View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4437-Insertion-8 (Length: 55)
Name: NF4437-Insertion-8
Description: NF4437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4437-Insertion-8 |
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| [»] scaffold0173 (1 HSPs) |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: scaffold0173 (Bit Score: 48; Significance: 3e-19; HSPs: 1)
Name: scaffold0173
Description:
Target: scaffold0173; HSP #1
Raw Score: 48; E-Value: 3e-19
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 13262 - 13215
Alignment:
| Q |
8 |
tgcctaactcatcaaagctacaagagaggcaaacacacagattaggag |
55 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13262 |
tgcctaactcatcaaagctacaagagaggcaaacacacagattaggag |
13215 |
T |
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Target: chr6 (Bit Score: 48; Significance: 3e-19; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-19
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 34285541 - 34285494
Alignment:
| Q |
8 |
tgcctaactcatcaaagctacaagagaggcaaacacacagattaggag |
55 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34285541 |
tgcctaactcatcaaagctacaagagaggcaaacacacagattaggag |
34285494 |
T |
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