View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4445_low_103 (Length: 254)
Name: NF4445_low_103
Description: NF4445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4445_low_103 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 17 - 254
Target Start/End: Original strand, 41182193 - 41182430
Alignment:
| Q |
17 |
aggcaggatcaccaaatttgtcaatcaatcaagtaattaacaaatatgagtagagttctctatgtttgactatactccacttgttttacaagcaactatt |
116 |
Q |
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| T |
41182193 |
aggcaggatcaccaaatttgtcaatcaatcaagtaattaacaaatatgagtagagttctctatgtttgactatactccacttgttttacaagcaactatt |
41182292 |
T |
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| Q |
117 |
actaatcatagcttaactaaaatatttcataaaaaataccataattagtattaaaagttaaaactaataatgtccatttcattggagaacgacaaattaa |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
41182293 |
actaatcatagcttaactaaaatatttcataaaaaataccataattagtattaaaagttaaaactactaatgtccatttcattggagaacgacaaattaa |
41182392 |
T |
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| Q |
217 |
gtacgatcttacttacatcacactctctctttggcttt |
254 |
Q |
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| T |
41182393 |
gtacgatcttacttacatcacactctctctttggcttt |
41182430 |
T |
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