View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4445-Insertion-21 (Length: 101)
Name: NF4445-Insertion-21
Description: NF4445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4445-Insertion-21 |
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| [»] chr6 (2 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 43; Significance: 5e-16; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 21675635 - 21675589
Alignment:
| Q |
55 |
ggaaaaaaccatacacttgaactcctttttgctgaagtcaatcatta |
101 |
Q |
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| T |
21675635 |
ggaaaaaaccatacacttgaactcctttttgctgaagtcaatgatta |
21675589 |
T |
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Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 21634669 - 21634624
Alignment:
| Q |
56 |
gaaaaaaccatacacttgaactcctttttgctgaagtcaatcatta |
101 |
Q |
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||||||||||||||||| |||||||||||||||||| |||| |||| |
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| T |
21634669 |
gaaaaaaccatacacttaaactcctttttgctgaagccaatgatta |
21634624 |
T |
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