View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4443-Insertion-8 (Length: 303)

Name: NF4443-Insertion-8
Description: NF4443
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4443-Insertion-8
NF4443-Insertion-8
[»] chr7 (18 HSPs)
chr7 (121-303)||(37537555-37537737)
chr7 (132-303)||(8932287-8932458)
chr7 (132-303)||(15844260-15844431)
chr7 (132-303)||(15861369-15861540)
chr7 (133-303)||(13317512-13317682)
chr7 (121-303)||(36302388-36302569)
chr7 (121-300)||(18569155-18569335)
chr7 (121-232)||(33557836-33557947)
chr7 (121-269)||(10664208-10664354)
chr7 (115-269)||(21659583-21659735)
chr7 (121-269)||(9044781-9044928)
chr7 (121-269)||(38293634-38293782)
chr7 (121-269)||(18986037-18986182)
chr7 (121-208)||(19000724-19000810)
chr7 (121-208)||(30236276-30236363)
chr7 (121-205)||(42567371-42567453)
chr7 (241-303)||(15578450-15578513)
chr7 (121-208)||(33058878-33058964)
[»] scaffold0022 (1 HSPs)
scaffold0022 (121-303)||(126659-126841)
[»] chr3 (15 HSPs)
chr3 (121-303)||(21850603-21850785)
chr3 (121-303)||(3529023-3529202)
chr3 (132-269)||(25200312-25200449)
chr3 (121-269)||(6001518-6001664)
chr3 (121-269)||(12155898-12156045)
chr3 (151-287)||(29930651-29930785)
chr3 (151-287)||(29979805-29979939)
chr3 (121-269)||(48629664-48629815)
chr3 (121-269)||(3162212-3162359)
chr3 (148-269)||(12147870-12147990)
chr3 (148-269)||(12151996-12152116)
chr3 (121-198)||(12919288-12919365)
chr3 (121-250)||(19165613-19165740)
chr3 (241-303)||(14523533-14523596)
chr3 (217-269)||(12919234-12919285)
[»] scaffold1716 (1 HSPs)
scaffold1716 (121-303)||(812-994)
[»] chr2 (10 HSPs)
chr2 (122-303)||(28346867-28347048)
chr2 (121-303)||(19197295-19197483)
chr2 (132-287)||(36737699-36737852)
chr2 (121-287)||(36733545-36733709)
chr2 (121-232)||(19818668-19818779)
chr2 (121-232)||(30213069-30213180)
chr2 (121-269)||(45526892-45527037)
chr2 (121-269)||(45535363-45535508)
chr2 (122-208)||(19644048-19644133)
chr2 (121-303)||(14181206-14181385)
[»] chr1 (6 HSPs)
chr1 (121-303)||(34391210-34391393)
chr1 (121-287)||(35892700-35892866)
chr1 (135-232)||(20709691-20709788)
chr1 (121-269)||(28452763-28452911)
chr1 (121-250)||(21191007-21191135)
chr1 (261-303)||(21351073-21351115)
[»] chr6 (12 HSPs)
chr6 (121-303)||(1817304-1817486)
chr6 (121-303)||(30674973-30675155)
chr6 (121-303)||(29043491-29043673)
chr6 (121-269)||(10444345-10444493)
chr6 (121-232)||(35055505-35055616)
chr6 (133-269)||(31347482-31347618)
chr6 (121-269)||(3008513-3008659)
chr6 (121-269)||(18451260-18451406)
chr6 (121-232)||(13803452-13803563)
chr6 (121-232)||(17736245-17736356)
chr6 (121-208)||(24507009-24507096)
chr6 (241-303)||(18400512-18400575)
[»] chr5 (6 HSPs)
chr5 (121-284)||(30609468-30609631)
chr5 (121-269)||(21402918-21403064)
chr5 (121-269)||(21401528-21401674)
chr5 (136-269)||(23295386-23295517)
chr5 (121-205)||(20311849-20311932)
chr5 (121-167)||(21402701-21402747)
[»] chr8 (13 HSPs)
chr8 (121-303)||(22618223-22618406)
chr8 (121-287)||(23884835-23884999)
chr8 (121-235)||(20518859-20518973)
chr8 (121-269)||(22709610-22709756)
chr8 (132-269)||(38049692-38049828)
chr8 (121-269)||(7464380-7464527)
chr8 (121-269)||(20877959-20878106)
chr8 (132-205)||(21678015-21678087)
chr8 (121-205)||(21684387-21684470)
chr8 (121-205)||(21688736-21688819)
chr8 (241-303)||(36407073-36407136)
chr8 (241-303)||(36734324-36734387)
chr8 (241-274)||(22472906-22472939)
[»] scaffold0125 (3 HSPs)
scaffold0125 (121-232)||(3227-3338)
scaffold0125 (121-232)||(44229-44340)
scaffold0125 (121-269)||(7811-7957)
[»] chr4 (7 HSPs)
chr4 (121-232)||(10282339-10282450)
chr4 (121-232)||(14354963-14355074)
chr4 (121-269)||(9620805-9620951)
chr4 (121-232)||(10271617-10271728)
chr4 (121-287)||(14475895-14476060)
chr4 (241-303)||(19567687-19567750)
chr4 (121-160)||(12621513-12621552)
[»] scaffold0148 (1 HSPs)
scaffold0148 (121-269)||(7326-7474)
[»] scaffold0035 (3 HSPs)
scaffold0035 (121-269)||(27155-27302)
scaffold0035 (121-208)||(40685-40771)
scaffold0035 (133-208)||(45264-45338)
[»] scaffold0117 (1 HSPs)
scaffold0117 (121-269)||(22545-22692)
[»] scaffold0217 (1 HSPs)
scaffold0217 (122-269)||(27095-27241)
[»] scaffold0337 (1 HSPs)
scaffold0337 (121-208)||(2277-2364)
[»] scaffold0092 (1 HSPs)
scaffold0092 (121-269)||(39309-39456)
[»] scaffold0007 (1 HSPs)
scaffold0007 (121-193)||(83658-83729)
[»] scaffold0004 (1 HSPs)
scaffold0004 (220-303)||(72428-72511)
[»] scaffold0017 (1 HSPs)
scaffold0017 (121-250)||(22072-22200)
[»] scaffold0708 (1 HSPs)
scaffold0708 (121-207)||(1052-1138)
[»] scaffold0394 (1 HSPs)
scaffold0394 (121-198)||(9006-9081)
[»] scaffold0100 (1 HSPs)
scaffold0100 (262-303)||(10790-10831)
[»] scaffold0058 (1 HSPs)
scaffold0058 (121-208)||(61327-61414)


Alignment Details
Target: chr7 (Bit Score: 151; Significance: 6e-80; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 121 - 303
Target Start/End: Original strand, 37537555 - 37537737
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37537555 gtaacaccccattttcccaacatataaataatataaaatagatcagagttcatcacaaacaggatgtcacatttcgttcttcaaaataatatttaacaca 37537654  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||||||||||||||||||||||| ||| |||||||||||    
T  37537655 aatagagttaaaaaccactctttatttaaaccatctgctttcaataattttcaacaacgtcgcagcggaaaataattattctt 37537737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 132 - 303
Target Start/End: Complemental strand, 8932458 - 8932287
Alignment:
Q  132 ttttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacacaaatagagttaa 231  Q
    |||||||||||||||||||||||||||||||||||| || ||| |||||||||| ||||| || ||||||||||||||||||||||||||||||||||||    
T  8932458 ttttcccaacatataaataatataaaatagatcagagtttatcgcaaacaggatgtcacagtttgttcttcaaaataatatttaacacaaatagagttaa 8932359  T
Q  232 aatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||  ||||| |||||||||||    
T  8932358 aatccactctttatttaaatcatctgcttccaataattttcaaaaacgtcgcaatgaaaaataattattctt 8932287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 132 - 303
Target Start/End: Complemental strand, 15844431 - 15844260
Alignment:
Q  132 ttttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacacaaatagagttaa 231  Q
    |||||||||||| ||||||||||||| ||||||||| |||||||||||||  || | ||||||||||||||||||||||| ||||||||||||||||| |    
T  15844431 ttttcccaacatgtaaataatataaattagatcagagttcatcacaaacataatgtaacatttcgttcttcaaaataataattaacacaaatagagttga 15844332  T
Q  232 aatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||    
T  15844331 aatccactctttatttaaatcatctgcttccaataattttcaacaacgtcgcagtggaaaataattattctt 15844260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 132 - 303
Target Start/End: Complemental strand, 15861540 - 15861369
Alignment:
Q  132 ttttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacacaaatagagttaa 231  Q
    |||||||||||| ||||||||||||| ||||||||| |||||||||||||  || | ||||||||||||||||||||||| ||||||||||||||||| |    
T  15861540 ttttcccaacatgtaaataatataaattagatcagagttcatcacaaacataatgtaacatttcgttcttcaaaataataattaacacaaatagagttga 15861441  T
Q  232 aatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||    
T  15861440 aatccactctttatttaaatcatctgcttccaataattttcaacaacgtcgcagtggaaaataattattctt 15861369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 133 - 303
Target Start/End: Complemental strand, 13317682 - 13317512
Alignment:
Q  133 tttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacacaaatagagttaaa 232  Q
    |||||||||||||||||||||||||| | |||||| ||||||  ||| ||||| || ||||||||||||||||||| |||||||||||||||||||||||    
T  13317682 tttcccaacatataaataatataaaacaaatcagagttcatcgtaaataggatgtcgcatttcgttcttcaaaatattatttaacacaaatagagttaaa 13317583  T
Q  233 atccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| || ||||||||    
T  13317582 atccactctttatttaaatcatctgtttccaataattttcaacaacgtcgcagcggaaaatatttattctt 13317512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 121 - 303
Target Start/End: Complemental strand, 36302569 - 36302388
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||| ||||| |||| |||||||||||||||||||||||| |||||| |||||| |||||||||| |||||||||||||| || | || || ||||||||    
T  36302569 gtaataccccgtttttccaacatataaataatataaaataaatcagagttcatcgcaaacaggatgtcacatttcgttctacata-tattacttaacaca 36302471  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||| ||||||||||||| ||| || ||| || ||||||||    
T  36302470 aatagagttaaaatccactatttattcaaatcatctgcttccaatatttttcaacaacgttgcaacggaaaatatttattctt 36302388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 121 - 300
Target Start/End: Original strand, 18569155 - 18569335
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatattt-aacac 219  Q
    ||||||||  |||||||||||||||||||||||||| ||| |||||| |||||| ||||||| || ||||||||||||||||||| |||||||| |||||    
T  18569155 gtaacaccatattttcccaacatataaataatataacataaatcagagttcatcgcaaacagaatgtcacatttcgttcttcaaactaatatttaaacac 18569254  T
Q  220 aaatagagttaaaatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcgaaaattaattatt 300  Q
    ||||| ||||||||| || |||||||||||||||| |  ||||||||||||||||||| || |||| | ||| ||||||||    
T  18569255 aaatatagttaaaattcactctttatttaaatcatttatttccaataattttcaacaatgttgcaggggaaaataattatt 18569335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 33557947 - 33557836
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||||||  ||||||||||    
T  33557947 gtaacaccccgttttcccaacatataaataatataaaataaatcagagttcatcgcaaacaggatgtcacatttcgttcttcaaaatatcatttaacaca 33557848  T
Q  221 aatagagttaaa 232  Q
    ||||||||||||    
T  33557847 aatagagttaaa 33557836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 121 - 269
Target Start/End: Complemental strand, 10664354 - 10664208
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| |||||| |||||| ||| ||||||||||||||||||||||  ||||||||||    
T  10664354 gtaacaccccgttttcccaacatataaataatataaaataaatcagagttcatcgcaaacatgatgtcacatttcgttcttcaaaatatcatttaacaca 10664255  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||||||||| |||| || | |||||||||| || |||||| ||||||||    
T  10664254 aatagagtt-aaattcattatttatttaaa-caactgctttcaataatt 10664208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 115 - 269
Target Start/End: Original strand, 21659583 - 21659735
Alignment:
Q  115 gtttcagtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatattt 214  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||| |||||| |||||| |||| ||||| ||||||||||||||||||||||   |||    
T  21659583 gtttctgtaacaccccgttttcccaacatataaataatataaaataaatcagagttcatcgcaaataggatgtcacatttcgttcttcaaaatatctttt 21659682  T
Q  215 aacacaaatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||||||||||||||| |||| || | |||||||||| || |||||| ||||||||    
T  21659683 aacacaaatagagtt-aaattcactatttatttaaa-caactgctttcaataatt 21659735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 9044781 - 9044928
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||||||||||  ||| ||   |    
T  9044781 gtaacacctcgttttcccaacatataaataatataaaataaatcagagttcatcac-aacaggatgtcacatttcgttcttcaaaatatcattaaatgta 9044879  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||||||||||||||| | |||||||| ||| || |||||||||||||||    
T  9044880 aatagagttaaaatcaactctttattaaaagcaactgcttccaataatt 9044928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 38293634 - 38293782
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| |||||| |||||||||||||||||||||| |||||| |||||| |||| | ||| ||||||||||||||||||||||  ||| ||   |    
T  38293634 gtaacaccccgttttccgaacatataaataatataaaataaatcagagttcatcgcaaataagatgtcacatttcgttcttcaaaatatcattaaatgta 38293733  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||||| ||||||||| | | |||||||||| || |||||||||||||||    
T  38293734 aatagggttaaaatcaactttttatttaaagcaactgcttccaataatt 38293782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 121 - 269
Target Start/End: Complemental strand, 18986182 - 18986037
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| ||||||||||||| ||||||||| ||||| |||||| |||||||| |||| ||| |||||||||| |||||||||||  ||| ||   |    
T  18986182 gtaacaccccgttttcccaacataaaaataatattaaataaatcagagttcatcac-aacaagatgtcacatttcgctcttcaaaatatcattaaatgta 18986084  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||||||||| || |||| | |||||||||| || |||||| ||||||||    
T  18986083 aatagagtt-aagtccactatttatttaaa-caactgctttcaataatt 18986037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 19000810 - 19000724
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaata 208  Q
    |||||||||| ||||||||||||| ||||||||| ||||| |||||| |||||||| |||| ||| |||||||||| |||||||||||    
T  19000810 gtaacaccccgttttcccaacataaaaataatattaaataaatcagagttcatcac-aacaagatgtcacatttcgctcttcaaaata 19000724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 30236276 - 30236363
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaata 208  Q
    ||||||| || ||| |||||| ||||||| |||||| ||| |||||| ||||||| ||||||||| ||||||||||||||| ||||||    
T  30236276 gtaacactccgtttccccaacgtataaatgatataacataaatcagagttcatcataaacaggatgtcacatttcgttctttaaaata 30236363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 42567453 - 42567371
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaa 205  Q
    |||||||||| |||||||||||||| |||||||||||| | | |||| |||||||| |||| ||| |||||||||||||||||||    
T  42567453 gtaacaccccgttttcccaacatat-aataatataaaacaaaacagagttcatcac-aacaagatgtcacatttcgttcttcaaa 42567371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 303
Target Start/End: Complemental strand, 15578513 - 15578450
Alignment:
Q  241 tttatttaaatcatctgcttccaataattttcaa-caacgtcgcagcgaaaattaattattctt 303  Q
    |||||||||| |||||||||||||||||||||||  |||||||||||| ||| |||||||||||    
T  15578513 tttatttaaaacatctgcttccaataattttcaataaacgtcgcagcgtaaaataattattctt 15578450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 33058878 - 33058964
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaata 208  Q
    ||||||||  |||| || || ||||||||||||| ||||| || ||| |||||||| ||||| || ||||||||||||||| ||||||    
T  33058878 gtaacaccttatttccctaatatataaataatattaaataaattagagttcatcac-aacagtatgtcacatttcgttctttaaaata 33058964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 121 - 303
Target Start/End: Original strand, 126659 - 126841
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  126659 gtaacacccctttttcccaacatataaataatataaaatagatcagagttcatcacaaacaggatgtcacatttcgttcttcaaaataatatttaacaca 126758  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    ||||||||||||||||| ||| |||||||| |||||||| ||||||||||||||||||||||||||| ||| |||||||||||    
T  126759 aatagagttaaaatccactctgtatttaaaacatctgctaccaataattttcaacaacgtcgcagcggaaaataattattctt 126841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 147; Significance: 2e-77; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 121 - 303
Target Start/End: Complemental strand, 21850785 - 21850603
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  21850785 gtaacaccccattttcccaacatataaataatataaaatagatcagagttcatcacaaacagaatatcacatttctttcttcaaaataatatttaacaca 21850686  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| || ||||||||    
T  21850685 aatagagttaaaatccactctttattaaaatcatctgcttccaataattttcaacaacgtcgcaacggaaaatacttattctt 21850603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 121 - 303
Target Start/End: Complemental strand, 3529202 - 3529023
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| || | |||||||||||||||||     
T  3529202 gtaacaccccgtttttccaacatataaataatataaaatagatcagagttcatcacaaacaggatgtcacatttcg-tcctaaaaataatatttaacac- 3529105  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    ||||||||||||||||| |||||||||||||||||| ||  |||||||||||||||| ||||||||| ||| |||||||||||    
T  3529104 aatagagttaaaatccactctttatttaaatcatctactaacaataattttcaacaa-gtcgcagcggaaaataattattctt 3529023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 132 - 269
Target Start/End: Original strand, 25200312 - 25200449
Alignment:
Q  132 ttttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacacaaatagagttaa 231  Q
    |||||||||||||||||||||||||||||  ||||| |||||| |||||||||| |||||||||||||||||||||| |||||||||||| |||||||||    
T  25200312 ttttcccaacatataaataatataaaataattcagagttcatcgcaaacaggatgtcacatttcgttcttcaaaatattatttaacacaattagagttaa 25200411  T
Q  232 aatccaatctttatttaaatcatctgcttccaataatt 269  Q
    |||||| ||||||||||||  | || ||||||||||||    
T  25200412 aatccactctttatttaaagaaactacttccaataatt 25200449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 6001518 - 6001664
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| |||| |||||||||||||||||||||||| |||||| |||||| ||||||| || ||||||||||||||||||||||  ||||||||||    
T  6001518 gtaacaccccgtttttccaacatataaataatataaaataaatcagagttcatcgcaaacagaatgtcacatttcgttcttcaaaatatcatttaacaca 6001617  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||||||||| |||| || | |||||||||| || |||||| ||||||||    
T  6001618 aatagagtt-aaattcactatttatttaaa-caactgctttcaataatt 6001664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 121 - 269
Target Start/End: Complemental strand, 12156045 - 12155898
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| |||||| |||||||||||||||||||| | |||||| |||||||| |||||||| ||||||||||||||| ||||||  ||| ||   |    
T  12156045 gtaacaccccgttttcctaacatataaataatataaaacaaatcagagttcatcac-aacaggatgtcacatttcgttctttaaaatatcattaaatgta 12155947  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    |||||||| |||||| | |||||||||||| || |||||||||||||||    
T  12155946 aatagagtaaaaatcaactctttatttaaagcaactgcttccaataatt 12155898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 29930651 - 29930785
Alignment:
Q  151 atataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacacaaatagagttaaaatccaatctttatttaaa 250  Q
    ||||| ||| ||||||| |||||||||| || ||| ||||||||||||||| |||||||||||||||| |||||||||||||| ||| | ||||||||||    
T  29930651 atatataattgatcagagttcatcacaa-caagatgtcacatttcgttctttaaaataatatttaacataaatagagttaaaa-ccactatttatttaaa 29930748  T
Q  251 tcatctgcttccaataattttcaacaacgtcgcagcg 287  Q
     ||| |||||||||  ||||||||||||||| |||||    
T  29930749 acatttgcttccaaatattttcaacaacgtcacagcg 29930785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 29979805 - 29979939
Alignment:
Q  151 atataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacacaaatagagttaaaatccaatctttatttaaa 250  Q
    ||||| ||| ||||||| |||||||||| || ||| ||||||||||||||| |||||||||||||||| |||||||||||||| ||| | ||||||||||    
T  29979805 atatataattgatcagagttcatcacaa-caagatgtcacatttcgttctttaaaataatatttaacataaatagagttaaaa-ccactatttatttaaa 29979902  T
Q  251 tcatctgcttccaataattttcaacaacgtcgcagcg 287  Q
     ||| |||||||||  ||||||||||||||| |||||    
T  29979903 acatttgcttccaaatattttcaacaacgtcacagcg 29979939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 48629664 - 48629815
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaa---acaggatatcacatttcgttcttcaaaataatatttaac 217  Q
    ||||||| || ||||| ||| ||||||||||||||||||| |||||| ||||||||||   | | ||| |||||||||||||||||||||| |||| ||     
T  48629664 gtaacactccgttttctcaatatataaataatataaaataaatcagagttcatcacaagagagaagatgtcacatttcgttcttcaaaatattattaaat 48629763  T
Q  218 acaaatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
      |||||||||||||||| | | |||||||||| || |||||||||||||||    
T  48629764 gtaaatagagttaaaatcaactttttatttaaagcaactgcttccaataatt 48629815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 269
Target Start/End: Complemental strand, 3162359 - 3162212
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaataga-tcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacac 219  Q
    |||||||||| ||||||| |||||||||||| |||||| | | ||||| |||||||||| |||||| ||||||||||||||||||||||  ||||||       
T  3162359 gtaacaccccgttttccctacatataaataacataaaacaaaatcagagttcatcacaa-caggatgtcacatttcgttcttcaaaatatcatttaatgt 3162261  T
Q  220 aaatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    |||||||||| ||||||| |||||||||||| || |||||| || |||||    
T  3162260 aaatagagtt-aaatccactctttatttaaaacacctgctttcagtaatt 3162212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 148 - 269
Target Start/End: Complemental strand, 12147990 - 12147870
Alignment:
Q  148 ataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacacaaatagagttaaaatccaatctttattt 247  Q
    ||||||||||||| |||||| |||||||||| || ||| ||||||||||||||||||||||  ||| ||   |||||||||||||||| | |||||||||    
T  12147990 ataatataaaataaatcagagttcatcacaa-catgatgtcacatttcgttcttcaaaatatcattaaatgtaaatagagttaaaatcaactctttattt 12147892  T
Q  248 aaatcatctgcttccaataatt 269  Q
    |||  | |||||||||||||||    
T  12147891 aaagaaactgcttccaataatt 12147870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 148 - 269
Target Start/End: Complemental strand, 12152116 - 12151996
Alignment:
Q  148 ataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacacaaatagagttaaaatccaatctttattt 247  Q
    ||||||||||||| |||||| |||||||||| || ||| ||||||||||||||||||||||  ||| ||   |||||||||||||||| | |||||||||    
T  12152116 ataatataaaataaatcagagttcatcacaa-catgatgtcacatttcgttcttcaaaatatcattaaatgtaaatagagttaaaatcaactctttattt 12152018  T
Q  248 aaatcatctgcttccaataatt 269  Q
    |||  | |||||||||||||||    
T  12152017 aaagaaactgcttccaataatt 12151996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 12919365 - 12919288
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgtt 198  Q
    |||||||||| |||||| |||||||||||||||||||||| ||| || || ||| |||||||||| ||||||||||||    
T  12919365 gtaacaccccgttttcctaacatataaataatataaaataaatctgagtttatcgcaaacaggatgtcacatttcgtt 12919288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 250
Target Start/End: Complemental strand, 19165740 - 19165613
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||  |||| |||| ||| ||||||||| ||||| |||||| |||||||||| || ||| |||||||||| |||||||||||  ||| ||   |    
T  19165740 gtaacaccctgtttttccaaaataaaaataatattaaataaatcagagttcatcacaa-caagatgtcacatttcgctcttcaaaatatcattaaaagta 19165642  T
Q  221 aatagagttaaaatccaatctttatttaaa 250  Q
    |||||||||||| |||||||||||||||||    
T  19165641 aatagagttaaa-tccaatctttatttaaa 19165613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 303
Target Start/End: Original strand, 14523533 - 14523596
Alignment:
Q  241 tttatttaaatcatctgcttccaataattttcaa-caacgtcgcagcgaaaattaattattctt 303  Q
    |||| ||||| |||||||||||||||||||||||  |||||||||| | ||| |||||||||||    
T  14523533 tttacttaaaacatctgcttccaataattttcaataaacgtcgcagtggaaaataattattctt 14523596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 12919285 - 12919234
Alignment:
Q  217 cacaaatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    |||||||||||||||| || | | |||||||||||||||||||| ||||||||    
T  12919285 cacaaatagagttaaattc-actatttatttaaatcatctgctttcaataatt 12919234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1716 (Bit Score: 139; Significance: 9e-73; HSPs: 1)
Name: scaffold1716
Description:

Target: scaffold1716; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 121 - 303
Target Start/End: Original strand, 812 - 994
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  812 gtaacaccccgttttcccaacatataaataatataaaatagatcagagttcatcacaaacagaatgtcacattttgttcttcaaaataatatttaacaca 911  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||   ||| |||||||||||    
T  912 aatagagttaaaattcactctttatttaaatcatctgcttccaataattttcaacaacgtcgcagtagaaaataattattctt 994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 4e-72; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 28347048 - 28346867
Alignment:
Q  122 taacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacacaa 221  Q
    ||||||| | |||||||||||||||||||||||||||||||| ||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  28347048 taacacctcgttttcccaacatataaataatataaaatagattagagttcatcccaaacaggatgtcacatttcgttcttcaaaataatatttaacacaa 28346949  T
Q  222 atagagttaaaatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    |||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  28346948 atagagttaaaatccactctttatttaaaacatctggttccaataattttcaacaacgtcgcagcggaaaataattattctt 28346867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 121 - 303
Target Start/End: Complemental strand, 19197483 - 19197295
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaata-----gatcagaattcatcacaaacaggatatcacatttcgttcttc-aaaataatattt 214  Q
    ||||||||||||||||||||||||||||||||||||||||     ||||||| ||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  19197483 gtaacaccccattttcccaacatataaataatataaaatataatagatcagagttcatcacaaacaggatgtcacattttgttcttccaaaataatattt 19197384  T
Q  215 aacacaaatagagttaaaatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||    
T  19197383 aacacaaatagagttaaaatccacaatttatttaaatcatctgcttccaataattttcaacaacatcgcagcggaaaataattattctt 19197295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 132 - 287
Target Start/End: Complemental strand, 36737852 - 36737699
Alignment:
Q  132 ttttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacacaaatagagttaa 231  Q
    |||||||||||||||||| |||||||||| |||||| |||||  |||||||||| |||||||||||||||| |||||||||||||||||||||||||| |    
T  36737852 ttttcccaacatataaatgatataaaataaatcagagttcattgcaaacaggatttcacatttcgttcttcgaaataatatttaacacaaatagagtt-a 36737754  T
Q  232 aatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcg 287  Q
    ||| || | |||||||||| || ||||||||||||| ||  |||||||||||||||    
T  36737753 aattcactatttatttaaagcaactgcttccaataa-ttaaaacaacgtcgcagcg 36737699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 121 - 287
Target Start/End: Complemental strand, 36733709 - 36733545
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| |||| ||||||||||||  |||||||||| |||||| |||||  |||||| ||| ||||||||||||||||||||||||||||||||||    
T  36733709 gtaacaccccgtttttccaacatataaaagatataaaataaatcagagttcattgcaaacatgatgtcacatttcgttcttcaaaataatatttaacaca 36733610  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcg 287  Q
    ||||||||| |||| || | |||||||||| || ||||||||||||| ||  |||||||||||||||    
T  36733609 aatagagtt-aaattcactatttatttaaagcaactgcttccaataa-ttaaaacaacgtcgcagcg 36733545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 19818668 - 19818779
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||||| |||||| |||||||||| |||||||||||| |||||||||  ||||||||||    
T  19818668 gtaacaccccgttttctcaacatataaataatataaaataaatcagagttcatcgcaaacaggatgtcacatttcgttattcaaaatatcatttaacaca 19818767  T
Q  221 aatagagttaaa 232  Q
    ||||||||||||    
T  19818768 aatagagttaaa 19818779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 30213180 - 30213069
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| |||||| |||| ||||| ||||||||||| ||||||||||  ||||||||||    
T  30213180 gtaacaccccgttttcccaacatataaataatataaaataaatcagagttcatcgcaaataggatgtcacatttcgtccttcaaaatatcatttaacaca 30213081  T
Q  221 aatagagttaaa 232  Q
    ||||||||||||    
T  30213080 aatagagttaaa 30213069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 45526892 - 45527037
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||| | ||||||||||||| ||||||||| ||||| |||||| |||||||| |||||||| ||| ||||||||||||||||||  ||| ||   |    
T  45526892 gtaacacctcgttttcccaacataaaaataatattaaataaatcagagttcatcac-aacaggatgtcaaatttcgttcttcaaaatatcattaaatgta 45526990  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||||||||| ||||||| |||||||||||| || |||||| ||||||||    
T  45526991 aatagagtt-aaatccactctttatttaaa-caactgctttcaataatt 45527037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 45535363 - 45535508
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| ||||||||||||| ||||||||  ||||| |||| | |||||||| || ||||| |||||||||||||||||||||| |||| ||   |    
T  45535363 gtaacaccccgttttcccaacataaaaataatactaaataaatcaaagttcatcac-aataggatgtcacatttcgttcttcaaaatattattaaatgta 45535461  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||||||||| ||||||  |||||||||||| || |||||| ||||||||    
T  45535462 aatagagtt-aaatccgctctttatttaaa-caactgctttcaataatt 45535508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 208
Target Start/End: Original strand, 19644048 - 19644133
Alignment:
Q  122 taacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaata 208  Q
    ||||||||  |||||||||| || ||||||||| ||||| |||||| || ||||||| |||||| |||||||||| |||||||||||    
T  19644048 taacaccctgttttcccaacgtaaaaataatattaaataaatcagagtttatcacaa-caggatgtcacatttcgctcttcaaaata 19644133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 303
Target Start/End: Complemental strand, 14181385 - 14181206
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaatt-catcacaaacaggatatcacatttcgttcttcaaaa-taatatttaaca 218  Q
    |||||||| | |||||||||||| ||||||||  |||||| || ||| || || ||||| |||||| ||||||| | |||||||||| ||| |||||| |    
T  14181385 gtaacacctcgttttcccaacatgtaaataatgcaaaata-attagagtttcaccacaa-caggatgtcacatt-ctttcttcaaaaataacatttaata 14181289  T
Q  219 caaatagagttaaaatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    ||| |||||||||||  || | |||||| ||| ||||||||| ||||||  |||||||||||||||||| ||| || ||||||||    
T  14181288 caa-tagagttaaaaatcactatttattaaaa-catctgctttcaataaacttcaacaacgtcgcagcggaaaatatttattctt 14181206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 6e-71; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 121 - 303
Target Start/End: Original strand, 34391210 - 34391393
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||  ||||||||||||||||||||||||||||| |||||| |||||| |||||||||| ||||||||| ||||||||||||||||||||||||    
T  34391210 gtaacaccctgttttcccaacatataaataatataaaataaatcagagttcatcgcaaacaggatgtcacatttctttcttcaaaataatatttaacaca 34391309  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaat-aattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||    
T  34391310 aatagagttaaaatccactctttatttaaatcatctgcttccaataaattttcaacaacgtcgcagcggaaaataattattctt 34391393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 121 - 287
Target Start/End: Original strand, 35892700 - 35892866
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||  ||||||||||||||||||||||||||||| |||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||| |    
T  35892700 gtaacaccctgttttcccaacatataaataatataaaataaatcagagttcatcgcaaacaggatgtcacatttcgttcttcaaaatattatttaacata 35892799  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcg 287  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35892800 aatagagttaaaatccactctttatttaaaacatctgcttccaataattttcaacaacgtcgcagcg 35892866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 135 - 232
Target Start/End: Complemental strand, 20709788 - 20709691
Alignment:
Q  135 tcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacacaaatagagttaaa 232  Q
    |||||||||||||||||||||||||| |||||||||||||||||| | ||| |||||||| |||||||||||||  ||||||||||||||||||||||    
T  20709788 tcccaacatataaataatataaaataaatcagaattcatcacaaataagatgtcacattttgttcttcaaaatatcatttaacacaaatagagttaaa 20709691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 28452763 - 28452911
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaa--ttcatcacaaacaggatatcacatttcgttcttcaaaataatatttaaca 218  Q
    |||||||||| ||||| ||||||||||||||||||||||| ||||||   |||||  |||||||||| ||||||||||||||||||||||  ||||||||    
T  28452763 gtaacaccccgttttctcaacatataaataatataaaataaatcagagagttcattgcaaacaggatgtcacatttcgttcttcaaaatatcatttaaca 28452862  T
Q  219 caaatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||||||||||| |||| || | |||||||||| || |||||| ||||||||    
T  28452863 caaatagagtt-aaattcactatttatttaaa-caactgctttcaataatt 28452911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 250
Target Start/End: Complemental strand, 21191135 - 21191007
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaat-agatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacac 219  Q
    |||||||||| |||||||||||||||||||| ||||||| | |||||| |||||||| |||||||||||||||||||||||||||||||  ||||||       
T  21191135 gtaacaccccgttttcccaacatataaataacataaaataaaatcagagttcatcac-aacaggatatcacatttcgttcttcaaaatatcatttaatgt 21191037  T
Q  220 aaatagagttaaaatccaatctttatttaaa 250  Q
    |||| ||||| ||||||| ||||||||||||    
T  21191036 aaattgagtt-aaatccactctttatttaaa 21191007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 303
Target Start/End: Complemental strand, 21351115 - 21351073
Alignment:
Q  261 ccaataattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    |||||||||||||||||||||||||||||||  ||||||||||    
T  21351115 ccaataattttcaacaacgtcgcagcgaaaaacaattattctt 21351073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 135; Significance: 2e-70; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 121 - 303
Target Start/End: Original strand, 1817304 - 1817486
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    ||||||| || ||||||||| ||||||||||||||||||| |||||| || ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  1817304 gtaacactccgttttcccaaaatataaataatataaaataaatcagagttaatcgcaaacaggatgtcacatttcgttcttcaaaataatatttaacaca 1817403  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||    
T  1817404 aatagagttaaaatccactctttatttaaatcatctgcttccaataattttcaacaacgtcgcaacggaaaataattattctt 1817486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 121 - 303
Target Start/End: Complemental strand, 30675155 - 30674973
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| |||||| |||||| ||| ||||||||||||||||||||||||||||||||||    
T  30675155 gtaacaccccattttcccaacatataattaatataaaataaatcagagttcatcgcaaacaagatgtcacatttcgttcttcaaaataatatttaacaca 30675056  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||| ||| |||||||||||    
T  30675055 aatagagttaaaatccactctttatttaaaacatctgcttccaataattttcagcaatgtcgcagcggaaaataattattctt 30674973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 121 - 303
Target Start/End: Original strand, 29043491 - 29043673
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| || ||||||||| ||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29043491 gtaacaccccgttatcccaacatgtaaataatataaaatagatcagagtttatcacaaacaggatgtcacatttcgttcttcaaaataatatttaacaca 29043590  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    |||| |||||||||||| |||||||||||| ||||| |||||||||||||| ||||||||||||||| ||| || ||||||||    
T  29043591 aatacagttaaaatccactctttatttaaaacatctacttccaataatttttaacaacgtcgcagcggaaaatatttattctt 29043673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 10444345 - 10444493
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||| ||||| ||||||||||||||||||| ||||||||||||||    
T  10444345 gtaacacccctttttcccaacatataaataatataaaatagatcagagttcatcgcaaagaggatgtcacatttcgttcttcaaattaatatttaacaca 10444444  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    |||| ||||||||| || ||| |||||||| || |||||||||||||||    
T  10444445 aataaagttaaaattcactctatatttaaagcaactgcttccaataatt 10444493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 35055505 - 35055616
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| ||||||||||||||||||||||||||||| |||| | |||||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  35055505 gtaacaccccgttttcccaacatataaataatataaaataaatcatagttcattgcaaacaggatgtcacatttcgttcttcaaaataatatttaacaca 35055604  T
Q  221 aatagagttaaa 232  Q
    ||||||||||||    
T  35055605 aatagagttaaa 35055616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 133 - 269
Target Start/End: Complemental strand, 31347618 - 31347482
Alignment:
Q  133 tttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacacaaatagagttaaa 232  Q
    |||||||||||||||||||||||||||| |||||| |||| | |||||||||| ||||||||||||||||||||||  ||| ||   |||||||||||||    
T  31347618 tttcccaacatataaataatataaaataaatcagagttcaccgcaaacaggatgtcacatttcgttcttcaaaatatcattaaatgtaaatagagttaaa 31347519  T
Q  233 atccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||||| |||||||||||| ||||||||| ||||||||    
T  31347518 atccactctttatttaaaacatctgctttcaataatt 31347482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 121 - 269
Target Start/End: Complemental strand, 3008659 - 3008513
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||  |||||| || ||||||||||||||||||| |||||| |||||  |||||||||||||||||||||||||||||||||  ||||||||||    
T  3008659 gtaacaccctgttttcctaatatataaataatataaaataaatcagagttcattgcaaacaggatatcacatttcgttcttcaaaatatcatttaacaca 3008560  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||||||||| |||| || | |||||||||| || |||||| ||||||||    
T  3008559 aatagagtt-aaattcactatttatttaaa-caactgctttcaataatt 3008513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 18451260 - 18451406
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||  ||||||||||||||||||||||||||||| || ||| |||||| |||||||||| ||||||||||||||||||||||  ||| ||||||    
T  18451260 gtaacaccctgttttcccaacatataaataatataaaataaattagagttcatcgcaaacaggatgtcacatttcgttcttcaaaatatcattcaacaca 18451359  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||||||||| |||| || | |||||||||| || |||||| ||||||||    
T  18451360 aatagagtt-aaattcactatttatttaaa-caactgctttcaataatt 18451406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 13803563 - 13803452
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    ||||||| || ||||||||||||||||||||||||||||| || ||| ||||||  ||||||||| ||||||||| ||||||||||||  ||||||||||    
T  13803563 gtaacactccgttttcccaacatataaataatataaaataaattagagttcatcttaaacaggatgtcacatttcattcttcaaaatatcatttaacaca 13803464  T
Q  221 aatagagttaaa 232  Q
    |||| |||||||    
T  13803463 aataaagttaaa 13803452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 17736245 - 17736356
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||||| || ||| ||||  |||  ||||||||||||||||||||||  ||||||||||    
T  17736245 gtaataccccgttttcccaacatataaataatataaaataaatcagagtttatcgcaaattggacgtcacatttcgttcttcaaaatatcatttaacaca 17736344  T
Q  221 aatagagttaaa 232  Q
    ||||||||||||    
T  17736345 aatagagttaaa 17736356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 24507096 - 24507009
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaata 208  Q
    |||||||| |||||| |||||||||||||||||| ||||| |||||| |||||| |||||||||| ||||||||||||||||||||||    
T  24507096 gtaacaccacatttttccaacatataaataatattaaataaatcagagttcatcgcaaacaggatgtcacatttcgttcttcaaaata 24507009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 303
Target Start/End: Original strand, 18400512 - 18400575
Alignment:
Q  241 tttatttaaatcatctgcttccaataattttcaa-caacgtcgcagcgaaaattaattattctt 303  Q
    |||||||||| ||| |||||||||||||||||||  |||||||||||| ||| |||||||||||    
T  18400512 tttatttaaaacatttgcttccaataattttcaataaacgtcgcagcggaaaataattattctt 18400575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 120; Significance: 2e-61; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 121 - 284
Target Start/End: Original strand, 30609468 - 30609631
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||  |||| |||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30609468 gtaacaccctgtttttccaatatataaataatataaaaaagatcagagttcatcacaaacaggatgtcacatttcgttcttcaaaataatatttaacaca 30609567  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgca 284  Q
    ||||||||||||||||| |||||||||||||||||||||  ||| |||||||||||||||||||    
T  30609568 aatagagttaaaatccactctttatttaaatcatctgctaacaacaattttcaacaacgtcgca 30609631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 21402918 - 21403064
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| || |||||||||||||| ||||||||||||| ||||||||  ||||||||||    
T  21402918 gtaacaccccgttttcccaacatataaataatataaaataaatcagagttaatcacaaacaggatgtcacatttcgttcgtcaaaatatcatttaacaca 21403017  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||||||||| |||| || | ||||||||||| || ||||| ||||||||    
T  21403018 aatagagtt-aaattcactatttatttaaataat-tgctttcaataatt 21403064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 21401528 - 21401674
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||| | ||||| ||||||||||||||||||||||| |||||| |||||| |||||||||| |||||||||||||||||| |||  ||||||||||    
T  21401528 gtaacacctcgttttcacaacatataaataatataaaataaatcagagttcatcgcaaacaggatgtcacatttcgttcttcaagatataatttaacaca 21401627  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||||||||| |||| || | ||||||||||| || ||||| ||||||||    
T  21401628 aatagagtt-aaattcactatttatttaaataat-tgctttcaataatt 21401674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 136 - 269
Target Start/End: Complemental strand, 23295517 - 23295386
Alignment:
Q  136 cccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacacaaatagagttaaaatc 235  Q
    ||||||||||||||||| ||||||| |||||| |||||| ||||||| || || ||||||||||||||||||| ||||||||||||||| |||| ||||     
T  23295517 cccaacatataaataatgtaaaataaatcagagttcatcgcaaacagaatgtcgcatttcgttcttcaaaatattatttaacacaaataaagtt-aaatt 23295419  T
Q  236 caatctttatttaaatcatctgcttccaataatt 269  Q
    || | |||||||||| || |||||| ||||||||    
T  23295418 cactatttatttaaa-caactgctttcaataatt 23295386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 20311849 - 20311932
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaa 205  Q
    |||||||||| |||||||||||||||||||||| |||||| || ||| | |||  |||||||||| |||||||||||||||||||    
T  20311849 gtaacaccccgttttcccaacatataaataatacaaaata-ataagagtgcattgcaaacaggatgtcacatttcgttcttcaaa 20311932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 167
Target Start/End: Complemental strand, 21402747 - 21402701
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcaga 167  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  21402747 gtaacaccccgttttcccaacatataaataatataaaatagatcaga 21402701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 5e-59; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 121 - 303
Target Start/End: Complemental strand, 22618406 - 22618223
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttc-gttcttcaaaataatatttaacac 219  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||| |||||| |||||||||| |||||||   ||| |||||||||  |||||||||    
T  22618406 gtaacaccccgttttcccaacatataaataatataaattagatcagagttcatcgcaaacaggatgtcacattaatgtttttcaaaatatcatttaacac 22618307  T
Q  220 aaatagagttaaaatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||    
T  22618306 aaatagagttaaaatccactctttatctaaatcatctgcttccaataattttcaacaacgtcgcagcggaaaatatttattctt 22618223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 121 - 287
Target Start/End: Original strand, 23884835 - 23884999
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| |||||| |||||||||||||||||||||| |||||| |||||  ||||||| || |||||||||||||||||||||||||||||||| |    
T  23884835 gtaacaccccgttttcctaacatataaataatataaaataaatcagagttcattgcaaacag-atgtcacatttcgttcttcaaaataatatttaacata 23884933  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcg 287  Q
    |||||||||||| || | | ||||||||||||||||| |||||||||||||||||||||||||||||    
T  23884934 aatagagttaaattc-actatttatttaaatcatctgtttccaataattttcaacaacgtcgcagcg 23884999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 20518973 - 20518859
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| |||||| |||||||||| |||||||| |||||||||||||  ||||||||||    
T  20518973 gtaacaccccgttttcccaacatataaataatataaaataaatcagagttcatcgcaaacaggatgtcacatttagttcttcaaaatatcatttaacaca 20518874  T
Q  221 aatagagttaaaatc 235  Q
    ||||||||| |||||    
T  20518873 aatagagtttaaatc 20518859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 121 - 269
Target Start/End: Complemental strand, 22709756 - 22709610
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| |||||| |||||||||||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||||||  || |||||||    
T  22709756 gtaacaccccgttttccgaacatataaataatataaaataaatcagagttcatcgcaaacaggatgtcacatttcgttcttcaaaatatcatataacaca 22709657  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||| ||||| |||| || |||||||||||| || |||||| ||||||||    
T  22709656 aattgagtt-aaattcactctttatttaaa-caactgctttcaataatt 22709610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 132 - 269
Target Start/End: Original strand, 38049692 - 38049828
Alignment:
Q  132 ttttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacacaaatagagttaa 231  Q
    |||||||||||| |||||||||||||||| |||||| |||||||||| |||||| |||||||||||||||||||||| |||| ||   ||||||||||||    
T  38049692 ttttcccaacatttaaataatataaaataaatcagagttcatcacaa-caggatgtcacatttcgttcttcaaaatattattaaatgtaaatagagttaa 38049790  T
Q  232 aatccaatctttatttaaatcatctgcttccaataatt 269  Q
    |||||| |||| ||||||| || || |||||| |||||    
T  38049791 aatccactcttaatttaaagcaacttcttccagtaatt 38049828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 121 - 269
Target Start/End: Complemental strand, 7464527 - 7464380
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| ||||||||||| ||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||||||||||  ||| ||   |    
T  7464527 gtaacaccccgttttcccaacacataaataatataaaataaatcagagttcatcac-aacaggatgtcacatttcgttcttcaaaatatcattaaatgta 7464429  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||||||||||||||| | ||| |||| |||  | || ||||||||||||    
T  7464428 aatagagttaaaatcaactctctattaaaagtaacttcttccaataatt 7464380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 20877959 - 20878106
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    ||||||||||  ||||||||||| |||||||||||||||| |||||| |||||||| |||||||| |||||||| |||||||||||||  ||| ||   |    
T  20877959 gtaacaccccgatttcccaacatgtaaataatataaaataaatcagagttcatcac-aacaggatgtcacatttagttcttcaaaatatcattaaatgta 20878057  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    |||||||||||||||    ||||||||||| || |||||||||||||||    
T  20878058 aatagagttaaaatcagccctttatttaaagcaactgcttccaataatt 20878106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 21678087 - 21678015
Alignment:
Q  132 ttttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaa 205  Q
    ||||||||||||||||||||||||||||| |||||| | |||| |||| ||||| |||||||||||||||||||    
T  21678087 ttttcccaacatataaataatataaaata-atcagagtgcatcgcaaataggatgtcacatttcgttcttcaaa 21678015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 21684470 - 21684387
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaa 205  Q
    |||||||||  ||||||||| |||||||||||| |||||| |||||| | |||| |||||||||| |||||||||||||||||||    
T  21684470 gtaacaccctgttttcccaatatataaataatacaaaata-atcagagtgcatcgcaaacaggatgtcacatttcgttcttcaaa 21684387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 21688819 - 21688736
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaa 205  Q
    |||||||||  ||||||||| |||||||||||| |||||| |||||| | |||| |||||||||| |||||||||||||||||||    
T  21688819 gtaacaccctgttttcccaatatataaataatacaaaata-atcagagtgcatcgcaaacaggatgtcacatttcgttcttcaaa 21688736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 303
Target Start/End: Complemental strand, 36407136 - 36407073
Alignment:
Q  241 tttatttaaatcatctgcttccaataattttc-aacaacgtcgcagcgaaaattaattattctt 303  Q
    |||||||||| |||||||| |||||||||||| || |||||||||||| ||| |||||||||||    
T  36407136 tttatttaaaacatctgctgccaataattttcaaaaaacgtcgcagcggaaaataattattctt 36407073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 303
Target Start/End: Complemental strand, 36734387 - 36734324
Alignment:
Q  241 tttatttaaatcatctgcttccaataattttcaa-caacgtcgcagcgaaaattaattattctt 303  Q
    |||||||||| |||||||||||||||||||||||  |||||||||||  ||| |||||||||||    
T  36734387 tttatttaaaacatctgcttccaataattttcaataaacgtcgcagccgaaaataattattctt 36734324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 274
Target Start/End: Original strand, 22472906 - 22472939
Alignment:
Q  241 tttatttaaatcatctgcttccaataattttcaa 274  Q
    |||||||||| |||||||||||||||||||||||    
T  22472906 tttatttaaaacatctgcttccaataattttcaa 22472939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 80; Significance: 2e-37; HSPs: 3)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 3338 - 3227
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| |||||| |||||||||| ||||||||| ||||||||||||  ||||||||||    
T  3338 gtaacaccccgttttcccaacatataaataatataaaataaatcagagttcatcgcaaacaggatgtcacatttcattcttcaaaatatcatttaacaca 3239  T
Q  221 aatagagttaaa 232  Q
    ||||||||||||    
T  3238 aatagagttaaa 3227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 44340 - 44229
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| ||||||||||||||||||||||| ||||| |||||| |||||| |||||||||| ||||||||||||||||||||||  ||||||||||    
T  44340 gtaacaccccgttttcccaacatataaataatatgaaataaatcagagttcatcgcaaacaggatgtcacatttcgttcttcaaaatatcatttaacaca 44241  T
Q  221 aatagagttaaa 232  Q
    ||||||||||||    
T  44240 aatagagttaaa 44229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 121 - 269
Target Start/End: Complemental strand, 7957 - 7811
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| |||||  |||||||||| |||||||| ||||||||||| |  ||||||||||    
T  7957 gtaacaccccgttttcccaacatataaataatataaaataaatcagagttcattgcaaacaggatgtcacattttgttcttcaaaacatcatttaacaca 7858  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||||||||| |||| || | |||||||||| || |||||| ||||||||    
T  7857 aatagagtt-aaattcactatttatttaaa-caactgctttcaataatt 7811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 2e-37; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 10282339 - 10282450
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| ||||||||||||||||||||||||||||  |||||| |||||   ||||||||| ||||||||||||||||||||||||||||||||||    
T  10282339 gtaacaccccgttttcccaacatataaataatataaaattaatcagagttcattggaaacaggatgtcacatttcgttcttcaaaataatatttaacaca 10282438  T
Q  221 aatagagttaaa 232  Q
    ||||||||||||    
T  10282439 aatagagttaaa 10282450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 14355074 - 14354963
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| ||||||||||||||||||||||||||||| || ||| |||||| |||||||||| ||||||||||||||||||||||  ||||||||||    
T  14355074 gtaacaccccgttttcccaacatataaataatataaaataaattagagttcatcgcaaacaggatgtcacatttcgttcttcaaaatatcatttaacaca 14354975  T
Q  221 aatagagttaaa 232  Q
    ||||||||||||    
T  14354974 aatagagttaaa 14354963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 9620805 - 9620951
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| |||||||||||||||| ||||| |||||| |||||| | ||||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  9620805 gtaacaccccgttttcccaacatataactaatacaaaataaatcagagtccatcacaaacaggatgtcacatttacttcttcaaaataatatttaacaca 9620904  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||||||||| |||| || | |||||||||| || |||||| ||||||||    
T  9620905 aatagagtt-aaattcactatttatttaaa-caactgctttcaataatt 9620951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 10271617 - 10271728
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| |||||||||||||||||||||| |||||  |||||| |||||   ||| ||||| ||||||||||||||||||||||||||||||||||    
T  10271617 gtaacaccccgttttcccaacatataaataatacaaaattaatcagagttcattggaaataggatgtcacatttcgttcttcaaaataatatttaacaca 10271716  T
Q  221 aatagagttaaa 232  Q
    ||||||||||||    
T  10271717 aatagagttaaa 10271728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 121 - 287
Target Start/End: Original strand, 14475895 - 14476060
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| ||||||||||||||||||||||||||||| | |||||| | |||| |||||||| ||||||||||||||||||||||  ||| ||   |    
T  14475895 gtaacaccccgttttcccaacatataaataatataaaataaaccagaatccttcac-aacaggatgtcacatttcgttcttcaaaatatcattaaatgta 14475993  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcg 287  Q
    |||| |||||||||||| |||| ||| |||  | | |||| |||||||||  || || |||||||||    
T  14475994 aatatagttaaaatccactcttcattaaaaagaaccgctttcaataatttcaaataatgtcgcagcg 14476060  T

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Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 303
Target Start/End: Complemental strand, 19567750 - 19567687
Alignment:
Q  241 tttatttaaatcatctgcttccaataattttc-aacaacgtcgcagcgaaaattaattattctt 303  Q
    |||||||||| ||||||||||||||||||||| |  |||||||||||| ||| |||||||||||    
T  19567750 tttatttaaaacatctgcttccaataattttcgataaacgtcgcagcggaaaataattattctt 19567687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 160
Target Start/End: Original strand, 12621513 - 12621552
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaata 160  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  12621513 gtaacaccccgttttcccaacttataaataatataaaata 12621552  T

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Target: scaffold0148 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 7326 - 7474
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| |||||| |||||| ||| |||||||   |||||||||||| ||| |||||||    
T  7326 gtaacaccccgttttcccaacatataaataatataaaataaatcagagttcatcgcaaacaagatgtcacattcaattcttcaaaatattatataacaca 7425  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||||||||||||||||| || |||| |||| || || ||||||| ||||    
T  7426 aatagagttaaaatccactccttatctaaaacaactacttccaacaatt 7474  T

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Target: scaffold0035 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 27155 - 27302
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||||| |||||||||||||||| |||||||||||| |||||| |||||||| |||||||| ||||||||||||||||||||||  ||| ||   |    
T  27155 gtaacaccccgttttcccaacatataattaatataaaataaatcagagttcatcac-aacaggatgtcacatttcgttcttcaaaatatcattaaatgta 27253  T
Q  221 aatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||||||||||||||  | |||||||| ||| || |||||||||||||||    
T  27254 aatagagttaaaataaactctttattaaaagcaactgcttccaataatt 27302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 40771 - 40685
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaata 208  Q
    |||||||||| |||||||||||||||||||||| |||||| |||||| | |||| |||||||||| || |||||||||||||||||||    
T  40771 gtaacaccccgttttcccaacatataaataatacaaaata-atcagagtgcatcgcaaacaggatgtcgcatttcgttcttcaaaata 40685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 45338 - 45264
Alignment:
Q  133 tttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaata 208  Q
    ||||||||||||||||||||| |||||| | |||| | ||||| ||||||||| || |||||| ||||||||||||    
T  45338 tttcccaacatataaataatacaaaata-agcagagtgcatcataaacaggatgtcgcatttcattcttcaaaata 45264  T

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Target: scaffold0117 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 22545 - 22692
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacaca 220  Q
    |||||||| ||  ||||||||||||||||||||||||||| |||||| |||||| ||| |||||| ||||||||||||||||||||||  ||||||||||    
T  22545 gtaacacctcaaattcccaacatataaataatataaaataaatcagagttcatcgcaaccaggatgtcacatttcgttcttcaaaatatcatttaacaca 22644  T
Q  221 aatagagttaaaatc-caatctttatttaaatcatctgcttccaataatt 269  Q
    ||| |||||||| || | || |||||||||| || |||||| ||||||||    
T  22645 aat-gagttaaattcactatatttatttaaa-caactgctttcaataatt 22692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 122 - 269
Target Start/End: Original strand, 27095 - 27241
Alignment:
Q  122 taacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacacaa 221  Q
    ||||||||| ||||||||||||||||||||||||||||| | || ||||||||||  |||  || ||||||||||||||||||||||  ||| ||   ||    
T  27095 taacaccccgttttcccaacatataaataatataaaataaaccaaaattcatcac-gacaaaatgtcacatttcgttcttcaaaatatcattaaatgtaa 27193  T
Q  222 atagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    ||||||  |||||||| |||||||||||| || |||||||||||||||    
T  27194 atagaggaaaaatccactctttatttaaagcaactgcttccaataatt 27241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 2277 - 2364
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgttcttcaaaata 208  Q
    |||||||| |||||| |||||||||||||||||| ||||| |||||| |||||| |||||||||| ||||||||||||||||||||||    
T  2277 gtaacaccacatttttccaacatataaataatattaaataaatcagagttcatcgcaaacaggatgtcacatttcgttcttcaaaata 2364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 269
Target Start/End: Complemental strand, 39456 - 39309
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaat-agatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacac 219  Q
    |||||||||| ||||||||||||||||| || ||||||| | |||||| || | ||| |||||||| ||||||||||||||||||||||  |||| |       
T  39456 gtaacaccccgttttcccaacatataaacaacataaaataaaatcagagtttaacac-aacaggatgtcacatttcgttcttcaaaatatcatttgatgt 39358  T
Q  220 aaatagagttaaaatccaatctttatttaaatcatctgcttccaataatt 269  Q
    |||||||||| ||||||| |||||||||||| || |||||| || |||||    
T  39357 aaatagagtt-aaatccactctttatttaaaacaactgctttcagtaatt 39309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 83729 - 83658
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatt 193  Q
    |||||||||| ||||||||| ||||||| ||||||||||| |||||| |||||||| ||||||||||||||||    
T  83729 gtaacaccccgttttcccaatatataaaaaatataaaataaatcagagttcatcac-aacaggatatcacatt 83658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 72511 - 72428
Alignment:
Q  220 aaatagagttaaaatccaatctttatttaaatcatctgcttccaataattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    |||| ||||||||||||| |||||||||||| ||||| |||||||||||||| |||||| |||||| | ||| || ||||||||    
T  72511 aaattgagttaaaatccactctttatttaaaacatctacttccaataatttttaacaacttcgcagtggaaaatatttattctt 72428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 250
Target Start/End: Original strand, 22072 - 22200
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaat-agatcagaattcatcacaaacaggatatcacatttcgttcttcaaaataatatttaacac 219  Q
    |||||||||| |||||||||||||||||||| ||||||| | ||||||  ||| ||| |||||||| ||||||||||||||||  ||||  ||||||       
T  22072 gtaacaccccgttttcccaacatataaataacataaaataaaatcagagatcaacac-aacaggatgtcacatttcgttcttcggaatatcatttaatct 22170  T
Q  220 aaatagagttaaaatccaatctttatttaaa 250  Q
    |||||||||| ||||||| ||||| ||||||    
T  22171 aaatagagtt-aaatccactctttgtttaaa 22200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 1052 - 1138
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcg-ttcttcaaaat 207  Q
    ||||||| || ||||||||||||||||| ||||| ||||| |||||| |||||||| |||||||| |||||||| | |||||||||||    
T  1052 gtaacacgccgttttcccaacatataaagaatattaaataaatcagagttcatcac-aacaggatgtcacattttgtttcttcaaaat 1138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 9081 - 9006
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaatagatcagaattcatcacaaacaggatatcacatttcgtt 198  Q
    ||||||| || ||||| |||||||||||||||| |||||| |||||| |||||||| |||| ||| ||||||||||||    
T  9081 gtaacactccgttttctcaacatataaataatacaaaata-atcagagttcatcac-aacatgatgtcacatttcgtt 9006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 10831 - 10790
Alignment:
Q  262 caataattttcaacaacgtcgcagcgaaaattaattattctt 303  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  10831 caataattttcaacaacgtcgcagcggaaaataattattctt 10790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 61414 - 61327
Alignment:
Q  121 gtaacaccccattttcccaacatataaataatataaaataga-tcagaattcatcacaaacaggatatcacatttcgttcttcaaaata 208  Q
    ||||||| || |||| ||||||||||||||| ||||| || | ||||| |||||| |||  ||||||| ||||||||||||||||||||    
T  61414 gtaacacaccttttttccaacatataaataacataaagtaaaatcagagttcatcgcaat-aggatataacatttcgttcttcaaaata 61327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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