View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4445_low_78 (Length: 298)
Name: NF4445_low_78
Description: NF4445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4445_low_78 |
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Alignment Details
Target: chr8 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 63 - 260
Target Start/End: Original strand, 20900407 - 20900604
Alignment:
| Q |
63 |
tggctcttcacgctaaaaagatgttaattggtattttgaatgtattgaaagctaaattcatccccatgataccaattttatacaatgaggccggtggtga |
162 |
Q |
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| T |
20900407 |
tggctcttcacgccaaaaaattgttaattggtattttgaatgtattgaaagctaaattcatccccacgataccaattttatacaatgaggccggtggtga |
20900506 |
T |
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| Q |
163 |
aaggaacatgtaaagacaatatctgataacctttcatgtctcgtaatgaaggttgtgatgtagatttacattcaaatagtcagaaatattcaattatg |
260 |
Q |
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| T |
20900507 |
aaggaacgtgtaaagacaatatctgataacctttcatatctcgtaatgaaggttgtgatgtagatttacattcaaatagtcagaaatattcaattatg |
20900604 |
T |
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