View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4438_high_6 (Length: 376)
Name: NF4438_high_6
Description: NF4438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4438_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 361; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 7 - 371
Target Start/End: Original strand, 17106402 - 17106766
Alignment:
| Q |
7 |
gtttgtgcatttgaaaccctagttttcctgctcacttgcttgctcctttttctgccatggctgctgaatttgttggcggtgcaattgttaattcaatcat |
106 |
Q |
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| T |
17106402 |
gtttgtgcatttgaaaccctagttttcctgctcacttgcttgctcctttttctgccatggctgctgaatttgttggcggtgcaattgttaattcaatcat |
17106501 |
T |
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| Q |
107 |
tcaggtcttggttgataagttagcttcaaccgaaatgatggattattttcgaactaaactcgatgggaatttgctgatgaaattaaacaatagtttgatt |
206 |
Q |
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| T |
17106502 |
tcaggtcttggttgataagttagcttcaaccgaaatgatggattattttcgaactaaactcgatgggaatttgctgatgaaattaaacaatagtttgatt |
17106601 |
T |
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| Q |
207 |
tccatcaatgctgttgttgaatatgctgagcagcagcagatcagaagatctactgtgaggacatggatttgtaatgtcaaagatgctataatggatgctg |
306 |
Q |
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| T |
17106602 |
tccatcaatgctgttgttgaatatgctgagcagcagcagatcagaagatctactgtgaggacatggatttgtaatgtcaaagatgctataatggatgctg |
17106701 |
T |
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| Q |
307 |
aggatgttcttgatgaaatctacatacagaatttgaagtccaagcttccttttacttcttctcac |
371 |
Q |
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| T |
17106702 |
aggatgttcttgatgaaatctacatacagaatttgaagtccaagcttccttttacttcttatcac |
17106766 |
T |
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