View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4436-Insertion-14 (Length: 488)
Name: NF4436-Insertion-14
Description: NF4436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4436-Insertion-14 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 465; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 465; E-Value: 0
Query Start/End: Original strand, 8 - 488
Target Start/End: Complemental strand, 37941773 - 37941293
Alignment:
| Q |
8 |
attccctccttataatcttcttcgtcccgttgcacacaatcttcttcctccatcctcttccattcacaaccaattgctatcttcttcatttgatcatttt |
107 |
Q |
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| T |
37941773 |
attccctccttataatcttcttcgtcccgttgcacacaatcttcttcctccatcctcttccattcacaaccaatttctatcttcttcagttgatcatttt |
37941674 |
T |
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| Q |
108 |
aaacagcctctcaataatatatacaacatgcacagccaaaaccaagctttcacctttcgaacaattcatgatcaaacaccacaaaagccactgcaaaagt |
207 |
Q |
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| T |
37941673 |
aaacagcctctcaataatatatacaacatgcacagccaaaaccaagctttcacctttcgaacaattcatgatcaaacaccacaaaagccactgcaaaagt |
37941574 |
T |
|
| Q |
208 |
accctcttggttattcttctgctcttgtctcaaaaacacaagtaccatctttggaaattccgccaagtactgattctcatctcaaaatgggtaatgtctt |
307 |
Q |
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| T |
37941573 |
accctcttggttattcttcagctcttgtctcaaaaacacaagtaccatctttggaaattccgccaagtactgattctcatctcaaaatgggtaatgtctt |
37941474 |
T |
|
| Q |
308 |
ggaggaattaggaatattgaggcatgatgatcgtgttaacttgatgagtagtaacaatggttcaaaagaatgggcccgaagaactcatcatgacaccatt |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37941473 |
ggaggaattaggaatattgaggcatgatgatcgtgttaacttgatgagtagtaacaatggttcaaaagaatgggcccgaagaactcatcatgacaccatt |
37941374 |
T |
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| Q |
408 |
aacaacaatgattcatgtgatcatatggattaattaattgtttaatttcataagtgtattttgtaaagcaactgatgctag |
488 |
Q |
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| T |
37941373 |
aacaacaatgattcatgtgatcatatggattaattaattgtttaatttcataagtgtaatttgtaaagcaactgatgctag |
37941293 |
T |
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