View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4445_high_17 (Length: 525)

Name: NF4445_high_17
Description: NF4445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4445_high_17
NF4445_high_17
[»] chr7 (9 HSPs)
chr7 (15-501)||(47958111-47958592)
chr7 (409-492)||(28556080-28556163)
chr7 (409-492)||(48253856-48253939)
chr7 (404-492)||(28545497-28545585)
chr7 (411-492)||(24142888-24142969)
chr7 (412-492)||(28549912-28549992)
chr7 (420-485)||(42617411-42617475)
chr7 (421-488)||(2415880-2415947)
chr7 (406-465)||(46961385-46961444)
[»] chr2 (1 HSPs)
chr2 (406-492)||(36011887-36011973)
[»] chr1 (7 HSPs)
chr1 (412-498)||(2736169-2736255)
chr1 (412-492)||(1076190-1076270)
chr1 (398-492)||(39959843-39959938)
chr1 (409-492)||(1093781-1093864)
chr1 (420-485)||(5298760-5298824)
chr1 (420-485)||(25948209-25948273)
chr1 (420-485)||(47490286-47490350)
[»] chr4 (8 HSPs)
chr4 (412-492)||(33075797-33075877)
chr4 (415-492)||(42678835-42678912)
chr4 (420-485)||(43930118-43930182)
chr4 (421-488)||(55899070-55899137)
chr4 (412-448)||(20144869-20144905)
chr4 (419-487)||(228865-228936)
chr4 (419-487)||(240410-240481)
chr4 (419-487)||(47819297-47819368)
[»] chr3 (4 HSPs)
chr3 (398-492)||(21127720-21127814)
chr3 (411-492)||(43291862-43291943)
chr3 (420-485)||(42085063-42085127)
chr3 (404-492)||(21126510-21126602)
[»] scaffold0648 (1 HSPs)
scaffold0648 (420-485)||(7753-7817)
[»] chr8 (1 HSPs)
chr8 (420-485)||(33802591-33802655)
[»] chr5 (3 HSPs)
chr5 (420-485)||(12974260-12974324)
chr5 (420-485)||(40579690-40579754)
chr5 (419-487)||(17537467-17537538)
[»] chr6 (1 HSPs)
chr6 (421-488)||(30809870-30809937)


Alignment Details
Target: chr7 (Bit Score: 442; Significance: 0; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 442; E-Value: 0
Query Start/End: Original strand, 15 - 501
Target Start/End: Original strand, 47958111 - 47958592
Alignment:
Q  15 atcatgttccgtttgaagtttgccaagtgaatttagagccaaatataggtaagtaagtggtctttgacttaaccaggttttgttttctgagagatttcat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  47958111 atcatgttccgtttgaagtttgccaagtgaatttagagccaaatataggtaagtaagtggtctttgacttaaccaagttttgttttctgagagatttcat 47958210  T
Q  115 ttactattttactttatactacacttctaaaaatacttttaatcaagtatcatccaaatatacgatattttgttagaaatatgtctgagaaaaattgctc 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47958211 ttactattttactttatactacacttctaaaaatacttttaatcaagtatcatccaaatatacgatattttgttagaaatatgtctgagaaaaattgctc 47958310  T
Q  215 aaacatataaatcacgtttgtgcaaacttgttttaatcaaacataattttgcaaactttgatccaaatgacctgaattggttacgttttgattgattcaa 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47958311 aaacatataaatcacgtttgtgcaaacttgttttaatcaaacataattttgcaaactttgatccaaatgacctgaattggttacgttttgattgattcaa 47958410  T
Q  315 ctataaatcaaatatggaactgtaattagtaccacttgttattaattttttgatcaaataaaagaaaatcacatttttacaggaaaaataaaagaaatgt 414  Q
    |||||||||||||||||||||||||||||||||||| ||||||||   | | | |||  |||||||||||||||||||||||||||||||||||||||||    
T  47958411 ctataaatcaaatatggaactgtaattagtaccactagttattaa---tgtaaacaa--aaaagaaaatcacatttttacaggaaaaataaaagaaatgt 47958505  T
Q  415 tgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaaccatgttatg 501  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47958506 tgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaaccatgttatg 47958592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 28556163 - 28556080
Alignment:
Q  409 aaatgttgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaac 492  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28556163 aaatgttgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaac 28556080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 48253939 - 48253856
Alignment:
Q  409 aaatgttgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaac 492  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48253939 aaatgttgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaac 48253856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 404 - 492
Target Start/End: Complemental strand, 28545585 - 28545497
Alignment:
Q  404 aaaagaaatgttgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaac 492  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28545585 aaaagaattgttgacagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatatcaac 28545497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 411 - 492
Target Start/End: Original strand, 24142888 - 24142969
Alignment:
Q  411 atgttgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaac 492  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24142888 atgttgagagtgggatttgaacccacaccctatcggaccagaaccttaatctggcgccttagaccaactcggccatctcaac 24142969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 412 - 492
Target Start/End: Complemental strand, 28549992 - 28549912
Alignment:
Q  412 tgttgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaac 492  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28549992 tgttgacagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatatcaac 28549912  T

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Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 420 - 485
Target Start/End: Original strand, 42617411 - 42617475
Alignment:
Q  420 gtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggcca 485  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  42617411 gtgggatttgaacccacgccctttcggaccagagcctaaatctggcgccttagacc-actcggcca 42617475  T

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Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 421 - 488
Target Start/End: Complemental strand, 2415947 - 2415880
Alignment:
Q  421 tgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatct 488  Q
    ||||||| ||||||| ||||||||||||||| |||| || ||||||||||||||||||||||||||||    
T  2415947 tgggattcgaacccatgccctttcggaccagtacctgaaactggcgccttagaccaactcggccatct 2415880  T

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Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 465
Target Start/End: Complemental strand, 46961444 - 46961385
Alignment:
Q  406 aagaaatgttgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggc 465  Q
    |||||| ||| || |||||||||||||||||||| |||| ||||||||||||||||||||    
T  46961444 aagaaaagtttagggtgggatttgaacccacgccttttcagaccagaaccttaatctggc 46961385  T

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Target: chr2 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 36011973 - 36011887
Alignment:
Q  406 aagaaatgttgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaac 492  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36011973 aagaaatgttgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaac 36011887  T

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Target: chr1 (Bit Score: 83; Significance: 4e-39; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 412 - 498
Target Start/End: Complemental strand, 2736255 - 2736169
Alignment:
Q  412 tgttgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaaccatgtt 498  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2736255 tgttgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaactatgtt 2736169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 412 - 492
Target Start/End: Complemental strand, 1076270 - 1076190
Alignment:
Q  412 tgttgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaac 492  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1076270 tgttgagagtgggatttgaacccacgccctttcggaccagaaccttaatctgacgccttagaccaactcggccatctcaac 1076190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 398 - 492
Target Start/End: Complemental strand, 39959938 - 39959843
Alignment:
Q  398 aaaaataaaagaa-atgttgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaac 492  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39959938 aaaaaaaaaagaatatgttgacagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatatcaac 39959843  T

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Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 1093864 - 1093781
Alignment:
Q  409 aaatgttgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaac 492  Q
    |||||||||||| ||||||||||||||| ||| ||  |||||||||||||||| ||||||||||||||||||||||||||||||    
T  1093864 aaatgttgagagcgggatttgaacccacacccatttagaccagaaccttaatcgggcgccttagaccaactcggccatctcaac 1093781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 420 - 485
Target Start/End: Complemental strand, 5298824 - 5298760
Alignment:
Q  420 gtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggcca 485  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  5298824 gtgggatttgaacccacgccctttcggaccagagcctaaatctggcgccttagacc-actcggcca 5298760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 420 - 485
Target Start/End: Complemental strand, 25948273 - 25948209
Alignment:
Q  420 gtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggcca 485  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  25948273 gtgggatttgaacccacgccctttcggaccagagcctaaatctggcgccttagacc-actcggcca 25948209  T

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Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 420 - 485
Target Start/End: Original strand, 47490286 - 47490350
Alignment:
Q  420 gtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggcca 485  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  47490286 gtgggatttgaacccacgccctttcggaccagagcctaaatctggcgccttagacc-actcggcca 47490350  T

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Target: chr4 (Bit Score: 81; Significance: 7e-38; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 412 - 492
Target Start/End: Complemental strand, 33075877 - 33075797
Alignment:
Q  412 tgttgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaac 492  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33075877 tgttgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaac 33075797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 415 - 492
Target Start/End: Original strand, 42678835 - 42678912
Alignment:
Q  415 tgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaac 492  Q
    |||||||| ||||||||  ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  42678835 tgagagtgtgatttgaattcacgccctttcggacgagaaccttaatctggcgccttagactaactcggccatctcaac 42678912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 420 - 485
Target Start/End: Original strand, 43930118 - 43930182
Alignment:
Q  420 gtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggcca 485  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  43930118 gtgggatttgaacccacgccctttcggaccagagcctaaatctggcgccttagacc-actcggcca 43930182  T

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Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 421 - 488
Target Start/End: Original strand, 55899070 - 55899137
Alignment:
Q  421 tgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatct 488  Q
    ||||||| ||||||| ||||||||||||||| |||| || ||||||||||||||||||||||||||||    
T  55899070 tgggattcgaacccatgccctttcggaccagtacctgaaactggcgccttagaccaactcggccatct 55899137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 20144869 - 20144905
Alignment:
Q  412 tgttgagagtgggatttgaacccacgccctttcggac 448  Q
    ||||||||||||||||||||||||| |||||||||||    
T  20144869 tgttgagagtgggatttgaacccacaccctttcggac 20144905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 487
Target Start/End: Complemental strand, 228936 - 228865
Alignment:
Q  419 agtgggatttgaacccacgcc--ctttcg--gaccagaaccttaatctggcgccttagaccaactcggccatc 487  Q
    |||||||||||||||||||||  ||||||  ||||||||| | | |||||||||||||||| |||||||||||    
T  228936 agtgggatttgaacccacgccctctttcgaagaccagaacttgagtctggcgccttagacc-actcggccatc 228865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 487
Target Start/End: Complemental strand, 240481 - 240410
Alignment:
Q  419 agtgggatttgaacccacgcc--ctttcg--gaccagaaccttaatctggcgccttagaccaactcggccatc 487  Q
    |||||||||||||||||||||  ||||||  ||||||||| | | |||||||||||||||| |||||||||||    
T  240481 agtgggatttgaacccacgccctctttcgaagaccagaacttgagtctggcgccttagacc-actcggccatc 240410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 487
Target Start/End: Original strand, 47819297 - 47819368
Alignment:
Q  419 agtgggatttgaacccacgcc--ctttcg--gaccagaaccttaatctggcgccttagaccaactcggccatc 487  Q
    |||||||||||||||||||||  ||||||  ||||||||| | | |||||||||||||||| |||||||||||    
T  47819297 agtgggatttgaacccacgccctctttcgaagaccagaacttgagtctggcgccttagacc-actcggccatc 47819368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 398 - 492
Target Start/End: Original strand, 21127720 - 21127814
Alignment:
Q  398 aaaaataaaagaaatgttgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaac 492  Q
    ||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21127720 aaaaaaaatagaaatgttgacagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatatcaac 21127814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 411 - 492
Target Start/End: Original strand, 43291862 - 43291943
Alignment:
Q  411 atgttgagagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaac 492  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43291862 atgttgacagtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatatcaac 43291943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 420 - 485
Target Start/End: Original strand, 42085063 - 42085127
Alignment:
Q  420 gtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggcca 485  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  42085063 gtgggatttgaacccacgccctttcggaccagagcctaaatctggcgccttagacc-actcggcca 42085127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 492
Target Start/End: Original strand, 21126510 - 21126602
Alignment:
Q  404 aaaagaaatgttgagagtgggatttga-----acccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatctcaac 492  Q
    |||||||||||||||||||||||| ||     |||||| |||||| ||| ||||||||||||| || ||||||| ||||||||| |||||||||    
T  21126510 aaaagaaatgttgagagtgggattagagaagaacccactcccttt-ggatcagaaccttaatccggtgccttaggccaactcggtcatctcaac 21126602  T

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Target: scaffold0648 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0648
Description:

Target: scaffold0648; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 420 - 485
Target Start/End: Original strand, 7753 - 7817
Alignment:
Q  420 gtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggcca 485  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  7753 gtgggatttgaacccacgccctttcggaccagagcctaaatctggcgccttagacc-actcggcca 7817  T

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Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 420 - 485
Target Start/End: Original strand, 33802591 - 33802655
Alignment:
Q  420 gtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggcca 485  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  33802591 gtgggatttgaacccacgccctttcggaccagagcctaaatctggcgccttagacc-actcggcca 33802655  T

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Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 420 - 485
Target Start/End: Complemental strand, 12974324 - 12974260
Alignment:
Q  420 gtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggcca 485  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  12974324 gtgggatttgaacccacgccctttcggaccagagcctaaatctggcgccttagacc-actcggcca 12974260  T

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Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 420 - 485
Target Start/End: Complemental strand, 40579754 - 40579690
Alignment:
Q  420 gtgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggcca 485  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  40579754 gtgggatttgaacccacgccctttcggaccagagcctaaatctggcgccttagacc-actcggcca 40579690  T

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Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 487
Target Start/End: Complemental strand, 17537538 - 17537467
Alignment:
Q  419 agtgggatttgaacccacgcc--ctttcg--gaccagaaccttaatctggcgccttagaccaactcggccatc 487  Q
    |||||||||||||||||||||  ||||||  ||||||||| | | |||||||||||||||| |||||||||||    
T  17537538 agtgggatttgaacccacgccctctttcgaagaccagaacttgagtctggcgccttagacc-actcggccatc 17537467  T

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Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 421 - 488
Target Start/End: Original strand, 30809870 - 30809937
Alignment:
Q  421 tgggatttgaacccacgccctttcggaccagaaccttaatctggcgccttagaccaactcggccatct 488  Q
    ||||||| ||||||| ||||||||||||||| |||| || ||||||||||||||||||||||||||||    
T  30809870 tgggattcgaacccatgccctttcggaccagtacctgaaactggcgccttagaccaactcggccatct 30809937  T

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