View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4445_high_50 (Length: 327)
Name: NF4445_high_50
Description: NF4445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4445_high_50 |
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Alignment Details
Target: chr6 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 7 - 319
Target Start/End: Original strand, 26612231 - 26612542
Alignment:
| Q |
7 |
attacaataatttggtgttataagaa-tgtcttgtaaatctcaattgatattgatcccttcttcaatataaagatttcccatataaacaataaacattgt |
105 |
Q |
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||||||||||||| ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |
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| T |
26612231 |
attacaataattttgtgctataagaaatgtcttgtaaatcttaattgatattgatcccttcttcaatataaagatttcgcatataaacaataaacgttgt |
26612330 |
T |
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| Q |
106 |
gttctaaaggttcgatttctcagcccaatttgccttcaatatatcttattgatcatatgaaacatttataagtatcataatcattcacattacaatatcc |
205 |
Q |
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||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||| |||||||||||||||| ||||||| |||||||||||| |
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| T |
26612331 |
gttctaaaggttcgatttctcagcccaatttaccttcaattt--cttattgatcatatgaaaaatttataagtatcatattcattcatattacaatatcc |
26612428 |
T |
|
| Q |
206 |
accatattttttgcaagatcatatgtattcgagagaaaagattattggaggttagaattagaagatagtttttaaatgctttctcttatcaaatatatat |
305 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26612429 |
accatattttttgcaagatcatatgtattcgagagaagagattattggaggttagaattagaagatagtttttaaatgctttctcttatcaaatatatat |
26612528 |
T |
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| Q |
306 |
caaactttcttatc |
319 |
Q |
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|||||||||||||| |
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| T |
26612529 |
caaactttcttatc |
26612542 |
T |
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