View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4445_high_48 (Length: 333)
Name: NF4445_high_48
Description: NF4445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4445_high_48 |
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Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 9 - 319
Target Start/End: Original strand, 41052333 - 41052643
Alignment:
| Q |
9 |
agcacagagacttgctacgatagctaaccgatgtttagttaaaaacccgaagaatcggccaaagatgagcgaggttttggaaatggtgaatggaatagta |
108 |
Q |
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| T |
41052333 |
agcacagagacttgctacgatagctaaccgatgtttagttaaaaacccgaagaatcggccaaagatgagcgaggttttggaaatggtgaatggaatagta |
41052432 |
T |
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| Q |
109 |
gaatcatcatccgacactaattcacaactacccttgaagaatgtttcgagaatagaagtttctcatgaaactgaaatgaggaacacaaagaagcggacca |
208 |
Q |
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| T |
41052433 |
gaatcatcatccgacactaattcacaactacccttgaagaatgtttcgagaatagaagtttctcatgaaactgaaatgaggaacacaaagaagcggacca |
41052532 |
T |
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| Q |
209 |
tggatcagaagcctagagaaagtaattggttcgttaggttgtggagaccaaagcttataagaacatgaaatacacagtgattattgagcctgaagtgaaa |
308 |
Q |
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| T |
41052533 |
tggatcagaagcctagagaaagtaattggttcgttaggttgtggagaccaaagcttataagaacatgaaatacacagtgattattgagcctgaagtgaaa |
41052632 |
T |
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| Q |
309 |
tggttgtcagt |
319 |
Q |
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| T |
41052633 |
tggttgtcagt |
41052643 |
T |
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