Q  24 tgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||| ||||| ||||||||||| || ||||||||| |||||||| | ||||||  |||||||||||||    
T  40051261 tgttttttaaattaataaattaacgattatttttatggaataaagagcgatttgtgaacttttatatttt 40051330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 3911593 - 3911517
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| ||||||| |||| ||||| || ||||||| || |||||||  ||||| ||||||||||||||||    
T  3911593 gtacacctatttcataaatctataagttaacgataatttttacgtgataaagagatatttatcgacttttatatttt 3911517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 128
Target Start/End: Original strand, 5155746 - 5155843
Alignment:
Q  30 ataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaacaaacatcattt 128  Q
    |||||||||||  ||||  || ||||||||||||||||||  ||||||| ||||||||||||||       ||||||||| |||||| |||||||||||    
T  5155746 ataaatcaatacgttaatgattatttttatgtaataaagagatatttgttgacttttatatttt-agaaaatattatttcataagaaaaaacatcattt 5155843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 6279574 - 6279649
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattt 92  Q
    ||||| || ||| |||||||||||| |||   |||||||||||||||||||||  ||||| || ||||||||||||    
T  6279574 gtacatctatttcataaatcaataagttattgatcatttttatgtaataaagagatatttatcaacttttatattt 6279649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 471
Target Start/End: Original strand, 34353364 - 34353415
Alignment:
Q  420 ggtttccttaaccattaccctaagggcatcggttaacataacccttaattta 471  Q
    |||||||||||||||| |||||| |||| |||||| ||||||||| ||||||    
T  34353364 ggtttccttaaccattgccctaaaggcaccggttagcataaccctaaattta 34353415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 6513323 - 6513377
Alignment:
Q  39 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  6513323 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 6513377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 13450677 - 13450623
Alignment:
Q  31 taaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttt 85  Q
    ||||||||||||||||  || ||||||||  |||||||| |||||||||||||||    
T  13450677 taaatcaataaattaatgataatttttattaaataaagagctatttgtcgacttt 13450623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 20212214 - 20212268
Alignment:
Q  39 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  20212214 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 20212268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 33413051 - 33412997
Alignment:
Q  39 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| | ||||||| ||||||||||||||||| ||  ||||||||||    
T  33413051 taaattaactattagttttatggaataaagaactatttgttgatatttatatttt 33412997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 34438248 - 34438302
Alignment:
Q  39 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  34438248 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 34438302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 37909703 - 37909649
Alignment:
Q  39 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  37909703 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 37909649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 19203929 - 19203860
Alignment:
Q  24 tgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||| ||| ||||||||||||  || ||||||||| |||||| |  |||||||||| |||||||||||    
T  19203929 tgttttgtaattcaataaattaatgataatttttatgaaataaatagttatttgtcgatttttatatttt 19203860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 44544413 - 44544344
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgactttt 86  Q
    |||||||| ||||||||||| |||| ||||| || ||||| |||| |||||||  ||||| |||||||||    
T  44544413 gtacacctattttataaatctataagttaacgataattttaatgtgataaagagatatttatcgactttt 44544344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 13119184 - 13119108
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| ||||||  |||| ||||  || |||||||||| |||||||  ||||| ||||||||||||||||    
T  13119184 gtacacctatttcataaatatataagttaaagataatttttatgtgataaagagatatttatcgacttttatatttt 13119108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 508
Target Start/End: Complemental strand, 22594798 - 22594754
Alignment:
Q  464 ttaatttaaatataggtataccggtgcactcgaattttttgagtg 508  Q
    ||||||||||||||||| ||||||| ||||| ||||||| |||||    
T  22594798 ttaatttaaatataggtgtaccggtacactcaaatttttcgagtg 22594754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 36023953 - 36023878
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| ||||||| | || ||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  36023953 gtacacctatttcataaatcta-aagttaacgataatttttatgtgataaagagatatttatcgacttttatatttt 36023878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 39307378 - 39307302
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||| | ||| ||||| | |||| ||||| || |||||||||| ||||| || ||||| ||||||||||||||||    
T  39307378 gtacacatatttcataaaaccataagttaacgataatttttatgtgataaataaatatttatcgacttttatatttt 39307302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 1e-36; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 39226985 - 39226867
Alignment:
Q  18 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaac 117  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||       ||||||||| |||||||    
T  39226985 tacacctgttttataaatcaataaattaactatcatttttacgtaataaagaattatttgtcgacttttata-tttaaaaaaatattatttcataagaac 39226887  T
Q  118 aaacatcatttaattgttta 137  Q
    ||||||||||||||||||||    
T  39226886 aaacatcatttaattgttta 39226867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 313 - 466
Target Start/End: Original strand, 46777273 - 46777424
Alignment:
Q  313 gcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagtatnnnnnnnctgagattttcaacctaaaacttta 412  Q
    |||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||||| ||        ||| ||||||||| |||||||||     
T  46777273 gcaatggttaagaaaacaaatacagtaatcttgcattggaacttgtgcattcaacttctcaaaagcataaaaag--tgatattttcaacataaaactttc 46777370  T
Q  413 nnnnnnnggtttccttaaccattaccctaagggcatcggttaacataaccctta 466  Q
           |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  46777371 tctttttggtttccttaaccattgccctaagggcaccggttaacataaccctta 46777424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 428080 - 428152
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  428080 ttgaattttgcttcgccgacacttttgagaaataaaatatagttattataattgtaaatgatagaaaatattt 428152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 37118374 - 37118492
Alignment:
Q  18 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaac 117  Q
    ||||||| ||| |||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||       ||||||||| ||||||     
T  37118374 tacacctatttcataaatcaataaattaacgatcatttttatgtaataaagaaatatttatcgacttttatatttt-agaaaatattatttcataagaaa 37118472  T
Q  118 aaacatcatttaattgttta 137  Q
    ||||||||||| ||| ||||    
T  37118473 aaacatcatttcattcttta 37118492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 314 - 380
Target Start/End: Original strand, 36016439 - 36016505
Alignment:
Q  314 caatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagtat 380  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  36016439 caatggttaaggaagcaaatatagtaatattgcatcggaacttgtgcattcaacttctcaaaagtat 36016505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 968741 - 968813
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  968741 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 968813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 19503159 - 19503235
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||||| || ||||| |||||||||| |||| |||||||||||||||||||||||||||||    
T  19503159 gtacacctgtttcataaatcaaaaagttaacgatcatttttacgtaaaaaagaactatttgtcgacttttatatttt 19503235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 38034965 - 38035037
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  38034965 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 38035037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 15877238 - 15877165
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||| ||| ||| ||||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  15877238 gttgaattttgcttcgccaacatttttgagaaataaaatattgttattataattgtaaatgatagaaaatattt 15877165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 19503360 - 19503433
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||| ||| ||| ||||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  19503360 gttgaattttgcttcgccaacatttttgagaaataaaatattgttattataattgtaaatgatagaaaatattt 19503433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 15877441 - 15877365
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| |||||| ||||| ||||| ||||||||||||||| ||||| |||||||| ||||||||||||||    
T  15877441 gtacacctgtttcataaattaataagttaacgatcatttttatgtaaaaaagagctatttgttgacttttatatttt 15877365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 20883789 - 20883717
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||||||||||||| |||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  20883789 ttgaattttgctttgccgatacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 20883717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 46880108 - 46880179
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    ||||||||||| |||||||||||||||||||| ||||||||| ||||||||||  ||| |||||||||||||    
T  46880108 gttgaattttgatttgccgacacttttgagaaataaaatataattattataattataactgatagaaaatat 46880179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 35567084 - 35566998
Alignment:
Q  7 agtttctaccgtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||||| ||||| |||||| |||||| ||||| | ||| |||||||||||||||||||||  |||||| |||||||||||||||    
T  35567084 agtttctacggtacatctgtttcataaatgaataagtaaacgatcatttttatgtaataaagagttatttgccgacttttatatttt 35566998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 182 - 251
Target Start/End: Original strand, 24189295 - 24189364
Alignment:
Q  182 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||| ||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  24189295 aattttgttttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 24189364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 24203234 - 24203124
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 116  Q
    |||||||| ||| |||||||||||||||||  || ||||||||||||||||||  ||||||| ||||||||||||||       ||||||||| ||||||    
T  24203234 gtacacctatttcataaatcaataaattaatgattatttttatgtaataaagagatatttgttgacttttatatttt-agaaaatattatttcataagaa 24203136  T
Q  117 caaacatcattt 128  Q
     |||||||||||    
T  24203135 aaaacatcattt 24203124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 24009159 - 24009087
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||| ||||||||||||| || ||||||||| ||||||| ||  |||||||||||||||||||    
T  24009159 ttgaattttgcttttccgacacttttgaaaaataaaatataattattattattataaatgatagaaaatattt 24009087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 29273349 - 29273273
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||||||||  | ||| ||||| ||||| ||||||||||||||| ||||| |||||||||||||||||||||||    
T  29273349 gtacacctgtttcgtgaattaataatttaacgatcatttttatgtaacaaagagctatttgtcgacttttatatttt 29273273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 29982298 - 29982370
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||||||| | ||||| |||||| || |||||||||||||||||||| |||||| |||||||||||||    
T  29982298 ttgaattttgcttcgacgacatttttgataaataaaatatagttattataattgtaaataatagaaaatattt 29982370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 45430254 - 45430326
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||||||| ||| ||| |||| |||| |||||||| ||||||||||| ||||||||||||||||||||    
T  45430254 ttgaattttgcttcgccaacatttttaagaaataaaatattgttattataattgtaaatgatagaaaatattt 45430326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 27275941 - 27275871
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  27275941 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 27275871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 29982116 - 29982215
Alignment:
Q  37 aataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaacaaacatcatttaattgttt 136  Q
    ||||| ||||| ||||||||||||||| ||||| |||||||||||||||||||||||       |||||||| | ||||| ||||||||||| |||||||    
T  29982116 aataatttaacaatcatttttatgtaacaaagagctatttgtcgacttttatatttt-agaaaatattattttcaaagaaaaaacatcatttcattgttt 29982214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 30819614 - 30819544
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| ||||| |||||||||||||| ||||||||| ||||||||||  ||| |||||||||||||    
T  30819614 ttgaattttgatttgcggacacttttgagaaataaaatataattattataattataactgatagaaaatat 30819544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 39926039 - 39926109
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| ||||||||||||||||| || ||||||||| |||||||||| |||| | |||||||||||    
T  39926039 ttgaattttgatttgccgacacttttgaaaaataaaatataattattataattgtaactaatagaaaatat 39926109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 28501581 - 28501654
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||| ||||||| ||||||||| ||||||||   ||||||||  ||||||||||||||||||||    
T  28501581 gttgaattttgcttcgccgacatttttgagaaataaaatattagtattataactgtaaatgatagaaaatattt 28501654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 315 - 376
Target Start/End: Complemental strand, 41742478 - 41742417
Alignment:
Q  315 aatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaa 376  Q
    |||| ||||| ||| ||||||||||| |||||| ||||||||||||||||||||||||||||    
T  41742478 aatggttaagaaagtaaatatagtaagcttgcagtggaacttgtgcattcaacttctcaaaa 41742417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 29273154 - 29273082
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||||||| | | | |||||||| || |||||||||||||||||||| |||||| |||||||||||||    
T  29273154 ttgaattttgcttcgacaatacttttgataaataaaatatagttattataattgtaaataatagaaaatattt 29273082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 427877 - 427952
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattt 92  Q
    ||||| |||||| |||||||||||| ||||  ||| ||||||||||| |||||  |||||||||||||||||||||    
T  427877 gtacatctgtttcataaatcaataagttaaagatcctttttatgtaacaaagagttatttgtcgacttttatattt 427952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 249
Target Start/End: Original strand, 37118601 - 37118652
Alignment:
Q  198 cacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  37118601 cacttttgagaaataaaatataattattataattgtaaatgatagaaaatat 37118652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 24203029 - 24202959
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| ||||| |||||||||||||| |||||||||  |||||||||  ||| |||||||||||||    
T  24203029 ttgaattttgatttgcggacacttttgagaaataaaatataactattataattataactgatagaaaatat 24202959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 309 - 378
Target Start/End: Complemental strand, 41467637 - 41467568
Alignment:
Q  309 cagagcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 378  Q
    |||||||||| ||||| || ||||||||||||||  | |||  |||||||||||||||||||||||||||    
T  41467637 cagagcaatggttaagaaaacaaatatagtaatcccgtattaaaacttgtgcattcaacttctcaaaagt 41467568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 46879909 - 46879986
Alignment:
Q  17 gtacacctgttttataaatcaataaa-ttaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||| | ||| ||||||||||||  ||||| || ||||||||||||||||||  ||||||||||||||||||||||    
T  46879909 gtacacttatttcataaatcaataaggttaacgattatttttatgtaataaagatatatttgtcgacttttatatttt 46879986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 20883991 - 20883915
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||||||||||| |||| ||||| || | |||||||| |||||||  ||||| ||||||||||||||||    
T  20883991 gtacacctattttataaatctataagttaacgataacttttatgtgataaagagatatttatcgacttttatatttt 20883915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 24189090 - 24189166
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| ||||||| |||| ||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  24189090 gtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgacttttatatttt 24189166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 27276144 - 27276068
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||||||||| ||| | ||||||||| |||||||||||  ||||| || |||||||||||||    
T  27276144 gtacacctatttcataaatcaataagttatcgatcatttttctgtaataaagagatatttatcaacttttatatttt 27276068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 30819816 - 30819740
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||| || ||| |||||||||||| ||||  || ||||||||||||||||||  ||||||| ||||||||||||||    
T  30819816 gtacatctatttcataaatcaataagttaatgattatttttatgtaataaagagatatttgttgacttttatatttt 30819740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 31603434 - 31603382
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataata 231  Q
    |||||||||||||||||||||||||||| || || |||||| |||||||||||    
T  31603434 ttgaattttgctttgccgacacttttgaaaaatataatataattattataata 31603382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 35566874 - 35566806
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaa 246  Q
    |||||||||||||||  | |  |||||||||| |||||| ||||||||||||| |||||||||||||||    
T  35566874 gttgaattttgctttaacaatgcttttgagaaataaaatttagttattataattgtaaatgatagaaaa 35566806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 37001038 - 37001090
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaaga 69  Q
    |||||||| ||| |||| ||||||||||||| |||||||||||||||||||||    
T  37001038 gtacacctatttcataattcaataaattaacaatcatttttatgtaataaaga 37001090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 37002363 - 37002435
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||| ||||||||||||||||| || |||| |||| |||||||||| |||| | |||||| ||||||    
T  37002363 ttgaattttgatttgccgacacttttgaaaaataaagtataattattataattgtaagtaatagaatatattt 37002435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 39925834 - 39925910
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||| ||||||| ||||| |||||||||||||||||||||  | | | ||||||||||||||||    
T  39925834 gtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgacttttatatttt 39925910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 45704540 - 45704616
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||| ||||||| ||||| |||||||||||||||||||||  | | | ||||||||||||||||    
T  45704540 gtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgacttttatatttt 45704616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 45430073 - 45430148
Alignment:
Q  18 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||||||| |||||| ||||| ||| |  |||||||||||||| |||||  ||||||| ||||||||||||||    
T  45430073 tacacctgtttcataaattaataagttagcggtcatttttatgtaaaaaagagttatttgttgacttttatatttt 45430148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 48900552 - 48900627
Alignment:
Q  18 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||| ||| |||||||||||| | ||  || ||||||||||||||||||  ||||||| ||||||||||||||    
T  48900552 tacacctatttcataaatcaataagtaaatgattatttttatgtaataaagagatatttgttgacttttatatttt 48900627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 39226783 - 39226741
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatag 220  Q
    |||||||||||||| ||||||||||||||||| ||||||||||    
T  39226783 gttgaattttgcttcgccgacacttttgagaaataaaatatag 39226741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 46919875 - 46919814
Alignment:
Q  31 taaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||||||||||||| || ||||||||| ||||||||| ||||||| ||||||||| ||||    
T  46919875 taaatcaataaattaacgattatttttatgaaataaagaattatttgt-gacttttatgtttt 46919814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 8294414 - 8294345
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaat 247  Q
    ||||||||||| ||||||||||||||||| || ||||||||| |||| ||||  ||||  ||||||||||    
T  8294414 gttgaattttgatttgccgacacttttgaaaaataaaatataattatcataaatgtaacagatagaaaat 8294345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 41809551 - 41809490
Alignment:
Q  32 aaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||| ||||||||||||||| ||||||| ||||||||| ||||||| ||  ||||||||||    
T  41809551 aaatctataaattaactatcaattttatgaaataaagaattatttgttgatatttatatttt 41809490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 38034762 - 38034838
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||| | ||| ||||||| |||| ||||| || |||||||||| ||||| || ||||| ||||||||||||||||    
T  38034762 gtacacatatttcataaatctataagttaacaataatttttatgtgataaacaaatatttatcgacttttatatttt 38034838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 40602555 - 40602511
Alignment:
Q  197 acacttttgagaagtaaaatatagttattataatagtaaatgata 241  Q
    ||||||| ||||| |||||||||||||||||||| ||||||||||    
T  40602555 acactttcgagaaataaaatatagttattataattgtaaatgata 40602511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 42975241 - 42975186
Alignment:
Q  38 ataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||||||||| ||||||||| |||||| |||||||||| ||  ||||||||||    
T  42975241 ataaattaactattatttttatgaaataaaaaactatttgttgatatttatatttt 42975186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 45704757 - 45704816
Alignment:
Q  190 tttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    ||||||||||||||| | || ||||||||| |||||||||| |||| | |||||||||||    
T  45704757 tttgccgacacttttaaaaaataaaatataattattataattgtaactaatagaaaatat 45704816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 20438877 - 20438931
Alignment:
Q  39 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  20438877 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 20438931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 31482730 - 31482680
Alignment:
Q  26 ttttataaatcaataaattaactatcatttttatgtaataaagaactattt 76  Q
    ||||| ||||| ||||||||||||| ||||||||| |||||||| ||||||    
T  31482730 ttttaaaaatctataaattaactattatttttatgaaataaagagctattt 31482680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 8770424 - 8770461
Alignment:
Q  32 aaatcaataaattaactatcatttttatgtaataaaga 69  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  8770424 aaatctataaattaactatcatttttatgaaataaaga 8770461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 11486347 - 11486303
Alignment:
Q  32 aaatcaataaattaactatcatttttatgtaataaagaactattt 76  Q
    ||||| |||||||||||||| |||||||| |||||||| ||||||    
T  11486347 aaatctataaattaactatcttttttatgaaataaagagctattt 11486303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 37089004 - 37088968
Alignment:
Q  31 taaatcaataaattaactatcatttttatgtaataaa 67  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  37089004 taaatcaataaattaacaatcatttttatgaaataaa 37088968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 3e-25; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 314 - 463
Target Start/End: Original strand, 32286031 - 32286178
Alignment:
Q  314 caatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagtatnnnnnnnctgagattttcaacctaaaactttan 413  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||        ||| |||||||||||||||||||      
T  32286031 caatgattaaggaagcaaatataatatttttgcattggaacttgtgcattcaacttctcaaaagtataaaaag--tgatattttcaacctaaaactttct 32286128  T
Q  414 nnnnnnggtttccttaaccattaccctaagggcatcggttaacataaccc 463  Q
          |||||| ||||||||| ||||||||||| | |||| ||||||||    
T  32286129 ttttttggtttctttaaccattgccctaagggcaccagttagcataaccc 32286178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 43460717 - 43460598
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 116  Q
    |||||||||||| ||||||||||||  |||| ||||||||||||||| ||||| |||||||||||||||||||||||       ||||||||| ||||||    
T  43460717 gtacacctgtttcataaatcaataagctaacgatcatttttatgtaaaaaagagctatttgtcgacttttatatttt-agaaaatattatttcataagaa 43460619  T
Q  117 caaacatcatttaattgttta 137  Q
     ||| ||||||| ||||||||    
T  43460618 aaaatatcatttcattgttta 43460598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 9179031 - 9179103
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  9179031 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 9179103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 2164916 - 2164844
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||| | || ||||||||| ||||||||||  |||||||||||||||||||    
T  2164916 ttgaattttgctttgccgacacttttaaaaaataaaatataattattataattataaatgatagaaaatattt 2164844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 4471685 - 4471757
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||||||| | |||||||||||| || |||||||||||||||||||| |||||| |||||||||||||    
T  4471685 ttgaattttgcttcgacgacacttttgataaataaaatatagttattataattgtaaataatagaaaatattt 4471757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 32718994 - 32719070
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||| ||| ||| |||||| ||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  32718994 gtactcctatttcataaattaataagttaacgatcatttttatgtaaaaaagaactatttgtcgacttttatatttt 32719070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 36035682 - 36035610
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||||||||| | |||||||||| || |||||||||||||||||||| |||||| |||||||||||||    
T  36035682 ttgaattttgctttgacaacacttttgataaataaaatatagttattataattgtaaataatagaaaatattt 36035610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 13197665 - 13197594
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    ||||||||||| |||||||||||||||||||| ||||||||| |||||||||| |||| | |||||||||||    
T  13197665 gttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaatttatagaaaatat 13197594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 4471483 - 4471602
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 116  Q
    ||||||||||||  | ||| ||||| ||||| ||||||||||||||| ||||| |||||||||||||||||||||||       |||||||| | |||||    
T  4471483 gtacacctgtttcgtgaattaataatttaacgatcatttttatgtaacaaagagctatttgtcgacttttatatttt-agaaaatattattttcaaagaa 4471581  T
Q  117 caaacatcatttaattgttta 137  Q
     ||||||||||| ||||||||    
T  4471582 aaaacatcatttcattgttta 4471602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 7087792 - 7087722
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| |||| | |||||||||||    
T  7087792 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaactaatagaaaatat 7087722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 12980179 - 12980114
Alignment:
Q  181 gaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaa 246  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||  ||||| ||||||||    
T  12980179 gaattttgctttgccgacacttttaagaaataaaatatagttattataattataaataatagaaaa 12980114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 43460515 - 43460442
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||| ||| ||| ||||||||| |||||||| ||||||||||  ||||||||||||||||||||    
T  43460515 gttgaattttgcttcgccaacatttttgagaaataaaatattgttattataactgtaaatgatagaaaatattt 43460442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 12980378 - 12980304
Alignment:
Q  19 acacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||| ||| |||||||| ||| ||||| |||||||||||||||||||||  ||||||||| ||||||||||||    
T  12980378 acacctatttcataaatcattaagttaacgatcatttttatgtaataaagagatatttgtcggcttttatatttt 12980304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 24247599 - 24247529
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  24247599 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 24247529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 31940578 - 31940508
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| ||||||||||||||||| || ||||||||| |||||||||| |||| | |||||||||||    
T  31940578 ttgaattttgatttgccgacacttttgaaaaataaaatataattattataattgtaactaatagaaaatat 31940508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 31940791 - 31940705
Alignment:
Q  7 agtttctaccgtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||||| |||||||| ||| |||| ||||||| ||||| |||||||||||||||||||||  | | | ||||||||||||||||    
T  31940791 agtttctacggtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgacttttatatttt 31940705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 36496387 - 36496457
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| ||||||||||||||||| || ||||||||| |||||||||| |||| | |||||||||||    
T  36496387 ttgaattttgatttgccgacacttttgaaaaataaaatataattattataattgtaactaatagaaaatat 36496457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 43065166 - 43065236
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  43065166 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 43065236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 40681165 - 40681226
Alignment:
Q  32 aaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||||||| |||| ||| |||||||| ||||||||||||||| ||||||||||||||||    
T  40681165 aaatcaataaactaacaatcgtttttatgaaataaagaactatttatcgacttttatatttt 40681226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 33628729 - 33628653
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  33628729 gtacacctatttcataaatcaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 33628653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 16871807 - 16871858
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataat 230  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  16871807 ttgaattttgatttgccgacacttttgagaaataaaatataattattataat 16871858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 33628524 - 33628457
Alignment:
Q  182 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    ||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  33628524 aattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 33628457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 3642839 - 3642769
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| | ||| |||||||||||||| ||||||||| ||||||||||  ||| |||||||||||||    
T  3642839 ttgaattttgatctgcggacacttttgagaaataaaatataattattataattataactgatagaaaatat 3642769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 320 - 378
Target Start/End: Complemental strand, 45197238 - 45197180
Alignment:
Q  320 ttaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 378  Q
    ||||||||||| ||||| |||||| |||||| |||||||||||||||||| ||||||||    
T  45197238 ttaaggaagcagatataataatctcgcattgaaacttgtgcattcaacttttcaaaagt 45197180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 313 - 378
Target Start/End: Complemental strand, 7643810 - 7643745
Alignment:
Q  313 gcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 378  Q
    |||||| ||||| ||| |||||||||||| ||| |||| ||||||||||||||||| |||||||||    
T  7643810 gcaatggttaagaaagaaaatatagtaattttgtattgaaacttgtgcattcaactcctcaaaagt 7643745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 19725413 - 19725303
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 116  Q
    ||||| || ||| |||||||||||| ||||  || ||||||||||||||||||  ||||||| ||||||||||||||       ||||||||| ||||||    
T  19725413 gtacatctatttcataaatcaataagttaatgataatttttatgtaataaagagatatttgttgacttttatatttt-agaaaatattatttcataagaa 19725315  T
Q  117 caaacatcattt 128  Q
     |||||||||||    
T  19725314 aaaacatcattt 19725303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 32719194 - 32719267
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||| ||||| ||| ||| |||||| || ||||||||  |||||||||| ||||||||||||||||||||    
T  32719194 gttgaattctgcttcgccaacatttttgaaaaataaaatattattattataattgtaaatgatagaaaatattt 32719267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 9178759 - 9178835
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| ||||||| |||| ||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  9178759 gtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgacttttatatttt 9178835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 13197862 - 13197786
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||| || ||| |||||||||||| ||||| |||||| ||||||||||||||  || |||||||||||||| ||||    
T  13197862 gtacatctatttcataaatcaataagttaacgatcattattatgtaataaagagataattgtcgacttttatgtttt 13197786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 16871604 - 16871680
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||||||||| ||| | |||||||||||||||||||||  | ||| || |||||||||||||    
T  16871604 gtacacctatttcataaatcaataacttatcgatcatttttatgtaataaagagatctttatcaacttttatatttt 16871680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 45145028 - 45145084
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaa 235  Q
    |||||||||  |||||||||||||||||||| ||||||||| |||||||||| ||||    
T  45145028 ttgaattttaatttgccgacacttttgagaaataaaatataattattataattgtaa 45145084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 3643039 - 3642931
Alignment:
Q  19 acacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaaca 118  Q
    |||||| ||| |||||||||||  ||||  || ||||||||||||||||||  ||||||| ||||||||||||||       ||||||||| |||||| |    
T  3643039 acacctatttcataaatcaatacgttaatgattatttttatgtaataaagagatatttgttgacttttatatttt-agaaaatattatttcataagaaaa 3642941  T
Q  119 aacatcattt 128  Q
    ||||||||||    
T  3642940 aacatcattt 3642931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 329 - 368
Target Start/End: Complemental strand, 34935198 - 34935159
Alignment:
Q  329 caaatatagtaatcttgcattggaacttgtgcattcaact 368  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  34935198 caaatataataatcttgcattggaacttgtgcattcaact 34935159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 36035856 - 36035801
Alignment:
Q  37 aataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattt 92  Q
    ||||| ||||| ||||||||||||||| ||||| ||||||||||| ||||||||||    
T  36035856 aataatttaacgatcatttttatgtaacaaagagctatttgtcgatttttatattt 36035801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 19718368 - 19718434
Alignment:
Q  27 tttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||| ||||| ||||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  19718368 tttaaaaatctataaattaactattatttttatgaaataaagagctatttgttgatatttatatttt 19718434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 36886222 - 36886320
Alignment:
Q  38 ataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaacaaacatcatttaattgttta 137  Q
    |||||||||||||||||||| || |||||||| |||||||| ||  ||||||||||       ||||||||  |||||| ||||||||||| ||||||||    
T  36886222 ataaattaactatcatttttttgaaataaagagctatttgttgatatttatattttaaaaaaatattattttataagaa-aaacatcatttcattgttta 36886320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 466
Target Start/End: Complemental strand, 40737263 - 40737217
Alignment:
Q  420 ggtttccttaaccattaccctaagggcatcggttaacataaccctta 466  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||||    
T  40737263 ggtttccttaaccattgccctaagggcaccggttagcataaccctta 40737217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 25699013 - 25698944
Alignment:
Q  182 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||| | | |||||||||| || |||||||||||||||||||  |||||| ||| |||||||||    
T  25699013 aattttgcttcgacaacacttttgataaataaaatatagttattataagtgtaaataatacaaaatattt 25698944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 32238295 - 32238227
Alignment:
Q  24 tgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||| |||||  |||||||||| |||||||||||| |||||| |  ||||||||||||||||||||||    
T  32238295 tgttttctaaatttataaattaacgatcatttttatgaaataaa-agttatttgtcgacttttatatttt 32238227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 43049887 - 43049826
Alignment:
Q  32 aaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||| ||||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  43049887 aaatctataaattaactattatttttatgaaataaagagctatttgttgatatttatatttt 43049826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 2165120 - 2165044
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| ||||||  |||| ||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  2165120 gtacacctatttcataaatttataagttaacgataatttttatgtgataaagagatatttatcgacttttatatttt 2165044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 7087993 - 7087917
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||||||||| |||   |||||||||||||||||||||  ||||| || | |||||||||||    
T  7087993 gtacacctatttcataaatcaataagttattgatcatttttatgtaataaagagatatttatcaaattttatatttt 7087917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 36496184 - 36496236
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaaga 69  Q
    |||||||| ||| |||| ||||||| ||||| |||||||||||||||||||||    
T  36496184 gtacacctatttcataattcaataagttaacaatcatttttatgtaataaaga 36496236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 42444288 - 42444340
Alignment:
Q  26 ttttataaatcaataaattaactatcatttttatgtaataaagaactatttgt 78  Q
    ||||| ||||| ||| ||||||||||||||||||| |||||||| ||||||||    
T  42444288 ttttaaaaatctatatattaactatcatttttatgaaataaagagctatttgt 42444340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 17642419 - 17642364
Alignment:
Q  38 ataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||||||||||||||||||| |||||| | |||||||| ||  ||||||||||    
T  17642419 ataaattaactatcatttttatgaaataaaaagctatttgttgatatttatatttt 17642364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 24247788 - 24247725
Alignment:
Q  30 ataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||| | ||||||||| |||||||||||  ||||| || |||||||||||||    
T  24247788 ataaatcaataagttatcgatcatttttctgtaataaagagatatttatcaacttttatatttt 24247725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 16323903 - 16323849
Alignment:
Q  39 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  16323903 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 16323849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 26439584 - 26439638
Alignment:
Q  39 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  26439584 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 26439638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Original strand, 35595093 - 35595123
Alignment:
Q  221 ttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||||||    
T  35595093 ttattataatagtaaatgatagaaaatattt 35595123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 39347193 - 39347247
Alignment:
Q  39 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  39347193 taaattaactattatttttatgaaataaagagctatttgttgatatttatatttt 39347247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 43921482 - 43921436
Alignment:
Q  32 aaatcaataaattaactatcatttttatgtaataaagaactatttgt 78  Q
    ||||| ||| ||||||||||||||||||| |||||||| ||||||||    
T  43921482 aaatctatacattaactatcatttttatgaaataaagagctatttgt 43921436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 11110500 - 11110468
Alignment:
Q  218 tagttattataatagtaaatgatagaaaatatt 250  Q
    ||||||||||||| |||||||||||||||||||    
T  11110500 tagttattataattgtaaatgatagaaaatatt 11110468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 313 - 369
Target Start/End: Complemental strand, 18421395 - 18421339
Alignment:
Q  313 gcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaactt 369  Q
    |||||| ||||| |||||||||||||||| | |||| | || |||||||||||||||    
T  18421395 gcaatggttaagaaagcaaatatagtaatatcgcatcgcaatttgtgcattcaactt 18421339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 29454203 - 29454259
Alignment:
Q  38 ataaattaactatcatttt-tatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||| |||||||| ||||||||||| ||||||||||| |  ||||||||||    
T  29454203 ataaattaacgatcattttttatgtaataaataactatttgtcaatatttatatttt 29454259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 1e-24; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 283 - 376
Target Start/End: Original strand, 55291236 - 55291330
Alignment:
Q  283 tttaagggaaatgttaaatagtgctc-cagagcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaa 376  Q
    |||||||||||||||||  ||||| | ||| ||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  55291236 tttaagggaaatgttaaccagtgccctcagggcaatgattaaggaagcaaatatagtaattttgcattgaaacttgtgcattaaacttctcaaaa 55291330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 27598317 - 27598264
Alignment:
Q  325 gaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 378  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27598317 gaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 27598264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 17616649 - 17616721
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  17616649 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 17616721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 45953816 - 45953744
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  45953816 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 45953744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 34792122 - 34792195
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||| ||||||||||||| | ||||||| ||||||||||  |||||||||||||||||||    
T  34792122 gttgaattttgctttgccaacacttttgagaaattaaatataattattataattataaatgatagaaaatattt 34792195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 24347001 - 24346929
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||||||||||| ||||||||||||| | ||||||| ||||||||||  |||||||||||||||||||    
T  24347001 ttgaattttgctttgccaacacttttgagaaattaaatataattattataattataaatgatagaaaatattt 24346929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 314 - 378
Target Start/End: Complemental strand, 24355882 - 24355818
Alignment:
Q  314 caatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 378  Q
    ||||| |||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||    
T  24355882 caatggttaaggaagcaaatatagtaatatcgcattggaacttgtgcattcaactcctcaaaagt 24355818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 27735160 - 27735232
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||||||||| |||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  27735160 ttgaattttgctttgtcgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 27735232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 36188057 - 36187985
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||| || |||||| || ||||||||||  |||||||||||||||||||    
T  36188057 ttgaattttgctttgccgacacttttgaaaaataaaatgtaattattataattataaatgatagaaaatattt 36187985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 48058843 - 48058767
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||||||||  |||| ||||||||||||||| ||| |||||||| ||||||||||||||||    
T  48058843 gtacacctgtttcataaatcaataagctaacgatcatttttatgtaaaaaaaaactatttatcgacttttatatttt 48058767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 55060295 - 55060367
Alignment:
Q  21 acctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||    
T  55060295 acctatttcataaatcaataaattaacaatcatttttatgtaatatagagctatctgtcgacttttatatttt 55060367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 34360841 - 34360932
Alignment:
Q  288 gggaaatgttaaatagtgctc-cagagcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 378  Q
    ||||||||||||  ||||| | ||| |||||| |||||||||||||||||||||||| | |||| ||||||||||||||||| |||||||||    
T  34360841 gggaaatgttaatcagtgccctcagggcaatggttaaggaagcaaatatagtaatctcgtattgaaacttgtgcattcaactcctcaaaagt 34360932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 34936791 - 34936864
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||| | | |||||||||| || |||||||| ||||||||||| ||||||||||||||||||||    
T  34936791 gttgaattttgcttcgacaacacttttgaaaaataaaatattgttattataattgtaaatgatagaaaatattt 34936864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 56272742 - 56272669
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||| ||||||| ||||||||| ||||||||  |||||||||  ||||||||||||||||||||    
T  56272742 gttgaattttgcttcgccgacatttttgagaaataaaatattattattataactgtaaatgatagaaaatattt 56272669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 1182754 - 1182682
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||| |||| ||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  1182754 ttgaattttacttttccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 1182682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 16917383 - 16917311
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||| |||||||||||||||||| || ||||||||  ||||||||||  |||||||||||||||||||    
T  16917383 ttgaatttttctttgccgacacttttgaaaaataaaatatgattattataattataaatgatagaaaatattt 16917311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 30951163 - 30951239
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||||||||||||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  30951163 gtacacctatttcataaatcaataaattatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 30951239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 378
Target Start/End: Complemental strand, 34650932 - 34650868
Alignment:
Q  314 caatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 378  Q
    ||||| |||| ||||||||||||||||| ||||||||||| |||||||||||||| |||||||||    
T  34650932 caatggttaaagaagcaaatatagtaattttgcattggaatttgtgcattcaactcctcaaaagt 34650868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 34936594 - 34936670
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||| ||||||| |||||||||||| ||||| ||||||||||||||| ||| | ||||| |||||||||||||||||    
T  34936594 gtactcctgtttcataaatcaataagttaacgatcatttttatgtaaaaaatagctattcgtcgacttttatatttt 34936670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 48058659 - 48058587
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||||||| ||| ||| ||||||||| |||||||| ||||||||||  ||||||||||||||||||||    
T  48058659 ttgaattttgcttcgccaacatttttgagaaataaaatattgttattataactgtaaatgatagaaaatattt 48058587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 56272945 - 56272869
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||||||||  |||| ||||||||||||||| |||||  ||||| ||||||||||||||||    
T  56272945 gtacacctgtttcataaatcaataagctaacgatcatttttatgtaaaaaagagttatttatcgacttttatatttt 56272869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 20927807 - 20927732
Alignment:
Q  18 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||| |||||||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  20927807 tacacctattttataaatcaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 20927732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 22413724 - 22413654
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| ||||| |||||||||||||| ||||||||| ||||||||||  ||| |||||||||||||    
T  22413724 ttgaattttgatttgcggacacttttgagaaataaaatataattattataattataattgatagaaaatat 22413654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 28013247 - 28013317
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  28013247 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 28013317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 30839486 - 30839556
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  30839486 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 30839556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 52104650 - 52104720
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  52104650 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 52104720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 52760030 - 52760100
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||||||  ||| | |||||||||||    
T  52760030 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattataactaatagaaaatat 52760100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 54851205 - 54851135
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| ||||||||||||||||| || ||||||||| |||||||||| |||| | |||||||||||    
T  54851205 ttgaattttgatttgccgacacttttgaaaaataaaatataattattataattgtaactaatagaaaatat 54851135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 22413927 - 22413817
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 116  Q
    |||||||| ||| |||||||||||| ||||  || ||||||||||||||||||  ||||||| ||||||||||||||       ||||||||| ||||||    
T  22413927 gtacacctatttcataaatcaataagttaatgattatttttatgtaataaagagatatttgttgacttttatatttt-aaaaaatattatttcataagaa 22413829  T
Q  117 caaacatcattt 128  Q
     |||||||||||    
T  22413828 aaaacatcattt 22413817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 17616446 - 17616522
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||||||||||  |||||||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  17616446 gtacacctattttataaatttataaattaacgataatttttatgtgataaagagatatttatcgacttttatatttt 17616522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 48253980 - 48254056
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  48253980 gtacacctatttcataaatcaataagttatcaatcatttttatgtaataaagagatatttatcaacttttatatttt 48254056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 48254185 - 48254257
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||| |||||||| ||||||||||| ||||||||| |||||||||| ||||   |||||||||||||    
T  48254185 ttgaattttgatttgccgatacttttgagaaataaaatataattattataattgtaaccaatagaaaatattt 48254257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 4540801 - 4540868
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaa 246  Q
    |||||||||| ||||||||||||||||| || ||||||||| |||||||||| |||| | ||||||||    
T  4540801 ttgaattttgatttgccgacacttttgaaaaataaaatataattattataattgtaactaatagaaaa 4540868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 20927606 - 20927555
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataat 230  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  20927606 ttgaattttgatttgccgacacttttgagaaataaaatataattattataat 20927555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 25420820 - 25420875
Alignment:
Q  21 acctgttttataaatcaataaattaactatcatttttatgtaataaagaactattt 76  Q
    |||||||| |||||||||||||||||| ||||||||||  ||||||||||||||||    
T  25420820 acctgtttcataaatcaataaattaacaatcatttttagataataaagaactattt 25420875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 251
Target Start/End: Original strand, 49144188 - 49144259
Alignment:
Q  180 tgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||| ||| | |||||||||||||| ||||||||| ||||||||||  ||| |||||||||||||||    
T  49144188 tgaattttgatttacggacacttttgagaaataaaatataattattataattataactgatagaaaatattt 49144259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 10332799 - 10332729
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| |||||| |||||||| |||| ||||||||| ||||||||||  ||| |||||||||||||    
T  10332799 ttgaattttgatttgccaacacttttaagaaataaaatataattattataatcataattgatagaaaatat 10332729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 23390663 - 23390593
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||| |||| ||||   |||||||||||    
T  23390663 ttgaattttgatttgccgacacttttgagaaataaaatataattattctaattgtaaccaatagaaaatat 23390593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 30951364 - 30951434
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| ||| |||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  30951364 ttgaattttgatttaccgacacttttgagaaataaaatataattattataattgtaacaaatagaaaatat 30951434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 248
Target Start/End: Complemental strand, 39512818 - 39512752
Alignment:
Q  182 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaata 248  Q
    ||||||| ||||||||||||||||| || ||||||||| |||||||||| |||| | ||||||||||    
T  39512818 aattttgatttgccgacacttttgaaaaataaaatataattattataattgtaactaatagaaaata 39512752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 46548526 - 46548456
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| ||||||||||||||| | || ||||||||| |||||||||| |||| | |||||||||||    
T  46548526 ttgaattttgatttgccgacacttttaaaaaataaaatataattattataattgtaactaatagaaaatat 46548456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 16917591 - 16917515
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| ||||||| |||| ||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  16917591 gtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgacttttatatttt 16917515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 25814420 - 25814496
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||| ||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  25814420 gtacacctatttcataaattaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 25814496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 25814622 - 25814678
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaa 235  Q
    |||||||||| ||||| |||||||||||||| ||||||||| |||||||||| ||||    
T  25814622 ttgaattttgatttgctgacacttttgagaaataaaatataattattataattgtaa 25814678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 27734949 - 27735025
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||| |||| ||||| || |||||||| | |||||||  ||||| ||||||||||||||||    
T  27734949 gtacacctgtttcataaatctataagttaacgataatttttatatgataaagagatatttatcgacttttatatttt 27735025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 30839282 - 30839358
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||| || ||| |||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  30839282 gtacatctatttcataaatcaataagttatcaatcatttttatgtaataaagagatatttatcaacttttatatttt 30839358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 40319367 - 40319291
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||||||||| ||| | ||||||||| |||||||||||  ||||| || |||||||||||||    
T  40319367 gtacacctatttcataaatcaataagttatcgatcatttttctgtaataaagagatatttatcaacttttatatttt 40319291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 46564752 - 46564828
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||||||||  ||||  || ||||||||||||||||||  ||||||| ||||||||||||||    
T  46564752 gtacacctatttcataaatcaatacgttaatgattatttttatgtaataaagagatatttgttgacttttatatttt 46564828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 50716580 - 50716504
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||| ||||||| ||||| |||||||||||||||||||||  | | | ||||||||||||||||    
T  50716580 gtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgacttttatatttt 50716504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 52104447 - 52104523
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||| || ||| |||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  52104447 gtacatctatttcataaatcaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 52104523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 54851388 - 54851312
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||| ||||||| ||||| |||||||||||||||||||||  | | | ||||||||||||||||    
T  54851388 gtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgacttttatatttt 54851312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 55060487 - 55060553
Alignment:
Q  182 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaata 248  Q
    |||||| ||| | ||||||||||||  |||||||| | ||||||||||| |||||||||||||||||    
T  55060487 aatttttcttcgacgacacttttgatgagtaaaattttgttattataattgtaaatgatagaaaata 55060553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 43518422 - 43518491
Alignment:
Q  24 tgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||| |||||||||||||||||||| || ||||   ||||||||||| ||||| || |||||||||||    
T  43518422 tgttttctaaatcaataaattaactataatatttacaaaataaagaactttttgttgatttttatatttt 43518491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 285 - 380
Target Start/End: Complemental strand, 46405624 - 46405525
Alignment:
Q  285 taagggaaatgttaaatagtgctc-cagagcaatgattaaggaagcaaatatag---taatcttgcattggaacttgtgcattcaacttctcaaaagtat 380  Q
    ||||||||||| |||  ||||| | ||| |||||| ||||||||||||||||||   |||||||||||   |||||||||||||| ||| ||||||||||    
T  46405624 taagggaaatgctaaccagtgccctcagggcaatggttaaggaagcaaatatagcagtaatcttgcatcaaaacttgtgcattcagcttttcaaaagtat 46405525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 4150369 - 4150409
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatata 219  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  4150369 ttgaattttgatttgccgacacttttgagaaataaaatata 4150409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 23390867 - 23390791
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||| || ||| |||||||||||| ||| | ||||||||| |||||||||||  ||||| || |||||||||||||    
T  23390867 gtacatctatttcataaatcaataagttatcgatcatttttctgtaataaagagatatttatcaacttttatatttt 23390791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 24347198 - 24347126
Alignment:
Q  21 acctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||||||| | |||||||| || ||||||||||||| ||||  ||||| |||||||| |||||||    
T  24347198 acctgtttcataaatctacaaattaacgataatttttatgtaatgaagagatatttatcgactttcatatttt 24347126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 34791919 - 34791995
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||  | || ||||| || ||||||||||||||||||  ||||| |||||||| |||||||    
T  34791919 gtacacctgtttcataaatttacaagttaacgataatttttatgtaataaagagatatttatcgactttcatatttt 34791995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 36188261 - 36188185
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| ||||||  |||| ||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  36188261 gtacacctatttcataaatttataagttaacgataatttttatgtgataaagagatatttatcgacttttatatttt 36188185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 39513023 - 39512947
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||| ||||||| ||||  ||| |||||||||||||||||  | ||| ||||||||||||||||    
T  39513023 gtacacctatttcataattcaataagttaataatcttttttatgtaataaagagatgtttatcgacttttatatttt 39512947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 40319161 - 40319105
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaa 235  Q
    |||||||||| |||| ||||||||||||||| ||||||||| ||||| |||| ||||    
T  40319161 ttgaattttgatttgtcgacacttttgagaaataaaatataattattctaattgtaa 40319105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 45954019 - 45953943
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||| | ||| ||||||| |||| ||||| || |||||||||| ||||| || ||||| ||||||||||||||||    
T  45954019 gtacacatatttcataaatctataagttaacgataatttttatgtgataaacaaatatttatcgacttttatatttt 45953943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 52759826 - 52759902
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||||||||| ||| | || |||||||| |||||||||  ||||| || |||||||||||||    
T  52759826 gtacacctatttcataaatcaataagttatcaattatttttatataataaagagatatttatcaacttttatatttt 52759902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 4540597 - 4540648
Alignment:
Q  18 tacacctgttttataaatcaataaattaactatcatttttatgtaataaaga 69  Q
    ||||||| ||| |||| ||||||| ||||| |||||||||||||||||||||    
T  4540597 tacacctatttcataattcaataagttaacaatcatttttatgtaataaaga 4540648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 30891206 - 30891257
Alignment:
Q  27 tttataaatcaataaattaactatcatttttatgtaataaagaactatttgt 78  Q
    |||| ||||| ||| ||||||||||||||||||| |||||||| ||||||||    
T  30891206 tttaaaaatctatatattaactatcatttttatgaaataaagagctatttgt 30891257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 49143999 - 49144062
Alignment:
Q  30 ataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||| ||||| ||||  || ||||||||||||||||||  ||||||| ||||||||||||||    
T  49143999 ataaattaataagttaatgattatttttatgtaataaagagatatttgttgacttttatatttt 49144062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 23556136 - 23556198
Alignment:
Q  31 taaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| |||||||| ||||||| |||| |||||| |  ||| ||||||||||||||||||    
T  23556136 taaatcaaaaaattaacgatcatttatatgaaataaatatttatctgtcgacttttatatttt 23556198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 28013070 - 28013140
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgactttta 87  Q
    |||||||| ||| |||||||||||| ||| | ||||||||| |||||||||||  ||||| || |||||||    
T  28013070 gtacacctatttcataaatcaataagttatcgatcatttttctgtaataaagagatatttatcaactttta 28013140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 19655218 - 19655271
Alignment:
Q  315 aatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaact 368  Q
    ||||| ||||||| |||||||| |||| ||| ||||||| ||||||||||||||    
T  19655218 aatgaataaggaaacaaatataataattttgtattggaatttgtgcattcaact 19655271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 53451772 - 53451813
Alignment:
Q  52 atttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||| |||||| ||||||||||||||||    
T  53451772 atttttatgtaacaaagagctatttttcgacttttatatttt 53451813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 10332990 - 10332926
Alignment:
Q  29 tataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||| |||||||| | ||| ||||||||||| |||||||||  ||||| | ||||||||||||||    
T  10332990 tatagatcaataagtcaacgatcatttttatataataaagagatatttattgacttttatatttt 10332926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 320 - 368
Target Start/End: Original strand, 20393926 - 20393974
Alignment:
Q  320 ttaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaact 368  Q
    ||||||||||||||||| |||| ||  ||||||||||||||| ||||||    
T  20393926 ttaaggaagcaaatataataatattatattggaacttgtgcagtcaact 20393974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 36091404 - 36091364
Alignment:
Q  38 ataaattaactatcatttttatgtaataaagaactatttgt 78  Q
    ||||||||||||||||||||||| |||||| | ||||||||    
T  36091404 ataaattaactatcatttttatgaaataaaaagctatttgt 36091364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 46548729 - 46548653
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| |||  ||| ||||||| ||||| ||||||||| |||||||||||  | | | ||||||||||||||||    
T  46548729 gtacacctatttcttaattcaataagttaacaatcatttttttgtaataaagagatgtctatcgacttttatatttt 46548653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 48018476 - 48018420
Alignment:
Q  37 aataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||||||  || ||||||||| |||||| |||||||||| || |||||||||||    
T  48018476 aataaattaatgattatttttatgaaataaaaaactatttgttgatttttatatttt 48018420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 2e-23; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 32621504 - 32621432
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  32621504 ttgaattttgcttcgccgacacttttgagaaataaaatatagttattataattataaatgatagaaaatattt 32621432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 19608657 - 19608582
Alignment:
Q  18 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||||| ||||| |||||||||||||||||||||||    
T  19608657 tacacctgtttcataaatcaataagttaacgatcatttttatgtaaaaaagagctatttgtcgacttttatatttt 19608582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 313 - 376
Target Start/End: Complemental strand, 26141799 - 26141736
Alignment:
Q  313 gcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaa 376  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26141799 gcaatggttaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaactcctcaaaa 26141736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 43388384 - 43388457
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||| ||| | ||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  43388384 gttgaattttgcttcgccaaaacttttgagaaataaaatatagttattataattgtaaatgatagaaaatattt 43388457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 8324551 - 8324479
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  8324551 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 8324479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 54910911 - 54910839
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  54910911 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 54910839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 52179195 - 52179268
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||| ||| ||| ||||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  52179195 gttgaattttgcttcgccaacatttttgagaaataaaatattgttattataattgtaaatgatagaaaatattt 52179268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 41902316 - 41902240
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| |||||| |||||  |||| ||||||||||||||| ||||| |||||||||||||||||||||||    
T  41902316 gtacacctgtttcataaattaataagctaacgatcatttttatgtaaaaaagagctatttgtcgacttttatatttt 41902240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 19608458 - 19608385
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||| ||| ||| |||||| || |||||||| ||||||||||| ||||||||||||||||||||    
T  19608458 gttgaattttgcttcgccaacatttttgaaaaataaaatattgttattataattgtaaatgatagaaaatattt 19608385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 41902113 - 41902040
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||| ||| ||| ||||||||| |||||||| ||||||||||  ||||||||||||||||||||    
T  41902113 gttgaattttgcttcgccaacatttttgagaaataaaatattgttattataactgtaaatgatagaaaatattt 41902040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 52178999 - 52179068
Alignment:
Q  24 tgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||| |||||||||||| ||||| ||||||||||||||| ||||| |||||| ||||||||||||||||    
T  52178999 tgtttcataaatcaataagttaacgatcatttttatgtaaaaaagagctatttatcgacttttatatttt 52179068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 43744264 - 43744340
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| |||||||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  43744264 gtacacctattttataaatcaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 43744340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 53444909 - 53444833
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||||||||| | ||| ||||| ||||| ||||||| ||||||| ||||| |||||||||||||||||||||||    
T  53444909 gtacacctgttttgtgaattaataatttaacgatcatttatatgtaacaaagagctatttgtcgacttttatatttt 53444833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 40284080 - 40284009
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    ||||||||||| |||||||||||||||||||| ||||||||| ||||||||||  |||  ||||||||||||    
T  40284080 gttgaattttgatttgccgacacttttgagaaataaaatataattattataattataatcgatagaaaatat 40284009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 40284265 - 40284202
Alignment:
Q  30 ataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||| ||||| ||||| || ||||||||||||||||||| ||||||||||||||||||||||    
T  40284265 ataaataaataagttaacgattatttttatgtaataaagaaatatttgtcgacttttatatttt 40284202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 32621706 - 32621587
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 116  Q
    |||||||| ||| ||||||||||||  |||  |||||||||||| || ||||| |||||||||||||||||||||||       ||||||||| ||||||    
T  32621706 gtacacctatttcataaatcaataagataaagatcatttttatgaaacaaagagctatttgtcgacttttatatttt-aaaaaatattatttcataagaa 32621608  T
Q  117 caaacatcatttaattgttta 137  Q
     |||||| |||| ||||||||    
T  32621607 aaaacataatttcattgttta 32621587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 47600190 - 47600260
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  47600190 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 47600260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 46948660 - 46948736
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||||||||| ||||  || ||||||||||||||||||  ||||||| ||||||||||||||    
T  46948660 gtacacctatttcataaatcaataagttaatgattatttttatgtaataaagagatatttgttgacttttatatttt 46948736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 52457987 - 52458063
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||| ||||||| ||||| |||||||||||||||||||||  | ||| ||||||||||||||||    
T  52457987 gtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtttatcgacttttatatttt 52458063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 54911115 - 54911039
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||||||||||  |||||||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  54911115 gtacacctattttataaatttataaattaacgataatttttatgtgataaagagatatttatcgacttttatatttt 54911039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 46948870 - 46948937
Alignment:
Q  182 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    ||||||| ||||| |||||||||||||| ||||||||| ||||||||||  ||| |||||||||||||    
T  46948870 aattttgatttgcagacacttttgagaaataaaatataattattataattataactgatagaaaatat 46948937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 542529 - 542459
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| |||||||||| ||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  542529 ttgaattttgatttgccgacatttttgagaaataaaatataattattataattgtaaccaatagaaaatat 542459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 320 - 378
Target Start/End: Complemental strand, 22938590 - 22938532
Alignment:
Q  320 ttaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 378  Q
    ||||| || ||||||||||||||| |||| ||||||||| |||||||||||||||||||    
T  22938590 ttaagaaaacaaatatagtaatctcgcatgggaacttgtacattcaacttctcaaaagt 22938532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 41574978 - 41575048
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| ||||| | |||||||||||| ||||||||| ||||||||||  ||| |||||||||||||    
T  41574978 ttgaattttgatttgcagccacttttgagaaataaaatataattattataattataactgatagaaaatat 41575048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 43744466 - 43744536
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||  |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  43744466 ttgaattttaatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 43744536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 45727143 - 45727081
Alignment:
Q  30 ataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattt 92  Q
    |||| ||||||| ||||| |||||||||||||||||||||| ||| | |||||||||||||||    
T  45727143 ataattcaataagttaacaatcatttttatgtaataaagaaatatctatcgacttttatattt 45727081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 54830985 - 54830915
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||| |||| ||||   |||||||||||    
T  54830985 ttgaattttgatttgccgacacttttgagaaataaaatataattattctaattgtaaccaatagaaaatat 54830915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 368
Target Start/End: Original strand, 49366246 - 49366311
Alignment:
Q  303 gtgctccagagcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaact 368  Q
    |||| |||| ||||||||||||| ||||||||||||||||  |||||| || ||||||||||||||    
T  49366246 gtgccccagggcaatgattaaggtagcaaatatagtaatcccgcattgaaatttgtgcattcaact 49366311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 45726951 - 45726899
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataat 230  Q
    ||||||||||| ||| |||||||||||||||| ||||||||| ||||||||||    
T  45726951 gttgaattttgatttaccgacacttttgagaaataaaatataattattataat 45726899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 54831190 - 54831114
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||||||||| ||| | ||||||||| |||||||||||  ||||| || |||||||||||||    
T  54831190 gtacacctatttcataaatcaataagttatcgatcatttttctgtaataaagagatatttatcaacttttatatttt 54831114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 542718 - 542655
Alignment:
Q  30 ataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  542718 ataaatcaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 542655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 25558512 - 25558445
Alignment:
Q  182 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    ||||||| ||||| |||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  25558512 aattttgatttgctgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 25558445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 47243837 - 47243778
Alignment:
Q  190 tttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||||||||||||| ||||||||| |||||||||| |||| | |||| ||||||    
T  47243837 tttgccgacacttttgagaaataaaatatatttattataattgtaactaataggaaatat 47243778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 378
Target Start/End: Original strand, 3383564 - 3383622
Alignment:
Q  320 ttaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 378  Q
    ||||| || |||||||| |||||| | |||||||||||||||||||||| |||||||||    
T  3383564 ttaagaaaacaaatataataatctcgtattggaacttgtgcattcaactcctcaaaagt 3383622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 137
Target Start/End: Original strand, 25592077 - 25592172
Alignment:
Q  41 aattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaacaaacatcatttaattgttta 137  Q
    |||||||||| ||||||||| ||||||||||||||||| ||  ||||||||||       | ||||||| |||||| ||||||||||| ||||||||    
T  25592077 aattaactattatttttatggaataaagaactatttgttgatatttatatttt-agaaaatgttatttcataagaaaaaacatcatttcattgttta 25592172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 137
Target Start/End: Original strand, 788534 - 788631
Alignment:
Q  39 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaacaaacatcatttaattgttta 137  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||       | ||||||| |||||| ||||||||||| ||||||||    
T  788534 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt-atgaaatgttatttcataagaaaaaacatcatttcattgttta 788631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 8324755 - 8324679
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| ||||||| |||| ||||| || |||||||||| |||||||  ||||| |||| |||||||||||    
T  8324755 gtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgaattttatatttt 8324679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 25558717 - 25558641
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||| ||||| ||| | |||||||||||||||||||||  ||||| || |||||| ||||||    
T  25558717 gtacacctatttcataaattaataagttatcgatcatttttatgtaataaagagatatttatcaacttttttatttt 25558641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 41574775 - 41574851
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||||  || |||||||||||| ||||  || ||||||||||||||||||  ||||| | ||||||||||||||    
T  41574775 gtacacctaattcataaatcaataagttaatgattatttttatgtaataaagagatatttattgacttttatatttt 41574851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 46868540 - 46868600
Alignment:
Q  31 taaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatt 91  Q
    ||||||||||||||||  || ||||||||| |||||||| ||||||||||| |||| ||||    
T  46868540 taaatcaataaattaatgattatttttatgaaataaagagctatttgtcgaattttgtatt 46868600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 27715959 - 27715897
Alignment:
Q  188 gctttgccgacacttttgagaagtaaaatat--agttattataatagtaaatgatagaaaata 248  Q
    |||||||||||| ||||||||| ||||||||  |||||||| ||| |||||| ||||||||||    
T  27715959 gctttgccgacatttttgagaaataaaatatagagttattacaattgtaaattatagaaaata 27715897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 47599988 - 47600063
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattt 92  Q
    ||||| || ||| |||||||||||| ||| | ||||||||||| |||||||||  ||||| || ||||||||||||    
T  47599988 gtacatctatttcataaatcaataagttatcgatcatttttatataataaagagatatttatcaacttttatattt 47600063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 3136607 - 3136553
Alignment:
Q  39 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  3136607 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 3136553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 47244052 - 47244002
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaa 67  Q
    |||||||| ||| |||||||||||| ||| | |||||||||||||||||||    
T  47244052 gtacacctatttcataaatcaataagttatcgatcatttttatgtaataaa 47244002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 53516643 - 53516697
Alignment:
Q  39 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  53516643 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 53516697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 52458199 - 52458252
Alignment:
Q  196 gacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    ||||||||||| || ||||||||| |||||||||| |||| | |||||||||||    
T  52458199 gacacttttgaaaaataaaatataattattataattgtaactaatagaaaatat 52458252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 2e-23; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 42647561 - 42647489
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  42647561 ttgaattttgcttcgccgacacttttgagaaataaaatatagttattataattttaaatgatagaaaatattt 42647489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 309 - 380
Target Start/End: Original strand, 3430557 - 3430627
Alignment:
Q  309 cagagcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagtat 380  Q
    |||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3430557 cagagcaatggttaaggaag-aaatatagcaatcttgcattggaacttgtgcattcaacttctcaaaagtat 3430627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 42647763 - 42647644
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 116  Q
    |||||||||||| |||||||||||| |||| |||||||||||||||| ||||| ||| |||||||||||||||||||       ||||||||| ||||||    
T  42647763 gtacacctgtttcataaatcaataagttaaatatcatttttatgtaacaaagagctacttgtcgacttttatatttt-agaaaatattatttcataagaa 42647665  T
Q  117 caaacatcatttaattgttta 137  Q
     |||||| |||| ||||||||    
T  42647664 aaaacataatttcattgttta 42647644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 31210783 - 31210711
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  31210783 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 31210711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 36672093 - 36672021
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  36672093 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 36672021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 5800079 - 5800007
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  ||||||||| |||||||||    
T  5800079 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgataaaaaatattt 5800007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 6079837 - 6079905
Alignment:
Q  182 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatatt 250  Q
    ||||||||||||||||||||||||| || ||||||||| ||||||||||  ||||||||||||||||||    
T  6079837 aattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatatt 6079905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 43025307 - 43025374
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaa 246  Q
    ||||||||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||| ||||    
T  43025307 ttgaattttgcttcgccgacaattttgagaaataaaatatagttattataattgtaaatgataaaaaa 43025374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 48354954 - 48355025
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    ||||||||||| |||||||| ||||||||||| ||||||||| |||||||||| |||| |||||||||||||    
T  48354954 gttgaattttgatttgccgatacttttgagaaataaaatataattattataatcgtaattgatagaaaatat 48355025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 29451055 - 29451130
Alignment:
Q  18 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||| ||||| |||||||||||||||||| || ||||||||  |||||||||||||||||||| |||||| ||||    
T  29451055 tacacttgtttgataaatcaataaattaacaattatttttataaaataaagaactatttgtcgatttttatctttt 29451130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 29852235 - 29852302
Alignment:
Q  24 tgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatt 91  Q
    |||||| ||||||||||||||||| |||||||||||| |||||| |  ||||||||||||||||||||    
T  29852235 tgttttctaaatcaataaattaacaatcatttttatgaaataaatagttatttgtcgacttttatatt 29852302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 12979747 - 12979677
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| ||||| |||||||||||||| ||||||||| ||||||||||  ||| |||||||||||||    
T  12979747 ttgaattttgatttgcggacacttttgagaaataaaatataattattataattataactgatagaaaatat 12979677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 26921917 - 26921987
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| ||||| |||||||||||||| ||||||||| ||||||||||  ||| |||||||||||||    
T  26921917 ttgaattttgatttgcggacacttttgagaaataaaatataattattataattataactgatagaaaatat 26921987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 33196509 - 33196578
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaata 248  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   ||||||||||    
T  33196509 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaata 33196578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 12979949 - 12979873
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||||||||| ||||  || ||||||||||||||||||  ||||||| ||||||||||||||    
T  12979949 gtacacctatttcataaatcaataagttaatgattatttttatgtaataaagagatatttgttgacttttatatttt 12979873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 22667304 - 22667380
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  22667304 gtacacctatttcataaatcaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 22667380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 28712139 - 28712195
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaa 235  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||    
T  28712139 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaa 28712195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 39628070 - 39628142
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||| |||||||||||||||||| || ||||||| | | ||||||||  |||||||||||||||||||    
T  39628070 ttgaattttactttgccgacacttttgaaaaataaaataaaataattataattataaatgatagaaaatattt 39628142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 22667505 - 22667556
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataat 230  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  22667505 ttgaattttgatttgccgacacttttgagaaataaaatataattattataat 22667556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 41085667 - 41085616
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataat 230  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  41085667 ttgaattttgatttgccgacacttttgagaaataaaatataattattataat 41085616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 41090435 - 41090384
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataat 230  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  41090435 ttgaattttgatttgccgacacttttgagaaataaaatataattattataat 41090384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 41903260 - 41903190
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| ||||||||||||||| |||| ||||||||| |||||||||| ||||   |||||||||||    
T  41903260 ttgaattttgatttgccgacacttttaagaaataaaatataattattataattgtaaccaatagaaaatat 41903190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 45427370 - 45427440
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| ||||| |||||||||||||| ||||||| | ||||||||||  ||| |||||||||||||    
T  45427370 ttgaattttgatttgcggacacttttgagaaataaaatagaattattataattataactgatagaaaatat 45427440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 11444310 - 11444386
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||||||||| ||||  || |||||||||||||||| |  ||||||| ||||||||||||||    
T  11444310 gtacacctatttcataaatcaataagttaatgattatttttatgtaataaatagatatttgttgacttttatatttt 11444386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 380
Target Start/End: Original strand, 42795382 - 42795442
Alignment:
Q  320 ttaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagtat 380  Q
    |||||||| |||||||||||||||| ||||| ||||||| |||||||||| | ||||||||    
T  42795382 ttaaggaaacaaatatagtaatcttacattgaaacttgtacattcaactttttaaaagtat 42795442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 33485968 - 33486043
Alignment:
Q  18 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||| ||| |||||||||||| ||| | || ||||||||||||||||||  ||||| || |||||||||||||    
T  33485968 tacacctatttcataaatcaataagttatcaattatttttatgtaataaagagatatttatcaacttttatatttt 33486043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 39627868 - 39627943
Alignment:
Q  18 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||| ||| ||||||| |||| ||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  39627868 tacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgacttttatatttt 39627943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 46153473 - 46153524
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataat 230  Q
    |||||||||| ||||||||||||||||| || ||||||||| ||||||||||    
T  46153473 ttgaattttgttttgccgacacttttgaaaaataaaatataattattataat 46153524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 11444512 - 11444582
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| ||||  ||||||||| |||| ||||||||| ||||||||||  ||| |||||||||||||    
T  11444512 ttgaattttgatttgtggacactttttagaaataaaatataattattataattataactgatagaaaatat 11444582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 33098766 - 33098820
Alignment:
Q  39 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||||| ||||||||||||||||| ||  ||||||||||    
T  33098766 taaattaactattatttttatggaataaagaactatttgttgatatttatatttt 33098820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 26921715 - 26921825
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 116  Q
    |||||||| ||| |||||||||||  ||||  || || |||||||||||||||  ||||||| ||||||||||||||       ||||||||| ||||||    
T  26921715 gtacacctatttcataaatcaatacgttaatgattatctttatgtaataaagagatatttgttgacttttatatttt-agaaaatattatttcataagaa 26921813  T
Q  117 caaacatcattt 128  Q
     |||||||||||    
T  26921814 aaaacatcattt 26921825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 46152419 - 46152464
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttat 224  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||    
T  46152419 ttgaattttgctttgccgacacttttgaaaaataaaatataattat 46152464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 33196304 - 33196356
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaaga 69  Q
    |||||||| ||| |||||||||||| ||| | |||||||||||||||||||||    
T  33196304 gtacacctatttcataaatcaataagttatcgatcatttttatgtaataaaga 33196356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 36672296 - 36672220
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||| || ||| ||||||| |||| ||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  36672296 gtacatctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgacttttatatttt 36672220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 2247402 - 2247351
Alignment:
Q  27 tttataaatcaataaattaactatcatttttatgtaataaagaactatttgt 78  Q
    |||| ||||| ||| ||||||||||||||||||| |||||||| ||||||||    
T  2247402 tttaaaaatctatatattaactatcatttttatgaaataaagagctatttgt 2247351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 28711938 - 28712013
Alignment:
Q  18 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||| ||||||||||||| || ||| | ||||||||| | |||||||||  ||||| || |||||||||||||    
T  28711938 tacacctattttataaatcaacaagttatcgatcatttttctataataaagatatatttatcaacttttatatttt 28712013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 41903449 - 41903386
Alignment:
Q  30 ataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||| ||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  41903449 ataaattaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 41903386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 47901049 - 47900979
Alignment:
Q  19 acacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatat 90  Q
    |||| ||||||| |||||||||||||||| |||| ||||||  |||||| || |||||||| ||||||||||    
T  47901049 acacttgttttaaaaatcaataaattaacgatcacttttataaaataaa-aattatttgtcaacttttatat 47900979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 2621019 - 2620965
Alignment:
Q  39 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||||| || ||||||||| ||||||||||||||||| ||  ||||||||||    
T  2621019 taaattaacaattatttttatggaataaagaactatttgttgatatttatatttt 2620965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 26011003 - 26011057
Alignment:
Q  39 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  26011003 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 26011057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 5800282 - 5800209
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatat 90  Q
    |||||||| ||| ||||||| |||| ||||| || ||||| |||| |||||||  ||||| |||||||||||||    
T  5800282 gtacacctatttcataaatctataagttaacgataattttaatgtgataaagagatatttatcgacttttatat 5800209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 29953718 - 29953787
Alignment:
Q  24 tgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||| |||||  |||||||||| ||| |||||||  ||||||||||| ||| ||||| ||||||||||    
T  29953718 tgttttttaaatttataaattaacgatcgtttttataaaataaagaactctttatcgacatttatatttt 29953787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 378
Target Start/End: Original strand, 41143793 - 41143854
Alignment:
Q  317 tgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 378  Q
    |||||||||||||||||||| || | ||| ||||||||||||| | |||| | |||||||||    
T  41143793 tgattaaggaagcaaatataatagtattgtattggaacttgtgtaatcaattcctcaaaagt 41143854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 45427201 - 45427275
Alignment:
Q  53 tttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaacaaacatcattt 128  Q
    |||||||||||||||||  ||||||| ||||||||||||||       ||||||||| |||||| |||||||||||    
T  45427201 tttttatgtaataaagagatatttgttgacttttatatttt-agaaaatattatttcataagaaaaaacatcattt 45427275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 33486171 - 33486211
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatata 219  Q
    |||||||||| |||||||| ||||||||||| |||||||||    
T  33486171 ttgaattttgatttgccgatacttttgagaaataaaatata 33486211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 35873996 - 35874052
Alignment:
Q  38 ataaattaactatcatttt-tatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||| |||||||| ||||||||||| ||||||||||| |  ||||||||||    
T  35873996 ataaattaacgatcattttttatgtaataaataactatttgtcaaaatttatatttt 35874052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 41541541 - 41541593
Alignment:
Q  41 aattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||| |||||||||||| |||||||| ||||||||| |  ||||||||||    
T  41541541 aattaacgatcatttttatgaaataaagagctatttgtcaatatttatatttt 41541593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 46152217 - 46152293
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||| || ||| ||||||  |||| ||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  46152217 gtacatctatttcataaatatataagttaacgataatttttatgtgataaagagatatttatcgacttttatatttt 46152293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 46153271 - 46153347
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| ||||||  |||| ||||| || |||||||||| |||||||  ||| | ||||||||||||||||    
T  46153271 gtacacctatttcataaatatataagttaacgataatttttatgtgataaagagatatatatcgacttttatatttt 46153347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 51402025 - 51402077
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataat 230  Q
    ||||||||||| |||| |||||||||| | || ||||||||| ||||||||||    
T  51402025 gttgaattttgatttgtcgacacttttaaaaaataaaatataattattataat 51402077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 7e-23; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 33902124 - 33902199
Alignment:
Q  18 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||||||||| |||||||| || ||||||||||| |||||||||||||||| ||||||||||||||||    
T  33902124 tacacctgttttataaattaataaattgaccatcatttttatataataaagaactatttatcgacttttatatttt 33902199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 14575715 - 14575787
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  14575715 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 14575787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 14721217 - 14721145
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  14721217 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 14721145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 182 - 251
Target Start/End: Original strand, 35777627 - 35777696
Alignment:
Q  182 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  35777627 aattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 35777696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 43167309 - 43167233
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| |||||||||||| ||||  ||||| ||||||||| ||||| |||||||||||||||||||||||    
T  43167309 gtacacctgtttcataaatcaataagttaaagatcatctttatgtaacaaagagctatttgtcgacttttatatttt 43167233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 7456588 - 7456659
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||| ||||||| ||||||||||||||||| ||||||| |||||||||||| |||||| |||||||||||    
T  7456588 gttgaaatttgcttcgccgacacttttgagaaataaaatacagttattataattgtaaataatagaaaatat 7456659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 38353729 - 38353676
Alignment:
Q  325 gaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 378  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  38353729 gaagcaaatatagtaatctcgcattggaacttgtgcattcaactcctcaaaagt 38353676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 231865 - 231789
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| |||||||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  231865 gtacacctattttataaatcaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 231789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 15264206 - 15264134
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||| ||||| |||||||||||||| ||||||||| |||||||||| ||||  ||||||||||||||    
T  15264206 ttgaattttgatttgcggacacttttgagaaataaaatataattattataattgtaaccgatagaaaatattt 15264134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 32092448 - 32092372
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| |||||||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  32092448 gtacacctattttataaatcaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 32092372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 41609250 - 41609178
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||||||||  |||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  41609250 ttgaattttgctttatcgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 41609178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 43167108 - 43167036
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||  ||||||||||||| || |||||||||||||||| ||| |||||||||| |||||||||    
T  43167108 ttgaattttgcttccccgacacttttgaaaaataaaatatagttattaaaattgtaaatgataaaaaatattt 43167036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 7456262 - 7456323
Alignment:
Q  32 aaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||| |||||||| |||||||||||||| |||||| |||||||| ||||||||||||||    
T  7456262 aaatcaacaaattaacgatcatttttatgtagtaaagagctatttgttgacttttatatttt 7456323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 14054574 - 14054505
Alignment:
Q  180 tgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  14054574 tgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 14054505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 36184102 - 36184028
Alignment:
Q  18 tacacctgttttataaatcaataaattaactatc-atttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||| |||||||||||||||||||||| ||| |||||||||||| |||||  ||| ||||||||||||||||||    
T  36184102 tacacctattttataaatcaataaattaacgatcaatttttatgtaacaaaga--tatctgtcgacttttatatttt 36184028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 972313 - 972241
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||| |||||||||||||||||| || ||||||| | |||| |||||  |||||||||||||||||||    
T  972313 ttgaattttactttgccgacacttttgaaaaataaaataaaattataataattataaatgatagaaaatattt 972241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 231663 - 231612
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataat 230  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  231663 ttgaattttgatttgccgacacttttgagaaataaaatataattattataat 231612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 312 - 369
Target Start/End: Complemental strand, 15311687 - 15311630
Alignment:
Q  312 agcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaactt 369  Q
    ||||||| |||||||| ||| ||||||||||| |||| ||||||||||||||||||||    
T  15311687 agcaatggttaaggaatcaagtatagtaatctcgcataggaacttgtgcattcaactt 15311630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 14054780 - 14054704
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||||||||| ||| | ||||||||| |||||||||||  ||||| || |||||||||||||    
T  14054780 gtacacctatttcataaatcaataagttatcgatcatttttctgtaataaagagatatttatcaacttttatatttt 14054704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 21946040 - 21946088
Alignment:
Q  28 ttataaatcaataaattaactatcatttttatgtaataaagaactattt 76  Q
    |||||||||||||||||||| |||||||||||| |||||||| ||||||    
T  21946040 ttataaatcaataaattaacaatcatttttatgaaataaagagctattt 21946088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 33654868 - 33654944
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||| |||| ||||||| | ||||||||| || ||||||||| ||||||||  ||||||| ||||||||||||||    
T  33654868 gtacacttgttatataaattattaaattaacgattatttttatgaaataaagagttatttgttgacttttatatttt 33654944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 972515 - 972440
Alignment:
Q  18 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||  |||||||||| |||| ||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  972515 tacacctaatttataaatctataagttaacgataatttttatgtgataaagagatatttatcgacttttatatttt 972440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 32092234 - 32092175
Alignment:
Q  190 tttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  32092234 tttgccgacacttttgagaaataaaatataattattataattgtaatcaatagaaaatat 32092175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 36183894 - 36183823
Alignment:
Q  178 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    ||||||||||| ||| |||||||||||||||| ||||||| |  |||| |||| |||| |||||||||||||    
T  36183894 gttgaattttgatttaccgacacttttgagaaataaaataaatctattgtaattgtaactgatagaaaatat 36183823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 7456462 - 7456512
Alignment:
Q  185 tttgctttgccgacacttttgagaagtaaaatatagttattataatagtaa 235  Q
    ||||||| ||||||||||||||||| ||||||| |||||||||||| ||||    
T  7456462 tttgcttcgccgacacttttgagaaataaaatacagttattataattgtaa 7456512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 664979 - 665024
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttat 224  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||    
T  664979 ttgaattttgctttgccgacacttttgaaaaataaaatataattat 665024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 35682446 - 35682385
Alignment:
Q  32 aaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||||| |||||||||||||| |||||||| |||| ||| ||  ||||||||||    
T  35682446 aaatcaataaattacctatcatttttatgaaataaagagctatatgttgatatttatatttt 35682385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 14575512 - 14575588
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| ||||||| |||| ||||| || |||||||||| ||||| |  ||||| ||||||||||||||||    
T  14575512 gtacacctatttcataaatctataagttaacgataatttttatgtgataaaaagatatttatcgacttttatatttt 14575588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 35777420 - 35777496
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| ||||||| |||| ||||| || |||||||||| |||||||  | ||| ||||||||||||||||    
T  35777420 gtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatctttatcgacttttatatttt 35777496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 41609452 - 41609376
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||| || ||| ||||||| |||| ||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  41609452 gtacatctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgacttttatatttt 41609376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 41802453 - 41802413
Alignment:
Q  38 ataaattaactatcatttttatgtaataaagaactatttgt 78  Q
    ||||||||||||||||||||||| |||||||| ||||||||    
T  41802453 ataaattaactatcatttttatgaaataaagagctatttgt 41802413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 9913249 - 9913304
Alignment:
Q  38 ataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||| |||||||||||||||||| |||| ||||||||||| |  ||||||||||    
T  9913249 ataaatgaactatcatttttatgtagtaaataactatttgtcaatatttatatttt 9913304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 13091259 - 13091204
Alignment:
Q  38 ataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||||||||||||||||||| |||||| | |||||||| ||  ||||||||||    
T  13091259 ataaattaactatcatttttatgaaataaaaagctatttgttgatatttatatttt 13091204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 29744248 - 29744193
Alignment:
Q  38 ataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||||||||||||||||||||| |||||||| |||||| | ||  ||||||||||    
T  29744248 ataaattaactatcatttttatgaaataaagagctatttattgatatttatatttt 29744193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 13795333 - 13795387
Alignment:
Q  39 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  13795333 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 13795387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 37431411 - 37431465
Alignment:
Q  39 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  37431411 taaattaactattatttttatgaaataaagagctatttgttgatatttatatttt 37431465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 9589554 - 9589514
Alignment:
Q  38 ataaattaactatcatttttatgtaataaagaactatttgt 78  Q
    ||||||||||||||||||||||| |||||| | ||||||||    
T  9589554 ataaattaactatcatttttatgaaataaaaagctatttgt 9589514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 11489628 - 11489704
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||| | ||| |||||| ||||| ||| | |||||||||||||||||||||  ||||| || |||||| ||||||    
T  11489628 gtacacatatttcataaattaataagttatcgatcatttttatgtaataaagagatatttatcaacttttttatttt 11489704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 11489830 - 11489878
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattat 227  Q
    |||||||||| |||||| |||||||||||||  |||||||| |||||||    
T  11489830 ttgaattttgatttgccaacacttttgagaaaaaaaatataattattat 11489878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 14721417 - 14721345
Alignment:
Q  21 acctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||| ||| ||||||| |||| ||||  || |||||||||| |||||||  ||||| ||||||||||||||||    
T  14721417 acctatttcataaatctataagttaaagataatttttatgtgataaagagatatttatcgacttttatatttt 14721345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 14967577 - 14967537
Alignment:
Q  38 ataaattaactatcatttttatgtaataaagaactatttgt 78  Q
    ||||||||||||||||||||||| |||||| | ||||||||    
T  14967577 ataaattaactatcatttttatgaaataaaaagctatttgt 14967537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 15264410 - 15264334
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||||||||| ||||  || ||||||||||||||||    || |||| ||||||||||||||    
T  15264410 gtacacctatttcataaatcaataagttaatgattatttttatgtaataaaaggatacttgttgacttttatatttt 15264334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 21051369 - 21051421
Alignment:
Q  26 ttttataaatcaataaattaactatcatttttatgtaataaagaactatttgt 78  Q
    ||||| |||||  |||||||||||| ||||||||| |||||||| ||||||||    
T  21051369 ttttaaaaatctttaaattaactattatttttatggaataaagagctatttgt 21051421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 34259886 - 34259830
Alignment:
Q  38 ataaattaactatcattttt-atgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||| ||||||||| |||||||||| ||||||||||| |  ||||||||||    
T  34259886 ataaattaacgatcattttttatgtaataaataactatttgtcaatatttatatttt 34259830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 3e-22; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 309 - 465
Target Start/End: Complemental strand, 8484785 - 8484631
Alignment:
Q  309 cagagcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagtatnnnnnnnctgagattttcaacctaaaac 408  Q
    |||| ||||| |||||||||||||||||||||| ||  ||||||| ||||||||||||||||||||||||||        ||| ||| ||||||||||||    
T  8484785 cagatcaatggttaaggaagcaaatatagtaatttttaattggaatttgtgcattcaacttctcaaaagtataaaaag--tgatattctcaacctaaaac 8484688  T
Q  409 tttannnnnnnggtttccttaaccattaccctaagggcatcggttaacataaccctt 465  Q
    |||        |||||||||||||||| ||||||| ||| |||||| ||||||||||    
T  8484687 tttctttttttggtttccttaaccattgccctaagagcaccggttagcataaccctt 8484631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 2197944 - 2197875
Alignment:
Q  182 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||    
T  2197944 aattttgcttcaccgacacttttgagaaataaaatatagttattatcattgtaaatgatagaaaatattt 2197875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 26611633 - 26611561
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||||||||||| ||||||||||||| | ||||||| ||||||||||  |||||||||||||||||||    
T  26611633 ttgaattttgctttgccaacacttttgagaaattaaatataattattataattataaatgatagaaaatattt 26611561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 2198149 - 2198030
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 116  Q
    ||||| || ||| |||||||||||| ||||  ||||||||||||||| ||||| |||||| ||||||||||||||||       ||||||||| ||||||    
T  2198149 gtacatctatttcataaatcaataagttaaagatcatttttatgtaacaaagagctatttatcgacttttatatttt-agaaaatattatttcataagaa 2198051  T
Q  117 caaacatcatttaattgttta 137  Q
     |||||| |||| ||||||||    
T  2198050 aaaacataatttcattgttta 2198030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 5078312 - 5078242
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  5078312 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaatcaatagaaaatat 5078242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 22734869 - 22734799
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  22734869 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 22734799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 32715769 - 32715699
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| ||||||||||||||||| || ||||||||| |||||||||| |||| | |||||||||||    
T  32715769 ttgaattttgatttgccgacacttttgaaaaataaaatataattattataattgtaactaatagaaaatat 32715699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 3448140 - 3448216
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||||||||| ||| | ||||||||| |||||||||||| ||||| || |||||||||||||    
T  3448140 gtacacctatttcataaatcaataagttatcgatcatttttctgtaataaagaaatatttatcaacttttatatttt 3448216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 10091651 - 10091583
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaat 247  Q
    |||||||||||||| ||||||| |||||||| ||||||||||||||||||||  ||||| ||| |||||    
T  10091651 ttgaattttgctttaccgacacatttgagaaataaaatatagttattataattttaaataatataaaat 10091583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 10091854 - 10091778
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||||||||||||||| || |||||||||||||||||   ||||| | ||||||||||||||    
T  10091854 gtacacctatttcataaatcaataaattaacgataatttttatgtaataaagtgatatttattgacttttatatttt 10091778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 465
Target Start/End: Original strand, 10324434 - 10324579
Alignment:
Q  320 ttaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagtatnnnnnnnctgagattttcaacctaaaactttannnnnnn 419  Q
    ||||||| |||||||||||| | |||||||||||||||| ||||||||| ||||||||| |        |   ||||||||| |||||||||            
T  10324434 ttaaggatgcaaatatagtagtattgcattggaacttgtacattcaactcctcaaaagtctaaaaaaaatagtattttcaacttaaaactttcttttttt 10324533  T
Q  420 ggtttccttaaccattaccctaagggcatcggttaacataaccctt 465  Q
    |||||||||||||||| ||||||||||| || ||||||| ||||||    
T  10324534 ggtttccttaaccattgccctaagggcaccgattaacatgaccctt 10324579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 17698063 - 17697997
Alignment:
Q  26 ttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||||||||||||| || |||||||| |||||||||  ||||| ||||||||||||||||    
T  17698063 ttttataaatcaataaattaacgat-atttttatataataaagagatatttatcgacttttatatttt 17697997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 24215368 - 24215306
Alignment:
Q  31 taaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||| | |||||||| |||||||||||| ||||||||||||||| ||| ||||||||||||    
T  24215368 taaatctaaaaattaacaatcatttttatgaaataaagaactatttatcgtcttttatatttt 24215306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 33610943 - 33611013
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 249  Q
    |||||||||| ||||| |||||||||||||| ||||||||| ||||||||||  ||| | |||||||||||    
T  33610943 ttgaattttgatttgcggacacttttgagaaataaaatataattattataattataattaatagaaaatat 33611013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 33610740 - 33610850
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 116  Q
    |||||||| |||||||||||||||  ||||  || ||||||||||||||||||  || |||| ||||||||||||||       ||||||||| ||||||    
T  33610740 gtacacctattttataaatcaatatgttaatgattatttttatgtaataaagagataattgttgacttttatatttt-agaaaatattatttcataagaa 33610838  T
Q  117 caaacatcattt 128  Q
     |||||||||||    
T  33610839 aaaacatcattt 33610850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 3448487 - 3448543
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaa 235  Q
    |||||||||| |||||||||||||||||||| ||||||||  |||||||||| ||||    
T  3448487 ttgaattttgatttgccgacacttttgagaaataaaatatgattattataattgtaa 3448543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 22735065 - 22734993
Alignment:
Q  21 acctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||| ||| |||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  22735065 acctatttcataaatcaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 22734993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 31394352 - 31394296
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaa 235  Q
    |||||||||| |||| ||||||||||||||| ||||||||| |||||||||| ||||    
T  31394352 ttgaattttgatttgtcgacacttttgagaaataaaatataattattataattgtaa 31394296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 32715970 - 32715894
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||| ||||||| ||||| |||||||||||||||||||||  | | | ||||||||||||||||    
T  32715970 gtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgacttttatatttt 32715894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 30020418 - 30020472
Alignment:
Q  39 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||||| ||||||||||||||||| ||  ||||||||||    
T  30020418 taaattaactattatttttatgaaataaagaactatttgttgatatttatatttt 30020472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 31394553 - 31394480
Alignment:
Q  20 cacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    ||||| ||| |||||||||||| ||| | |||||||| ||||||||||||  ||||| || |||||||||||||    
T  31394553 cacctatttcataaatcaataagttatcgatcattttaatgtaataaagagatatttatcaacttttatatttt 31394480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 5078514 - 5078438
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| |||||| ||||| ||| | ||||||||| |||||||||||  ||||| || |||||||||||||    
T  5078514 gtacacctatttcataaataaataagttatcgatcatttttctgtaataaagagatatttatcaacttttatatttt 5078438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 6265006 - 6265058
Alignment:
Q  41 aattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||| ||||||||| ||||||||||||||||| ||  ||||||||||    
T  6265006 aattaactattatttttatggaataaagaactatttgttgatatttatatttt 6265058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 20469090 - 20469134
Alignment:
Q  32 aaatcaataaattaactatcatttttatgtaataaagaactattt 76  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||||    
T  20469090 aaatctataaattaactatcatttttatgaaataaagagctattt 20469134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 26611835 - 26611759
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||||||| ||||||  | || ||||| || ||||||||||||||||||  ||||| |||||||| |||||||    
T  26611835 gtacacctgtttcataaatttacaagttaacgataatttttatgtaataaagagatatttatcgactttcatatttt 26611759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 27109052 - 27109106
Alignment:
Q  24 tgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgt 78  Q
    ||||||||||||  |||||||||| |||||||||||| ||||||||  |||||||    
T  27109052 tgttttataaatttataaattaacgatcatttttatgaaataaagagttatttgt 27109106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 27150849 - 27150903
Alignment:
Q  24 tgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgt 78  Q
    ||||||||||||  |||||||||| |||||||||||| ||||||||  |||||||    
T  27150849 tgttttataaatttataaattaacgatcatttttatgaaataaagagttatttgt 27150903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 70935 - 71007
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  70935 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 71007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 70733 - 70809
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| ||||||| |||| |||||||| |||||||||| |||||    ||||| ||||||||||||||||    
T  70733 gtacacctatttcataaatctataagttaactataatttttatgtgataaacggatatttatcgacttttatatttt 70809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 263068 - 263140
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  263068 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 263140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 262864 - 262940
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||| ||||||| ||||  |||  || |||||||||| |||||||  ||||| ||||||||||||||||    
T  262864 gtacacctatttcataaatctataaggtaaagataatttttatgtgataaagagatatttatcgacttttatatttt 262940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 5941 - 6013
Alignment:
Q  179 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 251  Q
    ||||||||||||| |||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  5941 ttgaattttgcttcgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 6013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 5737 - 5813
Alignment:
Q  17 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 93  Q
    |||||||| ||||||||||| |||| ||||  || |||||||||| |||||    ||||| ||||||||||||||||    
T  5737 gtacacctattttataaatctataagttaaagataatttttatgtgataaactgatatttatcgacttttatatttt 5813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 271019 - 271071
Alignment:
Q  27 tttataaatcaataaattaactatcatttttatgtaataaagaactatttgtc 79  Q
    |||||||||  |||||||||| |||||||||||| ||||||||  ||||||||    
T  271019 tttataaatttataaattaacgatcatttttatgaaataaagagttatttgtc 271071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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