View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4437-Insertion-6 (Length: 245)
Name: NF4437-Insertion-6
Description: NF4437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4437-Insertion-6 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 7 - 245
Target Start/End: Original strand, 34133979 - 34134231
Alignment:
| Q |
7 |
atatagtttataatatagatcacatgaatgtaaaatgtgaatttttattaat-------------aatattgactttataggaaggggtatatattttgt |
93 |
Q |
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| T |
34133979 |
atatagtttataatatagatcacatgaatgtaaaatgtgaatttttatttattttttttatttataatactgactttatagtaaggtgtatatattttgt |
34134078 |
T |
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| Q |
94 |
ccttggttattgaatgtaagcaaaattcataatgtatttggaccaaa-tttagtgtaaatacattttgatttttagttatatttaagattggaatgattt |
192 |
Q |
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| T |
34134079 |
ccttggttattgaatgtaagcaaaattcataatgtatttggaacaaattttagtgtaaatacattttgatttttagttatatttaagattggaatgattt |
34134178 |
T |
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| Q |
193 |
nnnnnnnnnnnnagtttactagttttccaaatatatcaatgaatttatttgga |
245 |
Q |
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| T |
34134179 |
tgtgtgtgtgtgaatttactagttttccaaatatatcaatgaatttatttgga |
34134231 |
T |
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