View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4445_high_95 (Length: 251)
Name: NF4445_high_95
Description: NF4445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4445_high_95 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 24 - 251
Target Start/End: Complemental strand, 45469643 - 45469416
Alignment:
| Q |
24 |
agttagtcaaatttaaatttgaataggaagtataaacctggagaacaataggtaaattactttctatgacaacaccataatcaaactacatatttcatca |
123 |
Q |
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| T |
45469643 |
agttagtcaaatttaaatttgaataggaagtataaacctggagaacaataggtaaattactttctatgacaacaccataatcaaactacatatttcatca |
45469544 |
T |
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| Q |
124 |
actttagtaaaccccaaccaaggctagagccaaattttagaaacagttccgagttcattatctaacnnnnnnngttgcatacattattaaaatcttccca |
223 |
Q |
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| T |
45469543 |
actttagtaaactccaaccaaggctagagccaaattttagaaactgttccgagttcattatctaacaaaaaaagttgcatacattattaaaatcttccca |
45469444 |
T |
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| Q |
224 |
caaatccctttcacaattgttggcttat |
251 |
Q |
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| T |
45469443 |
caaatccctttcacaattgttggcttat |
45469416 |
T |
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