View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4445_low_146 (Length: 222)
Name: NF4445_low_146
Description: NF4445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4445_low_146 |
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Alignment Details
Target: chr3 (Bit Score: 107; Significance: 8e-54; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 89 - 207
Target Start/End: Complemental strand, 3595172 - 3595054
Alignment:
| Q |
89 |
gtgaaatcactttcactttacatgattttgaagaatcttctatattatattctctctcctttataaggaatcttctatctattattcgcatttgcttgtc |
188 |
Q |
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| T |
3595172 |
gtgaaatcactttcactttacatgattttgaagaatcttctatattatattctctctcctttataaggaatcttctatctattattcgcatttgtttgtc |
3595073 |
T |
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| Q |
189 |
tattagctgttactaaatg |
207 |
Q |
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||||||| | ||||||||| |
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| T |
3595072 |
tattagccgatactaaatg |
3595054 |
T |
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