View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4445_high_118 (Length: 238)
Name: NF4445_high_118
Description: NF4445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4445_high_118 |
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Alignment Details
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 4946583 - 4946362
Alignment:
| Q |
1 |
ttctaatgaatttttatttacactcatgtcagagaatcttacatgaatatttcctattcagggatctcatgctggggtgctcgagcaagaggttctaaaa |
100 |
Q |
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| T |
4946583 |
ttctaatgaatttttatttacactcatgtcagagaatcttacatgaatatttcctattcagggatctcatgctggggtgctcgagcaagaggttcttaaa |
4946484 |
T |
|
| Q |
101 |
ctcaggaacgatttactcaaggtaggttttaattttctattttatatgcattctgcagacttagcaattaaatgaaatctattttatatcgttgttaatt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
4946483 |
ctcaggaacgatttactcaaggtaggttttaattttctattttatatgcattctgcagacttagcaattaaatgaaatctattttatattgttgttaatt |
4946384 |
T |
|
| Q |
201 |
atgtattcacattccactattt |
222 |
Q |
| |
|
|||||||||||||||||||||| |
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|
| T |
4946383 |
atgtattcacattccactattt |
4946362 |
T |
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