View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4438_low_17 (Length: 213)
Name: NF4438_low_17
Description: NF4438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4438_low_17 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 45566307 - 45566519
Alignment:
| Q |
1 |
tctctcctcctagaaattttgcctaccaagacctttaacccaagtaaacggataatcagcaagggaaatgtcatttaaattactgtcttgaaaccgtctc |
100 |
Q |
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| T |
45566307 |
tctctcctcctagaaattttgcctaccaagacctttaacccaagtaaacggataatcagcaagggaaatgtcatttaaattactgtcttgaaaccgtctc |
45566406 |
T |
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| Q |
101 |
tttaaatattatcaagggatttaaaaagacctcatattaaattctcaaacaagattagcttctccgctttcattctaagatctgcatccttcactactta |
200 |
Q |
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| T |
45566407 |
tttaaatattatcaagggatttaaaaagacctcatattaaattctcaaacaggattagcttctccgctttcattctaagatttgcatccttcactactta |
45566506 |
T |
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| Q |
201 |
acttctacacaac |
213 |
Q |
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| T |
45566507 |
acttctacacaac |
45566519 |
T |
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