View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4445_low_131 (Length: 237)
Name: NF4445_low_131
Description: NF4445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4445_low_131 |
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Alignment Details
Target: chr5 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 2386772 - 2386994
Alignment:
| Q |
1 |
aatggacctatgatattgttggatctaaggctcaatttttgcaaccctttgattttactaattgtattagcaggaattgtaccattaaatccaaaccctg |
100 |
Q |
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| T |
2386772 |
aatggacctatgatattgttggatctaaggctcaatttttgcaaccctttgattttactaattgtattagcaggaattgtaccattaaatccaaaccctg |
2386871 |
T |
|
| Q |
101 |
gcaaccgaatcacgataatttgagacctatcttcactacaaattacaccattccaactagtacaaattgaagaattcacattccaattcaaaggcttaaa |
200 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2386872 |
gcaaccgaatcgcgataatttgagacctatcttcactacaaattacaccattccaactagtacaaattgaagaattcacattccaattcaaaggcttaaa |
2386971 |
T |
|
| Q |
201 |
aggtggtaatttttgaacaaact |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
2386972 |
aggtggtaatttttgaacaaact |
2386994 |
T |
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