View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4445_low_149 (Length: 218)
Name: NF4445_low_149
Description: NF4445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4445_low_149 |
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Alignment Details
Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 9400988 - 9401174
Alignment:
| Q |
17 |
attctgtatgttcgagggaaattcaatcaaccatcatttaatcaaccatcatgaagtagtgtgcagaaacggttgattatatagttatttttgtaaataa |
116 |
Q |
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| T |
9400988 |
attctctatgttcaagggaaattcaatcaaccatcatttaatcaaccatcataaagtagtgtacagaaccggttgattatatagttatttttgtaaataa |
9401087 |
T |
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| Q |
117 |
ttcttttagaattttctctccatttgctacataaatatgaaagg-nnnnnnnngttcttcaaatgaaaaaattgttttaattagaaa |
202 |
Q |
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| T |
9401088 |
ttcttttagaattttctctccatttgctacataaatatgaaaggaaaaaaaaagttcttcaaatgaaaaaattgttttaattagaaa |
9401174 |
T |
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