View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4436_low_15 (Length: 204)
Name: NF4436_low_15
Description: NF4436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4436_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 30212414 - 30212577
Alignment:
| Q |
23 |
acaaccagtaatcaaccccgtaaccacaccctttccttccgactccgaggtaattttctattccttcaaccaatttacttcatcactgttatattttcat |
122 |
Q |
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| T |
30212414 |
acaaccagtaatcaaccccgtaaccacacccttcccttccgactccgaggtaattttctattccttcaaccaatttacttcatcactgttatattttcat |
30212513 |
T |
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| Q |
123 |
catcacaacatgtctaattattattcggtttttgtttgatctcagaaactcgctactaatattg |
186 |
Q |
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||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |
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| T |
30212514 |
catcacaacatgtctaattattattcggtttgtatttgatctcagaaactcgctactaatattg |
30212577 |
T |
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