View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4439-Insertion-8 (Length: 232)
Name: NF4439-Insertion-8
Description: NF4439
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4439-Insertion-8 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 8 - 232
Target Start/End: Original strand, 46312134 - 46312357
Alignment:
| Q |
8 |
gaaccacataacaaagataaaagatacaaacatgccaaaaacttgactacccaaattgacatacgttggggagagagagcatatctacaatccactatta |
107 |
Q |
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| T |
46312134 |
gaaccacataacaaagataaaagatacaaacatgccaaaaacttgactacccaaattgacatacgttggggagagagagcagatctacaatccact-tta |
46312232 |
T |
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| Q |
108 |
aagagtctttataagagatataaaaaagttataagaaatgaattgcaacaatctctctgagagcaaccctaaatccaacatcttctcccactctctccgt |
207 |
Q |
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| T |
46312233 |
aagagtctttataagagatataaaaaagttataagaaatgaattgcaacaatctctctgagaacaaccctaaatccaacatcttctcccactctctccgt |
46312332 |
T |
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| Q |
208 |
atggccaatagagttagaaaagtga |
232 |
Q |
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|||||||||| |||||||||||||| |
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| T |
46312333 |
atggccaataaagttagaaaagtga |
46312357 |
T |
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