View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4445-Insertion-7 (Length: 589)

Name: NF4445-Insertion-7
Description: NF4445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4445-Insertion-7
NF4445-Insertion-7
[»] chr2 (34 HSPs)
chr2 (8-233)||(12603371-12603594)
chr2 (398-589)||(4505888-4506079)
chr2 (211-377)||(12603185-12603355)
chr2 (405-589)||(6965001-6965183)
chr2 (399-589)||(3155211-3155401)
chr2 (399-589)||(12337365-12337556)
chr2 (410-589)||(8907007-8907187)
chr2 (394-589)||(29939776-29939970)
chr2 (405-557)||(40636164-40636315)
chr2 (399-589)||(3953000-3953188)
chr2 (405-567)||(34693991-34694152)
chr2 (405-567)||(34716403-34716564)
chr2 (399-589)||(26716122-26716313)
chr2 (395-586)||(24410434-24410627)
chr2 (413-589)||(10762499-10762673)
chr2 (397-589)||(27506657-27506848)
chr2 (398-585)||(7162782-7162968)
chr2 (413-589)||(9046023-9046199)
chr2 (398-557)||(5952635-5952791)
chr2 (411-512)||(1396629-1396730)
chr2 (480-583)||(16097008-16097111)
chr2 (480-581)||(24035544-24035645)
chr2 (480-566)||(13800543-13800630)
chr2 (480-583)||(21665699-21665802)
chr2 (480-583)||(28425709-28425812)
chr2 (482-583)||(38400798-38400899)
chr2 (415-520)||(8327681-8327785)
chr2 (480-572)||(12134039-12134131)
chr2 (481-566)||(16227368-16227453)
chr2 (480-521)||(22727456-22727497)
chr2 (480-523)||(7742132-7742176)
chr2 (481-520)||(42029208-42029247)
chr2 (488-524)||(10252475-10252511)
chr2 (481-517)||(11952588-11952624)
[»] chr6 (23 HSPs)
chr6 (399-589)||(13727317-13727507)
chr6 (398-589)||(21280543-21280734)
chr6 (399-589)||(21479492-21479683)
chr6 (397-589)||(27788606-27788796)
chr6 (411-589)||(33774115-33774294)
chr6 (397-587)||(20711636-20711826)
chr6 (399-589)||(30832443-30832632)
chr6 (398-589)||(19737611-19737800)
chr6 (397-589)||(28075781-28075975)
chr6 (399-561)||(27314097-27314259)
chr6 (399-589)||(17353952-17354142)
chr6 (489-589)||(24711007-24711107)
chr6 (481-572)||(1155849-1155940)
chr6 (480-588)||(34397856-34397964)
chr6 (413-589)||(235157-235334)
chr6 (487-583)||(2477590-2477686)
chr6 (487-583)||(6159442-6159538)
chr6 (492-583)||(21183686-21183777)
chr6 (399-467)||(24710914-24710982)
chr6 (488-583)||(20611794-20611889)
chr6 (504-582)||(4036953-4037031)
chr6 (481-566)||(30121783-30121868)
chr6 (397-450)||(20611924-20611977)
[»] chr5 (48 HSPs)
chr5 (410-589)||(34756292-34756471)
chr5 (399-589)||(15480006-15480194)
chr5 (397-589)||(27079006-27079199)
chr5 (397-589)||(16591988-16592179)
chr5 (405-589)||(2274885-2275069)
chr5 (405-589)||(19523194-19523378)
chr5 (399-589)||(36187795-36187984)
chr5 (413-589)||(9364286-9364462)
chr5 (413-589)||(16198723-16198899)
chr5 (397-589)||(38869277-38869468)
chr5 (399-572)||(31194528-31194699)
chr5 (405-589)||(30854324-30854508)
chr5 (397-572)||(22986471-22986646)
chr5 (480-589)||(28822338-28822447)
chr5 (399-588)||(16799240-16799431)
chr5 (413-582)||(27924084-27924253)
chr5 (485-589)||(40389537-40389641)
chr5 (413-562)||(7338021-7338170)
chr5 (480-586)||(23284058-23284164)
chr5 (413-589)||(7670919-7671104)
chr5 (480-583)||(1366522-1366625)
chr5 (480-572)||(31881430-31881521)
chr5 (480-581)||(36868872-36868973)
chr5 (480-583)||(11242314-11242417)
chr5 (480-583)||(33037781-33037884)
chr5 (480-583)||(34425904-34426007)
chr5 (481-583)||(14318382-14318484)
chr5 (488-582)||(24395741-24395835)
chr5 (480-572)||(2024638-2024730)
chr5 (488-572)||(10543685-10543769)
chr5 (488-583)||(2530901-2530996)
chr5 (414-572)||(40794257-40794415)
chr5 (399-464)||(40389453-40389518)
chr5 (480-524)||(606214-606258)
chr5 (488-568)||(26718953-26719033)
chr5 (488-568)||(26988697-26988777)
chr5 (480-571)||(10407474-10407565)
chr5 (481-583)||(2412089-2412191)
chr5 (482-572)||(22648734-22648824)
chr5 (481-583)||(41911614-41911716)
chr5 (487-571)||(17344969-17345053)
chr5 (399-467)||(23283943-23284011)
chr5 (480-524)||(27530543-27530587)
chr5 (400-467)||(28822253-28822320)
chr5 (395-441)||(29143416-29143462)
chr5 (397-467)||(31881346-31881416)
chr5 (487-523)||(22875003-22875039)
chr5 (480-520)||(35080766-35080806)
[»] chr3 (35 HSPs)
chr3 (398-589)||(54619120-54619311)
chr3 (398-589)||(38681010-38681201)
chr3 (399-589)||(36715942-36716133)
chr3 (399-589)||(21582769-21582960)
chr3 (399-589)||(47467682-47467872)
chr3 (398-585)||(8073256-8073442)
chr3 (399-585)||(27078486-27078673)
chr3 (399-585)||(27084283-27084470)
chr3 (413-589)||(34290568-34290744)
chr3 (400-589)||(3953816-3954004)
chr3 (398-585)||(42098803-42098990)
chr3 (399-589)||(43207157-43207345)
chr3 (413-589)||(37168365-37168541)
chr3 (413-589)||(44708475-44708650)
chr3 (405-589)||(53149238-53149422)
chr3 (413-589)||(53506815-53506992)
chr3 (405-572)||(36605980-36606146)
chr3 (411-587)||(18372479-18372658)
chr3 (399-586)||(50939152-50939338)
chr3 (410-588)||(50258553-50258731)
chr3 (399-572)||(54407073-54407249)
chr3 (480-587)||(9878686-9878793)
chr3 (488-583)||(32319162-32319257)
chr3 (488-583)||(8420330-8420425)
chr3 (516-589)||(29620423-29620496)
chr3 (413-588)||(48157138-48157302)
chr3 (480-583)||(54574826-54574929)
chr3 (399-461)||(29620364-29620426)
chr3 (480-566)||(26279563-26279649)
chr3 (492-545)||(23641329-23641382)
chr3 (488-572)||(28689368-28689452)
chr3 (480-556)||(42453435-42453511)
chr3 (399-467)||(48720429-48720497)
chr3 (481-572)||(25855437-25855527)
chr3 (481-572)||(49393105-49393195)
[»] chr7 (35 HSPs)
chr7 (399-589)||(18776683-18776873)
chr7 (399-589)||(29077215-29077404)
chr7 (405-589)||(8171463-8171646)
chr7 (399-589)||(12596207-12596394)
chr7 (395-589)||(23550984-23551178)
chr7 (410-562)||(26254015-26254167)
chr7 (413-588)||(10329341-10329516)
chr7 (399-589)||(20091197-20091388)
chr7 (387-584)||(19692094-19692291)
chr7 (399-589)||(38414793-38414983)
chr7 (399-572)||(28749722-28749895)
chr7 (480-589)||(10955479-10955588)
chr7 (413-585)||(8239686-8239857)
chr7 (399-589)||(24525599-24525792)
chr7 (399-589)||(48983756-48983951)
chr7 (399-589)||(47984885-47985077)
chr7 (481-561)||(33162338-33162418)
chr7 (399-589)||(25010428-25010611)
chr7 (481-572)||(9021799-9021890)
chr7 (481-573)||(6765680-6765772)
chr7 (480-572)||(23744808-23744900)
chr7 (480-583)||(2611260-2611363)
chr7 (480-583)||(7398452-7398555)
chr7 (488-583)||(36891579-36891674)
chr7 (402-467)||(40357300-40357365)
chr7 (488-572)||(23859085-23859169)
chr7 (488-583)||(12981327-12981422)
chr7 (480-583)||(27237421-27237524)
chr7 (482-560)||(36902924-36903002)
chr7 (481-567)||(21763586-21763672)
chr7 (487-560)||(18201161-18201234)
chr7 (488-572)||(20153213-20153297)
chr7 (480-523)||(12419493-12419536)
chr7 (530-569)||(40357414-40357453)
chr7 (481-537)||(9014177-9014233)
[»] chr4 (53 HSPs)
chr4 (411-589)||(38209520-38209698)
chr4 (399-589)||(34768492-34768681)
chr4 (405-589)||(47128987-47129170)
chr4 (399-589)||(54780777-54780968)
chr4 (399-589)||(32915385-32915575)
chr4 (413-589)||(43455463-43455638)
chr4 (399-589)||(2790659-2790848)
chr4 (399-589)||(34027579-34027768)
chr4 (415-584)||(37777156-37777325)
chr4 (399-589)||(32128584-32128774)
chr4 (399-589)||(10978900-10979092)
chr4 (411-589)||(1105532-1105709)
chr4 (399-557)||(17679432-17679589)
chr4 (399-524)||(55255322-55255447)
chr4 (398-589)||(19498504-19498692)
chr4 (399-589)||(48209240-48209436)
chr4 (399-589)||(5128758-5128949)
chr4 (399-589)||(16845021-16845210)
chr4 (397-589)||(35465107-35465297)
chr4 (399-589)||(37514659-37514848)
chr4 (412-558)||(10428129-10428273)
chr4 (399-589)||(16882313-16882502)
chr4 (415-585)||(54083176-54083345)
chr4 (415-561)||(51964736-51964884)
chr4 (411-583)||(35779257-35779426)
chr4 (490-589)||(13460207-13460306)
chr4 (399-589)||(40089516-40089714)
chr4 (480-549)||(51691913-51691982)
chr4 (413-589)||(38352197-38352362)
chr4 (399-562)||(16922245-16922409)
chr4 (487-583)||(27112036-27112132)
chr4 (390-524)||(23508418-23508553)
chr4 (480-571)||(52468304-52468395)
chr4 (501-583)||(4167910-4167992)
chr4 (480-545)||(9578662-9578728)
chr4 (480-560)||(39655252-39655332)
chr4 (530-589)||(23509846-23509905)
chr4 (480-589)||(24969437-24969536)
chr4 (487-572)||(36118463-36118548)
chr4 (487-572)||(36178689-36178774)
chr4 (487-583)||(2135326-2135422)
chr4 (480-572)||(10041998-10042090)
chr4 (480-560)||(39329390-39329470)
chr4 (480-583)||(24396940-24397043)
chr4 (398-467)||(24969718-24969787)
chr4 (415-470)||(2975358-2975413)
chr4 (481-524)||(24614018-24614061)
chr4 (489-583)||(37744916-37745011)
chr4 (480-522)||(30507120-30507162)
chr4 (544-589)||(55255269-55255314)
chr4 (480-572)||(36362869-36362961)
chr4 (490-525)||(15735154-15735189)
chr4 (397-449)||(9578573-9578625)
[»] chr1 (41 HSPs)
chr1 (398-589)||(44655747-44655937)
chr1 (399-589)||(14146306-14146495)
chr1 (402-589)||(16140061-16140247)
chr1 (399-589)||(5027555-5027746)
chr1 (410-589)||(23185433-23185611)
chr1 (405-589)||(50881436-50881618)
chr1 (398-585)||(17168966-17169152)
chr1 (399-589)||(5316686-5316875)
chr1 (399-589)||(6771797-6771989)
chr1 (396-589)||(4971533-4971725)
chr1 (413-589)||(19955723-19955898)
chr1 (399-560)||(22865378-22865538)
chr1 (399-589)||(27906646-27906824)
chr1 (411-572)||(21740864-21741027)
chr1 (410-589)||(3406424-3406603)
chr1 (410-589)||(3440217-3440396)
chr1 (399-589)||(9172940-9173130)
chr1 (399-589)||(9180922-9181112)
chr1 (414-589)||(1366812-1366985)
chr1 (480-589)||(27559643-27559752)
chr1 (392-589)||(40501700-40501897)
chr1 (416-589)||(41697072-41697244)
chr1 (415-573)||(6889633-6889789)
chr1 (415-573)||(6891479-6891635)
chr1 (415-587)||(51607374-51607545)
chr1 (395-589)||(13913394-13913589)
chr1 (481-583)||(38547035-38547137)
chr1 (480-583)||(39134720-39134824)
chr1 (480-583)||(45758506-45758609)
chr1 (487-572)||(33170782-33170867)
chr1 (402-467)||(34247154-34247219)
chr1 (481-583)||(6221690-6221791)
chr1 (481-572)||(26803971-26804059)
chr1 (488-583)||(43235774-43235871)
chr1 (480-572)||(38853545-38853637)
chr1 (480-523)||(17322621-17322664)
chr1 (530-569)||(34247066-34247105)
chr1 (480-581)||(5533326-5533428)
chr1 (488-570)||(35392295-35392376)
chr1 (397-589)||(44895658-44895845)
chr1 (414-583)||(50146308-50146476)
[»] chr8 (32 HSPs)
chr8 (399-589)||(2952137-2952329)
chr8 (405-589)||(30883324-30883509)
chr8 (399-589)||(3048435-3048625)
chr8 (405-589)||(13534612-13534794)
chr8 (405-589)||(13624152-13624334)
chr8 (410-589)||(45475812-45475990)
chr8 (395-589)||(23606544-23606737)
chr8 (399-584)||(37430076-37430261)
chr8 (410-585)||(5860671-5860848)
chr8 (398-589)||(23798178-23798369)
chr8 (399-589)||(42600777-42600967)
chr8 (413-589)||(10917386-10917561)
chr8 (399-589)||(41879176-41879364)
chr8 (488-583)||(8102913-8103008)
chr8 (480-583)||(7944521-7944624)
chr8 (414-583)||(41677106-41677276)
chr8 (503-583)||(5942697-5942777)
chr8 (480-583)||(15167414-15167517)
chr8 (480-572)||(5973106-5973198)
chr8 (480-572)||(11290196-11290288)
chr8 (399-467)||(20003728-20003796)
chr8 (480-572)||(34789861-34789953)
chr8 (488-583)||(15078759-15078854)
chr8 (489-583)||(5721560-5721654)
chr8 (481-583)||(39332405-39332507)
chr8 (480-524)||(8646265-8646309)
chr8 (481-524)||(9108553-9108596)
chr8 (481-560)||(30674403-30674482)
chr8 (488-524)||(34868184-34868220)
chr8 (488-583)||(25561502-25561595)
chr8 (487-524)||(23941097-23941134)
chr8 (480-520)||(38009151-38009191)
[»] scaffold0070 (1 HSPs)
scaffold0070 (399-589)||(1338-1527)
[»] scaffold0039 (1 HSPs)
scaffold0039 (399-589)||(106533-106723)
[»] scaffold1590 (1 HSPs)
scaffold1590 (480-572)||(257-349)
[»] scaffold0018 (1 HSPs)
scaffold0018 (487-583)||(173516-173612)
[»] scaffold0097 (1 HSPs)
scaffold0097 (487-583)||(38926-39022)
[»] scaffold0001 (2 HSPs)
scaffold0001 (399-523)||(183121-183244)
scaffold0001 (534-587)||(181916-181969)
[»] scaffold0012 (1 HSPs)
scaffold0012 (488-583)||(206496-206591)
[»] scaffold0182 (1 HSPs)
scaffold0182 (481-571)||(23993-24083)
[»] scaffold1320 (1 HSPs)
scaffold1320 (488-583)||(1355-1450)
[»] scaffold0007 (1 HSPs)
scaffold0007 (480-582)||(230858-230960)
[»] scaffold0227 (1 HSPs)
scaffold0227 (481-524)||(16125-16168)
[»] scaffold0022 (2 HSPs)
scaffold0022 (480-560)||(40109-40191)
scaffold0022 (480-560)||(138169-138251)


Alignment Details
Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 8 - 233
Target Start/End: Complemental strand, 12603594 - 12603371
Alignment:
Q  8 caaacaaatttaaatggtttaattacaatatatagttgaaattcatgaaccaatagaatacgatggctatgtattaacgtaacagaatagggattagcga 107  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12603594 caaacaaatttaaatggtttaattacaatata--gttgaaattcatgaaccaatagaatacgatggctatgtattaacgtaacagaatagggattagcga 12603497  T
Q  108 gttgtttaatcacgtaatgagaattgatatttggaattatccaaaggtcatggagttcaagaacgtgtccatgattccattaggccatgttcagccagtt 207  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  12603496 gttgtttaatcacgtaatgagaattgatatttggtattatccaaaggtcatggagttcaagaacgtgtccatgattccattaggccatgttcagccagta 12603397  T
Q  208 aacataagagcatggtgtgaatgctt 233  Q
    ||||||||||||||||||||||||||    
T  12603396 aacataagagcatggtgtgaatgctt 12603371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 398 - 589
Target Start/End: Complemental strand, 4506079 - 4505888
Alignment:
Q  398 tcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctat 497  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        ||||||||||||||||||    
T  4506079 tcagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctat 4505980  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||| |||||||||||||||||  |||||||||||||||    
T  4505979 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacc 4505888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 211 - 377
Target Start/End: Complemental strand, 12603355 - 12603185
Alignment:
Q  211 ataagagcatggtgtgaatgcttgtcattgtaattttacgttaaacaaataaaggactctccttttaagcttgttcaaataactac----ctttagacat 306  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    |||||||||     
T  12603355 ataaaagcatggtgtgaatgcttgtcattataattttacgttaaacaaataaaggactctccttataagctcgttcaaataactacgtacctttagacac 12603256  T
Q  307 gcaatccatgaagcacgaacacatacgcagatacgacacggacaccaacacacttacatagataataattt 377  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12603255 gcaattcatgaagcacgaacacatacacagatacgacacggacaccaacacacttacatagataataattt 12603185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 405 - 589
Target Start/End: Complemental strand, 6965183 - 6965001
Alignment:
Q  405 cgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatt 504  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||        |||||||||||||||||||||||||    
T  6965183 cgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaa--taattttttttaaaagagcaatgttctatttatatt 6965086  T
Q  505 ttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||  ||| |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  6965085 ttttaaaagataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 6965001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 3155401 - 3155211
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| |||||||||||||||||||||| |  ||||||||||||| || ||||||||| |||||||||        |||||||||||||||||||    
T  3155401 cagggccgtccctgagaattcggaggctcggctttaaaaatgaaaagaggtcagtgataaaattaaaacataattttttttaaaagagcaatgttctatt 3155302  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  3155301 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacccccacc 3155211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 12337365 - 12337556
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctat 497  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||         ||||||||||||||||||    
T  12337365 cagggccgtccctgagaattcgaaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatataatttttttttaaaagagcaatgttctat 12337464  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||||| ||   |||||||| |||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  12337465 ttatattttttaaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 12337556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 410 - 589
Target Start/End: Original strand, 8907007 - 8907187
Alignment:
Q  410 ctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctatttatatttttt 508  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||         ||||||| |||||||||||||||||||||    
T  8907007 ctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagtaatgttctatttatatttttt 8907106  T
Q  509 aaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||  || |||||||||||||||||| |||||| |||||||||||||||||  |||| ||||||||||    
T  8907107 aaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagaaacccccacc 8907187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 394 - 589
Target Start/End: Original strand, 29939776 - 29939970
Alignment:
Q  394 ttaatcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgtt 493  Q
    |||||||||  |||| ||||||||||| |||||||||||||| ||| |||||||| || ||||||||||||||| ||         ||||||||||||||    
T  29939776 ttaatcaggaccgtccctgagaattcgaaggctcggctctgggaataaaaagaggtcagtgataaaatcaaaacgta-ttttttttaaaagagcaatgtt 29939874  T
Q  494 ctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||| |||||||||||||| ||  |||||||||||||||||| | ||||||||||||||||||||||  ||||||||| |||||    
T  29939875 ctatttatattttttacaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccaccacc 29939970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 405 - 557
Target Start/End: Complemental strand, 40636315 - 40636164
Alignment:
Q  405 cgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatt 504  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||         |||||||||||||||||||||||||    
T  40636315 cgtccctgagaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaacata-ttttttttaaaagagcaatgttctatttatatt 40636217  T
Q  505 ttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaa 557  Q
    |||||||||||||||||||| ||  |||||||||||||||||| |||||||||    
T  40636216 ttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtgaa 40636164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 3953188 - 3953000
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    |||||||||| ||||||||| |||||||||||| |||||||||||||||| || ||||||||||||||  ||          ||||| | ||||||||||    
T  3953188 cagggtcgtccctgagaatttggaggctcggctttggaaatgaaaagaggtcagtgataaaatcaaaatgtatttttttt--aaagaccgatgttctatt 3953091  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||||| ||| ||||| |||||||||||| |||||||||||||| ||||||||   |||||||||||||||    
T  3953090 tatattttttaaaagataaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgaggaacccccacc 3953000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 405 - 567
Target Start/End: Complemental strand, 34694152 - 34693991
Alignment:
Q  405 cgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatt 504  Q
    |||| ||||||||||||||| |||| ||||||||||||||||||||  ||||||||||||||| ||         |||||||||||||||||||||||||    
T  34694152 cgtccctgagaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctatttatatt 34694054  T
Q  505 ttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactacc 567  Q
    |||||||||||||||||||| ||| ||||||||| |||||||| |||||| ||||||||||||    
T  34694053 ttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgactacc 34693991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 405 - 567
Target Start/End: Complemental strand, 34716564 - 34716403
Alignment:
Q  405 cgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatt 504  Q
    |||| ||||||||||||||| |||| ||||||||||||||||||||  ||||||||||||||| ||         |||||||||||||||||||||||||    
T  34716564 cgtccctgagaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctatttatatt 34716466  T
Q  505 ttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactacc 567  Q
    |||||||||||||||||||| ||| ||||||||| |||||||| |||||| ||||||||||||    
T  34716465 ttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgactacc 34716403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 26716313 - 26716122
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| || ||||||||  ||||||||| ||| |||||||||||| || ||||||||||||||| ||         |||||||||||||||||||    
T  26716313 cagggccgtccctaagaattcgttggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaacgtatttttttttaaaagagcaatgttctatt 26716214  T
Q  499 tatatttttt-aaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||| |||||||||||| ||| |||  ||||||||||||||||| | ||||||||||||||||||||||  |||||||||||||||    
T  26716213 tatatttttttaaaagataaatataaggtgccatatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 26716122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 395 - 586
Target Start/End: Complemental strand, 24410627 - 24410434
Alignment:
Q  395 taatcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnna--aaagagcaatgt 492  Q
    ||||||||| |||| || ||||||||||||||||| | ||| ||||||||||||||| ||||||||||||||| ||            ||| | ||||||    
T  24410627 taatcagggccgtccctaagaattcggaggctcggttttgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttttaaaaaacaatgt 24410528  T
Q  493 tctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaaccccc 586  Q
    |||||||||||||||||||||||||||| ||| ||| |||||||||||||||||| | ||||||||||||||||||||||  ||||||||||||    
T  24410527 tctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccccc 24410434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 413 - 589
Target Start/End: Original strand, 10762499 - 10762673
Alignment:
Q  413 agaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaa 512  Q
    |||||| |||||||| ||||||| ||||||||||||||| ||||||||| ||||| |           ||||||||||||||||||||||||||||||||    
T  10762499 agaatttggaggctcagctctgggaatgaaaagaggccagtgataaaattaaaacgt--tttttttttaaagagcaatgttctatttatattttttaaaa 10762596  T
Q  513 gataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||| ||| ||| ||||||||| |||||||| | ||||||||||||||||||||||  |||||||||||||||    
T  10762597 gataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 10762673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 397 - 589
Target Start/End: Original strand, 27506657 - 27506848
Alignment:
Q  397 atcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttcta 496  Q
    ||||||| |||| || ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||| ||         |||| ||||||| ||||    
T  27506657 atcagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtattttttaaaaaaa-agcaatgatcta 27506755  T
Q  497 tttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||| ||| ||| ||||||||| |||||||| | |||| ||||||||||| |||||  |||||||| ||||||    
T  27506756 tttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtaaaaatgactactgtatacatgaggaactcccacc 27506848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 398 - 585
Target Start/End: Complemental strand, 7162968 - 7162782
Alignment:
Q  398 tcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctat 497  Q
    |||||| |||| |||||| |||| |||||| |||| || ||||||||||||||| ||||||||| ||||  |          |||||||| |||||||||    
T  7162968 tcagggccgtccctgagatttcgaaggctcagctcggggaatgaaaagaggccagtgataaaattaaaatgtc-ttttttttaaaagagcgatgttctat 7162870  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccc 585  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||| ||  ||||||||||||||||||||||||| |||||||||||    
T  7162869 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgaggaacccc 7162782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 413 - 589
Target Start/End: Complemental strand, 9046199 - 9046023
Alignment:
Q  413 agaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatttttt-aaa 511  Q
    ||||||||  ||||| ||||||| ||| ||||||||||| ||||||||||||||| ||         |||||| |||||||||||||||||||||| |||    
T  9046199 agaattcgttggctcagctctgggaattaaaagaggccagtgataaaatcaaaacgta-ttgtttttaaaagaacaatgttctatttatatttttttaaa 9046101  T
Q  512 agataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||| ||| ||| |||||||||||||||||| | ||||||||||||||||||||||  |||||||||||||||    
T  9046100 agataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 9046023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 398 - 557
Target Start/End: Original strand, 5952635 - 5952791
Alignment:
Q  398 tcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctat 497  Q
    |||| |||||| ||||||||||||||| |||||||| | ||||||||||||||| ||||||||||||||| ||         |||||||||||||| |||    
T  5952635 tcagtgtcgtccctgagaattcggaggttcggctctcggaatgaaaagaggccaatgataaaatcaaaacgta-ttttttttaaaagagcaatgttatat 5952733  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaa 557  Q
    ||||  ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  5952734 ttat--tttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 5952791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 411 - 512
Target Start/End: Original strand, 1396629 - 1396730
Alignment:
Q  411 tgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaa 510  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  1396629 tgagaattcggaggctcgactctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatttatattttttaa 1396728  T
Q  511 aa 512  Q
    ||    
T  1396729 aa 1396730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 480 - 583
Target Start/End: Complemental strand, 16097111 - 16097008
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| ||| |||||||||  ||||||| | |||||||||| |||||| ||||  |||||    
T  16097111 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgagg 16097012  T
Q  580 aacc 583  Q
    ||||    
T  16097011 aacc 16097008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 480 - 581
Target Start/End: Original strand, 24035544 - 24035645
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| ||| ||||| ||||| |||||| | |||||||||| ||||||| |||  |||||    
T  24035544 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatgagg 24035643  T
Q  580 aa 581  Q
    ||    
T  24035644 aa 24035645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 480 - 566
Target Start/End: Original strand, 13800543 - 13800630
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtaca-ccaagaggtgaaaatgactac 566  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||| ||| ||||||||||| |||| |||| |||||||||| |||||    
T  13800543 aaaagaacaatgttctatttaaattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaaggtgaaaatcactac 13800630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 480 - 583
Target Start/End: Original strand, 21665699 - 21665802
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||||| |||||||||||||| ||||||||||||||||||||| | ||  ||||||||| | |||| ||| | |||||||| |||||||||||  |||||    
T  21665699 aaaagaacaatgttctatttaaattttttaaaagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgagg 21665798  T
Q  580 aacc 583  Q
    ||||    
T  21665799 aacc 21665802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 480 - 583
Target Start/End: Original strand, 28425709 - 28425812
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||||| |||||||||||||| |  |||||||||||||||||||| ||  |||||||||| ||||||| | | |||||||| |||||| ||||| |||||    
T  28425709 aaaagaacaatgttctatttaaaaattttaaaagataaatacaaggtgtcgtatatatgcagtacacccaaatgtgaaaatcactaccatatatatgagg 28425808  T
Q  580 aacc 583  Q
    ||||    
T  28425809 aacc 28425812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 482 - 583
Target Start/End: Complemental strand, 38400899 - 38400798
Alignment:
Q  482 aagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaa 581  Q
    |||| |||||||||||||| ||||||||||||||||||||||| ||   |||||||||| ||||   | |||||||||| |||||||||||  |||||||    
T  38400899 aagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaa 38400800  T
Q  582 cc 583  Q
    ||    
T  38400799 cc 38400798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 415 - 520
Target Start/End: Complemental strand, 8327785 - 8327681
Alignment:
Q  415 aattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaaga 514  Q
    ||||||||||||| | |||||||||||||||||  || ||||||||||||||| ||         |||| ||||||| ||||||||||||||||||||||    
T  8327785 aattcggaggctcagttctggaaatgaaaagagatcagtgataaaatcaaaacgtattttttttaaaaa-agcaatgatctatttatattttttaaaaga 8327687  T
Q  515 taaata 520  Q
    ||||||    
T  8327686 taaata 8327681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 480 - 572
Target Start/End: Original strand, 12134039 - 12134131
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    |||||| |||||||||||||| |   ||||||||||||||||||| | | ||||||||||| |||||| | | |||||||| |||||||||||    
T  12134039 aaaagaacaatgttctatttaaaaaatttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtata 12134131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 566
Target Start/End: Original strand, 16227368 - 16227453
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactac 566  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||| ||  ||||||||| | |||||| | || ||||||| |||||    
T  16227368 aaagaacaattttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacaccgatagatgaaaatcactac 16227453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 480 - 521
Target Start/End: Original strand, 22727456 - 22727497
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatac 521  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  22727456 aaaagaacaatgttctatttaaattttttaaaagataaatac 22727497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 480 - 523
Target Start/End: Original strand, 7742132 - 7742176
Alignment:
Q  480 aaaagagcaatgttctatttata-ttttttaaaagataaatacaa 523  Q
    |||||| |||||||||||||||| |||||||||||||||||||||    
T  7742132 aaaagaacaatgttctatttatatttttttaaaagataaatacaa 7742176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 520
Target Start/End: Complemental strand, 42029247 - 42029208
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaata 520  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  42029247 aaagaacaatgttctatttaaattttttaaaagataaata 42029208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 524
Target Start/End: Complemental strand, 10252511 - 10252475
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaag 524  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  10252511 aatgttcaatttaaattttttaaaagataaatacaag 10252475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 517
Target Start/End: Original strand, 11952588 - 11952624
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataa 517  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  11952588 aaagaacaatgttctatttaaattttttaaaagataa 11952624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 135; Significance: 5e-70; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 13727317 - 13727507
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        |||||||||||||||||||    
T  13727317 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatt 13727416  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  13727417 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 13727507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 398 - 589
Target Start/End: Complemental strand, 21280734 - 21280543
Alignment:
Q  398 tcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctat 497  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        ||||||||||||||||||    
T  21280734 tcagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctat 21280635  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||| |||||||||||||||||  |||||||| ||||||    
T  21280634 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaactcccacc 21280543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 21479683 - 21479492
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctat 497  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||         ||||||||||||||||||    
T  21479683 cagggccgtctctgagaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagcaatgttctat 21479584  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  21479583 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 21479492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 397 - 589
Target Start/End: Original strand, 27788606 - 27788796
Alignment:
Q  397 atcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttcta 496  Q
    ||||||| |||| || ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||         ||||||||||| |||||    
T  27788606 atcagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta--tttttttaaaagagcaattttcta 27788703  T
Q  497 tttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||||||||| | ||||||||||||||||||||||  |||||||||||||||    
T  27788704 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 27788796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 411 - 589
Target Start/End: Complemental strand, 33774294 - 33774115
Alignment:
Q  411 tgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctatttatatttttta 509  Q
    |||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||         ||||||| ||||||||||||||||||||||    
T  33774294 tgagaattcggaggctcggctctgaaaatgaaaagaggccagtaataaaatcaaaacataatttttttttaaaagagtaatgttctatttatatttttta 33774195  T
Q  510 aaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||| ||| |||||||||||||||||| | | ||||||||||||||||||||  |||||||||||||||    
T  33774194 aaagataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgaggaacccccacc 33774115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 397 - 587
Target Start/End: Original strand, 20711636 - 20711826
Alignment:
Q  397 atcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttcta 496  Q
    ||||||| |||| |||||||||||||||||||| ||||| |||||||||||| || | ||||||||||||| ||         |||||||||||||||||    
T  20711636 atcagggacgtccctgagaattcggaggctcggttctgggaatgaaaagaggtcagtcataaaatcaaaacgtatttttttttaaaagagcaatgttcta 20711735  T
Q  497 tttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaaccccca 587  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||||||||| | ||||||||||||||||||||||  |||||||||||||    
T  20711736 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccccca 20711826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 30832443 - 30832632
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| ||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| ||         ||||| || ||||||||||    
T  30832443 cagggccgtccctgagaattcgaaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-tttttttaaaaagcgcgatgttctatt 30832541  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    || ||||||||||| ||||||||||||||| ||||||||| |||||||| |||| ||||||||||||||||||   |||||||||||||||    
T  30832542 tacattttttaaaaaataaatacaagatgccgtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgaggaacccccacc 30832632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 398 - 589
Target Start/End: Original strand, 19737611 - 19737800
Alignment:
Q  398 tcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctat 497  Q
    ||||||||||| ||||||||| | ||| |||||||| | | ||||||||||||| ||||||||||||||  |          ||||||||||||||||||    
T  19737611 tcagggtcgtccctgagaatttgaaggttcggctctagga-tgaaaagaggccagtgataaaatcaaaatgtt-ttttttttaaaagagcaatgttctat 19737708  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||| ||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  19737709 ttatatttttttaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacccccacc 19737800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 397 - 589
Target Start/End: Complemental strand, 28075975 - 28075781
Alignment:
Q  397 atcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnna---aaagagcaatgtt 493  Q
    |||||||||||| || |||||| |||||||||||||||| ||||||||||||||| ||| ||||||||||| ||             ||| |||||||||    
T  28075975 atcagggtcgtc-ctaagaatttggaggctcggctctgggaatgaaaagaggccagtgaaaaaatcaaaacgtattttttttattttaaaaagcaatgtt 28075877  T
Q  494 ctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||||||| |||||| | ||||||||||||||||||||||  |||||||||||||||    
T  28075876 ctatttatattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 28075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 399 - 561
Target Start/End: Original strand, 27314097 - 27314259
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| |||| |||||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||         |||||||||||||||||||    
T  27314097 cagggccgtccctgaaaattcggaggctcgactctgggaatgaaaagaggccagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctatt 27314195  T
Q  499 tatattttttaaaa-gataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatg 561  Q
    |||||||||||||| |||||||||||| ||| |||||||||||||||||  |||||||||||||    
T  27314196 tatattttttaaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatg 27314259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 17354142 - 17353952
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| || |||||||||||||||| |||| | |||||||||||| || ||||||||||||||| ||         |||| ||||||||||||||    
T  17354142 cagggccgtccctaagaattcggaggctcgactcttggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaaaaagcaatgttctatt 17354043  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||| ||| ||  |||||||||||||||||| | | ||||||||||||| ||||||  ||| |||||||||||    
T  17354042 tatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatgatgaacccccacc 17353952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 489 - 589
Target Start/End: Original strand, 24711007 - 24711107
Alignment:
Q  489 atgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccac 588  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||  ||||||||||||||||||||||||  ||||||||||||||    
T  24711007 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgaggaacccccac 24711106  T
Q  589 c 589  Q
    |    
T  24711107 c 24711107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 481 - 572
Target Start/End: Original strand, 1155849 - 1155940
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||   ||||||||||||||| | ||||||||||||||||||||||||    
T  1155849 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtata 1155940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 480 - 588
Target Start/End: Complemental strand, 34397964 - 34397856
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||| | |||| |||||||||| |||| |  |||||    
T  34397964 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatgagg 34397865  T
Q  580 aacccccac 588  Q
    |||| ||||    
T  34397864 aacctccac 34397856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 413 - 589
Target Start/End: Original strand, 235157 - 235334
Alignment:
Q  413 agaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaa 512  Q
    |||||||||||| |||||| ||  ||||||||||| ||| ||||||||||||||| ||         |||| ||||||| ||||||||||||||||||||    
T  235157 agaattcggaggttcggctatgagaatgaaaagagaccagtgataaaatcaaaacgtatttttttttaaaa-agcaatgatctatttatattttttaaaa 235255  T
Q  513 gataaatacaagatgc--tgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||| ||| |||   |||||||| | ||||||| | || |||||||||||||||||||  |||| ||||||||||    
T  235256 gataaatataaggtgccgggtatatataccgtacacccaaagatgaaaatgactaccgtatacatgagaaacccccacc 235334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 487 - 583
Target Start/End: Original strand, 2477590 - 2477686
Alignment:
Q  487 caatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    |||||||| ||||| ||||||||||||||||||||||| ||   |||||||||| |||||||| | |||||||| |||||||||||  |||||||||    
T  2477590 caatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 2477686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 487 - 583
Target Start/End: Complemental strand, 6159538 - 6159442
Alignment:
Q  487 caatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    |||||||||||||||||||||||||||||||||||||  ||  ||||||||||||||||   | ||||| |||| |||||||||||| | |||||||    
T  6159538 caatgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtacattcaaaggtggaaatcactaccgtatatataaggaacc 6159442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 492 - 583
Target Start/End: Original strand, 21183686 - 21183777
Alignment:
Q  492 ttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    ||||||||| ||||||||||||||||||||||  |   ||||||||| |||||||| | || ||||||| |||||||||||  |||||||||    
T  21183686 ttctatttaaattttttaaaagataaatacaaagtagcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgaggaacc 21183777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 467
Target Start/End: Original strand, 24710914 - 24710982
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaac 467  Q
    ||||| |||| |||||||||||||||||| |||| || ||||||||||||  | |||||||||||||||    
T  24710914 cagggccgtccctgagaattcggaggctcagctcagggaatgaaaagaggttagtgataaaatcaaaac 24710982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 488 - 583
Target Start/End: Complemental strand, 20611889 - 20611794
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    ||||||||| ||| |||||||||| |||||||||||| ||  |||||||| ||  ||| | | |||||||||| |||||||||||  |||||||||    
T  20611889 aatgttctacttaaattttttaaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgaggaacc 20611794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 504 - 582
Target Start/End: Complemental strand, 4037031 - 4036953
Alignment:
Q  504 tttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaac 582  Q
    ||||||| ||||||||||||| ||| ||||||||  |||||||| | |||| || || |||||||||||| ||||||||    
T  4037031 tttttaagagataaatacaaggtgccgtatatatatggtacacccaaaggtaaagatcactaccgtatatatgaggaac 4036953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 481 - 566
Target Start/End: Complemental strand, 30121868 - 30121783
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactac 566  Q
    ||||| ||||||| |||||| ||||||||||| ||||||||||| ||   |||||||||| |||| | | |||||||||| |||||    
T  30121868 aaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatgcgatacatccaaaggtgaaaatcactac 30121783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 450
Target Start/End: Complemental strand, 20611977 - 20611924
Alignment:
Q  397 atcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggcc 450  Q
    |||||||||||  ||  ||||||||||||||||||||| || ||||||||||||    
T  20611977 atcagggtcgttcctacgaattcggaggctcggctctgtaagtgaaaagaggcc 20611924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 3e-68; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 410 - 589
Target Start/End: Original strand, 34756292 - 34756471
Alignment:
Q  410 ctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatttttta 509  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  34756292 ctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatttatatttttta 34756391  T
Q  510 aaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  34756392 aaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 34756471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 15480006 - 15480194
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||          ||||| | ||||||||||    
T  15480006 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacatatttttttt--aaagaccgatgttctatt 15480103  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||   |||||||||||||||    
T  15480104 tatattttttaaaagataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgaggaacccccacc 15480194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 397 - 589
Target Start/End: Complemental strand, 27079199 - 27079006
Alignment:
Q  397 atcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn-aaaagagcaatgttct 495  Q
    ||||||| |||| |||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||| ||          ||||||||||||||||    
T  27079199 atcagggccgtccctgagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttct 27079100  T
Q  496 atttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||| | |||||||||||||||| |||||  |||||||||||||||    
T  27079099 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatgaggaacccccacc 27079006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 397 - 589
Target Start/End: Original strand, 16591988 - 16592179
Alignment:
Q  397 atcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttcta 496  Q
    ||||||| ||||  |||||||| |||||||||||||||  ||||||||||||||| ||||||||||||||||||         |||||||||||||||||    
T  16591988 atcagggccgtccttgagaatttggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaacata-ttttttttaaaagagcaatgttcta 16592086  T
Q  497 tttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||| ||||||||||||||| | ||  |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  16592087 tttatattttctaaaagataaatacagggtgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgaggaacccccacc 16592179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 405 - 589
Target Start/End: Complemental strand, 2275069 - 2274885
Alignment:
Q  405 cgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatt 504  Q
    |||| |||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| ||         |||||||| ||||||||||||||||    
T  2275069 cgtccctgagaattcggaggctcggttctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaagagcgatgttctatttatatt 2274970  T
Q  505 ttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||| |   |||||||||| ||||||| ||||||||||||||||||||||||   ||||||||||||||    
T  2274969 ttttaaaagataaatacaaggtatcgtatatatgcagtacacccagaggtgaaaatgactaccgtatacacgaggaacccccacc 2274885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 405 - 589
Target Start/End: Complemental strand, 19523378 - 19523194
Alignment:
Q  405 cgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatt 504  Q
    |||| |||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| |           |||||||  |||||||||||||||    
T  19523378 cgtccctgagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtgttttttttttaaagagcggtgttctatttatatt 19523279  T
Q  505 ttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| ||||  |||||||||||||||    
T  19523278 ttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgaggaacccccacc 19523194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 36187795 - 36187984
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| |||||||||||||||||||||||||| |||||||||||| || ||||||||||||||| |          |||||||| ||||||||||    
T  36187795 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtt-ttttttttaaaagagcgatgttctatt 36187893  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||| ||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||  |||| |||| |||||    
T  36187894 tatattttttaaaatataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagaaacctccacc 36187984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 413 - 589
Target Start/End: Complemental strand, 9364462 - 9364286
Alignment:
Q  413 agaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaa 512  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| ||           || ||||||||||||||||||||||||||||    
T  9364462 agaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttttaaaagcaatgttctatttatattttttaaaa 9364363  T
Q  513 gataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||| ||| ||| |||||||||||||||||| | ||||||||||||||||||||||  |||||||||||||||    
T  9364362 gataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 9364286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 413 - 589
Target Start/End: Original strand, 16198723 - 16198899
Alignment:
Q  413 agaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaa 512  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||          ||| ||||||||||||||||||||||||||||    
T  16198723 agaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaaagcaatgttctatttatattttttaaaa 16198822  T
Q  513 gataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||| ||| ||  ||||||||||| |||||| | ||||||||||||||||||||||  |||||||||||||||    
T  16198823 gataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 16198899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 397 - 589
Target Start/End: Original strand, 38869277 - 38869468
Alignment:
Q  397 atcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttcta 496  Q
    ||||||| |||| || ||||||||||||||||||||||| |||||||||||| || | ||||||||||||| ||         |||||||||||||||||    
T  38869277 atcagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggtcagttataaaatcaaaacgta-ttttttttaaaagagcaatgttcta 38869375  T
Q  497 tttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||| ||| ||  |||||||||||||||||| | ||||||||||||||||||||||  |||| ||||||||||    
T  38869376 tttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc 38869468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 399 - 572
Target Start/End: Original strand, 31194528 - 31194699
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| |||| ||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| ||         |||||||||||||||||||    
T  31194528 cagggccgtccctgaaaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgta-tttcttttaaaagagcaatgttctatt 31194626  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| ||| |||||||||||| |||||||||||    
T  31194627 tatattttttaaaagataaatacaaggtgccgtatatatgcggtaaacccagaggtgaaaat-actaccgtata 31194699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 405 - 589
Target Start/End: Complemental strand, 30854508 - 30854324
Alignment:
Q  405 cgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatt 504  Q
    |||| |||| |||| |||||||||||||||| |||||||| ||| ||  |||||||| ||||| ||         |||||||||||||||||||||||||    
T  30854508 cgtccctgataatttggaggctcggctctgggaatgaaaaaaggtcagcgataaaattaaaacgtatttttttttaaaagagcaatgttctatttatatt 30854409  T
Q  505 ttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||| ||| |||||||||||||||||  ||||||||||||||||| ||||||  |||||||||||||||    
T  30854408 ttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatgaggaacccccacc 30854324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 397 - 572
Target Start/End: Original strand, 22986471 - 22986646
Alignment:
Q  397 atcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttcta 496  Q
    ||||||| ||||  ||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||| |||        |||||||||||||||||    
T  22986471 atcagggccgtccgtgagaattcggaggctcagctctgagaatgaaaagaggccagtgataaaatcaaaacgtaattttttttaaaagagcaatgttcta 22986570  T
Q  497 tttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    || ||||||||||||||| ||||||||  ||  |||||||||||||||||| | ||||||||||||||||||||||    
T  22986571 ttaatattttttaaaagacaaatacaaagtgtcgtatatatgcggtacacccataggtgaaaatgactaccgtata 22986646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 480 - 589
Target Start/End: Original strand, 28822338 - 28822447
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||| | ||||||||||||||||||||||  ||| |    
T  28822338 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgatg 28822437  T
Q  580 aacccccacc 589  Q
    ||||||||||    
T  28822438 aacccccacc 28822447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 399 - 588
Target Start/End: Original strand, 16799240 - 16799431
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn-aaaagagcaa-tgttcta 496  Q
    ||||| |||| || ||||||||||||||||||||||| |||||||||| | || ||||||||||||||| ||          ||||||| || |||||||    
T  16799240 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagatgtcagtgataaaatcaaaacgtattttttttttaaaagagtaaatgttcta 16799339  T
Q  497 tttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccac 588  Q
    |||||||||||||||| ||||||| ||| ||| |||||||||||||||||| | |||||||||||| |||||||||  ||||||||||||||    
T  16799340 tttatattttttaaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacccccac 16799431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 413 - 582
Target Start/End: Complemental strand, 27924253 - 27924084
Alignment:
Q  413 agaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaa 512  Q
    ||||||||| |||||| |||||  ||||||||||||||| ||||||||||||||| ||         |||| |||||||  |||||||||||||||||||    
T  27924253 agaattcgggggctcgactctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaagcaatgacctatttatattttttaaaa 27924154  T
Q  513 gataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaac 582  Q
    |||||||| ||| ||| |||||||||||||||| | | |||| |||||||||||||||||  ||||||||    
T  27924153 gataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgaggaac 27924084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 485 - 589
Target Start/End: Original strand, 40389537 - 40389641
Alignment:
Q  485 agcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaaccc 584  Q
    |||||||||||||||||||||||||||||||||||| ||| ||  |||||||||||||||| | | ||||||||||||||||||||| | ||||||||||    
T  40389537 agcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatttatgaggaaccc 40389636  T
Q  585 ccacc 589  Q
    |||||    
T  40389637 ccacc 40389641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 413 - 562
Target Start/End: Complemental strand, 7338170 - 7338021
Alignment:
Q  413 agaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaa 512  Q
    |||||| |||||||||||||| | |||||||||||| ||  |||||||||||||| |           ||||||||||||||||||||||||||||||||    
T  7338170 agaatttggaggctcggctctaggaatgaaaagaggtcaaggataaaatcaaaacgttttttttttttaaagagcaatgttctatttatattttttaaaa 7338071  T
Q  513 gataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatga 562  Q
    |||||||||||| ||  |||||||||||||||||| | ||||||||||||    
T  7338070 gataaatacaaggtgtcgtatatatgcggtacacctaaaggtgaaaatga 7338021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 480 - 586
Target Start/End: Original strand, 23284058 - 23284164
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    ||||||||||||||||||||||||||||||||   |||||||||| ||  |||||||||||||||||| | || |||||||||||||||||||  |||||    
T  23284058 aaaagagcaatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatgcggtacacccaaagatgaaaatgactaccgtatacatgagg 23284157  T
Q  580 aaccccc 586  Q
    |||||||    
T  23284158 aaccccc 23284164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 413 - 589
Target Start/End: Complemental strand, 7671104 - 7670919
Alignment:
Q  413 agaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn--------aaaagagcaatgttctatttatatt 504  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||                 |||| ||||||||||||||||||||    
T  7671104 agaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttttaaaaaaaaaaagcaatgttctatttatatt 7671005  T
Q  505 tttt-aaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||| |||||||||||| ||| ||| |||||| | ||||||||| | ||||||||||||||||||||||  ||||| | |||||||    
T  7671004 tttttaaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtatacatgaggtatccccacc 7670919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 480 - 583
Target Start/End: Original strand, 1366522 - 1366625
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||||| |||||||||||||| |||||||| |||||||||||||||||  ||||||||||| |||||| | | |||||||| |||||||||||| |||||    
T  1366522 aaaagaacaatgttctatttaaattttttataagataaatacaagatgtggtatatatgcgatacacctaaatgtgaaaatcactaccgtatatatgagg 1366621  T
Q  580 aacc 583  Q
    ||||    
T  1366622 aacc 1366625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 480 - 572
Target Start/End: Original strand, 31881430 - 31881521
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||| ||| | |||| ||||||| |||||||||||    
T  31881430 aaaagagcaatgttctatttatattttttaaaagataaatacacggtgccgtatatatgcggaacatccagagatgaaaat-actaccgtata 31881521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 480 - 581
Target Start/End: Original strand, 36868872 - 36868973
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||||| ||||||||||||||  |||||||||||||||||||||| ||  ||||||||| |||||||| | | |||||||| |||||||||||  |||||    
T  36868872 aaaagaacaatgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgagg 36868971  T
Q  580 aa 581  Q
    ||    
T  36868972 aa 36868973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 480 - 583
Target Start/End: Original strand, 11242314 - 11242417
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||||| ||||||||||||||  ||||||||||||||||||||| ||| |||||||||| | |||| | | || || |||| |||||||||||  |||||    
T  11242314 aaaagaacaatgttctatttaatttttttaaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatgagg 11242413  T
Q  580 aacc 583  Q
    ||||    
T  11242414 aacc 11242417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 480 - 583
Target Start/End: Complemental strand, 33037884 - 33037781
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||||   |||||||||  ||||||| | |||||||||  | |||||||||  |||||    
T  33037884 aaaagaacaatgttttatttaaattttttaaaagataaatacaagatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgagg 33037785  T
Q  580 aacc 583  Q
    ||||    
T  33037784 aacc 33037781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 480 - 583
Target Start/End: Complemental strand, 34426007 - 34425904
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||||| |||||||||||||  ||||||||||||||||||||||| ||| ||||||||| | |||||| | || | ||||| | |||||||||  |||||    
T  34426007 aaaagaacaatgttctatttcaattttttaaaagataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatgagg 34425908  T
Q  580 aacc 583  Q
    ||||    
T  34425907 aacc 34425904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 481 - 583
Target Start/End: Original strand, 14318382 - 14318484
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagga 580  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| ||  ||||||||| | |||| | | |  ||||||| |||||||||||  ||||||    
T  14318382 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgagga 14318481  T
Q  581 acc 583  Q
    |||    
T  14318482 acc 14318484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 582
Target Start/End: Complemental strand, 24395835 - 24395741
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaac 582  Q
    ||||||||||||| ||||||||||||||||||||||| || ||||||||| |  |||| | | |||||||||| || ||||||||  ||||||||    
T  24395835 aatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatacaatacatccaaaggtgaaaatcaccaccgtatagatgaggaac 24395741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 480 - 572
Target Start/End: Original strand, 2024638 - 2024730
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||  ||| ||||||||| | |||||| | || ||||||| |||||| ||||    
T  2024638 aaaagaacaatgttctatttaaatttttttaaagataaatacaatgtgccgtatatatgtgatacacccaaagatgaaaatcactaccatata 2024730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 10543769 - 10543685
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    ||||||| | ||| ||||||||||||||||||| ||| || |||||||||||| |||| | | |||||||||| |||||||||||    
T  10543769 aatgttccacttaaattttttaaaagataaatataaggtgatgtatatatgcgatacatccaaaggtgaaaatcactaccgtata 10543685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 488 - 583
Target Start/End: Original strand, 2530901 - 2530996
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    |||||||||||||  |||||||||||||||||||||  ||  |||||||| ||||||| | | |||||||||| ||||| |||||  |||||||||    
T  2530901 aatgttctatttaagttttttaaaagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgaggaacc 2530996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 414 - 572
Target Start/End: Original strand, 40794257 - 40794415
Alignment:
Q  414 gaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaag 513  Q
    ||||||||||||||||||||| || |||||||||||   | ||||||| ||||| |          |||||| ||||||| |||||| ||||||||||||    
T  40794257 gaattcggaggctcggctctgtaagtgaaaagaggctcgtaataaaataaaaacgtttttttttttaaaagaacaatgttttatttaaattttttaaaag 40794356  T
Q  514 ataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    | ||||||||   || ||| ||||  | |||||||| |||||||||| |||||||||||    
T  40794357 acaaatacaaagagccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtata 40794415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 464
Target Start/End: Original strand, 40389453 - 40389518
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaa 464  Q
    ||||||| || || ||||||||||||||||||||||| |||||||||| | || ||||||||||||    
T  40389453 cagggtcatccctaagaattcggaggctcggctctgggaatgaaaagatgtcagtgataaaatcaa 40389518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 480 - 524
Target Start/End: Complemental strand, 606258 - 606214
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaag 524  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  606258 aaaagaacaatgttctatttaaattttttaaaagataaatacaag 606214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 488 - 568
Target Start/End: Original strand, 26718953 - 26719033
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccg 568  Q
    ||||||||||||| | ||||||||||||||||||||  ||  ||||||||||| |||||  | |||||||||| |||||||    
T  26718953 aatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccg 26719033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 488 - 568
Target Start/End: Original strand, 26988697 - 26988777
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccg 568  Q
    ||||||||||||| | ||||||||||||||||||||  ||  ||||||||||| |||||  | |||||||||| |||||||    
T  26988697 aatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccg 26988777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 480 - 571
Target Start/End: Complemental strand, 10407565 - 10407474
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtat 571  Q
    |||||| |||||||||||||| ||||||||||||||||| ||||| ||  ||| |||||  ||||| | | | |||||||| ||||||||||    
T  10407565 aaaagaacaatgttctatttaaattttttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtat 10407474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 583
Target Start/End: Complemental strand, 2412191 - 2412089
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagga 580  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||  ||  ||||||||||| | || | | | |||||||| ||||| |||||  ||||||    
T  2412191 aaagaacaatgttctatttaaattttttaaaaaataaatacaaagtgtcgtatatatgcgatgcatccaaatgtgaaaatcactactgtatacatgagga 2412092  T
Q  581 acc 583  Q
    |||    
T  2412091 acc 2412089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 572
Target Start/End: Original strand, 22648734 - 22648824
Alignment:
Q  482 aagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    |||| |||||||||||||| ||||||||||||||||||||||  ||  ||||||||| || ||| | | |||||| ||| ||||| |||||    
T  22648734 aagaacaatgttctatttaaattttttaaaagataaatacaatgtgtcgtatatatgtggcacatccaaaggtgacaatcactactgtata 22648824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 583
Target Start/End: Original strand, 41911614 - 41911716
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagga 580  Q
    ||||| |||||||| | |||  |||||||||||| ||||||||| ||  ||||||| |||||||||| | | || ||||| |||| ||||||| ||||||    
T  41911614 aaagaacaatgttcaacttaatttttttaaaagagaaatacaaggtgtcgtatataagcggtacacccaaaagtaaaaatcactatcgtatatatgagga 41911713  T
Q  581 acc 583  Q
    |||    
T  41911714 acc 41911716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 571
Target Start/End: Complemental strand, 17345053 - 17344969
Alignment:
Q  487 caatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtat 571  Q
    |||||||||||||| |||||||| |  ||||||||||||||   | ||||||||||||||| | || | ||||| ||||||||||    
T  17345053 caatgttctatttaaattttttatataataaatacaagatgtcatgtatatgcggtacacccaaagataaaaattactaccgtat 17344969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 467
Target Start/End: Original strand, 23283943 - 23284011
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaac 467  Q
    ||||| |||| |||||||||| ||||||| | | | | ||||||||||||||| |||||||||||||||    
T  23283943 cagggccgtccctgagaattcagaggctcagttttaggaatgaaaagaggccagtgataaaatcaaaac 23284011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 480 - 524
Target Start/End: Complemental strand, 27530587 - 27530543
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaag 524  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  27530587 aaaagaacaatgttctatttaaattttttaaaagattaatacaag 27530543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 467
Target Start/End: Original strand, 28822253 - 28822320
Alignment:
Q  400 agggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaac 467  Q
    |||| |||| || |||||||||||| |||||| ||| ||||||||||||  | |||||||||||||||    
T  28822253 agggccgtccctaagaattcggaggttcggctttgggaatgaaaagaggttagtgataaaatcaaaac 28822320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 441
Target Start/End: Original strand, 29143416 - 29143462
Alignment:
Q  395 taatcagggtcgtcgctgagaattcggaggctcggctctggaaatga 441  Q
    |||||||||||||   | |||||||||||||||||||||||||||||    
T  29143416 taatcagggtcgttcataagaattcggaggctcggctctggaaatga 29143462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 467
Target Start/End: Original strand, 31881346 - 31881416
Alignment:
Q  397 atcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaac 467  Q
    ||||||| |||| |||| ||||  ||||||||||||||| ||||||||| || || | |||||||||||||    
T  31881346 atcagggccgtccctgaaaatttagaggctcggctctgggaatgaaaagtggtcagtaataaaatcaaaac 31881416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 523
Target Start/End: Complemental strand, 22875039 - 22875003
Alignment:
Q  487 caatgttctatttatattttttaaaagataaatacaa 523  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  22875039 caatattctatttaaattttttaaaagataaatacaa 22875003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 480 - 520
Target Start/End: Original strand, 35080766 - 35080806
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaata 520  Q
    |||||| ||||||| |||||| |||||||||||||||||||    
T  35080766 aaaagaacaatgttttatttaaattttttaaaagataaata 35080806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 3e-68; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 398 - 589
Target Start/End: Original strand, 54619120 - 54619311
Alignment:
Q  398 tcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctat 497  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||        ||||||||||||||||||    
T  54619120 tcagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaagccaatgataaaatcaaaacataattttttttaaaagagcaatgttctat 54619219  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  54619220 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 54619311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 398 - 589
Target Start/End: Original strand, 38681010 - 38681201
Alignment:
Q  398 tcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctat 497  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        ||||||||||||||||||    
T  38681010 tcagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctat 38681109  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||||||| | ||||||||||||||||||||||||  ||||||| |||||||    
T  38681110 ttatattttttaaaagataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaaaccccacc 38681201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 36715942 - 36716133
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctat 497  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||         ||||||||||||||||||    
T  36715942 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaataaaaacataatttttatttaaaagagcaatgttctat 36716041  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||| ||| |||||||| |||||| |||||||||    
T  36716042 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaacgaccaccgtatacgtgagggacccccacc 36716133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 21582960 - 21582769
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctat 497  Q
    ||||| |||| |||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||| ||          |||||| ||||||| |||    
T  21582960 cagggccgtccctgagaattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagaacaatgttttat 21582861  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  21582860 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 21582769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 47467872 - 47467682
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| |||||||||||||||||||||||||| |||||||||||| || ||||||||||||||| |           ||||||| ||||||||||    
T  47467872 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtgttttttttttaaagagcgatgttctatt 47467773  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||||| ||| ||||||||||| |||||| ||||||||||||||||||||||||  |||||||||||||||    
T  47467772 tatattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 47467682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 398 - 585
Target Start/End: Original strand, 8073256 - 8073442
Alignment:
Q  398 tcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctat 497  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||         ||||||| ||||||||||    
T  8073256 tcagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgta-ttttttttaaaagagtaatgttctat 8073354  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccc 585  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||||||| | | ||||||||||||||||||||  |||||||||||    
T  8073355 ttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccc 8073442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 399 - 585
Target Start/End: Original strand, 27078486 - 27078673
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctat 497  Q
    ||||| |||| ||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||         |||| |||||||||||||    
T  27078486 cagggccgtccctgagaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaacataatttttttttaaaaaagcaatgttctat 27078585  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccc 585  Q
    ||||||||||||||||||||||||||  ||| |||||||||||||| ||| ||||||||||||||||||||||||  |||| ||||||    
T  27078586 ttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacccc 27078673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 399 - 585
Target Start/End: Original strand, 27084283 - 27084470
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctat 497  Q
    ||||| |||| ||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||         |||| |||||||||||||    
T  27084283 cagggccgtccctgagaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaacataatttttttttaaaaaagcaatgttctat 27084382  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccc 585  Q
    ||||||||||||||||||||||||||  ||| |||||||||||||| ||| ||||||||||||||||||||||||  |||| ||||||    
T  27084383 ttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacccc 27084470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 413 - 589
Target Start/End: Original strand, 34290568 - 34290744
Alignment:
Q  413 agaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaa 512  Q
    ||||||||||||||||||||||| |||||||||| | || ||||||||||||||| ||         |||| | ||||||||||||||||||||||||||    
T  34290568 agaattcggaggctcggctctgggaatgaaaagaagtcagtgataaaatcaaaacgtatttttttttaaaaaaacaatgttctatttatattttttaaaa 34290667  T
Q  513 gataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||| ||| ||| |||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||    
T  34290668 gataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacc 34290744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 400 - 589
Target Start/End: Original strand, 3953816 - 3954004
Alignment:
Q  400 agggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 499  Q
    |||| |||| ||||||||||||||| || ||||||||||||||||||||||| ||||||||| ||||  ||         |||||| |||||||||||||    
T  3953816 agggccgtccctgagaattcggaggttccgctctggaaatgaaaagaggccagtgataaaattaaaatgta-ttttttttaaaagaacaatgttctattt 3953914  T
Q  500 atattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||  ||||||||  |||||||||||||||    
T  3953915 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgaggaacccccacc 3954004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 398 - 585
Target Start/End: Complemental strand, 42098990 - 42098803
Alignment:
Q  398 tcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctat 497  Q
    |||||| |||| ||||||||||| |||||| |||| |||||||||||||||||| ||||||||||||||  |          |||||||| |||||||||    
T  42098990 tcagggccgtccctgagaattcgaaggctcagctcgggaaatgaaaagaggccagtgataaaatcaaaatgtctttttttttaaaagagcgatgttctat 42098891  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccc 585  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||| ||  ||||||||||||||||||||||||  |||||||||||    
T  42098890 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatgaggaacccc 42098803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 43207157 - 43207345
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| || |||||| |||||||||||||||| ||||||||||||||| ||||||| | ||||| ||         |||||||||||||||||||    
T  43207157 cagggccgtccctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaattaaaaacgta-ttttttttaaaagagcaatgttctatt 43207255  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||| ||| ||||||||||||||||||||||  |||||||||||||||    
T  43207256 tatattttttaaaagataaatataaggtgccgtatatatgcggtacatcaa-aggtgaaaatgactaccgtatacatgaggaacccccacc 43207345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 413 - 589
Target Start/End: Complemental strand, 37168541 - 37168365
Alignment:
Q  413 agaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaa 512  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||         |||| | ||||||||||||||||||||||||||    
T  37168541 agaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaaaaacaatgttctatttatattttttaaaa 37168442  T
Q  513 gataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||| ||| ||| ||||||||| |||| ||| | ||||||||||||||||||||||  |||||||| ||||||    
T  37168441 gataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgaggaactcccacc 37168365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 413 - 589
Target Start/End: Complemental strand, 44708650 - 44708475
Alignment:
Q  413 agaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaa 512  Q
    |||||||||||||||  |||||| ||||||||||||||| ||||||||||||||| ||         |||| || |||||||||||||||||||||||||    
T  44708650 agaattcggaggctcaactctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaa-agaaatgttctatttatattttttaaaa 44708552  T
Q  513 gataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||| ||| ||| |||||||| ||||||||| | ||||||||||||||||||||||  |||||||||||||||    
T  44708551 gataaatataaggtgccgtatatatccggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 44708475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 405 - 589
Target Start/End: Original strand, 53149238 - 53149422
Alignment:
Q  405 cgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatt 504  Q
    |||| |||||||||||||||||| | || || ||||||||||| ||| ||||||||||||||| |          |||||||| ||||||||||||||||    
T  53149238 cgtctctgagaattcggaggctcagttcggggaatgaaaagagaccagtgataaaatcaaaacgtttttttttttaaaagagcgatgttctatttatatt 53149337  T
Q  505 ttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||| ||| |||||||||||||||||  |||| | |||||||||||||||||  |||||||||||||||    
T  53149338 ttttaaaagataaatacaaggtgccgtatatatgcggtacactcagagataaaaatgactaccgtatacatgaggaacccccacc 53149422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 413 - 589
Target Start/End: Original strand, 53506815 - 53506992
Alignment:
Q  413 agaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctatttatattttttaaa 511  Q
    |||||||| |||||||||||||| |||||| |||||||| ||||||||||||||||||          |||| | |||||||||||||||||||||||||    
T  53506815 agaattcgaaggctcggctctgggaatgaagagaggccagtgataaaatcaaaacatattttttttttaaaaaaacaatgttctatttatattttttaaa 53506914  T
Q  512 agataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||| ||| | | |||||||||||||||||| | ||||||||||||||||||||||  |||| ||||||||||    
T  53506915 agataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc 53506992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 405 - 572
Target Start/End: Complemental strand, 36606146 - 36605980
Alignment:
Q  405 cgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatt 504  Q
    |||| |||| |||||||||| ||||||||||||||||||||||| || ||||||||||||||| ||         || ||||||||||||||||||||||    
T  36606146 cgtccctgaaaattcggaggttcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgta-ttttttttaatagagcaatgttctatttatatt 36606048  T
Q  505 ttttaaaa-gataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    |||||||| |||||||||||| ||| |||||||||||||||||| |||| ||||||| |||||||||||    
T  36606047 ttttaaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaat-actaccgtata 36605980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 411 - 587
Target Start/End: Complemental strand, 18372658 - 18372479
Alignment:
Q  411 tgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaa 510  Q
    |||||||||||||||||| | |||| |||||||||||| || ||||||||||||||| ||         |||||||||||||||||||||||||||||||    
T  18372658 tgagaattcggaggctcgacactgggaatgaaaagaggtcagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctatttatattttttaa 18372560  T
Q  511 aagataaatacaagatgctgtatatat----gcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaaccccca 587  Q
    |||||||||||||| ||  ||||||||    |||||||||  ||||||||||||||||||||||||  ||||||| |||||    
T  18372559 aagataaatacaaggtgtcgtatatatgcgcgcggtacacacagaggtgaaaatgactaccgtatacatgaggaatcccca 18372479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 399 - 586
Target Start/End: Original strand, 50939152 - 50939338
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| || ||||||||| ||||||||||||  ||||||||||||||| ||||||||||||||| ||         |||| ||||||| ||||||    
T  50939152 cagggccgtccctaagaattcgggggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaa-agcaatgatctatt 50939250  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaaccccc 586  Q
    |||||||||||||||||||||| ||| ||| ||||||||  |||||||| | |||| |||||||||||||||||  ||||||||||||    
T  50939251 tatattttttaaaagataaatataaggtgccgtatatatatggtacacccaaaggtaaaaatgactaccgtatacatgaggaaccccc 50939338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 410 - 588
Target Start/End: Original strand, 50258553 - 50258731
Alignment:
Q  410 ctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatttttta 509  Q
    |||||||||||||||||||||||||| || ||||||||  || ||||||||||||||||||         |||||||| |||||||||||||||||||||    
T  50258553 ctgagaattcggaggctcggctctgggaacgaaaagagatcagtgataaaatcaaaacata-tttttttaaaaagagcgatgttctatttatatttttta 50258651  T
Q  510 aaagataaatacaagatgctgtatatatgcggtacaccaaga-ggtgaaaatgactaccgtatatgtgaggaacccccac 588  Q
    ||| ||||||||||| ||  ||||||||||||||||||  || ||||||||||||||  ||||   ||||||||||||||    
T  50258652 aaaaataaatacaaggtgtcgtatatatgcggtacacccggagggtgaaaatgactattgtatgcatgaggaacccccac 50258731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 399 - 572
Target Start/End: Original strand, 54407073 - 54407249
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagag---caatgttct 495  Q
    ||||| |||| || ||||||||||||||||||||||| ||||||||||||||  ||||||||||||||| |          |||| |    |||||||||    
T  54407073 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacgtttttttttttaaaaaaaaaacaatgttct 54407172  T
Q  496 atttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    ||||||||||||||||||||||||| ||| ||| |||||||||||||||| | | ||||||||||||||||||||||    
T  54407173 atttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtata 54407249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 480 - 587
Target Start/End: Original strand, 9878686 - 9878793
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||| | ||||||||||||||| ||||||  | |||    
T  9878686 aaaagagcaatattctatttatattttttaaaagataaatataaggtgcagtatatatgcggtacacccaaaggtgaaaatgactatcgtatacataagg 9878785  T
Q  580 aaccccca 587  Q
    ||||||||    
T  9878786 aaccccca 9878793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 488 - 583
Target Start/End: Original strand, 32319162 - 32319257
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    ||||||||||||| ||||||||||||||||||||||  || ||||||||||||||||||| | |||||||||| |||| | |||||  ||||||||    
T  32319162 aatgttctatttaaattttttaaaagataaatacaaagtgttgtatatatgcggtacacccaaaggtgaaaattactatcttatatacgaggaacc 32319257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 488 - 583
Target Start/End: Complemental strand, 8420425 - 8420330
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    ||||||||||||| ||||||||||||||||||||||| ||| |||||||||  ||||||| | | |||||||| ||| ||||||||  ||||||||    
T  8420425 aatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttgtacacccaaatgtgaaaatcactgccgtatatacgaggaacc 8420330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 516 - 589
Target Start/End: Original strand, 29620423 - 29620496
Alignment:
Q  516 aaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||| ||| |||||||||||||| | | ||||||||||||||||||||||||  |||||||||||||||    
T  29620423 aaatacaaggtgccgtatatatgcggtatatccagaggtgaaaatgactaccgtatacatgaggaacccccacc 29620496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 413 - 588
Target Start/End: Complemental strand, 48157302 - 48157138
Alignment:
Q  413 agaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaa 512  Q
    ||||||||||||||||| || || ||| ||||||||||| ||||||||||||||||  |        ||||  |||||| ||||||||||||||||||||    
T  48157302 agaattcggaggctcggttccgggaataaaaagaggccagtgataaaatcaaaaca-catttttaaaaaaaatgcaatgatctatttatattttttaaaa 48157204  T
Q  513 gataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccac 588  Q
    |||||||| ||| ||          |||||||||| | |||||||||||||||| |||||  ||||||||||||||    
T  48157203 gataaatataaggtg----------gcggtacacccaaaggtgaaaatgactactgtatacatgaggaacccccac 48157138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 480 - 583
Target Start/End: Original strand, 54574826 - 54574929
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||||| |||||||||||||| |||||| |||| ||||||||||| | | |||||||||||||||||| | | || ||||| |||||| ||||  |||||    
T  54574826 aaaagaacaatgttctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgagg 54574925  T
Q  580 aacc 583  Q
    ||||    
T  54574926 aacc 54574929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 399 - 461
Target Start/End: Original strand, 29620364 - 29620426
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaat 461  Q
    ||||| |||| |||||||||||||||||||||||||| |||||||||||| || |||||||||    
T  29620364 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaat 29620426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 480 - 566
Target Start/End: Complemental strand, 26279649 - 26279563
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactac 566  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||| ||  ||||||||||  |||||| | || ||||||| |||||    
T  26279649 aaaagaacaatgttctatttaaattttttaaaagataaatagaaggtgtcgtatatatgcaatacacccaaagatgaaaatcactac 26279563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 23641329 - 23641382
Alignment:
Q  492 ttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtaca 545  Q
    ||||||||||||||||||||||||||||||||  ||  ||||||||||||||||    
T  23641329 ttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtaca 23641382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 488 - 572
Target Start/End: Original strand, 28689368 - 28689452
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    ||||||||||||| |||||  |||||||||||||||| ||| ||||||||||| || | | | |||||||||| ||| |||||||    
T  28689368 aatgttctatttaaattttcaaaaagataaatacaaggtgccgtatatatgcgatatatccaaaggtgaaaatcactgccgtata 28689452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 480 - 556
Target Start/End: Complemental strand, 42453511 - 42453435
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtga 556  Q
    |||||| |||||||| ||||| ||||||||||||||||||||||| ||   |||||||||| |||||| | ||||||    
T  42453511 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 42453435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 467
Target Start/End: Original strand, 48720429 - 48720497
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaac 467  Q
    ||||| |||| || |||||| |||||||||||||||| ||||||||||||  | |||||||||||||||    
T  48720429 cagggccgtccctaagaattgggaggctcggctctgggaatgaaaagaggtaagtgataaaatcaaaac 48720497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 481 - 572
Target Start/End: Complemental strand, 25855527 - 25855437
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    ||||| |||||||||||||| |||||||||||||| |||||||| ||  |||||||||  || |||| | || ||||||| |||||||||||    
T  25855527 aaagaacaatgttctatttaaattttttaaaagat-aatacaaggtgtcgtatatatgtagtgcacccaaagttgaaaatcactaccgtata 25855437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 481 - 572
Target Start/End: Complemental strand, 49393195 - 49393105
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    ||||| ||||||||| |||| |||||||||||||||||||||||  |  |||||||||  ||||||| | |||| ||||| |||||||||||    
T  49393195 aaagaacaatgttctctttaaattttttaaaagataaatacaaggcgtcgtatatatg-tgtacacccaaaggtaaaaattactaccgtata 49393105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 2e-60; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 18776683 - 18776873
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||        |||||||||||||||||||    
T  18776683 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaatataattttttttaaaagagcaatgttctatt 18776782  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| ||| ||||||||||||||||||||  |||| ||||||||||    
T  18776783 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatgagaaacccccacc 18776873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 29077404 - 29077215
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| |||||||||||||||||||||||||| |||||||||||| || ||||||||||||||| ||         |||||||||||||||||||    
T  29077404 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctatt 29077306  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  29077305 tatattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgaggaacccccacc 29077215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 405 - 589
Target Start/End: Original strand, 8171463 - 8171646
Alignment:
Q  405 cgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatt 504  Q
    |||| |||||||||||||||||||||||||| |||||||||||| || ||||||||||||| | ||         |||||||||||||||||||||||||    
T  8171463 cgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaagcgta-ttttttttaaaagagcaatgttctatttatatt 8171561  T
Q  505 ttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||||||||  |||||||||||||||    
T  8171562 ttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacc 8171646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 12596207 - 12596394
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |           ||||||| ||||||||||    
T  12596207 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgt---ttttttttaaagagcgatgttctatt 12596303  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||| ||||||||||||||| ||| ||||||||| |||||||| |||||||||||||||||||||||   |||||||||||||||    
T  12596304 tatatttttttaaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgaggaacccccacc 12596394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 395 - 589
Target Start/End: Original strand, 23550984 - 23551178
Alignment:
Q  395 taatcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttc 494  Q
    |||||||||||||| || ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||         |||| ||||||| ||    
T  23550984 taatcagggtcgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacatatttttttaaaaaa-agcaatgatc 23551082  T
Q  495 tatttatatttt-ttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||| |||||||||||||| ||| ||  |||||||||||||||| | | ||||||||||||||||||||||  |||||||||||||||    
T  23551083 tatttatatttttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 23551178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 410 - 562
Target Start/End: Complemental strand, 26254167 - 26254015
Alignment:
Q  410 ctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatttttta 509  Q
    |||||||||||||||||||||| ||| |||||||||||| || ||||||||||||||||||         ||||||||||||||||||||||||||||||    
T  26254167 ctgagaattcggaggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaacatatttttttttaaaagagcaatgttctatttatatttttta 26254068  T
Q  510 aaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatga 562  Q
    ||||||||||||||| ||| |||||||||||||||||| | || |||||||||    
T  26254067 aaagataaatacaaggtgccgtatatatgcggtacacccaaagatgaaaatga 26254015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 413 - 588
Target Start/End: Original strand, 10329341 - 10329516
Alignment:
Q  413 agaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaa 512  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||         |||| ||||||||||||||||||||||||||||    
T  10329341 agaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaagcaatgttctatttatattttttaaaa 10329440  T
Q  513 gataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccac 588  Q
    |||||||| ||| ||| ||||||||| || | ||| | ||||||||||||||||||||||  |||| |||||||||    
T  10329441 gataaatataaggtgccgtatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgagaaacccccac 10329516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 20091197 - 20091388
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagag-caatgttctat 497  Q
    ||||| |||| || ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||| ||         |||| |  ||||| |||||    
T  20091197 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaaaaaacaatgatctat 20091296  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||| | ||||||||||||||||||||||  |||||||||||||||    
T  20091297 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 20091388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 387 - 584
Target Start/End: Complemental strand, 19692291 - 19692094
Alignment:
Q  387 atataatttaatcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagag 486  Q
    ||||||| ||| ||||| | || || |||||||||| |||||||||||||||||||||| | ||| ||||||||||||||| ||         |||||||    
T  19692291 atataatataaccagggccctccctaagaattcggaagctcggctctggaaatgaaaagtgtccagtgataaaatcaaaacgtatttttttttaaaagag 19692192  T
Q  487 caatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaaccc 584  Q
    |||||||||||||||||||||||||||||||||| ||| |||  ||||||||||||||||| | ||||||||||||||  ||||||  ||||||||||    
T  19692191 caatgttctatttatattttttaaaagataaatataaggtgccatatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgaggaaccc 19692094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 38414793 - 38414983
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    |||||||||| || |||||||||||||||| |||||||||||||||||| | | | ||||||||||||| ||         |||||||||| ||||||||    
T  38414793 cagggtcgtccctaagaattcggaggctcgactctggaaatgaaaagagactagtcataaaatcaaaacgtatttttttgcaaaagagcaacgttctatt 38414892  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    | |||||||||||||||||||| ||| ||  ||||||||| |||||||| | |||||||||||||||| |||||  |||||||||||||||    
T  38414893 tgtattttttaaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgaggaacccccacc 38414983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 399 - 572
Target Start/End: Complemental strand, 28749895 - 28749722
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctat 497  Q
    ||||| |||| |||| ||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||          ||||||||||| ||||||    
T  28749895 cagggccgtccctgaaaattcggaggctcggctctgggaatgaaaagagaccaatgataaaatcaaaacatatttttttttcaaaagagcaatattctat 28749796  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    |||||||||| |||||||||||||||| ||| |||||||||||||||||  ||| |||||||| |||||||||||    
T  28749795 ttatatttttgaaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaat-actaccgtata 28749722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 480 - 589
Target Start/End: Complemental strand, 10955588 - 10955479
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||||||| |||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||  ||||||||||||||||||||||||  |||||    
T  10955588 aaaagagcgatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgagg 10955489  T
Q  580 aacccccacc 589  Q
    ||||||||||    
T  10955488 aacccccacc 10955479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 413 - 585
Target Start/End: Complemental strand, 8239857 - 8239686
Alignment:
Q  413 agaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaa 512  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||| ||||| ||         ||||||| |||||||||||||||||||||||||    
T  8239857 agaatttggaggctcggctctggaaatgaaaagaggccaatgataaaatgaaaacgta-ttttttttaaaagagtaatgttctatttatattttttaaaa 8239759  T
Q  513 gataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccc 585  Q
     ||||||| ||  ||| ||||||||| |||||||| | | |||||||||| |||||||||| |||||||||||    
T  8239758 aataaatataatgtgccgtatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgaggaacccc 8239686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 24525599 - 24525792
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaa---aagagcaatgttct 495  Q
    |||||||||| || ||||||||||||||||||||||| ||||||||||||||  ||||||||||||||| ||              || | |||||||||    
T  24525599 cagggtcgtccctaagaattcggaggctcggctctgggaatgaaaagaggcctgtgataaaatcaaaacgtattttttttttttttaaaaacaatgttct 24525698  T
Q  496 atttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||| ||| ||| || ||||||||||||||| | | ||||||||||||||||||||  |||||||||||||||    
T  24525699 atttatattttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccacc 24525792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 48983756 - 48983951
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn-----aaaagagcaatgtt 493  Q
    ||||| |||| || ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||| ||              |||| | ||||| |    
T  48983756 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaacgtatttttttttttttaaaaaaaacaatgat 48983855  T
Q  494 ctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||||| ||| ||  |||||||||||||||||| | |||||||||| |||||||||||  |||||||||||||||    
T  48983856 ctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgaggaacccccacc 48983951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 47984885 - 47985077
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctat 497  Q
    ||||| |||| || ||||||||  ||||||||||||| |||||||||| |||| ||||||||||||||| |           |||| |||||||||||||    
T  47984885 cagggccgtccctaagaattcgttggctcggctctgggaatgaaaagatgccagtgataaaatcaaaacgtgttttttttttaaaaaagcaatgttctat 47984984  T
Q  498 ttatatttt-ttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||| |||||||| ||||| ||| ||| |||||||||||||||||| | ||||||||||||| ||||||||  |||||||||||||||    
T  47984985 ttatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatgaggaacccccacc 47985077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 481 - 561
Target Start/End: Original strand, 33162338 - 33162418
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatg 561  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||| | |||||||||||    
T  33162338 aaagagcaatgctctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatg 33162418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 25010611 - 25010428
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacata-annnnnnnnaaaagagcaatgttctat 497  Q
    ||||| |||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||          |||| ||||||| |||||    
T  25010611 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacgtattttttaaaaaaaaaagcaatgatctat 25010512  T
Q  498 ttata--ttttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||  |||||||||||||||||| ||| ||          |||||||||| | ||||||||||||||||||||||  |||||||||||||||    
T  25010511 ttatattttttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 25010428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 481 - 572
Target Start/End: Original strand, 9021799 - 9021890
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    ||||| |||| | ||||||| ||||||||||||||||||||||  ||| |||||||||||||||||| | |||||||||| |||||||||||    
T  9021799 aaagaacaatttgctatttaaattttttaaaagataaatacaatgtgccgtatatatgcggtacacccaaaggtgaaaatcactaccgtata 9021890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 481 - 573
Target Start/End: Original strand, 6765680 - 6765772
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatat 573  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| ||  ||||||| || ||||| | | |||||||||| ||||||||||||    
T  6765680 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatataagccgtacatccaaaggtgaaaatcactaccgtatat 6765772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 480 - 572
Target Start/End: Complemental strand, 23744900 - 23744808
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    |||||| |||||||||| ||| ||||||||||||||||||||||| ||| | |||||||||||||||| | || | ||||| |||||||||||    
T  23744900 aaaagaacaatgttctaattaaattttttaaaagataaatacaaggtgccgcatatatgcggtacacctaaagataaaaatcactaccgtata 23744808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 480 - 583
Target Start/End: Original strand, 2611260 - 2611363
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| ||  |||||||||||||||||  |  ||||||||| || || |||||  |||||    
T  2611260 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacacaatggtgaaaatcacaactgtatacatgagg 2611359  T
Q  580 aacc 583  Q
    ||||    
T  2611360 aacc 2611363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 480 - 583
Target Start/End: Complemental strand, 7398555 - 7398452
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||| |||  |||||||| | |||||| | |||||||||| |||||| ||||  |||||    
T  7398555 aaaagaacaatgttctatttaaattttttgaaagataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgagg 7398456  T
Q  580 aacc 583  Q
    ||||    
T  7398455 aacc 7398452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 488 - 583
Target Start/End: Complemental strand, 36891674 - 36891579
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    |||||||||||||||||||||||| ||| |||||||  || ||||||||| ||||||| | | |||||||||| |||||||||||  |||||||||    
T  36891674 aatgttctatttatattttttaaatgatgaatacaatgtgttgtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacc 36891579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 402 - 467
Target Start/End: Original strand, 40357300 - 40357365
Alignment:
Q  402 ggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaac 467  Q
    |||||||  |||||||||||||||||||||||||||||||||| ||| || |||||||||||||||    
T  40357300 ggtcgtccttgagaattcggaggctcggctctggaaatgaaaaaaggtcagtgataaaatcaaaac 40357365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 23859169 - 23859085
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    ||||||||||||| ||||||||||||||||||||||  | | ||||||||||| |||||| | || ||||||| |||||||||||    
T  23859169 aatgttctatttaaattttttaaaagataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtata 23859085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 488 - 583
Target Start/End: Complemental strand, 12981422 - 12981327
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    |||||||||||||  |||||||||||||||||||||| | |  |||||| |||||||||  | |||||||||| ||||| |||||| |||||||||    
T  12981422 aatgttctatttaatttttttaaaagataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgaggaacc 12981327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 480 - 583
Target Start/End: Original strand, 27237421 - 27237524
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| || |||||||||| | |  | | | |||||||||| |||| ||||||  |||||    
T  27237421 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatgtgatgaatctaaaggtgaaaatcactatcgtatacatgagg 27237520  T
Q  580 aacc 583  Q
    ||||    
T  27237521 aacc 27237524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 482 - 560
Target Start/End: Original strand, 36902924 - 36903002
Alignment:
Q  482 aagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaat 560  Q
    |||| |||||||||||||| ||||||||| ||||||||||||||||  |||||||||  ||||||| | ||||||||||    
T  36902924 aagaacaatgttctatttaaattttttaatagataaatacaagatgtcgtatatatgttgtacacctaaaggtgaaaat 36903002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 481 - 567
Target Start/End: Original strand, 21763586 - 21763672
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactacc 567  Q
    ||||| || ||||||||||| ||||||||||||||||||||||  |   ||||||||||| |||||||| | |||||||| ||||||    
T  21763586 aaagaacattgttctatttaaattttttaaaagataaatacaaagtatcgtatatatgcgatacaccaaaaagtgaaaatcactacc 21763672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 487 - 560
Target Start/End: Complemental strand, 18201234 - 18201161
Alignment:
Q  487 caatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaat 560  Q
    ||||| |||||||| ||||||||||| |||||||||||||||  |||||||| |||||||| |  |||||||||    
T  18201234 caatgatctatttaaattttttaaaatataaatacaagatgccatatatatgtggtacacctaagggtgaaaat 18201161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 20153297 - 20153213
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    |||||| |||||| ||||||||||||||||||||||  || |||||||||||| || ||| | || ||||||| ||| |||||||    
T  20153297 aatgttttatttaaattttttaaaagataaatacaaagtgttgtatatatgcgataaacccaaagatgaaaatcactgccgtata 20153213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 480 - 523
Target Start/End: Original strand, 12419493 - 12419536
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaa 523  Q
    |||||| |||||||||||||| ||||||||||||||||||||||    
T  12419493 aaaagaacaatgttctatttaaattttttaaaagataaatacaa 12419536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 530 - 569
Target Start/End: Original strand, 40357414 - 40357453
Alignment:
Q  530 gtatatatgcggtacaccaagaggtgaaaatgactaccgt 569  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  40357414 gtatatatgcggtacaccaagagatgaaaatgactaccgt 40357453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 481 - 537
Target Start/End: Original strand, 9014177 - 9014233
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatat 537  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||  || |||||||||    
T  9014177 aaagaacaatgttttatttaaattttttaaaagataaatacaatgtgttgtatatat 9014233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 2e-60; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 411 - 589
Target Start/End: Original strand, 38209520 - 38209698
Alignment:
Q  411 tgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaa 510  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||         ||||||||||||||||||||||||||||||    
T  38209520 tgagaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatataatttttttttaaagagcaatgttctatttatattttttaa 38209619  T
Q  511 aagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  38209620 aagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 38209698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 34768492 - 34768681
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    |||||||||| |||||||||||||||||||||| ||| ||||||||||||| | ||||||||||||||||||         |||||||||||||||||||    
T  34768492 cagggtcgtccctgagaattcggaggctcggctttgggaatgaaaagaggctagtgataaaatcaaaacata-ttttttttaaaagagcaatgttctatt 34768590  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  34768591 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccagaggtgaaaatgattaccgtatacatgaggaacccccacc 34768681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 405 - 589
Target Start/End: Complemental strand, 47129170 - 47128987
Alignment:
Q  405 cgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatt 504  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||         |||||| ||||||||||||||||||    
T  47129170 cgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatgta-ttttttttaaaagaacaatgttctatttatatt 47129072  T
Q  505 ttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||| ||| |||||||||||||||||| |||||| |||||||||||||||||  |||||||||||||||    
T  47129071 ttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacc 47128987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 54780968 - 54780777
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctat 497  Q
    ||||| |||| ||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||| ||          ||||||||||||||||||    
T  54780968 cagggccgtccctgagaattcggaggcttggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttctat 54780869  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||| | ||||||||||||||||||||||  |||||||||||||||    
T  54780868 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 54780777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 32915575 - 32915385
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||            |||||||| ||||||||||    
T  32915575 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacggttttttttttaaaagagcgatgttctatt 32915476  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||| |||||| ||||||| |||||||||  |||||||||||||||    
T  32915475 tatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatgaggaacccccacc 32915385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 413 - 589
Target Start/End: Original strand, 43455463 - 43455638
Alignment:
Q  413 agaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaa 512  Q
    |||||||||||||||| |||||| |||||||||||| || ||||||||||||||| ||         |||||||||||||||||||||||||||||||||    
T  43455463 agaattcggaggctcgactctgggaatgaaaagaggtcagtgataaaatcaaaacgta-ttatttttaaaagagcaatgttctatttatattttttaaaa 43455561  T
Q  513 gataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||| ||| ||| |||||||||||||||||| | ||||||||||||||||||||||  |||||||||||||||    
T  43455562 gataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 43455638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 2790659 - 2790848
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| || ||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||          |||||| ||||||||||||    
T  2790659 cagggccgtctctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacatt-ttttttttaaaagaacaatgttctatt 2790757  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||| ||| | | |||||||||||||||||| | ||||||||||||||||||||||  |||||||||||||||    
T  2790758 tatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 2790848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 34027768 - 34027579
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| || ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||         |||| ||||||||||||||    
T  34027768 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaa-agcaatgttctatt 34027670  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||| ||| ||  |||||||||||||||||| | |||||||||||||||| |||||  |||||||||||||||    
T  34027669 tatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactacggtatacatgaggaacccccacc 34027579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 415 - 584
Target Start/End: Original strand, 37777156 - 37777325
Alignment:
Q  415 aattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaaga 514  Q
    ||||||||||||||||||||| |||||||||||| || ||||||||||||||| ||         |||| || |||||||||||||||||||||||||||    
T  37777156 aattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttaaaaaaaaagtaatgttctatttatattttttaaaaga 37777255  T
Q  515 taaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaaccc 584  Q
    |||||| ||| ||| |||||||||||||||||| | ||||||||||||||||||||||  ||||||||||    
T  37777256 taaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccc 37777325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 32128774 - 32128584
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| || |||||| |||||||||||||||| |||||||| ||| || ||||||||||||||| ||         |||||||||||||||||||    
T  32128774 cagggccgtccctaagaatttggaggctcggctctgggaatgaaaaaaggtcagtgataaaatcaaaacgtatttttttttaaaagagcaatgttctatt 32128675  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||| ||| ||  |||||||||||||||||| | ||||||||||||||||||||||  | || ||||||||||    
T  32128674 tatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacataagaaacccccacc 32128584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 10979092 - 10978900
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn--aaaagagcaatgttcta 496  Q
    ||||| |||| ||||||||||||||| |  ||||||| ||||||||||||  | ||||||||||||||| ||           |||||||||||||||||    
T  10979092 cagggccgtctctgagaattcggaggtttagctctgggaatgaaaagaggttagtgataaaatcaaaacgtatttttttttttaaaagagcaatgttcta 10978993  T
Q  497 tttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||||||| ||  |||||||||||||||||| ||| ||||||||||||||||||||  |||||||||||||||    
T  10978992 tttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaagtgaaaatgactaccgtatacatgaggaacccccacc 10978900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 411 - 589
Target Start/End: Complemental strand, 1105709 - 1105532
Alignment:
Q  411 tgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaa 510  Q
    ||||||||| ||||||||||||||| |||||||||||| || ||||||||||||||| ||         |||||||  ||||||||||||||||||||||    
T  1105709 tgagaattcagaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgta-ttttttttaaaagagtgatgttctatttatattttttaa 1105611  T
Q  511 aagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||| |   |||||||||||||||||| ||||||||||||||||||| ||||  |||| ||||||||||    
T  1105610 aagataaatacaaggtatcgtatatatgcggtacacctagaggtgaaaatgactaccatatacatgagcaacccccacc 1105532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 399 - 557
Target Start/End: Complemental strand, 17679589 - 17679432
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| |||||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||| ||         ||||||||||| |||||||    
T  17679589 cagggccgtctctgagaattcggaggctcggttctgggaatgaaaagagaccagtgataaaatcaaaacgta-ttttttttaaaagagcaatattctatt 17679491  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaa 557  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  17679490 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 17679432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 399 - 524
Target Start/End: Complemental strand, 55255447 - 55255322
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||        ||||||||||||||| |||    
T  55255447 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttccatt 55255348  T
Q  499 tatattttttaaaagataaatacaag 524  Q
    ||||||||||||||||||||||||||    
T  55255347 tatattttttaaaagataaatacaag 55255322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 398 - 589
Target Start/End: Complemental strand, 19498692 - 19498504
Alignment:
Q  398 tcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctat 497  Q
    |||||| |||| || ||||||||||||||||||||| | |||||||| |||||| ||||||||||||||| ||         ||||||||||||||||||    
T  19498692 tcagggccgtcactaagaattcggaggctcggctctaggaatgaaaacaggccaatgataaaatcaaaacgta-ttttgtttaaaagagcaatgttctat 19498594  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||| ||| ||| |  ||||||||||||| | | |||||||||||||||| |||||  |||||||||||||||    
T  19498593 ttatattttttaaaagataaatataaggtgccg--tatatgcggtacagccaaaggtgaaaatgactactgtatacatgaggaacccccacc 19498504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 48209436 - 48209240
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaa-----atcaaaacataannnnnnnn-aaaagagcaatgt 492  Q
    ||||| |||| |||||||||||||||||||||||||| | ||||||||| ||| |||||||     |||||||| ||          |||||||||||||    
T  48209436 cagggccgtccctgagaattcggaggctcggctctgggagtgaaaagagaccagtgataaattaaaatcaaaacgtattttttttttaaaagagcaatgt 48209337  T
Q  493 tctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||| ||||| ||||||||||||||  |||| ||||||||||    
T  48209336 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaatatgactaccgtatacatgagaaacccccacc 48209240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 5128758 - 5128949
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatc-aaaacataannnnnnnnaaaagagcaatgttctat 497  Q
    ||||| |||| |||||||||  ||||||||||||||| ||||||||||||||| |||||||||| ||||| |          | |||||| || ||||||    
T  5128758 cagggccgtccctgagaatttagaggctcggctctgggaatgaaaagaggccagtgataaaatctaaaacgtttttttttttagaagagcgatattctat 5128857  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||||| ||| |||||||||| || |||| ||||||||||||||||||||||||  ||||||||| |||||    
T  5128858 ttatattttttaaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgaggaacctccacc 5128949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 16845210 - 16845021
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| || |||||||||||||||||||||||||||||||| || ||| ||||||||||||||| ||         |||||||||||||||||||    
T  16845210 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaaaag-ccagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctatt 16845113  T
Q  499 tatatttttt-aaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||| |||||||||||| ||| ||  |||||||||  ||||||| |  |||||||||||||||||||||  |||||||||||||||    
T  16845112 tatatttttttaaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacatgaggaacccccacc 16845021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 397 - 589
Target Start/End: Complemental strand, 35465297 - 35465107
Alignment:
Q  397 atcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttcta 496  Q
    ||||||||| |  |||||||||||||||||||  ||||| |||||||||||| || ||||||||||||||||||         |||||| ||||||| ||    
T  35465297 atcagggtcctttctgagaattcggaggctcgattctgggaatgaaaagaggtcagtgataaaatcaaaacata-ttttttttaaaagaacaatgttata 35465199  T
Q  497 tttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||| |||||||||| ||| ||| |||||||||||||||||| | | |||||||| |||||||||||  ||||||| |||||||    
T  35465198 tttatattttttacaagataaataaaaggtgc-gtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgaggaatccccacc 35465107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 37514848 - 37514659
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacata-annnnnnnnaaaagagcaatgttctat 497  Q
    ||||| |||| ||||||||| |||||||| ||   || ||||||||||||||| ||||||||||||||| ||           ||||||| |||||||||    
T  37514848 cagggccgtccctgagaatttggaggctcagcg--gggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttttaaagagcgatgttctat 37514751  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||  ||||||||||||||||||||||||  ||| ||| |||||||    
T  37514750 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaagaatccccacc 37514659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 412 - 558
Target Start/End: Original strand, 10428129 - 10428273
Alignment:
Q  412 gagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaa 511  Q
    |||||||||||||||||||||||| |||||||||||| || || |||||||||||  ||         |||||  |||||||||||||||||||||||||    
T  10428129 gagaattcggaggctcggctctgggaatgaaaagaggtcagtgctaaaatcaaaatttattttttttaaaaag--caatgttctatttatattttttaaa 10428226  T
Q  512 agataaatacaagatgctgtatatatgcggtacaccaagaggtgaaa 558  Q
    ||||||||||||| ||| |||||||||||||||||| ||||||||||    
T  10428227 agataaatacaaggtgccgtatatatgcggtacacccagaggtgaaa 10428273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 16882313 - 16882502
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| || ||||||||||||||||||||| | |||||||||| | || ||||||||||||||| ||         |||| | ||||||||||||    
T  16882313 cagggccgtccctaagaattcggaggctcggctctaggaatgaaaagaagtcagtgataaaatcaaaacgtatttttttaaaaaaaa-caatgttctatt 16882411  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||| ||||||||||||||||| ||| ||| || ||||| ||||||||||| ||||||||||||||||||||| | || ||||||| ||||    
T  16882412 tatactttttaaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtgaaaatgactaccgtatgtatggggaaccctcacc 16882502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 415 - 585
Target Start/End: Original strand, 54083176 - 54083345
Alignment:
Q  415 aattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaaga 514  Q
    ||||||||||||||||||||  |||||||||||| || ||||||||||||||| ||         |||| | ||||| ||||||||||||||||||||||    
T  54083176 aattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaaaa-caatgatctatttatattttttaaaaga 54083274  T
Q  515 taaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccc 585  Q
    |||||| ||| ||| |||||||||||||||||| | || | |||||||||||||||||  |||||||||||    
T  54083275 taaatataaggtgccgtatatatgcggtacacccaaagataaaaatgactaccgtatacatgaggaacccc 54083345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 415 - 561
Target Start/End: Complemental strand, 51964884 - 51964736
Alignment:
Q  415 aattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatttttt---aaa 511  Q
    ||||||||| ||||||||||| ||||||||||||||  ||||||||||||||| ||         |||||||||||||||||||||||||||||   |||    
T  51964884 aattcggagactcggctctgggaatgaaaagaggccgatgataaaatcaaaacgta-ttttttttaaaagagcaatgttctatttatattttttttaaaa 51964786  T
Q  512 agataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatg 561  Q
    ||||||||||||| ||| ||||||||||| |||||| |||||||||||||    
T  51964785 agataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatg 51964736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 411 - 583
Target Start/End: Original strand, 35779257 - 35779426
Alignment:
Q  411 tgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaa 510  Q
    |||||||||||||| ||| |||  | ||||||||||||| | ||||||||||||||| ||          |||||||||||||||||| |||||||||||    
T  35779257 tgagaattcggaggttcgactcgaggaatgaaaagaggctagtgataaaatcaaaacgtatttttttt--aaagagcaatgttctatt-atattttttaa 35779353  T
Q  511 aagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    |||||||||||||| ||  |||||||||||||||||| | |||||||||||| |||||||||  |||||||||    
T  35779354 aagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacc 35779426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 490 - 589
Target Start/End: Complemental strand, 13460306 - 13460207
Alignment:
Q  490 tgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||||||||||||| ||  |||||||||||||| ||| ||| ||||||||||||||||||||  | |||||||||||||    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacataaggaacccccacc 13460207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 40089714 - 40089516
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    |||||||||| || ||||||||||||||||||||| | |||||||||| | || ||||||||||||||| ||         |||| ||||||||| ||||    
T  40089714 cagggtcgtccctaagaattcggaggctcggctcttggaatgaaaagaagtcagtgataaaatcaaaacgtattttttttaaaaa-agcaatgttttatt 40089616  T
Q  499 tatattt---------tttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||         ||||||||||||||| ||| ||| |||||||||||||||| | | ||||||||||||||||||||||  |||||||||||||||    
T  40089615 tatatttatttatatttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 40089516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 480 - 549
Target Start/End: Original strand, 51691913 - 51691982
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaa 549  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  51691913 aaaagagcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgcggtacaccaa 51691982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 413 - 589
Target Start/End: Original strand, 38352197 - 38352362
Alignment:
Q  413 agaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaa 512  Q
    ||||||||||||||||||||||| |||||||||||  || ||||||||||||||| ||         |||| || |||| ||||||||||||||||||||    
T  38352197 agaattcggaggctcggctctgggaatgaaaagagatcagtgataaaatcaaaacgtatttttttttaaaa-agtaatgatctatttatattttttaaaa 38352295  T
Q  513 gataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||| ||| ||          |||||||||| | ||||||||||||||||||| ||  |||||||||||||||    
T  38352296 gataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtgtacatgaggaacccccacc 38352362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 399 - 562
Target Start/End: Original strand, 16922245 - 16922409
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctat 497  Q
    ||||| |||| ||||||||| ||||||||| || ||| ||||||||||| ||| ||||||||||||||| |           ||||||||||||||||||    
T  16922245 cagggccgtccctgagaatttggaggctcgactttgggaatgaaaagagaccagtgataaaatcaaaacgttttttatttttaaaagagcaatgttctat 16922344  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatga 562  Q
    ||||||||||||||||||||||| ||  ||  |||||||||| |||  || | ||||||||||||    
T  16922345 ttatattttttaaaagataaatataaagtgtcgtatatatgcagtatccccaaaggtgaaaatga 16922409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 487 - 583
Target Start/End: Complemental strand, 27112132 - 27112036
Alignment:
Q  487 caatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    |||||||| ||||| ||||||||||||||||||||||| ||   |||||||||| |||||||| | |||||||| |||||||||||  |||||||||    
T  27112132 caatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 27112036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 390 - 524
Target Start/End: Original strand, 23508418 - 23508553
Alignment:
Q  390 taatttaatcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaa 489  Q
    |||| ||||||||  ||||  ||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||  ||          || ||||||    
T  23508418 taatctaatcaggaccgtccatgaaaattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaaatgtattttttttttaatgagcaa 23508517  T
Q  490 tgttctatttat-attttttaaaagataaatacaag 524  Q
    |||||||||||| |||||||||||||||||||||||    
T  23508518 tgttctatttataattttttaaaagataaatacaag 23508553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 480 - 571
Target Start/End: Complemental strand, 52468395 - 52468304
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtat 571  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| ||| |||||||||   |||| | | |||||||||| ||||||||||    
T  52468395 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtat 52468304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 501 - 583
Target Start/End: Original strand, 4167910 - 4167992
Alignment:
Q  501 tattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    |||||||||||||||||||||||| ||| ||||||||||| |||||| | |||||||||| |||||| ||||  |||||||||    
T  4167910 tattttttaaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaacc 4167992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 480 - 545
Target Start/End: Original strand, 9578662 - 9578728
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagat-gctgtatatatgcggtaca 545  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||  |||||||||||||||    
T  9578662 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtagccatatatatgcggtaca 9578728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 480 - 560
Target Start/End: Original strand, 39655252 - 39655332
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaat 560  Q
    |||||| |||||||||||||| ||||||||||||||||||||||  | | | |||||||||||||||| | ||||||||||    
T  39655252 aaaagaacaatgttctatttaaattttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtgaaaat 39655332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 530 - 589
Target Start/End: Original strand, 23509846 - 23509905
Alignment:
Q  530 gtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||| |||||||||||||||||||||| |  |||||||||||||||    
T  23509846 gtatatatgcggtacacctagaggtgaaaatgactaccgtagacatgaggaacccccacc 23509905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 480 - 589
Target Start/End: Complemental strand, 24969536 - 24969437
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||| ||||||| |||||||||||||||||||||||||||| ||| ||          |||||||||| | ||||||||||||||||||||||  |||||    
T  24969536 aaaaaagcaatgatctatttatattttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtatacatgagg 24969447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 487 - 572
Target Start/End: Original strand, 36118463 - 36118548
Alignment:
Q  487 caatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    |||||||||||||| ||||||||||||||||||||||| ||  ||||||||| | |||||| | |  ||||||| |||||||||||    
T  36118463 caatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtata 36118548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 487 - 572
Target Start/End: Complemental strand, 36178774 - 36178689
Alignment:
Q  487 caatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    |||||||||||||| ||| ||||||||||||||||||| ||  ||||||||||| |||||| | | |||||||| |||||| ||||    
T  36178774 caatgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttata 36178689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 487 - 583
Target Start/End: Original strand, 2135326 - 2135422
Alignment:
Q  487 caatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    |||| ||||||||| ||||||||||||||||||||||| ||  ||||||||||| |||| | | |||| || || |||| ||||||| |||||||||    
T  2135326 caatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacatccaaaggtaaacatcactatcgtatatatgaggaacc 2135422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 480 - 572
Target Start/End: Original strand, 10041998 - 10042090
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    |||||| |||||||||||||| |||||| |||| ||||||||||| ||| |||| |||| | |||||| | | |||||||| |||||||||||    
T  10041998 aaaagaacaatgttctatttaaatttttaaaaaaataaatacaaggtgccgtatgtatgtgatacacctaaatgtgaaaatcactaccgtata 10042090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 480 - 560
Target Start/End: Original strand, 39329390 - 39329470
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaat 560  Q
    |||||| ||||||||| |||| ||||||||||||||||||||||| || |||||||||| | |||||| | || |||||||    
T  39329390 aaaagaacaatgttctctttaaattttttaaaagataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaat 39329470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 480 - 583
Target Start/End: Complemental strand, 24397043 - 24396940
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||||| |||| || |||||| ||||||||||||||||||| ||| ||| ||||||||| | |||||  | |||||||||| |||| ||||||  |||||    
T  24397043 aaaagaacaatattttatttaaattttttaaaagataaatataaggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgagg 24396944  T
Q  580 aacc 583  Q
    ||||    
T  24396943 aacc 24396940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 398 - 467
Target Start/End: Complemental strand, 24969787 - 24969718
Alignment:
Q  398 tcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaac 467  Q
    |||||| |||| || |||||||||||||||| |||||| ||||||||||||| | |||||||| ||||||    
T  24969787 tcagggccgtccctaagaattcggaggctcgactctgggaatgaaaagaggctagtgataaaaacaaaac 24969718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 415 - 470
Target Start/End: Original strand, 2975358 - 2975413
Alignment:
Q  415 aattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacata 470  Q
    |||||| | ||||||||||| ||||||||||||| || ||||||||||||||||||    
T  2975358 aattcgaatgctcggctctgaaaatgaaaagaggtcaatgataaaatcaaaacata 2975413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 481 - 524
Target Start/End: Complemental strand, 24614061 - 24614018
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaag 524  Q
    ||||| |||||||||||||| |||||||||||||||||||||||    
T  24614061 aaagaacaatgttctatttaaattttttaaaagataaatacaag 24614018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 37744916 - 37745011
Alignment:
Q  489 atgttctatttatatttt-ttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    |||||||||||| ||||| |||||||||||||| ||| ||  | ||||||||| |||| | | |||||||||| |||||||||||  |||||||||    
T  37744916 atgttctatttaaatttttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgaggaacc 37745011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 30507120 - 30507162
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaataca 522  Q
    |||||| |||||||||||||| |||||||||||||||||||||    
T  30507120 aaaagaacaatgttctatttaaattttttaaaagataaataca 30507162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 544 - 589
Target Start/End: Complemental strand, 55255314 - 55255269
Alignment:
Q  544 caccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||    
T  55255314 cacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 55255269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 480 - 572
Target Start/End: Original strand, 36362869 - 36362961
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    |||||| ||||| ||| |||| ||||||||||||||||||||||  ||| ||||||||||  |||||| | | ||| |||| |||||| ||||    
T  36362869 aaaagaacaatgctctgtttaaattttttaaaagataaatacaaagtgccgtatatatgcaatacacccaaatgtggaaatcactaccatata 36362961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 525
Target Start/End: Complemental strand, 15735189 - 15735154
Alignment:
Q  490 tgttctatttatattttttaaaagataaatacaaga 525  Q
    ||||||||||| ||||||||||||||||||||||||    
T  15735189 tgttctatttaaattttttaaaagataaatacaaga 15735154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 449
Target Start/End: Original strand, 9578573 - 9578625
Alignment:
Q  397 atcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggc 449  Q
    ||||||| ||||  |||||||||||||||||| |||||| | |||||||||||    
T  9578573 atcagggccgtccttgagaattcggaggctcgactctgggagtgaaaagaggc 9578625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 2e-60; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 398 - 589
Target Start/End: Complemental strand, 44655937 - 44655747
Alignment:
Q  398 tcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctat 497  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||        ||||||||||||||||||    
T  44655937 tcagggccgtccctgagaattcggaggctcggctctggaaatgaaaagagaccagtgataaaatcaaaacataattttttt-aaaagagcaatgttctat 44655839  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||||||| |||||| |||||||||||||||||  |||||||||||||||    
T  44655838 ttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacc 44655747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 14146495 - 14146306
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| |||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| ||         |||||||| ||||||||||    
T  14146495 cagggccgtccctgagaattcggaggctcggctcttggaatgaaaagaggccagtgataaaatcaaaacgta-ttttttttaaaagagcgatgttctatt 14146397  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||||||||  |||||||||||||||    
T  14146396 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacc 14146306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 402 - 589
Target Start/End: Complemental strand, 16140247 - 16140061
Alignment:
Q  402 ggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttat 501  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||| ||         |||||||  |||||||||||||    
T  16140247 ggtcgtccctgagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacgta-ttttttttaaaagagtgatgttctatttat 16140149  T
Q  502 attttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||  ||||||| |||||||    
T  16140148 attttttaaaagataaatacaaggtgttgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaatccccacc 16140061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 5027746 - 5027555
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctat 497  Q
    ||||| |||| ||||||||||||||||||| ||| || ||||||||||||||| ||||||||||||||| ||          ||||||||||||||||||    
T  5027746 cagggccgtccctgagaattcggaggctcgactcggggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttctat 5027647  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||| | ||||||||||||||||| ||||  |||||||||||||||    
T  5027646 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatgaggaacccccacc 5027555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 410 - 589
Target Start/End: Complemental strand, 23185611 - 23185433
Alignment:
Q  410 ctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatttttta 509  Q
    |||||||||||||||||||||||  | | ||||||||||||| ||||||||||||||| ||         ||||||||||||||||||||||||||||||    
T  23185611 ctgagaattcggaggctcggctcgaggattgaaaagaggccagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctatttatatttttta 23185513  T
Q  510 aaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||| ||| |||||||||||||||||| | ||||||||||||||||||||||  |||||||||||||||    
T  23185512 aaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacc 23185433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 405 - 589
Target Start/End: Complemental strand, 50881618 - 50881436
Alignment:
Q  405 cgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatt 504  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||  ||         |||||||||||||||||||||||||    
T  50881618 cgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaattaaaatcta--tttttttaaaagagcaatgttctatttatatt 50881521  T
Q  505 ttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||| ||  |||||||||||||||| | |||||||||||||||||| |||||  ||||||||| |||||    
T  50881520 ttttaaaagataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatgaggaacctccacc 50881436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 398 - 585
Target Start/End: Complemental strand, 17169152 - 17168966
Alignment:
Q  398 tcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctat 497  Q
    |||||| |||| || |||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||         |||| |||||||||||||    
T  17169152 tcagggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaa-agcaatgttctat 17169054  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccc 585  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||| | ||||||||||||||||| ||||  |||||||||||    
T  17169053 ttatattttttaaaagataaatataaggtgttgtatatatgcggtacacccaaaggtgaaaatgactaccatatacatgaggaacccc 17168966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 5316875 - 5316686
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| ||||||||| ||||||||| |  | | |||||||||||| || ||||||||||||||| ||         |||||||||||||||||||    
T  5316875 cagggccgtccctgagaatttggaggctcgaccttaggaatgaaaagaggtcagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctatt 5316777  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  5316776 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 5316686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 6771989 - 6771797
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnna--aaagagcaatgttcta 496  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |             ||||||| ||||||||    
T  6771989 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtgttttttttttttaaagagcgatgttcta 6771890  T
Q  497 tttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||   |||||||| |||||    
T  6771889 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacacgaggaacctccacc 6771797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 396 - 589
Target Start/End: Original strand, 4971533 - 4971725
Alignment:
Q  396 aatcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttct 495  Q
    ||||||||  ||| |||||||||| ||||||||| || || ||||||||||| ||| ||||||||||||||||||         ||| ||||||||||||    
T  4971533 aatcagggctgtccctgagaattctgaggctcggttcggggaatgaaaagagaccagtgataaaatcaaaacatatttttttttaaa-gagcaatgttct 4971631  T
Q  496 atttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||||||| | | |||||||||||||||||| | | ||||||||||||||||||||  |||||||||||||||    
T  4971632 atttatattttttaaaagataaatacaaggtaccgtatatatgcggtacacccataagtgaaaatgactaccgtatacatgaggaacccccacc 4971725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 413 - 589
Target Start/End: Complemental strand, 19955898 - 19955723
Alignment:
Q  413 agaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaa 512  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||||||||||||  |         |||| ||||||| ||||||||||||||||||||    
T  19955898 agaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgaatttttttttaaaa-agcaatgatctatttatattttttaaaa 19955800  T
Q  513 gataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||| ||| | | |||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||    
T  19955799 gataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacc 19955723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 399 - 560
Target Start/End: Original strand, 22865378 - 22865538
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| |||||||||||||||| ||||||||| |||||||||||| || ||||||||||||||| ||         |||||||||||||||||||    
T  22865378 cagggccgtccctgagaattcggaggcacggctctgggaatgaaaagaggtcaatgataaaatcaaaacgtattttttttcaaaagagcaatgttctatt 22865477  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaat 560  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||| | ||||||||||    
T  22865478 tatattttttaaaagataaatacaagatgctctatatat-cggtacacccaaaggtgaaaat 22865538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 27906646 - 27906824
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||        ||||||||||||||| |||    
T  27906646 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttccatt 27906745  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||||| ||| |             |||| ||||||||||||||||||||||||  |||||||||||||||    
T  27906746 tatattttttaaaagataaatacaaggtgccgc------------cacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 27906824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 411 - 572
Target Start/End: Original strand, 21740864 - 21741027
Alignment:
Q  411 tgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn--aaaagagcaatgttctatttatatttttt 508  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||  ||           |||||||||||||||||||| ||||||||    
T  21740864 tgagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaatgtatttttttttttaaaagagcaatgttctatttgtatttttt 21740963  T
Q  509 aaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    |||||||||||||||| ||| ||||||||||| |||||| ||||||||||||||||||| ||||    
T  21740964 aaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccatata 21741027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 410 - 589
Target Start/End: Complemental strand, 3406603 - 3406424
Alignment:
Q  410 ctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatttttta 509  Q
    ||||||||| |||||||| |||| || |||||||||||| || ||||||||| ||||| |          |||||||| |||||||||||||||||||||    
T  3406603 ctgagaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacgtttttttttttaaaagagcgatgttctatttatatttttta 3406504  T
Q  510 aaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||| ||| |||||||||| ||||||   |||||||||||||||||||||||  |||||||||||||||    
T  3406503 aaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacccccacc 3406424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 410 - 589
Target Start/End: Original strand, 3440217 - 3440396
Alignment:
Q  410 ctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatttttta 509  Q
    ||||||||| |||||||| |||| || |||||||||||| || ||||||||| ||||| |          |||||||| |||||||||||||||||||||    
T  3440217 ctgagaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacgtttttttttttaaaagagcgatgttctatttatatttttta 3440316  T
Q  510 aaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||| ||| |||||||||| ||||||   |||||||||||||||||||||||  |||||||||||||||    
T  3440317 aaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacccccacc 3440396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 9172940 - 9173130
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| || ||||||||||||||||||||||| ||||||||||||||  ||||||| | ||||  ||          ||| | ||||||||||||    
T  9172940 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaattaaaaatgtatttttgttttaaaaaacaatgttctatt 9173039  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||| | | ||||||||||||||||||||||  |||||||||||||||    
T  9173040 tatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 9173130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 9180922 - 9181112
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| || ||||||||||||||||||||||| ||||||||||||||  ||||||| | ||||  ||          ||| | ||||||||||||    
T  9180922 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaattaaaaatgtatttttgttttaaaaaacaatgttctatt 9181021  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||| | | ||||||||||||||||||||||  |||||||||||||||    
T  9181022 tatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 9181112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 414 - 589
Target Start/End: Original strand, 1366812 - 1366985
Alignment:
Q  414 gaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaag 513  Q
    ||||| |||||||| ||||||| ||||||||||||||| ||||||| | ||||||||         ||  ||||||||||||||||||||||||||||||    
T  1366812 gaatttggaggctcagctctgggaatgaaaagaggccagtgataaattgaaaacatatttttttttaa--gagcaatgttctatttatattttttaaaag 1366909  T
Q  514 ataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||| ||| ||| |||||||||||||||||| | || |||||||||||||||||||   ||||||||||||||    
T  1366910 ataaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtatacacgaggaacccccacc 1366985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 480 - 589
Target Start/End: Complemental strand, 27559752 - 27559643
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||| |||||||||||||||||||||||||||||||||||| ||| ||  |||||||||||||||||| | ||||||||||||||||||||||  |||||    
T  27559752 aaaaaagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 27559653  T
Q  580 aacccccacc 589  Q
    ||||||||||    
T  27559652 aacccccacc 27559643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 392 - 589
Target Start/End: Original strand, 40501700 - 40501897
Alignment:
Q  392 atttaatcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatg 491  Q
    |||| ||||||| |||| || |||||||||||||||| |||||  |||||||||||| || ||||||||||||||| ||         |||| || ||||    
T  40501700 attttatcagggccgtccctaagaattcggaggctcgactctgagaatgaaaagaggtcagtgataaaatcaaaacgtattttttaaaaaaaaagtaatg 40501799  T
Q  492 ttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
     |||||||||||||||||||||||||||| ||| ||  |||||||||||||||||| | |||| |||||||||||||||||  ||| ||||| |||||    
T  40501800 atctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaagaacctccacc 40501897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 416 - 589
Target Start/End: Original strand, 41697072 - 41697244
Alignment:
Q  416 attcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaagat 515  Q
    ||||||| |||||||||||| |||||||||||| || ||||||||||||||| ||         |||||||| |||||||||||||||||||||||||||    
T  41697072 attcggaagctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgta-ttttttttaaaagagcgatgttctatttatattttttaaaagat 41697170  T
Q  516 aaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||  |   |||||||||| ||||| | ||| ||||||||||||||||||||  |||||||||||||||    
T  41697171 aaatacaaagtatcgtatatatgcagtacatccagaagtgaaaatgactaccgtatacatgaggaacccccacc 41697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 415 - 573
Target Start/End: Complemental strand, 6889789 - 6889633
Alignment:
Q  415 aattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaaga 514  Q
    ||||||||||||||| ||||  |||||||||||| || ||||||||||||||| ||         |||||||||||||||||||||||||||||||||||    
T  6889789 aattcggaggctcggttctgagaatgaaaagaggtcagtgataaaatcaaaacgta--tttttttaaaagagcaatgttctatttatattttttaaaaga 6889692  T
Q  515 taaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatat 573  Q
    |||||||||  |   |||||||||||||||| | |||||||||||||| | ||||||||    
T  6889691 taaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatgattgccgtatat 6889633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 415 - 573
Target Start/End: Complemental strand, 6891635 - 6891479
Alignment:
Q  415 aattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaaga 514  Q
    ||||||||||||||| ||||  |||||||||||| || ||||||||||||||| ||         |||||||||||||||||||||||||||||||||||    
T  6891635 aattcggaggctcggttctgagaatgaaaagaggtcagtgataaaatcaaaacgta--tttttttaaaagagcaatgttctatttatattttttaaaaga 6891538  T
Q  515 taaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatat 573  Q
    |||||||||  |   |||||||||||||||| | |||||||||||||| | ||||||||    
T  6891537 taaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatgattgccgtatat 6891479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 415 - 587
Target Start/End: Original strand, 51607374 - 51607545
Alignment:
Q  415 aattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaaga 514  Q
    ||||||||||||||||||||| |||||||||||| || ||||||||||||||| ||         |||| |  |||||| ||||||||||||||||||||    
T  51607374 aattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaaaa--aatgttttatttatattttttaaaaga 51607471  T
Q  515 taaatacaagatg-ctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaaccccca 587  Q
    |||||| ||| || | |||||||||||||||||| | | ||||||||||||||||||||  |||||||| ||||    
T  51607472 taaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgaggaactccca 51607545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 395 - 589
Target Start/End: Original strand, 13913394 - 13913589
Alignment:
Q  395 taatcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttc 494  Q
    |||||| || |||| || |||||||||||||| |||||||  |||||||||| |||| ||||||||||||||  ||         |||| ||||||| ||    
T  13913394 taatcaaggccgtccctaagaattcggaggcttggctctgagaatgaaaagatgccagtgataaaatcaaaatgtattttttttaaaaa-agcaatgatc 13913492  T
Q  495 tatttatattttttaaaagataaatacaagatgctg--tatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||||| ||| ||| |  ||||||||||||||||| | | ||||||||||||||||||||  |||| ||||||||||    
T  13913493 tatttatattttttaaaagataaatataagttgccgggtatatatgcggtacacctaaaagtgaaaatgactaccgtatacatgagaaacccccacc 13913589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 481 - 583
Target Start/End: Original strand, 38547035 - 38547137
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagga 580  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| ||| ||||||||| |||||||| | | |||||||| |||| | ||||  ||||||    
T  38547035 aaagatcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgagga 38547134  T
Q  581 acc 583  Q
    |||    
T  38547135 acc 38547137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 480 - 583
Target Start/End: Original strand, 39134720 - 39134824
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaa-gataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgag 578  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||| ||||||||||||||  |||||| | |||||| ||| ||||| |||||  ||||    
T  39134720 aaaagaacaatgttctatttaaattttttaaaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacatgag 39134819  T
Q  579 gaacc 583  Q
    |||||    
T  39134820 gaacc 39134824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 480 - 583
Target Start/End: Complemental strand, 45758609 - 45758506
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||||| |||||||||||||| |||||||||||||||||| |||| || ||||||||||   |||| | | |||||||||| |||||||||||  |||||    
T  45758609 aaaagaacaatgttctatttaaattttttaaaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgagg 45758510  T
Q  580 aacc 583  Q
    ||||    
T  45758509 aacc 45758506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 487 - 572
Target Start/End: Complemental strand, 33170867 - 33170782
Alignment:
Q  487 caatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    ||||||| |||||| |||||||||||  |||||||||  || |||||||||||||||||||||  ||||||||| |||||||||||    
T  33170867 caatgttatatttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtata 33170782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 402 - 467
Target Start/End: Complemental strand, 34247219 - 34247154
Alignment:
Q  402 ggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaac 467  Q
    |||||||  |||||||||||||||||||||||||||||||||| ||| || |||||||||||||||    
T  34247219 ggtcgtccttgagaattcggaggctcggctctggaaatgaaaaaaggtcagtgataaaatcaaaac 34247154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 481 - 583
Target Start/End: Complemental strand, 6221791 - 6221690
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagga 580  Q
    ||||| |||||||||||||| |||||| |||||||||||||||  ||| ||||||| |||||||| ||| | |||||||| | || ||||||| ||||||    
T  6221791 aaagaacaatgttctatttaaattttt-aaaagataaatacaatgtgccgtatataagcggtacatcaaaatgtgaaaatcattatcgtatatatgagga 6221693  T
Q  581 acc 583  Q
    |||    
T  6221692 acc 6221690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 481 - 572
Target Start/End: Complemental strand, 26804059 - 26803971
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    ||||| ||||| | |||||| ||||||||||||||||||||||||||  ||||||||||| |||||    |||||||||| |||||||||||    
T  26804059 aaagaacaatgctatatttaaattttttaaaagataaatacaagatgtcgtatatatgcgatacac---aaggtgaaaatcactaccgtata 26803971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 488 - 583
Target Start/End: Original strand, 43235774 - 43235871
Alignment:
Q  488 aatgttctatttatatttttta--aaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    ||||||||||||| |||||||   ||||||||||||||||||  |||||||||  ||||||| | |||||||||| |||| ||||||  |||||||||    
T  43235774 aatgttctatttaaatttttttttaaagataaatacaagatgtcgtatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaacc 43235871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 480 - 572
Target Start/End: Complemental strand, 38853637 - 38853545
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    |||||| || ||||||||||| |||||||||| |||||||||||| ||  |||||||||  ||| | | | |||||||||| |||||||||||    
T  38853637 aaaagaacagtgttctatttaaattttttaaatgataaatacaaggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtata 38853545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 480 - 523
Target Start/End: Original strand, 17322621 - 17322664
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaa 523  Q
    |||||| |||||||||||||||||||||| ||||||||||||||    
T  17322621 aaaagaacaatgttctatttatatttttttaaagataaatacaa 17322664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 530 - 569
Target Start/End: Complemental strand, 34247105 - 34247066
Alignment:
Q  530 gtatatatgcggtacaccaagaggtgaaaatgactaccgt 569  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  34247105 gtatatatgcggtacaccaagagatgaaaatgactaccgt 34247066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 480 - 581
Target Start/End: Complemental strand, 5533428 - 5533326
Alignment:
Q  480 aaaagagcaatgttctatttatatttttt-aaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgag 578  Q
    |||||| |||| ||||||||| ||||||| |||||||||| ||||| ||| |||||||||  |||||   | |||||||||| |||||||||||  ||||    
T  5533428 aaaagaacaatattctatttaaatttttttaaaagataaacacaaggtgccgtatatatgatgtacaatcaaaggtgaaaatcactaccgtatacatgag 5533329  T
Q  579 gaa 581  Q
    |||    
T  5533328 gaa 5533326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 570
Target Start/End: Complemental strand, 35392376 - 35392295
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgta 570  Q
    |||||| |||||| |||||||||  |||||||||||| ||| |||||||||||||| | | | |||||||||| |||||||||    
T  35392376 aatgttttatttaaattttttaag-gataaatacaaggtgccgtatatatgcggtatatccaaaggtgaaaatcactaccgta 35392295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 589
Target Start/End: Complemental strand, 44895845 - 44895658
Alignment:
Q  397 atcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn-aaaagagcaatgttct 495  Q
    |||||||| ||| || | |||||||||| |||| ||||| |||||||||||| |  ||| ||||||||||||||          |||| | ||||| |||    
T  44895845 atcagggttgtctctaaaaattcggaggttcggttctgggaatgaaaagaggtcggtgaaaaaatcaaaacatattttttttttaaaaaaacaatgatct 44895746  T
Q  496 atttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||||| ||| ||  |  |      |||||||| | |||||||||||| |||||||||  |||||||||||||||    
T  44895745 atttatattttttaaaagataaatataaggtggcgggt------ggtacacccaaaggtgaaaatgattaccgtatacatgaggaacccccacc 44895658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 583
Target Start/End: Complemental strand, 50146476 - 50146308
Alignment:
Q  414 gaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaag 513  Q
    ||||||||||||||||||||| |||||||| ||| ||  ||||||||| |||| ||          |||||| |||||||||||||| | ||||| ||||    
T  50146476 gaattcggaggctcggctctgtaaatgaaacgagacccatgataaaat-aaaaaatgtacttttttaaaagaacaatgttctatttaaactttttgaaag 50146378  T
Q  514 ataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    |||||| |||| ||| || |||||| | || ||| | |||| ||||| | |||| ||||  |||||||||    
T  50146377 ataaatgcaaggtgccgtgtatatgtgatagacccaaaggtaaaaatcattaccctatacatgaggaacc 50146308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 6e-60; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 2952137 - 2952329
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn--aaaagagcaatgttcta 496  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||          |||||||||||||||||    
T  2952137 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaaagagcaatgttcta 2952236  T
Q  497 tttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||||||  ||| |||||||||||||||||| |||| |||||||||||||||||||  |||||||||||||||    
T  2952237 tttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacc 2952329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 405 - 589
Target Start/End: Complemental strand, 30883509 - 30883324
Alignment:
Q  405 cgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctatttatat 503  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||         ||||||||||||||||||||||||    
T  30883509 cgtccctgagaattcagaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagcaatgttctatttatat 30883410  T
Q  504 tttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||  ||| |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  30883409 tttttaaaagataaatacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 30883324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 399 - 589
Target Start/End: Original strand, 3048435 - 3048625
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        ||||||||||| | |||||    
T  3048435 cagggccgtctctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatatactatt 3048534  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||||||||   ||||||||| ||||    
T  3048535 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtatacacgaggaaccctcacc 3048625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 405 - 589
Target Start/End: Original strand, 13534612 - 13534794
Alignment:
Q  405 cgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatt 504  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||         |||||||||||||||||||||||||    
T  13534612 cgtccctgaaaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctatttatatt 13534710  T
Q  505 ttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  13534711 ttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 13534794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 405 - 589
Target Start/End: Original strand, 13624152 - 13624334
Alignment:
Q  405 cgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatt 504  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||         |||||||||||||||||||||||||    
T  13624152 cgtccctgaaaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctatttatatt 13624250  T
Q  505 ttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  13624251 ttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 13624334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 410 - 589
Target Start/End: Complemental strand, 45475990 - 45475812
Alignment:
Q  410 ctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatttttta 509  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||| ||         ||||||||||||||||||||||||||||||    
T  45475990 ctgagaattcggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctatttatatttttta 45475892  T
Q  510 aaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||| ||| |||||||||||||||||| | ||||||||||||||||||||||  |||||||||||||||    
T  45475891 aaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacc 45475812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 395 - 589
Target Start/End: Original strand, 23606544 - 23606737
Alignment:
Q  395 taatcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttc 494  Q
    ||||||||| |||| || ||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| ||         |||||||||||||||    
T  23606544 taatcagggccgtccctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttc 23606642  T
Q  495 tatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||||| ||| ||| |||||||||||||||||| | |||| |||||||||||||||||  |||||||||||||||    
T  23606643 tatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaggaacccccacc 23606737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 399 - 584
Target Start/End: Original strand, 37430076 - 37430261
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |          |||||||| ||||||||||    
T  37430076 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtttttttttttaaaagagcgatgttctatt 37430175  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaaccc 584  Q
    |||||||||||||||||||||||||| ||| ||||||||||| |||||| |||||| |||||||||||||||||  ||||||||||    
T  37430176 tatattttttaaaagataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgaggaaccc 37430261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 410 - 585
Target Start/End: Original strand, 5860671 - 5860848
Alignment:
Q  410 ctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnna--aaagagcaatgttctatttatattttt 507  Q
    ||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||           |||||||||||||||||||||||||||    
T  5860671 ctgagaatttggaggctcggctctggaaatgaaaagaggtcaatgataaaatcaaaacataatatttatttttaaagagcaatgttctatttatattttt 5860770  T
Q  508 taaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccc 585  Q
    ||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| ||||  |||| ||||||    
T  5860771 taaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaaacccc 5860848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 398 - 589
Target Start/End: Original strand, 23798178 - 23798369
Alignment:
Q  398 tcagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctat 497  Q
    |||||| |||| || ||||||||||||||||||||||| || ||||||||| || ||||||||||||||| ||          |||||||||||||||||    
T  23798178 tcagggccgtccctaagaattcggaggctcggctctgggaacgaaaagaggtcaatgataaaatcaaaacgtatattttttttaaagagcaatgttctat 23798277  T
Q  498 ttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||| | | ||||||||||||||||||||  |||||||||||||||    
T  23798278 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccacc 23798369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 42600967 - 42600777
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| || |||||||||||||||||||||| ||||||||||||| || ||||||||||||||| |          |||| ||||||| ||||||    
T  42600967 cagggccgtccctaagaattcggaggctcggctctgaaaatgaaaagaggtcagtgataaaatcaaaacgtttttttttttaaaaaagcaatgatctatt 42600868  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||| ||| ||| ||||||||| |||||||| | ||||||||||||||||||||||  |||||||||||||||    
T  42600867 tatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 42600777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 413 - 589
Target Start/End: Complemental strand, 10917561 - 10917386
Alignment:
Q  413 agaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaa 512  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||| ||         |||| | ||||| ||||||||||||||||||||    
T  10917561 agaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaa-caatgatctatttatattttttaaaa 10917463  T
Q  513 gataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||| ||| ||| |||||||||||||||||| | ||||||||||||||||| ||||  |||||||||||||||    
T  10917462 gataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccttatacatgaggaacccccacc 10917386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 41879364 - 41879176
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| ||||||||||| |||||||||||||| ||||||||||||  | ||||||||| ||||| ||         |||||| ||||||||||||    
T  41879364 cagggccgtccctgagaattcgaaggctcggctctgggaatgaaaagaggttagtgataaaattaaaacgta--tttttttaaaagaacaatgttctatt 41879267  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||||| | | |||||||||||||||| | | |||||||||||||||||| |||  |||| ||||||||||    
T  41879266 tatattttttaaaagataaatacaaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgagaaacccccacc 41879176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 488 - 583
Target Start/End: Complemental strand, 8103008 - 8102913
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    |||||| |||||| ||||||||||||||||||||||| ||| |||||||||||||||||| | |||||||||| | |||||||||  |||||||||    
T  8103008 aatgttatatttaaattttttaaaagataaatacaaggtgcagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaacc 8102913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 480 - 583
Target Start/End: Original strand, 7944521 - 7944624
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||||| ||||||| |||||| ||||||||||| ||||||||||| ||| |||||||||  ||||||| | |||||||||| |||||||||||  |||||    
T  7944521 aaaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgagg 7944620  T
Q  580 aacc 583  Q
    ||||    
T  7944621 aacc 7944624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 414 - 583
Target Start/End: Original strand, 41677106 - 41677276
Alignment:
Q  414 gaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatttt-ttaaaa 512  Q
    |||||||||||||||||||||  | ||||||||| ||  | ||||||| ||||| ||         |||||| |||||||||||||| ||||| ||||||    
T  41677106 gaattcggaggctcggctctgtgagtgaaaagagacctataataaaataaaaacgtatttttttttaaaagaacaatgttctatttaaatttttttaaaa 41677205  T
Q  513 gataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    |||||||||||||||  ||||||||||| |||| | | |||||||||| ||||| |||||  |||||||||    
T  41677206 gataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgaggaacc 41677276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 503 - 583
Target Start/End: Complemental strand, 5942777 - 5942697
Alignment:
Q  503 ttttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    |||||||||||||||||||||||||  |||||| ||||||||||| | |||||||||| |||||||||||  |||||||||    
T  5942777 ttttttaaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacc 5942697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 480 - 583
Target Start/End: Original strand, 15167414 - 15167517
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||  || |||||||||||| |||||| | | |||||||| |||| ||||||  |||||    
T  15167414 aaaagaacaatgttctatttaaattttttaaaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 15167513  T
Q  580 aacc 583  Q
    ||||    
T  15167514 aacc 15167517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 480 - 572
Target Start/End: Original strand, 5973106 - 5973198
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| ||  |||||||||  ||||||| | || ||||||| | |||||||||    
T  5973106 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacacccatagatgaaaatcattaccgtata 5973198  T

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Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 480 - 572
Target Start/End: Complemental strand, 11290288 - 11290196
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    |||||| ||||||| |||||| ||||||||||||||||||||||| ||  |||||||||  ||||||  | |||||||||| |||||||||||    
T  11290288 aaaagaacaatgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtata 11290196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 399 - 467
Target Start/End: Original strand, 20003728 - 20003796
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaac 467  Q
    ||||| |||| ||||||||| ||||||||||||| || ||||||||||||||| |||||||||||||||    
T  20003728 cagggccgtccctgagaatttggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaac 20003796  T

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Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 480 - 572
Target Start/End: Original strand, 34789861 - 34789953
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    |||||| | |||||||||||| || | |||||||||||||||||||||  |||||||||  ||||||| | |||||||||| |||||||||||    
T  34789861 aaaagaacgatgttctatttaaatctcttaaaagataaatacaagatgtcgtatatatgttgtacacccaaaggtgaaaatcactaccgtata 34789953  T

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Target: chr8; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 488 - 583
Target Start/End: Complemental strand, 15078854 - 15078759
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    ||||||||||||| | ||||||||||||||||| ||| ||||||||||||||  |||||| | | |||||||| |||| ||||||  |||||||||    
T  15078854 aatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 15078759  T

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Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 5721654 - 5721560
Alignment:
Q  489 atgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    ||||||||||||  |||||||||||||||||||||| |||  ||||||  ||||||||| | | |||||||| |||||||||||  |||||||||    
T  5721654 atgttctatttaatttttttaaaagataaatacaaggtgccctatataatcggtacacccaaaagtgaaaatcactaccgtatacctgaggaacc 5721560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 481 - 583
Target Start/End: Original strand, 39332405 - 39332507
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagga 580  Q
    ||||| ||||||||||||||  ||||| |||||||||||||||| ||   |||||| |||||||| | | |||||||||| |||||||||||  ||||||    
T  39332405 aaagaacaatgttctatttaattttttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgagga 39332504  T
Q  581 acc 583  Q
    |||    
T  39332505 acc 39332507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 480 - 524
Target Start/End: Complemental strand, 8646309 - 8646265
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaag 524  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  8646309 aaaagaacaatgttctatttaaattttttaaaagataaatacaag 8646265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 481 - 524
Target Start/End: Complemental strand, 9108596 - 9108553
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaag 524  Q
    ||||| |||||||||||||| |||||||||||||||||||||||    
T  9108596 aaagaacaatgttctatttaaattttttaaaagataaatacaag 9108553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 481 - 560
Target Start/End: Original strand, 30674403 - 30674482
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaat 560  Q
    ||||| |||||||||||||| || |||||||||||||||| ||| ||  ||||||||||| |||||  | ||||||||||    
T  30674403 aaagaacaatgttctatttaaatgttttaaaagataaatataaggtgtcgtatatatgcgatacactcaaaggtgaaaat 30674482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 488 - 524
Target Start/End: Original strand, 34868184 - 34868220
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaag 524  Q
    ||||||||||||| |||||||||||||||||||||||    
T  34868184 aatgttctatttaaattttttaaaagataaatacaag 34868220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 583
Target Start/End: Original strand, 25561502 - 25561595
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    ||||||||||||| || ||||||| |||||||||||| ||| ||||||||||| || ||| | | |||||||| ||| |||||||  |||||||||    
T  25561502 aatgttctatttaaatcttttaaa-gataaatacaaggtgccgtatatatgcgata-acccaaatgtgaaaatcactgccgtatacatgaggaacc 25561595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 524
Target Start/End: Original strand, 23941097 - 23941134
Alignment:
Q  487 caatgttctatttatattttttaaaagataaatacaag 524  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  23941097 caatgttttatttaaattttttaaaagataaatacaag 23941134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 480 - 520
Target Start/End: Original strand, 38009151 - 38009191
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaata 520  Q
    |||||| |||||||||||||| | |||||||||||||||||    
T  38009151 aaaagaacaatgttctatttaaaatttttaaaagataaata 38009191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 1527 - 1338
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| |||||||||||||||||||||||||| |||||||||||| || ||||||||||||||| ||         ||||||||| |||||||||    
T  1527 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgta-ttttttttaaaagagcactgttctatt 1429  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||||||||  |||||||||||||||    
T  1428 tatattttttaaaagataaatacaagctgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacc 1338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 399 - 589
Target Start/End: Complemental strand, 106723 - 106533
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| || |||||| |||||||||||||||| ||||||||||||||| ||||||||||||||| ||         |||||| ||||||||||||    
T  106723 cagggccgtccctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaagaacaatgttctatt 106624  T
Q  499 tatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacccccacc 589  Q
    |||||||||||||||||||||| ||| ||  |||||||||||||||||| | ||||||||||||||||||||||  |||||||||||||||    
T  106623 tatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 106533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 480 - 572
Target Start/End: Original strand, 257 - 349
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtata 572  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| ||  |||||||||||||||||| | | |||||||| |||||||||||    
T  257 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtata 349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 487 - 583
Target Start/End: Original strand, 173516 - 173612
Alignment:
Q  487 caatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    |||||||||||||| ||||||||||||||||||||||| | | ||||||||||| |||||| | |||| ||||| ||||||||||| ||||||||||    
T  173516 caatgttctatttaaattttttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaacc 173612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 487 - 583
Target Start/End: Complemental strand, 39022 - 38926
Alignment:
Q  487 caatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    |||||||||||||| ||||||||||||||||||||||| ||  ||||||||||| |||||  | | |||||||| |||||||||||| |||||||||    
T  39022 caatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgaggaacc 38926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 399 - 523
Target Start/End: Complemental strand, 183244 - 183121
Alignment:
Q  399 cagggtcgtcgctgagaattcggaggctcggctctggaaatgaaaagaggccactgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatt 498  Q
    ||||| |||| |||| ||||| ||||||||||||||| ||||||||||||||| ||||||||| ||||| | |        |||||||  ||||||||||    
T  183244 cagggccgtccctgaaaattcagaggctcggctctgggaatgaaaagaggccagtgataaaattaaaacgt-attttttttaaaagagagatgttctatt 183146  T
Q  499 tatattttttaaaagataaatacaa 523  Q
    |||||||||||||||||||||||||    
T  183145 tatattttttaaaagataaatacaa 183121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 534 - 587
Target Start/End: Complemental strand, 181969 - 181916
Alignment:
Q  534 atatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaaccccca 587  Q
    |||||||||||| | ||||||||||||||||||||||||  |||||||||||||    
T  181969 atatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaaccccca 181916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 488 - 583
Target Start/End: Original strand, 206496 - 206591
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    ||||||||||||| ||||| ||||||||||||||||| ||  |||||||||||||||||| |  ||||||||| |||||||||||  |||||||||    
T  206496 aatgttctatttaaattttgtaaaagataaatacaaggtgtcgtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaacc 206591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 481 - 571
Target Start/End: Original strand, 23993 - 24083
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtat 571  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||| ||  |||||||||||||||||| | | |||||||| | ||||||||    
T  23993 aaagaacaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatcattaccgtat 24083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 488 - 583
Target Start/End: Complemental strand, 1450 - 1355
Alignment:
Q  488 aatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgaggaacc 583  Q
    ||||||||||||| | ||||||||||||||||| ||| ||||||||||||||  |||||| | | |||||||| |||| ||||||  |||||||||    
T  1450 aatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 1355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 480 - 582
Target Start/End: Original strand, 230858 - 230960
Alignment:
Q  480 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaatgactaccgtatatgtgagg 579  Q
    |||||| |||||||||||||| |||| |||||||||||||  ||| || |||||||||||| || ||| | |||||||||| |||||| ||||  |||||    
T  230858 aaaagaacaatgttctatttaaatttgttaaaagataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgagg 230957  T
Q  580 aac 582  Q
    |||    
T  230958 aac 230960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 481 - 524
Target Start/End: Complemental strand, 16168 - 16125
Alignment:
Q  481 aaagagcaatgttctatttatattttttaaaagataaatacaag 524  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  16168 aaagagaaatgttctatttaaattttttaaaagataaatacaag 16125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 560
Target Start/End: Complemental strand, 40191 - 40109
Alignment:
Q  480 aaaagagcaatgttctattta--tattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaat 560  Q
    |||||| ||||||||||||||  | |||||||||||||||||||||| ||| |||| ||||  |||||||   ||||||||||    
T  40191 aaaagaacaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaat 40109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 560
Target Start/End: Complemental strand, 138251 - 138169
Alignment:
Q  480 aaaagagcaatgttctattta--tattttttaaaagataaatacaagatgctgtatatatgcggtacaccaagaggtgaaaat 560  Q
    |||||| ||||||||||||||  | |||||||||||||||||||||| ||| |||| ||||  |||||||   ||||||||||    
T  138251 aaaagaacaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaat 138169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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