View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4445-Insertion-18 (Length: 205)
Name: NF4445-Insertion-18
Description: NF4445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4445-Insertion-18 |
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Alignment Details
Target: chr3 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 8 - 187
Target Start/End: Complemental strand, 45666001 - 45665822
Alignment:
| Q |
8 |
gttgtcactttaggattaaaggcaaacctagactaccttaagaaactttccaagggccgatttgatcacatctttttaatttatccatccccgttcaaaa |
107 |
Q |
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| T |
45666001 |
gttgtcactttaggataaaaggcaaacctagactaccttaagaaactttccaagggccgatttgatcacatctttttaatttatccatccccgttcaaaa |
45665902 |
T |
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| Q |
108 |
catcagttttcgacccttaaaattaaaacatcaattttccaattaagcttattctctaattataatttctcattttgggt |
187 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45665901 |
catcagttttccacccttaaaattaaaacatcaattttccaattaagcttattctctaattataatttctcattttgggt |
45665822 |
T |
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