View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4439-Insertion-1 (Length: 964)
Name: NF4439-Insertion-1
Description: NF4439
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4439-Insertion-1 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 597; Significance: 0; HSPs: 39)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 597; E-Value: 0
Query Start/End: Original strand, 7 - 961
Target Start/End: Complemental strand, 24840672 - 24839710
Alignment:
| Q |
7 |
acaaccattgaaagatagcatcatggagatgagggaagatttcatgatttaaccacctagttacagtaaacaaacctttagaactgtccattttcttaaa |
106 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||||| ||||||||||| |||| | || |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
24840672 |
acaaccattgaaagataccatcatggagataagggaaggtttcatgatttcaccagttggtgacagtaaacaaacctttagaactgcccattttcttaaa |
24840573 |
T |
|
| Q |
107 |
cctattgcaaattccatccatgaacttaacctcaatgagtttaaccttaactcatcatcatcttctttttcttcggtttctgaagcaaaggagtgtccct |
206 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||||||| | |||||||||||||||||||| | || | |||||||||||||||||||| || | |
|
|
| T |
24840572 |
cctattgcaagttccatccatgaacttaacttcaatgagatcaaccttaactcatcatcatcatgttct------gtttctgaagcaaaggagtggcctt |
24840479 |
T |
|
| Q |
207 |
ggaaaatcaatttcaatgggtggcactacccacaagagaaatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctgg |
306 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||| || |||||||||||| | |
|
|
| T |
24840478 |
tgaaaatccatttcaatgggtggcactacccacatgagaaatggattaagtgggttgatgaacttcagctcaaatatgaatcggtgtggaaaaaagcttg |
24840379 |
T |
|
| Q |
307 |
aatcttcgaacctataatgagtactaagagctgcataattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacaccttt |
406 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
24840378 |
catctttgaacctataatgagtactaagagctgcataattaaaaaccaagacttggtttgtggggttgttgagaaatggtgttgtgaaacaaacaccttc |
24840279 |
T |
|
| Q |
407 |
gtgtttctatttggtgaagcaacaatcactatggaagatgtcattgttttggagggtta---------------tcctgttttcacccaacttgaagatc |
491 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| |||||||||||||||| ||| || |||||||||| |||| |||||||||| |
|
|
| T |
24840278 |
gtgtttctatttggtgaagcaacaatcactttggaggatgtcattgttttggggggctactctctctttggtcttcctgttttcgcccaccttgaagatc |
24840179 |
T |
|
| Q |
492 |
aggagatgagagaggtcgaacagaagctcgtcaacattgaaacaaaggagaggattatcaaaagtattttcaccttccacaacagtgtggatggatattt |
591 |
Q |
| |
|
| |||||||||||||| |||||||||||| |||||||||||| | ||||||||| ||| |||| ||||||| ||| |||||||||||||||||| |
|
|
| T |
24840178 |
aagagatgagagaggtggaacagaagctcatcaacattgaaagccaagagaggatttcgaaaggtatgg-caccttctacatcagtgtggatggatattt |
24840080 |
T |
|
| Q |
592 |
tcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttggtgaaaagttcttt |
691 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| ||||||| |
|
|
| T |
24840079 |
tcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctagtgaaatgttcttt |
24839980 |
T |
|
| Q |
692 |
gtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacaca |
791 |
Q |
| |
|
||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
24839979 |
gtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataacgatttaaggttgtttaagaacaca |
24839880 |
T |
|
| Q |
792 |
attgttgatttcaaaaaatgtcctgataaatttccttttatgttggaagttaatgtacaatcacccttttacctggttcaagtttgggtttgggaaaggt |
891 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24839879 |
attgttgatttcaaaaaatttcctgataaatttccctttatgctggacgttaatgtacaatcacccttttacctggttcaagtttgggtttgggaaaggt |
24839780 |
T |
|
| Q |
892 |
tcaaaaatttgcagccacaacccaagttgatcgataatcgagaccatgtattgttgaggtgtcagaatgt |
961 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| |
|
|
| T |
24839779 |
tcaaaaatttgcagccacaacccaagttgggcaataatcgagaccatgtattgttgaggtggcataatgt |
24839710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 538; E-Value: 0
Query Start/End: Original strand, 7 - 961
Target Start/End: Original strand, 19943147 - 19944099
Alignment:
| Q |
7 |
acaaccattgaaagatagcatcatggagatgagggaagatttcatgatttaaccacctagttacagtaaacaaacctttagaactgtccatttt-cttaa |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| | || |||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
19943147 |
acaaccattgaaagatagcatcatggagatgagggaagatttcatgatttcaccagatggtcacagtaaacaaacctttagaactgcccatttttcttaa |
19943246 |
T |
|
| Q |
106 |
acctattgcaaattccatccatgaacttaacctcaatgagtttaaccttaactcatcatcatcttctttttcttcggtttctgaagcaaaggagtgtccc |
205 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||| |||||||||||||| ||| ||| || ||||||||||||||||||| |
|
|
| T |
19943247 |
acctattgcaaattccattcatgaacttaacctcaatcagtttaaccttaacc-----tcaa----------ttccattcatgaagcaaaggagtgtccc |
19943331 |
T |
|
| Q |
206 |
tggaaaatcaatttcaatgggtggcactacccacaagagaaatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctg |
305 |
Q |
| |
|
| |||||||| |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19943332 |
ttcaaaatcaacttcaatgggtggcactcccctcaagagaaatgggttaagtgggttgacgaacttaagcccaaatatgaatcagtatggaaaaaagcta |
19943431 |
T |
|
| Q |
306 |
gaatcttcgaacctataatgagtactaagagctgcataattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctt |
405 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19943432 |
gaatctttgaacctataatgagtattaagagctgcataattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctt |
19943531 |
T |
|
| Q |
406 |
tgtgtttctatttggtgaagcaacaatcactatggaagatgtcattgttttggagggtta---------------tcctgtttt-cacccaacttgaaga |
489 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| || ||||||||| ||||||||||||||| |
|
|
| T |
19943532 |
tgtgtttctatttggtgaagcaacaatcactttggaagatgtcattgttttggggggatactctctctttggtcatcctgtttttcacccaacttgaaga |
19943631 |
T |
|
| Q |
490 |
tcaggagatgagagaggtcgaacagaagctcgtcaacattgaaacaaaggagaggattatcaaaagtattttcaccttccacaacagtgtggatggatat |
589 |
Q |
| |
|
||||||||| ||| |||| |||||||||||| ||| |||||||| | |||| |||| ||||||| | | ||||||||| |||||||||||||||| |
|
|
| T |
19943632 |
tcaggagattagaaaggtggaacagaagctcatcagcattgaaagccaagagatgatt-tcaaaaggtatggccccttccacatcagtgtggatggatat |
19943730 |
T |
|
| Q |
590 |
tttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttggtgaaaagttct |
689 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||| ||||||| |||| | |||||||||||||| |
|
|
| T |
19943731 |
tttcatcgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcaattt--gtttttcctcatagatacaatgtggtgaaaagttct |
19943828 |
T |
|
| Q |
690 |
ttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaaca |
789 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
19943829 |
--gtttcctattgctgttcatcttgctagagggattcctatggctttggcacctgctgttttggctagcttatataaggatttgagtttgtttaagaaac |
19943926 |
T |
|
| Q |
790 |
caattgttgatttcaaaaaatgtcctgataaattt-ccttttatgttggaagttaatgtacaatcacccttttacctggttcaagtttgggtttgggaaa |
888 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19943927 |
aaattgttgatttgaaaaaatgtcctgataaattttccctttatgttggacgttaatgtacaatcacccttttacctggttcaagtttgggtttgggaaa |
19944026 |
T |
|
| Q |
889 |
ggttcaaaaatttgcagccacaacccaagttgatcgataatcgagaccatgtattgttgaggtgtcagaatgt |
961 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||| || ||||| |
|
|
| T |
19944027 |
ggttcaaaaatttgcagccacaaccaaagttgatcaataatggagaccatgtattgttgaggtggcataatgt |
19944099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 246 - 923
Target Start/End: Original strand, 19857723 - 19858416
Alignment:
| Q |
246 |
aatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcataat |
345 |
Q |
| |
|
||||||||||||||||||| ||||| | || ||||||||||| || ||||| ||||||| ||| || || |||| | ||||||||| || ||||||| |
|
|
| T |
19857723 |
aatgggttaagtgggttgaccaacttcaaccaaaatatgaatctgtgtggaagaaagctgaaatttttgatgctattaggagtactaaatgccgcataat |
19857822 |
T |
|
| Q |
346 |
taaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaaca-aacacctttgtgtttctatttggtgaagcaacaatcactatggaaga |
444 |
Q |
| |
|
||| ||| | ||||||||| |||| ||||||| |||||||||| ||| || || || || ||||||| ||||||||||||||||| ||||| || || |
|
|
| T |
19857823 |
gaaagatccaaacttggtttatggggttgttgacaaatggtgttctgagacccaatacattcgtgtttccctttggtgaagcaacaattactatagagga |
19857922 |
T |
|
| Q |
445 |
tgtcattgttttggagggtta---------------tcctgttttcacccaacttgaagatcaggagatgagagaggtcgaacagaagctcgtcaacatt |
529 |
Q |
| |
|
||| | ||||||| |||||| ||||||||||| | ||| ||||||||||| ||| ||| || |||||||||||| |||||||| |
|
|
| T |
19857923 |
tgttgtggttttggggggttactctctctttggtgatcctgttttcaaaccactcgaagatcaggaaatgcaagatgtggaacagaagctcatcaacatt |
19858022 |
T |
|
| Q |
530 |
gaaacaaaggagaggattatcaaaagtattttcaccttccacaacagtgtggatggatattttcatcgataaaggtagtgaaattgagcatgaagcattt |
629 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19858023 |
gaaacaaaggagaggattatcaaaagtattttcaccttccacaacagtgtggatggatattttcatcgataaaggtagtgaaattgagcatgaagcattt |
19858122 |
T |
|
| Q |
630 |
cttgctacttggttctcaatttttgttttccctcataaatactctttggtgaaaagttctttgtttcctattgtcattcatctagctagagggattccta |
729 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||| ||| ||||| | |||||||| |||||||||||||||| ||| ||| |||||||| | | ||| |
|
|
| T |
19858123 |
cttgctacttggttgtcaatttttgtttttcctaatagatactttaatgtgaaaagatctttgtttcctattgctattggtcttgctagaggaaatacta |
19858222 |
T |
|
| Q |
730 |
tttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacacaattgttgatttcaaaaaatgtcctgataaatttccttt |
829 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||| || |||||||||| | |||||||||| || |
|
|
| T |
19858223 |
tcgctttggcacctgctgttttggctagcttatataacgatttgagtttgtttaagaaacaaattgttgaattgaaaaaatgtcgttataaatttccatt |
19858322 |
T |
|
| Q |
830 |
tatgttggaagttaatgtacaatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgatc |
923 |
Q |
| |
|
||||||| ||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
19858323 |
ggtgttggacgttaatgtataatcacccttttacttgcttcaagtttgggtttgggaaaggttcaaaaatttagagccacaacccatgttgatc |
19858416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 248 - 952
Target Start/End: Original strand, 19853167 - 19853867
Alignment:
| Q |
248 |
tgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcataatta |
347 |
Q |
| |
|
|||||||||||||||||| ||||| | | ||||||||||||| ||||||| |||| ||||||||| || |||| |||||||||||||||||||||| | |
|
|
| T |
19853167 |
tgggttaagtgggttgatcaacttcaactcaaatatgaatcactatggaagaaagttggaatctttgatgctattatgagtactaagagctgcataaaga |
19853266 |
T |
|
| Q |
348 |
aaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaagatgt |
447 |
Q |
| |
|
|| ||||| ||||| | |||||| ||||||| |||||||||| ||| || || || |||||||| | |||||||||||||||||| ||| |||| ||||| |
|
|
| T |
19853267 |
aagatcaaaacttgttatgtggggttgttgacaaatggtgttctgagaccaatacatttgtgttcccatttggtgaagcaacaataactttggaggatgt |
19853366 |
T |
|
| Q |
448 |
cattgttttggagggtta---------------tcctgttttcacccaacttgaagatcaggagatgagagaggtcgaacagaagctcgtcaacattgaa |
532 |
Q |
| |
|
|| ||||||| |||||| |||| |||||| ||||||||||||| |||| |||| | || ||||||||| ||||||||||| |
|
|
| T |
19853367 |
tatggttttggggggttaccctatcattggtgatcctattttcaaatcacttgaagatcagagaatgaaagagttggagcagaagctcatcaacattgaa |
19853466 |
T |
|
| Q |
533 |
acaaaggagaggattatcaaaagtattttcaccttccacaacagtgtggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttctt |
632 |
Q |
| |
|
|||||||||| ||||||||| ||| ||||||||||| | ||||||||| | ||||| | | |||||||||||||||||| ||||||||||||||| |
|
|
| T |
19853467 |
gaaaaggagagggttatcaaaactatgc-caccttccacatctgtgtggatgacttttttctttggtaaaggtagtgaaattgaacatgaagcatttctt |
19853565 |
T |
|
| Q |
633 |
gctacttggttctcaatttttgttttccctcataaatactctttggtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctattt |
732 |
Q |
| |
|
||||||||||| || ||||||||||| ||||||| ||||| | | |||||||| |||||||||||||||| |||| ||| |||||||| | | ||||| |
|
|
| T |
19853566 |
gctacttggttgtctatttttgtttttcctcatagatactttattgtgaaaagatctttgtttcctattgctattcgtcttgctagaggtaatactattg |
19853665 |
T |
|
| Q |
733 |
ctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacacaattgttgatttcaaaaaatgtcctgataaatttccttttat |
832 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||||||| |||| ||| |
|
|
| T |
19853666 |
ctttggcacctgctgttttggctagcttatataacgatttgagtttgtttaagaaaaaaattgttgatttcaaaaaatttcct----------ctt---- |
19853751 |
T |
|
| Q |
833 |
gttggaagttaatgtacaatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgatcgataatcga |
932 |
Q |
| |
|
|| |||||| | ||||||||||||||| |||| |||| |||||| ||||| || |||| |||||||||||||||||| ||||||||| | ||| || |
|
|
| T |
19853752 |
----gatgttaatctgcaatcacccttttacttggtacaagcttgggtgtgggagagattcataaatttgcagccacaaccgaagttgatcaacaatgga |
19853847 |
T |
|
| Q |
933 |
gaccatgtattgttgaggtg |
952 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
19853848 |
gaccatgtattgttgaggtg |
19853867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 345 - 533
Target Start/End: Complemental strand, 20005351 - 20005163
Alignment:
| Q |
345 |
ttaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaaga |
444 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
20005351 |
ttaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactttggaaga |
20005252 |
T |
|
| Q |
445 |
tgtcattgttttggagggttatcctgttttcacccaacttgaagatcaggagatgagagaggtcgaacagaagctcgtcaacattgaaa |
533 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20005251 |
tgtcattgttttggggggttatcctgttttcacccaacttgaagatcaggagatgagagaggtcgaacagaagctcgtcaacattgaaa |
20005163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 579 - 920
Target Start/End: Original strand, 19956084 - 19956428
Alignment:
| Q |
579 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
678 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||| | |
|
|
| T |
19956084 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcttttcttgctacttggttgtcaatttttgttttccctcataaatattcttccg |
19956183 |
T |
|
| Q |
679 |
tgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
778 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||| |||||||| | ||||||| |||||||||| |||||||| |||||| ||||||||||||||| || |
|
|
| T |
19956184 |
tgaaaagttatttgtttcctattgttgttcatcttgctagaggaaatcctattgctttggcaccagctgttttagctagcatatataaggatttaacttt |
19956283 |
T |
|
| Q |
779 |
gtttaagaacacaattgttgatttcaaaaaatgtcc---------tgataaatttccttttatgttggaagttaatgtacaatcacccttttacctggtt |
869 |
Q |
| |
|
||| ||||| | || |||||||| ||||| ||| ||||| || |||| | ||| ||| | | ||||||||||||||| ||||| |
|
|
| T |
19956284 |
gttaaagaaaaaaacagttgatttgtcaaaatatcctgtgggtggtgatagatatcct------tcagaacttactcttcaatcacccttttacttggtt |
19956377 |
T |
|
| Q |
870 |
caagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttg |
920 |
Q |
| |
|
||| ||||||| |||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
19956378 |
caaatttgggtgtgggaaaggttcaaaaatttacagccacaacccatgttg |
19956428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 577 - 802
Target Start/End: Complemental strand, 20016321 - 20016096
Alignment:
| Q |
577 |
tgtggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactcttt |
676 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
20016321 |
tgtggatggatatgttcgctgataaaggtagtgaaattgaacatgaagcatttcttgctacttggctgtcaatttttgttttccctcataaatactcttc |
20016222 |
T |
|
| Q |
677 |
ggtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaagg |
776 |
Q |
| |
|
|||||||||| ||||||||| |||| |||||||| |||||| | | ||||||| |||||||||| ||||| ||||||||| ||||||| |||||||| |
|
|
| T |
20016221 |
cgtgaaaagttgtttgtttccgattgctattcatcttgctagacgaaatcctattgctttggcaccagctgtcttggctagcatatataaagatttaagt |
20016122 |
T |
|
| Q |
777 |
ttgtttaagaacacaattgttgattt |
802 |
Q |
| |
|
||||||||||| |||||||||||||| |
|
|
| T |
20016121 |
ttgtttaagaaaacaattgttgattt |
20016096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 579 - 802
Target Start/End: Complemental strand, 20036721 - 20036498
Alignment:
| Q |
579 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
678 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| ||||||||| ||| ||||| |
|
|
| T |
20036721 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
20036622 |
T |
|
| Q |
679 |
tgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
778 |
Q |
| |
|
|||||||||||||||||||||||| | |||| |||||||| | || |||| |||| |||||||||||||| ||||| ||||||||||||||| || |
|
|
| T |
20036621 |
tgaaaagttctttgtttcctattgctgtatatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaacttt |
20036522 |
T |
|
| Q |
779 |
gtttaagaacacaattgttgattt |
802 |
Q |
| |
|
||||||||| |||||||||||||| |
|
|
| T |
20036521 |
gtttaagaaaacaattgttgattt |
20036498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 164 - 458
Target Start/End: Original strand, 26651604 - 26651898
Alignment:
| Q |
164 |
tcatcttctttttcttcggtttctgaagcaaaggagtgtccctggaaaatcaatttcaatgggtggcactacccacaagagaaatgggttaagtgggttg |
263 |
Q |
| |
|
|||||||||| || ||| |||| | || ||||||| || || | ||||||| |||||| |||||| |||||||| |||||||||||||||||||| |
|
|
| T |
26651604 |
tcatcttcttcttgttctgtttttaaaccaaaggaatggcctttgaaaatccgtttcaactggtggcgttacccacacacgaaatgggttaagtgggttg |
26651703 |
T |
|
| Q |
264 |
atgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcataattaaaaatcaagacttggt |
363 |
Q |
| |
|
|| ||||||||||||| ||||||||||| ||||||||||| || ||||| |||||||||||||||||||||||| || |||| ||||||||||||||||| |
|
|
| T |
26651704 |
atcaacttaagcccaagtatgaatcagtgtggaaaaaagccggcatctttgaacctataatgagtactaagagccgcgtaatgaaaaatcaagacttggt |
26651803 |
T |
|
| Q |
364 |
ttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaagatgtcattgttttgg |
458 |
Q |
| |
|
|| ||||||| ||||||||||||| |||| ||||| |||||| |||| |||||||| |||||||||||| |||| |||||||||||||||| |
|
|
| T |
26651804 |
ttatgggatttctgagaaatggtgtagtgagacaaattgctttgtttttccttttggtgaggcaacaatcactttggaggatgtcattgttttgg |
26651898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 579 - 923
Target Start/End: Original strand, 26647004 - 26647348
Alignment:
| Q |
579 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
678 |
Q |
| |
|
||||| |||| |||||| |||||||||||||||||||| ||||||||||| ||| |||||||||| ||| ||| |||||| |||||| | | ||||| |
|
|
| T |
26647004 |
tggatcgatagtttcatggataaaggtagtgaaattgaacatgaagcattcctttctacttggttgtcagtttatgtttttcctcatctaaa---tttgg |
26647100 |
T |
|
| Q |
679 |
tgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
778 |
Q |
| |
|
||||||||| |||||||||||||| ||||||| |||||||||| ||| ||| |||||||||| |||||||| ||||||||||||||||||||||| || |
|
|
| T |
26647101 |
tgaaaagttgtttgtttcctattgctgttcatcttgctagagggaatccaattgctttggcaccggctgttttagctagcttatataaggatttaagttt |
26647200 |
T |
|
| Q |
779 |
gtttaagaacacaattgttgatttcaaaaaa---------tgtcctgataaatttccttttatgttggaagttaatgtacaatcacccttttacctggtt |
869 |
Q |
| |
|
||||||||| ||| |||||||||| |||||| || ||||| || |||| |||||||||| | | ||||||||||||||| ||||| |
|
|
| T |
26647201 |
gtttaagaaaacacttgttgatttgaaaaaaatttctgatggtggtgatagatatcct------ttggaagttactcttcaatcacccttttacttggtt |
26647294 |
T |
|
| Q |
870 |
caagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgatc |
923 |
Q |
| |
|
||| ||||||| |||||||||||||||||||| || ||||||||||| |||||| |
|
|
| T |
26647295 |
caaatttgggtgtgggaaaggttcaaaaatttacaaccacaacccaatttgatc |
26647348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 579 - 793
Target Start/End: Original strand, 19848990 - 19849204
Alignment:
| Q |
579 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
678 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| ||||||||| ||| ||||| |
|
|
| T |
19848990 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
19849089 |
T |
|
| Q |
679 |
tgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
778 |
Q |
| |
|
|||||||||||||||||||||||| | |||| |||||||| | || |||| |||| |||||||||||||| ||||| ||||||||||||||| || |
|
|
| T |
19849090 |
tgaaaagttctttgtttcctattgctgtatatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaacttt |
19849189 |
T |
|
| Q |
779 |
gtttaagaacacaat |
793 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
19849190 |
gtttaagaaaacaat |
19849204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 586 - 912
Target Start/End: Original strand, 19812287 - 19812613
Alignment:
| Q |
586 |
atattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttggtgaaaag |
685 |
Q |
| |
|
|||||||| | | |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
19812287 |
atattttcgttggtaaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcaatttttgtttttcctcataaata---tttggtgaaaaa |
19812383 |
T |
|
| Q |
686 |
ttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaag |
785 |
Q |
| |
|
||||||||||| || | |||| ||| ||||||||| ||||||| |||||||||| ||||| ||||||||| ||||||| |||||||| ||||||||| |
|
|
| T |
19812384 |
gtctttgtttccgatcgctattcttcttgctagagggtatcctattgctttggcaccagctgtcttggctagcatatataaagatttaagtttgtttaag |
19812483 |
T |
|
| Q |
786 |
aacacaattgttgatttcaaaaaatgtcc---------tgataaatttccttttatgttggaagttaatgtacaatcacccttttacctggttcaagttt |
876 |
Q |
| |
|
|| |||||||||||||| ||||| ||| ||||| |||||| ||||| ||| | | ||||||||||||||| |||||||| ||| |
|
|
| T |
19812484 |
aaaacaattgttgatttgtcaaaatatcctgttggtggtgatagatttcc------cttggagattactcttcaatcacccttttacttggttcaaattt |
19812577 |
T |
|
| Q |
877 |
gggtttgggaaaggttcaaaaatttgcagccacaac |
912 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
19812578 |
gggtttgggagaggttcaaaaatttgcaaccacaac |
19812613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 582 - 952
Target Start/End: Original strand, 26653155 - 26653525
Alignment:
| Q |
582 |
atggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttggtga |
681 |
Q |
| |
|
|||||||||||||| || |||||||||||||||| ||||| ||||| ||||| ||||||| |||||||||||||| ||||||| | | | | |||| |
|
|
| T |
26653155 |
atggatattttcattgactaaggtagtgaaattgaacatgatgcattccttgcagcttggttgtcaatttttgtttttcctcatatagaat---tagtga |
26653251 |
T |
|
| Q |
682 |
aaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtt |
781 |
Q |
| |
|
|||||||||||||| |||||| ||||||| |||||||| | ||||||| |||||||||| |||||||| ||||| |||||||||| || | ||||| |
|
|
| T |
26653252 |
aaagttctttgttttctattgctgttcatcttgctagaggaaatcctattgctttggcaccagctgttttagctagtatatataaggacttgactttgtt |
26653351 |
T |
|
| Q |
782 |
taagaacacaattgttgattt--caaaaaat-------gtcctgataaatttccttttatgttggaagttaatgtacaatcacccttttacctggttcaa |
872 |
Q |
| |
|
|||||| |||||||||| ||| ||||| || || ||||| ||||||||| |||||||||| ||| ||||||||||||| |||||||| |
|
|
| T |
26653352 |
taagaaaacaattgttggtttgtcaaaatattatgttggtggtgatagatttccttt------ggaagttaatctacgatcacccttttacttggttcaa |
26653445 |
T |
|
| Q |
873 |
gtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgatcgataatcgagaccatgtattgttgaggtg |
952 |
Q |
| |
|
||||||| ||||| ||||||| ||||||||| |||||||||||||||||| ||| | ||||||| |||||||||||| |
|
|
| T |
26653446 |
atttgggtgtgggagaggttcacaaatttgcaaccacaacccaagttgatcaatagtgaagaccattcattgttgaggtg |
26653525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 579 - 800
Target Start/End: Original strand, 20046123 - 20046341
Alignment:
| Q |
579 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
678 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| || ||||| || ||| |||||||||| |||||||||||||| ||||||||| | | ||| |
|
|
| T |
20046123 |
tggatggatatgttcatcgataaaggtagtgaaattgaacacgaagccttccttactacttggttgtcaatttttgtttttcctcataaaaa---tatgg |
20046219 |
T |
|
| Q |
679 |
tgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
778 |
Q |
| |
|
|||||| || ||||||| |||||| ||| |||| |||||||| | ||| ||| ||||||||||||||||||||| |||| |||||||||||||||| || |
|
|
| T |
20046220 |
tgaaaaattgtttgttttctattgctattaatcttgctagaggaaatccaattgctttggcacctgctgttttgggtagcatatataaggatttaagttt |
20046319 |
T |
|
| Q |
779 |
gtttaagaacacaattgttgat |
800 |
Q |
| |
|
||||||||||||||| ||||| |
|
|
| T |
20046320 |
atttaagaacacaattattgat |
20046341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 192 - 469
Target Start/End: Original strand, 19818156 - 19818433
Alignment:
| Q |
192 |
caaaggagtgtccctggaaaatcaatttcaatgggtggcactacccacaagagaaatgggttaagtgggttgatgaacttaagcccaaatatgaatcagt |
291 |
Q |
| |
|
|||| |||||||| | |||||| |||||||||| |||| | | | ||||||||||||| ||| ||||||||||||||||| || || |||||||| || |
|
|
| T |
19818156 |
caaatgagtgtcctttgaaaatacatttcaatggatggcgccaacaacaagagaaatggtttagttgggttgatgaacttaaaccaaagtatgaatctgt |
19818255 |
T |
|
| Q |
292 |
atggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcataattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgt |
391 |
Q |
| |
|
||||| |||||| ||||||| || |||| ||||||||||| ||| ||| |||||||||| ||||| | | |||| |||||||||||||||||||| |
|
|
| T |
19818256 |
gtggaagaaagctagaatctttgatgctattatgagtactaaatgctacattcataaaaatcaaaacttgctatttggggttgttgagaaatggtgttgt |
19818355 |
T |
|
| Q |
392 |
gaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaagatgtcattgttttggagggttatcct |
469 |
Q |
| |
|
|| || ||||||||||| |||| ||||||||| ||||| |||||| |||| |||||||| ||||||| |||||||||| |
|
|
| T |
19818356 |
gagactaacacctttgtttttccatttggtgaggcaactatcactttggaggatgtcatagttttggggggttatcct |
19818433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 579 - 787
Target Start/End: Original strand, 19838393 - 19838601
Alignment:
| Q |
579 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
678 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||| |||||||||||||| ||| || || |||||| | |
|
|
| T |
19838393 |
tggatggatattttcatcgataaaggtagcgaaattgaacatgaagcttttctagctacttggttgtcaatttttgtttttcctaatcaacactcttgcg |
19838492 |
T |
|
| Q |
679 |
tgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
778 |
Q |
| |
|
||||||| | ||||||||| ||||| ||||||| |||||||| | | ||||| |||||||||| |||||||| |||||| ||||||| ||||||| || |
|
|
| T |
19838493 |
tgaaaagctttttgtttccaattgttgttcatcttgctagaggaaattctattgctttggcaccagctgttttagctagcatatataatgatttaacttt |
19838592 |
T |
|
| Q |
779 |
gtttaagaa |
787 |
Q |
| |
|
||| ||||| |
|
|
| T |
19838593 |
gttaaagaa |
19838601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 146 - 471
Target Start/End: Original strand, 19955628 - 19955953
Alignment:
| Q |
146 |
tttaaccttaactcatcatcatcttctttttcttcggtttctgaagcaaaggagtgtccctggaaaatcaatttcaatgggtggcactacccacaagaga |
245 |
Q |
| |
|
||||| |||||| ||| ||||| |||| |||||| |||| |||| |||||||| ||| | ||||||||| |||| ||| |||| | | ||||| ||| |
|
|
| T |
19955628 |
tttaagcttaacccattttcatcatcttcttcttctgtttttgaaccaaaggagcttcctttgaaaatcaacttcactggctggcgcctcacacaaaaga |
19955727 |
T |
|
| Q |
246 |
aatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcataat |
345 |
Q |
| |
|
|||||||| |||||| || ||||||| | || |||||||| || |||| |||| ||||||||| || |||||||||||||||| ||| ||| |
|
|
| T |
19955728 |
aatgggtttcttgggttcataaacttaaacaaaagtatgaatctgtttggaggaaagttggaatctttgatgctataatgagtactaaatgctacattca |
19955827 |
T |
|
| Q |
346 |
taaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaagat |
445 |
Q |
| |
|
||||||| || ||||| | | ||| |||||||||||||||||||||| ||||| || |||||||||| ||||||||| |||||||||||| |||||||| |
|
|
| T |
19955828 |
taaaaataaaaacttgctatttggagttgttgagaaatggtgttgtgagacaaatacatttgtgtttccatttggtgaggcaacaatcactttggaagat |
19955927 |
T |
|
| Q |
446 |
gtcattgttttggagggttatcctgt |
471 |
Q |
| |
|
||||| ||||||| |||||| ||||| |
|
|
| T |
19955928 |
gtcatggttttggggggttaccctgt |
19955953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 579 - 802
Target Start/End: Original strand, 19818557 - 19818777
Alignment:
| Q |
579 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
678 |
Q |
| |
|
|||||||| ||||| || | |||||||| |||||||| |||||||| ||||||||||||||||| |||||||||||||| |||||||| | ||||| |
|
|
| T |
19818557 |
tggatggaaatttttattggtaaaggtaccgaaattgaacatgaagcttttcttgctacttggttatcaatttttgtttttcctcataagaa---tttgg |
19818653 |
T |
|
| Q |
679 |
tgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
778 |
Q |
| |
|
|||||| || | |||||||| ||| || |||| |||||||||| ||||||| |||||||||| ||||||||||||| | | ||||| |||||||| || |
|
|
| T |
19818654 |
tgaaaaattatctgtttcctgttgctgttaatcttgctagagggaatcctattgctttggcaccggctgttttggctaacatttataaagatttaagttt |
19818753 |
T |
|
| Q |
779 |
gtttaagaacacaattgttgattt |
802 |
Q |
| |
|
||||||||| | ||| |||||||| |
|
|
| T |
19818754 |
gtttaagaaaaaaatagttgattt |
19818777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 645 - 826
Target Start/End: Original strand, 19971677 - 19971858
Alignment:
| Q |
645 |
tcaatttttgttttccctcataaatactctttggtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctg |
744 |
Q |
| |
|
|||||||||||||| |||||| ||||| | | ||||||||||||||||||||||||| |||||| | | |||||| | | ||||| |||||||||| |
|
|
| T |
19971677 |
tcaatttttgttttttctcatagatactttatagtgaaaagttctttgtttcctattgctattcatttggttagaggcaatactattgctttggcaccaa |
19971776 |
T |
|
| Q |
745 |
ctgttttggctagcttatataaggatttaaggttgtttaagaacacaattgttgatttcaaaaaatgtcctgataaatttcc |
826 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||||| |||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
19971777 |
ctgttttggctagcttatataaggattgaactctgtttaagaaacaaattgttgatttgaaaaaatatcctgataaatttcc |
19971858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 579 - 802
Target Start/End: Original strand, 19951124 - 19951344
Alignment:
| Q |
579 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
678 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |||||||| || |||| ||||||||| ||| |||||||||| ||| |||| | |||| |
|
|
| T |
19951124 |
tggatggatattttcactgataaaggtagtgaaattgaacatgaagccttccttgttacttggttgtcactttttgtttttcctaataataa---attgg |
19951220 |
T |
|
| Q |
679 |
tgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
778 |
Q |
| |
|
||| |||| || | | ||||||| |||||||| |||||||| | ||||||| ||||||| || |||||||| |||||| ||||||||||||||| || |
|
|
| T |
19951221 |
tgaggagttattcgctacctattgctattcatcttgctagaggaaatcctattgctttggctccagctgttttagctagcatatataaggatttaacttt |
19951320 |
T |
|
| Q |
779 |
gtttaagaacacaattgttgattt |
802 |
Q |
| |
|
|||||| || ||||||||||||| |
|
|
| T |
19951321 |
gtttaaaaaagcaattgttgattt |
19951344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 197 - 465
Target Start/End: Original strand, 19811884 - 19812152
Alignment:
| Q |
197 |
gagtgtccctggaaaatcaatttcaatgggtggcactacccacaagagaaatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatgga |
296 |
Q |
| |
|
|||||||| | ||||||| |||||| ||| |||| ||||||||||||| ||||||| ||||||||||| ||||| || || |||||||| | |||| |
|
|
| T |
19811884 |
gagtgtcctttgaaaatccatttcagtggatggcgtcacccacaagagaagtgggttagatgggttgatgagcttaaaccaaagtatgaatctttgtgga |
19811983 |
T |
|
| Q |
297 |
aaaaagctggaatcttcgaacctataatgagtactaagagctgcataattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaac |
396 |
Q |
| |
|
| |||||| ||||||| || |||| |||||||| ||| | |||| | ||||||| | | ||| | | |||| |||||||||||||||||||||| || |
|
|
| T |
19811984 |
agaaagctagaatctttgatgctattatgagtaccaagtgtcacatactcaaaaatctaaaattgctctttggggttgttgagaaatggtgttgtgagac |
19812083 |
T |
|
| Q |
397 |
aaacacctttgtgtttctatttggtgaagcaacaatcactatggaagatgtcattgttttggagggtta |
465 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| |||||| |||| ||| | || ||||||| |||||| |
|
|
| T |
19812084 |
taacacctttgtttttccatttggtgaagcaactatcactttggaggatattatggttttggggggtta |
19812152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 245 - 465
Target Start/End: Original strand, 19989174 - 19989394
Alignment:
| Q |
245 |
aaatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcataa |
344 |
Q |
| |
|
||||||||| | ||||||||| ||||||| ||||||| ||||| || ||||| |||| ||| ||||| ||| |||| |||||||| ||| | ||||||| |
|
|
| T |
19989174 |
aaatgggtttattgggttgatcaacttaaacccaaatttgaatatgtgtggaagaaagttggcatctttgaagctattatgagtaccaagtgttgcataa |
19989273 |
T |
|
| Q |
345 |
ttaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaaga |
444 |
Q |
| |
|
||| |||| ||||| | | |||| |||||||||||||||||||||| |||||||| ||||| |||| ||||||||| ||||| |||||| ||||||| |
|
|
| T |
19989274 |
agaaagatcataacttgctatttggggttgttgagaaatggtgttgtgagacaaacacatttgtttttccatttggtgaggcaactatcactttggaaga |
19989373 |
T |
|
| Q |
445 |
tgtcattgttttggagggtta |
465 |
Q |
| |
|
||| || ||||| | |||||| |
|
|
| T |
19989374 |
tgttatggttttagggggtta |
19989394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 579 - 773
Target Start/End: Original strand, 19989522 - 19989716
Alignment:
| Q |
579 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactc-tttg |
677 |
Q |
| |
|
||||||||| ||||||| |||||||||| |||| |||| |||||||||||||||||||||||||| |||||||||||| ||| ||||| | || | | |
|
|
| T |
19989522 |
tggatggatgttttcattgataaaggtaatgaacttgaacatgaagcatttcttgctacttggttgtcaatttttgttcatccttataaa-agtcgtgtt |
19989620 |
T |
|
| Q |
678 |
gtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggattta |
773 |
Q |
| |
|
||||| |||||||| |||| | ||| |||||||| |||||||| | ||||||| | || |||||||| ||||||||||| || |||||||||||| |
|
|
| T |
19989621 |
gtgaatagttctttctttcgtgttgctattcatcttgctagaggaaatcctattgcattagcacctgcagttttggctagtttgtataaggattta |
19989716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 176 - 469
Target Start/End: Original strand, 26646593 - 26646886
Alignment:
| Q |
176 |
tcttcggtttctgaagcaaaggagtgtccctggaaaatcaatttcaatgggtggcactacccacaagagaaatgggttaagtgggttgatgaacttaagc |
275 |
Q |
| |
|
||||| |||| |||| |||||||||| || | ||||||||| |||| ||| |||| ||||| | |||||||||| ||||||||| ||||||| | |
|
|
| T |
26646593 |
tcttctgtttttgaaccaaaggagtggcctttgaaaatcaacttcactggttggcgtcgcccacgcgccaaatgggttagatgggttgatcaacttaaac |
26646692 |
T |
|
| Q |
276 |
ccaaatatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcataattaaaaatcaagacttggtttgtgggattgt |
375 |
Q |
| |
|
|||||||||| |||| ||||| |||| ||| ||||| ||| | |||||| | || | | || ||||| ||||||||| |||||| | | |||| | || |
|
|
| T |
26646693 |
tcaaatatgaaacagtgtggaagaaagttggcatctttgaagcaataatgggcacaaggtgccgcatacataaaaatcatgacttgctatatggggtagt |
26646792 |
T |
|
| Q |
376 |
tgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaagatgtcattgttttggagggttatcct |
469 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||| || |||||||||||||| || ||| |||| ||| |||| ||||||| |||||||||| |
|
|
| T |
26646793 |
tgagaaatggtgttgtgagacaaatacctttgtgattgcctttggtgaagcaactattactttggaggatatcatggttttggggggttatcct |
26646886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 587 - 702
Target Start/End: Original strand, 30914651 - 30914763
Alignment:
| Q |
587 |
tattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttggtgaaaagt |
686 |
Q |
| |
|
||||||||| ||||||| |||||||||||| ||||||||||| ||| |||||||||| |||||||||||||||||||| ||| | ||||||||||||| |
|
|
| T |
30914651 |
tattttcattgataaagttagtgaaattgaacatgaagcattccttactacttggttgtcaatttttgttttccctcacaaaga---tttggtgaaaagt |
30914747 |
T |
|
| Q |
687 |
tctttgtttcctattg |
702 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
30914748 |
tttttgtttcctattg |
30914763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 216 - 471
Target Start/End: Original strand, 19838007 - 19838262
Alignment:
| Q |
216 |
atttcaatgggtggcactacccacaagagaaatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcga |
315 |
Q |
| |
|
||||| |||| |||||||| | ||| | ||||||||| ||||||||| | ||||| || || |||||||| || |||| |||| ||||||||| || |
|
|
| T |
19838007 |
atttctatggctggcactatcaccaacacaaatgggtttgttgggttgataagcttaaaccaaagtatgaatctgtttggaggaaagttggaatctttga |
19838106 |
T |
|
| Q |
316 |
acctataatgagtactaagagctgcataattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttcta |
415 |
Q |
| |
|
|||||||||||||||| ||| ||| ||||||| || ||||| | | || |||||||||||||||| ||||| || || || |||||||||| | |
|
|
| T |
19838107 |
tgctataatgagtactaaatgctacattcataaaaataaaaacttgttatttgaagttgttgagaaatggtgctgtgagaccaatacatttgtgtttcca |
19838206 |
T |
|
| Q |
416 |
tttggtgaagcaacaatcactatggaagatgtcattgttttggagggttatcctgt |
471 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||| ||||||| |||||| ||||| |
|
|
| T |
19838207 |
tttggtgaggcaacaatcactttggaagatgtcatggttttggggggttaccctgt |
19838262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 281 - 472
Target Start/End: Original strand, 19950812 - 19951003
Alignment:
| Q |
281 |
tatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcataattaaaaatcaagacttggtttgtgggattgttgaga |
380 |
Q |
| |
|
|||||||| || ||||| |||||||||||||| || |||| ||||||||||| ||| ||| ||||||||| ||||| ||| |||| ||||||||| |
|
|
| T |
19950812 |
tatgaatctgtgtggaagaaagctggaatctttgatgctattatgagtactaaaagcataatacataaaaatcataacttgctttttggggttgttgaga |
19950911 |
T |
|
| Q |
381 |
aatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaagatgtcattgttttggagggttatcctgtt |
472 |
Q |
| |
|
|||||||| ||| || || || |||||||||| ||||||||| ||||| |||||| |||| ||||| || ||||||| |||||| |||||| |
|
|
| T |
19950912 |
aatggtgtactgagaccaatacatttgtgtttccatttggtgaggcaactatcactttggaggatgttatggttttggggggttaccctgtt |
19951003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 777 - 875
Target Start/End: Original strand, 26652015 - 26652116
Alignment:
| Q |
777 |
ttgtttaagaacacaattgttgatttcaaaaaatgtcctgataaatttccttttatgttggaagttaatg---tacaatcacccttttacctggttcaag |
873 |
Q |
| |
|
||||||||||| ||| |||||||||| ||||||||||||||||||||| | || ||||||| ||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
26652015 |
ttgtttaagaaaacacttgttgatttgaaaaaatgtcctgataaattttccttgttgttggaggttaatgtactacaatcacccttttacttggttcaag |
26652114 |
T |
|
| Q |
874 |
tt |
875 |
Q |
| |
|
|| |
|
|
| T |
26652115 |
tt |
26652116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 849 - 915
Target Start/End: Original strand, 19989795 - 19989861
Alignment:
| Q |
849 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaaccca |
915 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||||||||| || |||||||||| |
|
|
| T |
19989795 |
caatcacccttttacttggttcaagtttgggtttgggagaggttcaaaaatttacaaccacaaccca |
19989861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 244 - 472
Target Start/End: Original strand, 19848638 - 19848866
Alignment:
| Q |
244 |
gaaatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcata |
343 |
Q |
| |
|
|||||||||| |||||| || ||||||| | || |||||||| || ||||| |||| ||||||||| || |||| ||| |||||| ||| | || |
|
|
| T |
19848638 |
gaaatgggtttcttgggttcataaacttaaacaaaactatgaatctgtgtggaagaaagttggaatctttgatgctattatggccactaagtgctactta |
19848737 |
T |
|
| Q |
344 |
attaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaag |
443 |
Q |
| |
|
| |||||||||| ||||| | |||| | ||||||||||||||| | | ||||| |||||||||||| ||||||||||||||||||||| |||| | |
|
|
| T |
19848738 |
aataaaaatcaaaacttgctagttggggtagttgagaaatggtgtcctaatacaaatacctttgtgttttcctttggtgaagcaacaatcactttggagg |
19848837 |
T |
|
| Q |
444 |
atgtcattgttttggagggttatcctgtt |
472 |
Q |
| |
|
|| |||| ||| | | ||||||||||||| |
|
|
| T |
19848838 |
atatcatggttctagggggttatcctgtt |
19848866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 849 - 920
Target Start/End: Original strand, 19832142 - 19832213
Alignment:
| Q |
849 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttg |
920 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| ||||| |||||||||||||| || |||||||||| |||| |
|
|
| T |
19832142 |
caatcacccttttacttggttcaaatttgggtgtgggagaggttcaaaaatttacatccacaacccatgttg |
19832213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 850 - 920
Target Start/End: Complemental strand, 20036447 - 20036377
Alignment:
| Q |
850 |
aatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttg |
920 |
Q |
| |
|
|||||||||||||| |||||||| ||||||| ||||| |||||||||||||| || |||||||||| |||| |
|
|
| T |
20036447 |
aatcacccttttacttggttcaaatttgggtgtgggagaggttcaaaaatttacaaccacaacccatgttg |
20036377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 837 - 913
Target Start/End: Original strand, 19838654 - 19838730
Alignment:
| Q |
837 |
gaagttaatgtacaatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacc |
913 |
Q |
| |
|
||||||| | | ||||||||||||||| |||||||| ||||||| ||||| |||||||||||||| || |||||||| |
|
|
| T |
19838654 |
gaagttactcttcaatcacccttttacttggttcaaatttgggtgtgggagaggttcaaaaatttacaaccacaacc |
19838730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 849 - 915
Target Start/End: Original strand, 19951394 - 19951460
Alignment:
| Q |
849 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaaccca |
915 |
Q |
| |
|
||||||||||||||| |||||||| ||||| ||||||| ||||| |||||||| || |||||||||| |
|
|
| T |
19951394 |
caatcacccttttacttggttcaaatttggatttgggagaggtttaaaaatttacaaccacaaccca |
19951460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 850 - 910
Target Start/End: Original strand, 19849264 - 19849324
Alignment:
| Q |
850 |
aatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccaca |
910 |
Q |
| |
|
||||||||||||| |||||||| ||||||| ||||| ||||||||||||||||| ||||| |
|
|
| T |
19849264 |
aatcacccttttatttggttcaaatttgggtgtgggagaggttcaaaaatttgcaaccaca |
19849324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 471
Target Start/End: Complemental strand, 20016694 - 20016439
Alignment:
| Q |
216 |
atttcaatgggtggcactacccacaagagaaatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcga |
315 |
Q |
| |
|
|||||| |||||||| | |||||||||| ||||||||| ||||||||| | ||||| | || |||||||| || ||||| | | ||||||||| || |
|
|
| T |
20016694 |
atttcactgggtggcgccacccacaagacaaatgggtttgttgggttgatcagcttaaaacaaagtatgaatctgtgtggaagcaggttggaatctttga |
20016595 |
T |
|
| Q |
316 |
acctataatgagtactaagagctgcataattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttcta |
415 |
Q |
| |
|
|||| ||||| || ||| | ||||| | | ||||||| ||||| | | || | ||| ||||||||||||| | | ||||| || |||||||||| | |
|
|
| T |
20016594 |
tgctattatgagcaccaagtgtcgcatactgagaaatcaaaacttgctatatgaggttgcggagaaatggtgttctaagacaaatacatttgtgtttcca |
20016495 |
T |
|
| Q |
416 |
tttggtgaagcaacaatcactatggaagatgtcattgttttggagggttatcctgt |
471 |
Q |
| |
|
|||| |||||| ||||||||| |||| ||| | || ||||||| ||||| ||||| |
|
|
| T |
20016494 |
tttgctgaagctacaatcactttggaggatattatggttttgggtggttaccctgt |
20016439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 855 - 952
Target Start/End: Original strand, 17114992 - 17115089
Alignment:
| Q |
855 |
cccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgatcgataatcgagaccatgtattgttgaggtg |
952 |
Q |
| |
|
||||||||| |||||||| ||||| | ||||| |||||||||||||| || |||||| ||| ||||||| | || |||||| | ||||||| ||||| |
|
|
| T |
17114992 |
cccttttacttggttcaaatttggatgtgggagaggttcaaaaatttacaaccacaatccatgttgatcaaccatggagaccctttattgtttaggtg |
17115089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 461 - 504
Target Start/End: Original strand, 26651916 - 26651959
Alignment:
| Q |
461 |
ggttatcctgttttcacccaacttgaagatcaggagatgagaga |
504 |
Q |
| |
|
|||||||||||||| ||||||||||| |||| |||||||||||| |
|
|
| T |
26651916 |
ggttatcctgtttttacccaacttgatgatccggagatgagaga |
26651959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 19837889 - 19837926
Alignment:
| Q |
86 |
agaactgtccattttcttaaacctattgcaaattccat |
123 |
Q |
| |
|
||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
19837889 |
agaactgcccattttcttaaacctattgcaaactccat |
19837926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 132; Significance: 5e-68; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 578 - 948
Target Start/End: Complemental strand, 22689774 - 22689422
Alignment:
| Q |
578 |
gtggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttg |
677 |
Q |
| |
|
|||||||||| ||||||||||||| |||| |||| |||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| | | | |
|
|
| T |
22689774 |
gtggatggatgttttcatcgataatggtaatgaatttgaacatgaagcatttcttgctacttggttgtcaatttttgtttttcctcataaaaatatgtcg |
22689675 |
T |
|
| Q |
678 |
gtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
777 |
Q |
| |
|
|| ||||||||||||||| ||||| |||||||| |||||||| | | ||||| |||||||||||||||||||||||||| ||||||||||||| || | |
|
|
| T |
22689674 |
gtcaaaagttctttgtttactatttctattcatctggctagaggcaatactattgctttggcacctgctgttttggctagcatatataaggatttgagtt |
22689575 |
T |
|
| Q |
778 |
tgtttaagaacacaattgttgatttcaaaaaatgtcctgataaatttccttttatgttggaagttaatgtacaatcacccttttacctggttcaagtttg |
877 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| | || |||||| | ||||||||||||||| ||||||||||||| |
|
|
| T |
22689574 |
tgtttaagaaacaaattgttgatttcaaaaaatgtcctg------------------ttgatgttaatctgcaatcacccttttacttggttcaagtttg |
22689493 |
T |
|
| Q |
878 |
ggtttgggaaaggttcaaaaatttgcagccacaacccaagttgatcgataatcgagaccatgtattgttga |
948 |
Q |
| |
|
||| ||||| ||||||||||||||||| |||| |||| ||||||| ||| | |||||||||||| |||| |
|
|
| T |
22689492 |
ggtgtgggagaggttcaaaaatttgcaaccacggcccatgttgatcaatagtgaagaccatgtattattga |
22689422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 818 - 952
Target Start/End: Original strand, 11544312 - 11544446
Alignment:
| Q |
818 |
taaatttccttttatgttggaagttaatgtacaatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaag |
917 |
Q |
| |
|
||||||||| || | |||||| ||| |||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||| ||| |||||||| |
|
|
| T |
11544312 |
taaatttccattgaagttggaggttgatgtgcaatcacccatttacttggttcaagtttgggtttgggagaggttcaaaaatttgcaaccaaaacccaag |
11544411 |
T |
|
| Q |
918 |
ttgatcgataatcgagaccatgtattgttgaggtg |
952 |
Q |
| |
|
|||||| | ||| ||||||||||| || ||||||| |
|
|
| T |
11544412 |
ttgatcaacaatggagaccatgtactgatgaggtg |
11544446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 599 - 738
Target Start/End: Complemental strand, 22685778 - 22685642
Alignment:
| Q |
599 |
taaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttggtgaaaagttctttgtttcct |
698 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||| ||||||||||| |||| ||||||| |
|
|
| T |
22685778 |
taaaggtagtgaaattgagcatgaagcatttcttgctgcttggttgtcactttttgtttttcctcataaa---attttggtgaaaacttctatgtttccg |
22685682 |
T |
|
| Q |
699 |
attgtcattcatctagctagagggattcctatttctttgg |
738 |
Q |
| |
|
|||| |||||||| |||||||||| ||||||| |||||| |
|
|
| T |
22685681 |
attgctattcatcttgctagagggaatcctattgctttgg |
22685642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 579 - 672
Target Start/End: Complemental strand, 22652206 - 22652113
Alignment:
| Q |
579 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatact |
672 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| |||||| ||||| |
|
|
| T |
22652206 |
tggatggatattttcatcgataaaggtagtgaaattgaacatgaagcgttccttgctacttggttgtcaatttttgtttttgctcatagatact |
22652113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 678 - 802
Target Start/End: Complemental strand, 22651912 - 22651788
Alignment:
| Q |
678 |
gtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
777 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||| |||||||| | ||||||| |||| ||||| ||||||||||||||| | ||||||||||||| | |
|
|
| T |
22651912 |
gtgaaaagttgtttgtttcctattgctgttcatcttgctagaggaaatcctattgcttttgcaccagctgttttggctagcatgtataaggatttaactt |
22651813 |
T |
|
| Q |
778 |
tgtttaagaacacaattgttgattt |
802 |
Q |
| |
|
|||||||||| |||||||||||||| |
|
|
| T |
22651812 |
tgtttaagaaaacaattgttgattt |
22651788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 599 - 904
Target Start/End: Complemental strand, 11564232 - 11563918
Alignment:
| Q |
599 |
taaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttggtgaaaagttctttgtttcct |
698 |
Q |
| |
|
||||| |||| ||||||| ||||||||||| || || | ||| | || ||||||||||| ||||||||| || ||| | |||||||||||||||||| |
|
|
| T |
11564232 |
taaagctagtaaaattgaacatgaagcattcatttctgcatggctttccatttttgtttttcctcataaaagcttgttgatcaaaagttctttgtttcct |
11564133 |
T |
|
| Q |
699 |
attgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacacaattgttg |
798 |
Q |
| |
|
|||| ||||||| |||||||| | |||||| |||| ||||| | ||| ||||| |||||||||||||||| | ||||||||| | |||||||||| |
|
|
| T |
11564132 |
attgctgttcatcttgctagaggaaaacctattgctttagcaccgtcggttctggcttgcttatataaggatttgcgtttgtttaaggagacaattgttg |
11564033 |
T |
|
| Q |
799 |
atttcaaaaaatgtcc---------tgataaatttccttttatgttggaagttaatgtacaatcacccttttacctggttcaagtttgggtttgggaaag |
889 |
Q |
| |
|
|| | |||| | | || ||||||||| || | | |||| |||||||||||||||||| ||||| ||||| |||||||| ||||||| || |
|
|
| T |
11564032 |
gattgacaaaaactacaacagaaggtgctaaatttccattgaaggtggaggttaatgtacaatcacccatttacttggttaaagtttggctttgggagag |
11563933 |
T |
|
| Q |
890 |
gttcaaaaatttgca |
904 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
11563932 |
gttcaaaaatttgca |
11563918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 22652432 - 22652327
Alignment:
| Q |
367 |
tgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaagatgtcattgttttggagggttat |
466 |
Q |
| |
|
|||| |||||||||||||||| ||||| |||||| | |||||||||| ||||||||| ||||| ||||| | |||||||| || |||| |||||||| |
|
|
| T |
22652432 |
tggggttgttgagaaatggtgctgtgagacaaactcatttgtgtttccatttggtgaggcaactatcaccttagaagatgttatgattttagagggttac |
22652333 |
T |
|
| Q |
467 |
cctgtt |
472 |
Q |
| |
|
|||||| |
|
|
| T |
22652332 |
cctgtt |
22652327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 100; Significance: 6e-49; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 579 - 802
Target Start/End: Complemental strand, 26355045 - 26354822
Alignment:
| Q |
579 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
678 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||| |||| ||||||||||| ||| | ||||||| |||||||||||||| ||| |||| | |||| |
|
|
| T |
26355045 |
tggatggatgttttcatggataaaggtagtgaagttgaacatgaagcattcattgttgcttggttatcaatttttgtttttcctagaaaatgcatgttgg |
26354946 |
T |
|
| Q |
679 |
tgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
778 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||||| | | ||||| |||||||||| |||||||| |||||| |||||||||||||||| | |
|
|
| T |
26354945 |
tgaaaagttctttgtttcctattgctattcatcttgctagaggaaattctattgctttggcaccggctgttttagctagcatatataaggatttaagcgt |
26354846 |
T |
|
| Q |
779 |
gtttaagaacacaattgttgattt |
802 |
Q |
| |
|
||||||||| || ||||||||||| |
|
|
| T |
26354845 |
gtttaagaaaaccattgttgattt |
26354822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 579 - 952
Target Start/End: Original strand, 9815037 - 9815410
Alignment:
| Q |
579 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
678 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||||||||||| || ||||||| ||||| ||||| |||||||| ||||||||| |||||| |
|
|
| T |
9815037 |
tggatggattttttcatcgacaaaggtagtgaaattgagcatgaagcgttcattgctacgtggttgtcaatctttgttttaactcataaat---ctttgg |
9815133 |
T |
|
| Q |
679 |
tgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
778 |
Q |
| |
|
||||||||||||||||| |||||| |||||||| |||||||| | | ||||| |||||||||| |||||||| ||||| | ||||| |||||||| || |
|
|
| T |
9815134 |
tgaaaagttctttgttttctattgctattcatcttgctagaggaaattctattgctttggcaccagctgttttagctagtatttataacgatttaagttt |
9815233 |
T |
|
| Q |
779 |
gtttaagaacacaattgttgatttcaaaaaat---------gtcctgataaatttccttttatgttggaagttaatgtacaatcacccttttacctggtt |
869 |
Q |
| |
|
||||||||| ||||| ||| |||| ||||| || ||||| || |||||| ||||||| | | ||||||||||||||| ||||| |
|
|
| T |
9815234 |
gtttaagaaaacaatagttaatttgtcaaaattatctgttggtggtgatagatatccttta------gaagttactcttcaatcacccttttacttggtt |
9815327 |
T |
|
| Q |
870 |
caagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgatcgataatcgagaccatgtattgttgaggtg |
952 |
Q |
| |
|
||| ||||||| ||||| |||||| ||||||| |||||| |||||| ||||||| || | |||||| | ||||||| ||||| |
|
|
| T |
9815328 |
caaatttgggtgtgggagaggttccaaaatttacagccagaacccatgttgatcaatcacggagaccctttattgtttaggtg |
9815410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 216 - 471
Target Start/End: Original strand, 9814660 - 9814915
Alignment:
| Q |
216 |
atttcaatgggtggcactacccacaagagaaatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcga |
315 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||| || | ||||||||| ||||||| || || |||||||| | ||||| |||| || ||||| || |
|
|
| T |
9814660 |
atttcaatggatggcgttacccacaagagaaatggatttattgggttgatcaacttaaaccaaagtatgaatctttgtggaagaaagtaggtatctttga |
9814759 |
T |
|
| Q |
316 |
acctataatgagtactaagagctgcataattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttcta |
415 |
Q |
| |
|
||||||||||||| ||| || ||||||| ||| ||||| ||||| | | |||| |||||||||||||||||||| | || || || |||||||||| |
|
|
| T |
9814760 |
tgctataatgagtaccaagtgccgcataatgaaagatcaaaacttgctatatggggttgttgagaaatggtgttgtaagacgaatacatttgtgtttccg |
9814859 |
T |
|
| Q |
416 |
tttggtgaagcaacaatcactatggaagatgtcattgttttggagggttatcctgt |
471 |
Q |
| |
|
|||||||| || || || | | |||| ||||| || ||||||| |||||||||||| |
|
|
| T |
9814860 |
tttggtgaggcgacgattagtttggaggatgttatggttttggggggttatcctgt |
9814915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 257 - 423
Target Start/End: Complemental strand, 26355381 - 26355215
Alignment:
| Q |
257 |
tgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcataattaaaaatcaag |
356 |
Q |
| |
|
||||||||| ||||||||| |||||||||| | || ||||| |||||||| || || || ||||||||||||| || || ||||| | ||||||||| |
|
|
| T |
26355381 |
tgggttgatcaacttaagctcaaatatgaaccggtttggaagaaagctgggatttttgatgctataatgagtaccaaatgccgcatactgaaaaatcaaa |
26355282 |
T |
|
| Q |
357 |
acttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtga |
423 |
Q |
| |
|
||||| ||| ||| |||| ||||||||||||||||| || || || |||||||||| |||||||| |
|
|
| T |
26355281 |
acttgctttacggggttgtggagaaatggtgttgtgagactaatacatttgtgtttccgtttggtga |
26355215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 38435523 - 38435375
Alignment:
| Q |
319 |
tataatgagtactaagagctgcataattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctattt |
418 |
Q |
| |
|
||||||||||||||| ||| |||| ||||||||| ||||| | | | || |||||||||||||||||||| | || || || |||||||||| | || |
|
|
| T |
38435523 |
tataatgagtactaaatgctacatacataaaaatcataacttgttatttagggttgttgagaaatggtgttgtaagaccaatacatttgtgtttccactt |
38435424 |
T |
|
| Q |
419 |
ggtgaagcaacaatcactatggaagatgtcattgttttggagggttatcc |
468 |
Q |
| |
|
|||| ||||||||||||| | |||||| |||| ||||||| ||||||||| |
|
|
| T |
38435423 |
ggtgtagcaacaatcacttttgaagatatcatggttttgg-gggttatcc |
38435375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 849 - 923
Target Start/End: Complemental strand, 26354772 - 26354698
Alignment:
| Q |
849 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgatc |
923 |
Q |
| |
|
|||||||| |||||| |||||||| ||||||| ||||| ||||||||||| || || || ||||||| ||||||| |
|
|
| T |
26354772 |
caatcaccgttttacttggttcaaatttgggtgtgggagaggttcaaaaaattacaaccgcaacccatgttgatc |
26354698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 99; Significance: 2e-48; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 570 - 798
Target Start/End: Original strand, 1717205 - 1717430
Alignment:
| Q |
570 |
acaacagtgtggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaat |
669 |
Q |
| |
|
|||||| | ||||||||| |||| | |||||||||||||||||||| |||||||||||||||||||||||||| || ||| |||||| ||||||||| |
|
|
| T |
1717205 |
acaacattatggatggatgtttttgttgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcggtttatgtttttcctcataaag |
1717304 |
T |
|
| Q |
670 |
actctttggtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataagga |
769 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||||| |||||||| | ||||||| |||||||||| |||||||| |||||| |||||||||| |
|
|
| T |
1717305 |
---ctttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatcctattgctttggcaccggctgttttagctagcatatataagga |
1717401 |
T |
|
| Q |
770 |
tttaaggttgtttaagaacacaattgttg |
798 |
Q |
| |
|
||||| ||||||||||| ||||| |||| |
|
|
| T |
1717402 |
tttaactttgtttaagaaaacaatagttg |
1717430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 245 - 441
Target Start/End: Original strand, 1716863 - 1717062
Alignment:
| Q |
245 |
aaatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgc---a |
341 |
Q |
| |
|
||||||| ||||||||||||||||||||| | |||| ||||| |||| ||||| |||| ||| ||||| ||| |||||||||| || ||| | | | |
|
|
| T |
1716863 |
aaatgggataagtgggttgatgaacttaaactcaaacatgaaacagtgtggaagaaagttggcatctttgaagctataatgagcaccaagtgtcgtcgta |
1716962 |
T |
|
| Q |
342 |
taattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatgga |
441 |
Q |
| |
|
||| ||||||||| ||||| | | |||||||||||| |||||||||||||| ||||| || |||||||||| ||||||||||| ||||||||| |||| |
|
|
| T |
1716963 |
taaagaaaaatcaaaacttgttatatgggattgttgaaaaatggtgttgtgagacaaatacatttgtgtttccttttggtgaagccacaatcactttgga |
1717062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 318 - 462
Target Start/End: Complemental strand, 34408481 - 34408336
Alignment:
| Q |
318 |
ctataatgagtactaagagctgcataattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatt |
417 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||||||||||| | || | ||||||| ||| ||| ||||||||| ||||| |||||||||||| | || |
|
|
| T |
34408481 |
ctataatgagtacttagagttgcataaagaaaaatcaagacttcgattataggattgtcgagtaatagtgttgtgagacaaatacctttgtgtttttctt |
34408382 |
T |
|
| Q |
418 |
t-ggtgaagcaacaatcactatggaagatgtcattgttttggaggg |
462 |
Q |
| |
|
| ||||| | |||||||||| |||| ||||| || ||||||||||| |
|
|
| T |
34408381 |
taggtgatggaacaatcactttggatgatgtgatggttttggaggg |
34408336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 53; Significance: 7e-21; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 579 - 802
Target Start/End: Complemental strand, 6397856 - 6397634
Alignment:
| Q |
579 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
678 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| |||||||| || |||||||| ||||| ||||||| || ||| |||| |||| | ||| |
|
|
| T |
6397856 |
tggatggatatgttcatcgataaaggtagtgaaattgaacatgaagccttccttgctacctggttgtcaatttgtgcttttcctcctaaaaa---aatgg |
6397760 |
T |
|
| Q |
679 |
tgaaaag--ttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaagg |
776 |
Q |
| |
|
||||||| || |||| || ||||| || |||| ||||||| | ||| ||| |||||||||| |||||||||||| | |||||||||||||| |
|
|
| T |
6397759 |
tgaaaagttttgtttgctttctattaatgttaatcttgctagagaaaatccaattgctttggcaccatctgttttggctatcatatataaggatttatct |
6397660 |
T |
|
| Q |
777 |
ttgtttaagaacacaattgttgattt |
802 |
Q |
| |
|
|| |||||||| |||||| ||||||| |
|
|
| T |
6397659 |
ttatttaagaaaacaattattgattt |
6397634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 579 - 787
Target Start/End: Original strand, 6398261 - 6398468
Alignment:
| Q |
579 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
678 |
Q |
| |
|
||||||||||| || ||| ||||||||||||||||||| |||||||| || ||||||| |||||| | |||||||||||| ||| |||| | ||| |
|
|
| T |
6398261 |
tggatggatatgtttatctataaaggtagtgaaattgaacatgaagccttccttgctaattggttgttaatttttgtttttcctagtaaa---acaatgg |
6398357 |
T |
|
| Q |
679 |
tgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagc--ttatataaggatttaagg |
776 |
Q |
| |
|
||||||||| ||||||| |||||| || |||| |||||||| | ||| || ||||||||| |||||||| |||||| ||||||||||||||| |
|
|
| T |
6398358 |
tgaaaagttgtttgttttctattgctgttaatctcgctagaggaaatccaatcggtttggcaccagctgttttagctagcatatatataaggatttaact |
6398457 |
T |
|
| Q |
777 |
ttgtttaagaa |
787 |
Q |
| |
|
|| |||||||| |
|
|
| T |
6398458 |
ttatttaagaa |
6398468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 852 - 923
Target Start/End: Original strand, 6398537 - 6398608
Alignment:
| Q |
852 |
tcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgatc |
923 |
Q |
| |
|
||||| |||||| |||||||||||| ||| ||||| ||||||| ||| ||||| ||||||| || ||||||| |
|
|
| T |
6398537 |
tcacctttttacgtggttcaagtttaggtgtgggagaggttcacaaacttgcaaccacaactcatgttgatc |
6398608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 611 - 800
Target Start/End: Original strand, 12497241 - 12497427
Alignment:
| Q |
611 |
aattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttggtgaaaagttctttgtttcctattgtcattcat |
710 |
Q |
| |
|
|||||| |||||||| || |||||||| ||||| |||||||||||||| ||||||| | | |||||| ||||| ||||||| |||||| ||| || |
|
|
| T |
12497241 |
aattgaacatgaagccttccttgctacctggttgtcaatttttgtttttcctcatagaaa---aatggtgataagttatttgttttctattgctattaat |
12497337 |
T |
|
| Q |
711 |
ctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacacaattgttgat |
800 |
Q |
| |
|
|| |||||| | | || ||| ||||| | || ||||||||||||||| || |||| ||||||| || |||||||| |||||| ||||| |
|
|
| T |
12497338 |
cttgctagaagaaatcaaattactttgccgccagctgttttggctagcataaataacgatttaactttatttaagaaaacaattattgat |
12497427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 611 - 800
Target Start/End: Original strand, 12521106 - 12521292
Alignment:
| Q |
611 |
aattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttggtgaaaagttctttgtttcctattgtcattcat |
710 |
Q |
| |
|
|||||| |||||||| || |||||||| ||||| |||||||||||||| ||||||| | | |||||| ||||| ||||||| |||||| ||| || |
|
|
| T |
12521106 |
aattgaacatgaagccttccttgctacctggttgtcaatttttgtttttcctcatagaaa---aatggtgataagttatttgttttctattgctattaat |
12521202 |
T |
|
| Q |
711 |
ctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacacaattgttgat |
800 |
Q |
| |
|
|| |||||| | | || ||| ||||| | || ||||||||||||||| || |||| ||||||| || |||||||| |||||| ||||| |
|
|
| T |
12521203 |
cttgctagaagaaatcaaattactttgccgccagctgttttggctagcataaataacgatttaactttatttaagaaaacaattattgat |
12521292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 611 - 800
Target Start/End: Original strand, 12581424 - 12581610
Alignment:
| Q |
611 |
aattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttggtgaaaagttctttgtttcctattgtcattcat |
710 |
Q |
| |
|
|||||| |||||||| || |||||||||||||| |||||||||||||| |||| || | | |||||||||||| ||||||| |||||| ||| || |
|
|
| T |
12581424 |
aattgaacatgaagccttccttgctacttggttgtcaatttttgtttttcctcgtagaaa---aatggtgaaaagttatttgttttctattgctattaat |
12581520 |
T |
|
| Q |
711 |
ctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacacaattgttgat |
800 |
Q |
| |
|
|| |||||| | | || ||| ||||| | | |||||||||||||| || |||||||||||| || |||||||| |||||| ||||| |
|
|
| T |
12581521 |
cttgctagaagaaatcgaattactttgccgcaaactgttttggctagcataaataaggatttaactttatttaagaaaacaattattgat |
12581610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 579 - 616
Target Start/End: Original strand, 12496285 - 12496322
Alignment:
| Q |
579 |
tggatggatattttcatcgataaaggtagtgaaattga |
616 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
12496285 |
tggatggatatgttcatcgataaatgtagtgaaattga |
12496322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 579 - 616
Target Start/End: Original strand, 12520150 - 12520187
Alignment:
| Q |
579 |
tggatggatattttcatcgataaaggtagtgaaattga |
616 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
12520150 |
tggatggatatgttcatcgataaatgtagtgaaattga |
12520187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 579 - 616
Target Start/End: Original strand, 12580439 - 12580476
Alignment:
| Q |
579 |
tggatggatattttcatcgataaaggtagtgaaattga |
616 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
12580439 |
tggatggatatgttcatcgataaatgtagtgaaattga |
12580476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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