View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4445_low_155 (Length: 208)
Name: NF4445_low_155
Description: NF4445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4445_low_155 |
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Alignment Details
Target: chr2 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 38919569 - 38919744
Alignment:
| Q |
11 |
gagtgagaagaatgagtgcaagaggtgttgtagtggtgagtgccatgttggtaagttagtgaaggagaattaagatttgaagatgaggtttggtgagtat |
110 |
Q |
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| T |
38919569 |
gagtgagaagaatgagtgcaagaggtgttgtagtggtgagtgccatgttggtaagttagtgaaggagaattaagatttgaagatgaggtttggtgagtat |
38919668 |
T |
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| Q |
111 |
gtggagaggtggagaggggttttatttggagaggaatattattaataaggtaatttggttgagaatttgttggcat |
186 |
Q |
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| T |
38919669 |
gtggagaggtggagaggggttttatttggagaggaatattattaataaggtaatttggttgagaatttgttggcat |
38919744 |
T |
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