View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4445_high_122 (Length: 237)
Name: NF4445_high_122
Description: NF4445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4445_high_122 |
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Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 5414728 - 5414949
Alignment:
| Q |
1 |
catacctacaacaatttgcaacagcacaccaaaaatccttgtcaaaaacaaacaatctcgcgtggcttttcttatttttcattaaagtgacactaacgac |
100 |
Q |
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| T |
5414728 |
catacctgcaacaatttgcaacagcacaccacaaatccttgtcaaaaacaaacaatctcgcgtggcttttcttatttttaattaaagtgacactaacgac |
5414827 |
T |
|
| Q |
101 |
cattttactggcaaacacactttctatgaagctttatctcttgagcttcatagaaaggtagctatgcctatgaatgaaagtgagttaaactaaaatgaag |
200 |
Q |
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|||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
5414828 |
cattttactgacaaacacactttctatgaagctttgtctcttgagcttcatagaaaggtagctatgccaatgaatgaaagtgagttaaactaaaatgaag |
5414927 |
T |
|
| Q |
201 |
tattgtatgatgatgaacttac |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
5414928 |
tattgtatgatgatgaacttac |
5414949 |
T |
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