View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4438_low_8 (Length: 372)
Name: NF4438_low_8
Description: NF4438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4438_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 18 - 363
Target Start/End: Original strand, 13408707 - 13409052
Alignment:
| Q |
18 |
tcaaccaattgaggtgttatgtgctagtttggatcgacggtaagtgtgataatattacggtgtgccaccgtggttttagtaaaagttacattttgaaata |
117 |
Q |
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| T |
13408707 |
tcaacaaattgatgtgttatgtgctagtttggatcgacggtaagtgtgataatattacggtgtgccaccgtggttttagtaaaagttacattttgaaata |
13408806 |
T |
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| Q |
118 |
caacaagatagtaaggtgtcattgtgattctgctaaactcgctgtcaatccaaatcttcaatatatttaccttatctgcattcgggaaaaggtcttgcag |
217 |
Q |
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| T |
13408807 |
caacaagatagtaaggtgtcattgtgattctgctaaactcgctgtcaatccaaatcttcaatatatttaccttatctgcattcgggaaaaggtcttgcag |
13408906 |
T |
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| Q |
218 |
nnnnnnnattcttgcactaattcttattcttctttcctgcaatgtacaaatcaagaaaataaatgaataagctcattaaattgcaacaaaatgtatccaa |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13408907 |
tttttttattcttgcactaattcttattcttctttcctgcaatgtacaaatcaaggaaataaatgaataagctcattaaattgcaacaaaatgtatccaa |
13409006 |
T |
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| Q |
318 |
gaaatttgtgattatagcaaggttgttagacttttaccctctctgc |
363 |
Q |
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| T |
13409007 |
gaaatttgtgattatagcaaggttgttagacttttaccctctctgc |
13409052 |
T |
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